TogoWS: domestic method list

This database contains a list of methods provided by Japanese bioinformatics web services (DDBJ, KEGG, PDBj) with sample codes for Ruby, Perl, Python and Java languages.
368 Found
Columns ... 1 2 3 4 .. 25

Method name Description Provider Input Output

DdbjBlastSearchParam

description of DdbjBlastSearchParam

DDBJ

string program, string database, string query, string param

string
Show
DdbjBlastSearchParam

DdbjBlastSearchParam

 

description of DdbjBlastSearchParam

 

DDBJ

 

string program, string database, string query, string param

 

string

 

program="blastp", database="SWISS", query="MSSRIARALALVVTLLHLTRLALSTCPAACHCPLEAPKCAPGVGLVRDGCGCCKVCAKQL", param="-b 5 -m 7"

 

output sample

 

http://togows.dbcls.jp/soap/clients/ddbj/ruby/DdbjBlastSearchParam.rb

 

http://togows.dbcls.jp/soap/clients/ddbj/perl/DdbjBlastSearchParam.pl

 

http://togows.dbcls.jp/soap/clients/ddbj/python/DdbjBlastSearchParam.py

 

http://togows.dbcls.jp/soap/clients/ddbj/java/DdbjBlastSearchParam.java

 

16

 

DdbjBlastSearchParamAsync

description of DdbjBlastSearchParamAsync

DDBJ

string program, string database, string query, string param

string
Show
DdbjBlastSearchParamAsync

DdbjBlastSearchParamAsync

 

description of DdbjBlastSearchParamAsync

 

DDBJ

 

string program, string database, string query, string param

 

string

 

program="blastp", database="SWISS", query="MSSRIARALALVVTLLHLTRLALSTCPAACHCPLEAPKCAPGVGLVRDGCGCCKVCAKQL", param="-b 5 -m 7"

 

output sample

 

http://togows.dbcls.jp/soap/clients/ddbj/ruby/DdbjBlastSearchParamAsync.rb

 

http://togows.dbcls.jp/soap/clients/ddbj/perl/DdbjBlastSearchParamAsync.pl

 

http://togows.dbcls.jp/soap/clients/ddbj/python/DdbjBlastSearchParamAsync.py

 

http://togows.dbcls.jp/soap/clients/ddbj/java/DdbjBlastSearchParamAsync.java

 

17

 

DdbjBlastSearchParamAsyncResult

description of DdbjBlastSearchParamAsyncResult

DDBJ

string jobid

string
Show
DdbjBlastSearchParamAsyncResult

DdbjBlastSearchParamAsyncResult

 

description of DdbjBlastSearchParamAsyncResult

 

DDBJ

 

string jobid

 

string

 

-

 

output sample

 

http://togows.dbcls.jp/soap/clients/ddbj/ruby/DdbjBlastSearchParamAsyncResult.rb

 

http://togows.dbcls.jp/soap/clients/ddbj/perl/DdbjBlastSearchParamAsyncResult.pl

 

http://togows.dbcls.jp/soap/clients/ddbj/python/DdbjBlastSearchParamAsyncResult.py

 

http://togows.dbcls.jp/soap/clients/ddbj/java/DdbjBlastSearchParamAsyncResult.java

 

18

 

DdbjBlastSearchSimple

description of DdbjBlastSearchSimple

DDBJ

string program, string database, string query

string
Show
DdbjBlastSearchSimple

DdbjBlastSearchSimple

 

description of DdbjBlastSearchSimple

 

DDBJ

 

string program, string database, string query

 

string

 

program="blastp", database="SWISS", query="MSSRIARALALVVTLLHLTRLALSTCPAACHCPLEAPKCAPGVGLVRDGCGCCKVCAKQL"

 

output sample

 

http://togows.dbcls.jp/soap/clients/ddbj/ruby/DdbjBlastSearchSimple.rb

 

http://togows.dbcls.jp/soap/clients/ddbj/perl/DdbjBlastSearchSimple.pl

 

http://togows.dbcls.jp/soap/clients/ddbj/python/DdbjBlastSearchSimple.py

 

http://togows.dbcls.jp/soap/clients/ddbj/java/DdbjBlastSearchSimple.java

 

19

 

DdbjBlastSearchSimpleAsync

description of DdbjBlastSearchSimpleAsync

DDBJ

string program, string database, string query

string
Show
DdbjBlastSearchSimpleAsync

DdbjBlastSearchSimpleAsync

 

description of DdbjBlastSearchSimpleAsync

 

DDBJ

 

string program, string database, string query

 

string

 

program="blastp", database="SWISS", query="MSSRIARALALVVTLLHLTRLALSTCPAACHCPLEAPKCAPGVGLVRDGCGCCKVCAKQL"

 

output sample

 

http://togows.dbcls.jp/soap/clients/ddbj/ruby/DdbjBlastSearchSimpleAsync.rb

 

http://togows.dbcls.jp/soap/clients/ddbj/perl/DdbjBlastSearchSimpleAsync.pl

 

http://togows.dbcls.jp/soap/clients/ddbj/python/DdbjBlastSearchSimpleAsync.py

 

http://togows.dbcls.jp/soap/clients/ddbj/java/DdbjBlastSearchSimpleAsync.java

 

20

 

DdbjBlastSearchSimpleAsyncResult

description of DdbjBlastSearchSimpleAsyncResult

DDBJ

string jobid

string
Show
DdbjBlastSearchSimpleAsyncResult

DdbjBlastSearchSimpleAsyncResult

 

description of DdbjBlastSearchSimpleAsyncResult

 

DDBJ

 

string jobid

 

string

 

-

 

output sample

 

http://togows.dbcls.jp/soap/clients/ddbj/ruby/DdbjBlastSearchSimpleAsyncResult.rb

 

http://togows.dbcls.jp/soap/clients/ddbj/perl/DdbjBlastSearchSimpleAsyncResult.pl

 

http://togows.dbcls.jp/soap/clients/ddbj/python/DdbjBlastSearchSimpleAsyncResult.py

 

http://togows.dbcls.jp/soap/clients/ddbj/java/DdbjBlastSearchSimpleAsyncResult.java

 

21

 

DdbjClustalwAnalyzeParam

description of DdbjClustalwAnalyzeParam

DDBJ

string query, string param

string
Show
DdbjClustalwAnalyzeParam

DdbjClustalwAnalyzeParam

 

description of DdbjClustalwAnalyzeParam

 

DDBJ

 

string query, string param

 

string

 

query="@file", param="-align -matrix=blosum -gapdist=8 -maxdiv=40 -outorder=aligned -pwmatrix=blosum"

 

output sample

 

http://togows.dbcls.jp/soap/clients/ddbj/ruby/DdbjClustalwAnalyzeParam.rb

 

http://togows.dbcls.jp/soap/clients/ddbj/perl/DdbjClustalwAnalyzeParam.pl

 

http://togows.dbcls.jp/soap/clients/ddbj/python/DdbjClustalwAnalyzeParam.py

 

http://togows.dbcls.jp/soap/clients/ddbj/java/DdbjClustalwAnalyzeParam.java

 

22

 

DdbjClustalwAnalyzeParamAsync

description of DdbjClustalwAnalyzeParamAsync

DDBJ

string query, string param

string
Show
DdbjClustalwAnalyzeParamAsync

DdbjClustalwAnalyzeParamAsync

 

description of DdbjClustalwAnalyzeParamAsync

 

DDBJ

 

string query, string param

 

string

 

query="@file", param="-align -matrix=blosum -gapdist=8 -maxdiv=40 -outorder=aligned -pwmatrix=blosum"

 

output sample

 

http://togows.dbcls.jp/soap/clients/ddbj/ruby/DdbjClustalwAnalyzeParamAsync.rb

 

http://togows.dbcls.jp/soap/clients/ddbj/perl/DdbjClustalwAnalyzeParamAsync.pl

 

http://togows.dbcls.jp/soap/clients/ddbj/python/DdbjClustalwAnalyzeParamAsync.py

 

http://togows.dbcls.jp/soap/clients/ddbj/java/DdbjClustalwAnalyzeParamAsync.java

 

23

 

DdbjClustalwAnalyzeParamAsyncResult

description of DdbjClustalwAnalyzeParamAsyncResult

DDBJ

string jobid

string
Show
DdbjClustalwAnalyzeParamAsyncResult

DdbjClustalwAnalyzeParamAsyncResult

 

description of DdbjClustalwAnalyzeParamAsyncResult

 

DDBJ

 

string jobid

 

string

 

-

 

output sample

 

http://togows.dbcls.jp/soap/clients/ddbj/ruby/DdbjClustalwAnalyzeParamAsyncResult.rb

 

http://togows.dbcls.jp/soap/clients/ddbj/perl/DdbjClustalwAnalyzeParamAsyncResult.pl

 

http://togows.dbcls.jp/soap/clients/ddbj/python/DdbjClustalwAnalyzeParamAsyncResult.py

 

http://togows.dbcls.jp/soap/clients/ddbj/java/DdbjClustalwAnalyzeParamAsyncResult.java

 

24

 

DdbjClustalwAnalyzeSimple

description of DdbjClustalwAnalyzeSimple

DDBJ

string query

string
Show
DdbjClustalwAnalyzeSimple

DdbjClustalwAnalyzeSimple

 

description of DdbjClustalwAnalyzeSimple

 

DDBJ

 

string query

 

string

 

query="> RABSTOUT rabbit Guinness receptor
LKMHLMGHLKMGLKMGLKGMHLMHLKHMHLMTYTYTTYRRWPLWMWLPDFGHAS
ADSCVCAHGFAVCACFAHFDVCFGAVCFHAVCFAHVCFAAAVCFAVCAC
> MUSNOSE mouse nose drying factor
mhkmmhkgmkhmhgmhmhglhmkmhlkmgkhmgkmkytytytryrwtqtqwtwyt
fdgfdsgafdagfdgfsagdfavdfdvgavfsvfgvdfsvdgvagvfdv
> HSHEAVEN human Guinness receptor repeat
mhkmmhkgmkhmhgmhmhg lhmkmhlkmgkhmgkmk ytytytryrwtqtqwtwyt
fdgfdsgafdagfdgfsag dfavdfdvgavfsvfgv dfsvdgvagvfdv
mhkmmhkgmkhmhgmhmhg lhmkmhlkmgkhmgkmk ytytytryrwtqtqwtwyt
fdgfdsgafdagfdgfsag dfavdfdvgavfsvfgv dfsvdgvagvfdv
"

 

output sample

 

http://togows.dbcls.jp/soap/clients/ddbj/ruby/DdbjClustalwAnalyzeSimple.rb

 

http://togows.dbcls.jp/soap/clients/ddbj/perl/DdbjClustalwAnalyzeSimple.pl

 

http://togows.dbcls.jp/soap/clients/ddbj/python/DdbjClustalwAnalyzeSimple.py

 

http://togows.dbcls.jp/soap/clients/ddbj/java/DdbjClustalwAnalyzeSimple.java

 

25

 

DdbjClustalwAnalyzeSimpleAsync

description of DdbjClustalwAnalyzeSimpleAsync

DDBJ

string query

string
Show
DdbjClustalwAnalyzeSimpleAsync

DdbjClustalwAnalyzeSimpleAsync

 

description of DdbjClustalwAnalyzeSimpleAsync

 

DDBJ

 

string query

 

string

 

query="@file"

 

output sample

 

http://togows.dbcls.jp/soap/clients/ddbj/ruby/DdbjClustalwAnalyzeSimpleAsync.rb

 

http://togows.dbcls.jp/soap/clients/ddbj/perl/DdbjClustalwAnalyzeSimpleAsync.pl

 

http://togows.dbcls.jp/soap/clients/ddbj/python/DdbjClustalwAnalyzeSimpleAsync.py

 

http://togows.dbcls.jp/soap/clients/ddbj/java/DdbjClustalwAnalyzeSimpleAsync.java

 

26

 

DdbjClustalwAnalyzeSimpleAsyncResult

description of DdbjClustalwAnalyzeSimpleAsyncResult

DDBJ

string jobid

string
Show
DdbjClustalwAnalyzeSimpleAsyncResult

DdbjClustalwAnalyzeSimpleAsyncResult

 

description of DdbjClustalwAnalyzeSimpleAsyncResult

 

DDBJ

 

string jobid

 

string

 

-

 

output sample

 

http://togows.dbcls.jp/soap/clients/ddbj/ruby/DdbjClustalwAnalyzeSimpleAsyncResult.rb

 

http://togows.dbcls.jp/soap/clients/ddbj/perl/DdbjClustalwAnalyzeSimpleAsyncResult.pl

 

http://togows.dbcls.jp/soap/clients/ddbj/python/DdbjClustalwAnalyzeSimpleAsyncResult.py

 

http://togows.dbcls.jp/soap/clients/ddbj/java/DdbjClustalwAnalyzeSimpleAsyncResult.java

 

27

 

DdbjDdbjCountBasePair

description of DdbjDdbjCountBasePair

DDBJ

string accession

string
Show
DdbjDdbjCountBasePair

DdbjDdbjCountBasePair

 

description of DdbjDdbjCountBasePair

 

DDBJ

 

string accession

 

string

 

accession="AB000100"

 

output sample

 

http://togows.dbcls.jp/soap/clients/ddbj/ruby/DdbjDdbjCountBasePair.rb

 

http://togows.dbcls.jp/soap/clients/ddbj/perl/DdbjDdbjCountBasePair.pl

 

http://togows.dbcls.jp/soap/clients/ddbj/python/DdbjDdbjCountBasePair.py

 

http://togows.dbcls.jp/soap/clients/ddbj/java/DdbjDdbjCountBasePair.java

 

28

 

DdbjDdbjGetAllFeatures

description of DdbjDdbjGetAllFeatures

DDBJ

string accession

string
Show
DdbjDdbjGetAllFeatures

DdbjDdbjGetAllFeatures

 

description of DdbjDdbjGetAllFeatures

 

DDBJ

 

string accession

 

string

 

accession="AB000050"

 

output sample

 

http://togows.dbcls.jp/soap/clients/ddbj/ruby/DdbjDdbjGetAllFeatures.rb

 

http://togows.dbcls.jp/soap/clients/ddbj/perl/DdbjDdbjGetAllFeatures.pl

 

http://togows.dbcls.jp/soap/clients/ddbj/python/DdbjDdbjGetAllFeatures.py

 

http://togows.dbcls.jp/soap/clients/ddbj/java/DdbjDdbjGetAllFeatures.java

 

29

 

DdbjDdbjGetFeatureInfo

description of DdbjDdbjGetFeatureInfo

DDBJ

string accession, string feature

string
Show
DdbjDdbjGetFeatureInfo

DdbjDdbjGetFeatureInfo

 

description of DdbjDdbjGetFeatureInfo

 

DDBJ

 

string accession, string feature

 

string

 

accession="AB000050", feature="cds"

 

output sample

 

http://togows.dbcls.jp/soap/clients/ddbj/ruby/DdbjDdbjGetFeatureInfo.rb

 

http://togows.dbcls.jp/soap/clients/ddbj/perl/DdbjDdbjGetFeatureInfo.pl

 

http://togows.dbcls.jp/soap/clients/ddbj/python/DdbjDdbjGetFeatureInfo.py

 

http://togows.dbcls.jp/soap/clients/ddbj/java/DdbjDdbjGetFeatureInfo.java

 

30

 
368 Found
1 2 3 4 .. 25

Copyright (C) 2008 DBCLS