TogoWS: world method list

This database contains a list of methods provided by worldwide bioinformatics web services including BioMoby with assignments of the category and input/output data types.
4172 Found
Columns ... 1 2 3 4 .. 279

Provider portType Operation TogoWS category Moby service class Doc description

DDBJ

ClustalW

analyzeParam

Multiple Alignment > ClustalW

Multiple_Sequence_Comparison

Execute ClustalW with multiple sequences and parameter
Show
analyzeParam

DDBJ

 

ClustalW

 

analyzeParam

 

Multiple Alignment > ClustalW

 

Multiple_Sequence_Comparison

 

Execute ClustalW with parameter

 

Execute ClustalW with multiple sequences and parameter

 

-

 

query(xsd:string), param(xsd:string)

 

collection of sequences(moby:GenericSequence), param(xsd:string)

 

-

 

-

 

Result(xsd:string)

 

alignment(moby:Clustalw_Text)

 

-

 

-

 

-

 

-

 

-

 

-

 

16

 

DDBJ

ClustalW

analyzeParamAsync

Multiple Alignment > ClustalW

Multiple_Sequence_Comparison

Execute ClustalW asynchronously with multiple sequences and parameter
Show
analyzeParamAsync

DDBJ

 

ClustalW

 

analyzeParamAsync

 

Multiple Alignment > ClustalW

 

Multiple_Sequence_Comparison

 

Execute ClustalW with parameter

 

Execute ClustalW asynchronously with multiple sequences and parameter

 

-

 

query(xsd:string), param(xsd:string)

 

collection of sequences(moby:GenericSequence), param(xsd:string)

 

-

 

-

 

Result(xsd:string)

 

alignment(moby:Clustalw_Text)

 

-

 

-

 

-

 

-

 

-

 

-

 

17

 

DDBJ

ClustalW

analyzeSimple

Multiple Alignment > ClustalW

Multiple_Sequence_Comparison

Execute ClustalW with multiple sequences
Show
analyzeSimple

DDBJ

 

ClustalW

 

analyzeSimple

 

Multiple Alignment > ClustalW

 

Multiple_Sequence_Comparison

 

Execute ClustalW

 

Execute ClustalW with multiple sequences

 

-

 

query(xsd:string)

 

collection of sequences(moby:GenericSequence)

 

-

 

-

 

Result(xsd:string)

 

alignment(moby:Clustalw_Text)

 

-

 

-

 

-

 

-

 

-

 

-

 

18

 

DDBJ

ClustalW

analyzeSimpleAsync

Multiple Alignment > ClustalW

Multiple_Sequence_Comparison

Execute ClustalW asynchronously with multiple sequences
Show
analyzeSimpleAsync

DDBJ

 

ClustalW

 

analyzeSimpleAsync

 

Multiple Alignment > ClustalW

 

Multiple_Sequence_Comparison

 

Execute ClustalW

 

Execute ClustalW asynchronously with multiple sequences

 

-

 

query(xsd:string)

 

collection of sequences(moby:GenericSequence)

 

-

 

-

 

Result(xsd:string)

 

alignment(moby:Clustalw_Text)

 

-

 

-

 

-

 

-

 

-

 

-

 

19

 

DDBJ

DDBJ

countBasePair

Database Search > DDBJ

Database

Get number and ratio of each base such as A,T,G,C by accession number
Show
countBasePair

DDBJ

 

DDBJ

 

countBasePair

 

Database Search > DDBJ

 

Database

 

Count base pair of the specified accession number

 

Get number and ratio of each base such as A,T,G,C by accession number

 

-

 

accession(xsd:string)

 

id(moby:Object)

 

-

 

-

 

Result(xsd:string)

 

Result(moby:text-formated)

 

-

 

-

 

-

 

-

 

-

 

-

 

20

 

DDBJ

DDBJ

getAllFeatures

Database Search > DDBJ

Database

-
Show
getAllFeatures

DDBJ

 

DDBJ

 

getAllFeatures

 

Database Search > DDBJ

 

Database

 

Get the feature type contains specified DDBJ Entry

 

-

 

-

 

accession(xsd:string)

 

id(moby:Object)

 

-

 

-

 

Result(xsd:string)

 

Result(moby:text-formated)

 

-

 

-

 

-

 

-

 

-

 

-

 

21

 

DDBJ

DDBJ

getFFEntry

Database Search > DDBJ

Database

Get DDBJ entry by accession number with flat file format
Show
getFFEntry

DDBJ

 

DDBJ

 

getFFEntry

 

Database Search > DDBJ

 

Database

 

Get Flat File DDBJ Entry by accession number

 

Get DDBJ entry by accession number with flat file format

 

-

 

accession(xsd:string)

 

id(moby:Object)

 

-

 

-

 

Result(xsd:string)

 

Result(moby:text-formated)

 

-

 

-

 

-

 

-

 

-

 

-

 

22

 

DDBJ

DDBJ

getFeatureInfo

Database Search > DDBJ

Database

Get the detailed feature information of a DDBJ entry with tab delimitedformat. The format has two columns. The first column is qualifier nameand the second one is qualifier value
Show
getFeatureInfo

DDBJ

 

DDBJ

 

getFeatureInfo

 

Database Search > DDBJ

 

Database

 

Get the detail Feature Information of DDBJ Entry

 

Get the detailed feature information of a DDBJ entry with tab delimitedformat. The format has two columns. The first column is qualifier nameand the second one is qualifier value

 

-

 

accession(xsd:string), feature(xsd:string)

 

id(moby:Object), feature(xsd:string)

 

-

 

-

 

Result(xsd:string)

 

Result(moby:text-formated)

 

-

 

-

 

-

 

-

 

-

 

-

 

23

 

DDBJ

DDBJ

getRelatedFeatures

Database Search > DDBJ

Database

Get related features between start and stop position in a DDBJ entry
Show
getRelatedFeatures

DDBJ

 

DDBJ

 

getRelatedFeatures

 

Database Search > DDBJ

 

Database

 

Get related feature contains specified DDBJ location

 

Get related features between start and stop position in a DDBJ entry

 

-

 

accession(xsd:string), start(xsd:string), stop(xsd:string)

 

id(moby:Object), start(moby:Integer), stop(moby:Integer)

 

-

 

-

 

Result(xsd:string)

 

Result(moby:text-formated)

 

-

 

-

 

-

 

-

 

-

 

-

 

24

 

DDBJ

DDBJ

getRelatedFeaturesSeq

Database Search > DDBJ

Database

Get related features and DNA sequence between start and stop position in a DDBJ entry
Show
getRelatedFeaturesSeq

DDBJ

 

DDBJ

 

getRelatedFeaturesSeq

 

Database Search > DDBJ

 

Database

 

Get relatedfeatures and sequence contains specified DDBJ location

 

Get related features and DNA sequence between start and stop position in a DDBJ entry

 

-

 

accession(xsd:string), start(xsd:string), stop(xsd:string)

 

id(moby:Object), start(moby:Integer), stop(moby:Integer)

 

-

 

-

 

Result(xsd:string)

 

Result(moby:text-formated)

 

-

 

-

 

-

 

-

 

-

 

-

 

25

 

DDBJ

DDBJ

getXMLEntry

Database Search > DDBJ

Database

Get DDBJ entry with XML format by accession number
Show
getXMLEntry

DDBJ

 

DDBJ

 

getXMLEntry

 

Database Search > DDBJ

 

Database

 

Get XML DDBJ Entry by accession number

 

Get DDBJ entry with XML format by accession number

 

-

 

accession(xsd:string)

 

id(moby:Object)

 

-

 

-

 

Result(xsd:string)

 

Result(moby:text-xml)

 

-

 

-

 

-

 

-

 

-

 

-

 

26

 

DDBJ

Ensembl

getGeneInfo

Database Search > Ensembl

Database

Get detailed gene information
Show
getGeneInfo

DDBJ

 

Ensembl

 

getGeneInfo

 

Database Search > Ensembl

 

Database

 

get gene information

 

Get detailed gene information

 

-

 

geneId(xsd:string)

 

id(moby:Object)

 

-

 

-

 

Result(xsd:string)

 

Result(moby:text-formated)

 

-

 

-

 

-

 

-

 

-

 

-

 

27

 

DDBJ

Ensembl

getGeneInfoAsync

Database Search > Ensembl

Database

Get detailed gene information asynchronously
Show
getGeneInfoAsync

DDBJ

 

Ensembl

 

getGeneInfoAsync

 

Database Search > Ensembl

 

Database

 

get gene information

 

Get detailed gene information asynchronously

 

-

 

geneId(xsd:string)

 

id(moby:Object)

 

-

 

-

 

Result(xsd:string)

 

Result(moby:text-formated)

 

-

 

-

 

-

 

-

 

-

 

-

 

28

 

DDBJ

Ensembl

getGeneInfoChromosome

Database Search > Ensembl

Database

Get detailed gene information
Show
getGeneInfoChromosome

DDBJ

 

Ensembl

 

getGeneInfoChromosome

 

Database Search > Ensembl

 

Database

 

get gene information

 

Get detailed gene information

 

-

 

geneId(xsd:string), chromosome(xsd:string), organism(xsd:string)

 

id(moby:Object), chromosome(xsd:string), organism(xsd:string)

 

-

 

-

 

Result(xsd:string)

 

Result(moby:text-formated)

 

-

 

-

 

-

 

-

 

-

 

-

 

29

 

DDBJ

Ensembl

getGeneInfoChromosomeAsync

Database Search > Ensembl

Database

Get detailed gene information asynchronously
Show
getGeneInfoChromosomeAsync

DDBJ

 

Ensembl

 

getGeneInfoChromosomeAsync

 

Database Search > Ensembl

 

Database

 

get gene information

 

Get detailed gene information asynchronously

 

-

 

geneId(xsd:string), chromosome(xsd:string), organism(xsd:string)

 

id(moby:Object), chromosome(xsd:string), organism(xsd:string)

 

-

 

-

 

Result(xsd:string)

 

Result(moby:text-formated)

 

-

 

-

 

-

 

-

 

-

 

-

 

30

 
4172 Found
1 2 3 4 .. 279

Copyright (C) 2008 DBCLS