LSDB - アーカイブトップ - ヘルプ
データベースの説明  |   データ項目の説明  |   利用許諾  |   ヘルプ
＜表中の注釈について＞
(*) Ambiguity remains about the 5' border of the deleted region.
(**) "Unknown genes" stand for the DNA segments whose nucleotide sequences were either (1) found only in the genomic DNA contigs without any functional annotations or (2) not found anywhere in the current NCBI genome databases.
(***) The reverse (i.e., antisense) strand of a known gene was trapped.
(****) The trapped segment contained repetitive DNA sequences.
＜利用者の方へ＞
ダウンロードボタン([Download])を押す前に利用許諾を注意深くお読み下さい。 ダウンロードボタンを押すことによって、本利用許諾を承諾したものと見なします。
585 Found
1 2 3 .. 39

Clone number Trapped gene Expression in ES cells Identity CDS in mRNA Deleted region

02e-003

Unknown gene (**)

NT

-

-

-
Show
02e-003

02e-003

 

Unknown gene (**)

 

NT

 

-

 

-

 

-

 

TTTGANTGACTTGAGACAGCCACAGCACTTAGAAGACAACCAATATATCGTGCCGATGCATAG
AGGTCCACNTCCNTGTCTGTCCTGCCCTGATGCTAATGATAATTAAGAACTACTTTGTGCTTC
ACAGTACTTTCTCTCATCAATTGTAGCATTTAAGCCTCAGTCTCACAAAGAAAGTTGAGTGAT
AATTCTATGTATGATTGTGTTGTGTCCTACAGATATATCTTCAGCTCAATAAATTAGTCAACT
ACCAAAAAAAAAAAAAAAAAA

 

02e-008

Unknown gene (**)

NT

-

-

-
Show
02e-008

02e-008

 

Unknown gene (**)

 

NT

 

-

 

-

 

-

 

TTTGGACTACACTGAAGNACAGGGANCCNAGATGCTGTATCANANATGATGAGCCACTGACCT
CTGTAAGGCTGTCAGGACATACAACTCTCACTCTTCTTATTCTTCCTTGACTTACATAAACCT
CATGCAAGTGACCCCCAAAATAACCTTGAATAAACCTTCTTTGTCTAAAAAAAAAAAAAAAAA
AAATNCGGNTNNGGNTGTTTTNATTTCTGCCTTGNCTNACATAATCCTNATGCNTGTGACCGC
NAAAATAACACTTGAATGACACCTTNTTTGTCTAAGNTNTTNANATGNAAAGNGGATNAAATG
GNGCCTAATGNNNNNNATGANNGNGACAGNTNANTGATNAAGNGCCNNTNNAATGCTNANN

 

02e-014

Unknown gene (**)

NT

-

-

-
Show
02e-014

02e-014

 

Unknown gene (**)

 

NT

 

-

 

-

 

-

 

TTTGANTGCTCATCTAAGACAGCGAATNGNTTCAACTACCCTGAGGANANTCAACACANNTTG
GGAAAACATGATGCCATGCTACAAAATCTACATCCCCTCTTAGTAATACACTTACAGAAGNNG
TGGGAAGACCAAAAGCTACTATCTTCAGANGAGANGAGAATTTTCTACTTTAAATGTAGTAGC
TCTCCTCTTTAGCTAAATTGATGCATAACCAAAATCACTGTGAACATGAACAATTTGTGATGT
CTTTGAGAGATCACAATTAATGCAATAAATACAGTCTCTCTGGAAAAAAAAAAAAAAAAAAAN
AGATTTTCCCCCCNNCCTGTNNTTCNNNNTTTNNNNNCNTNNNNGACTNTGATGGGATAGGNG
TTATAATTACAGNNTNANGAACTGNTCTACACTTNCCATATTNTGNTTGNGACAAGAAGACCG
GGGGCATAAAGAGAACCATGGGGAAAGAAAACATANAAAATAAATTNAGNGNGGAAATGAAAN
AAAAAAA

 

02e-016

Mus musculus 45S ribosomal RNA precursor, gene, partial sequence; and ribosomal RNA intergenic spacer, complete sequence.

NT

292/292 (100%)

-

-
Show
02e-016

02e-016

 

Mus musculus 45S ribosomal RNA precursor, gene, partial sequence; and ribosomal RNA intergenic spacer, complete sequence.

 

NT

 

292/292 (100%)

 

-

 

-

 

TTTGAATGGTTCCAAGACTGCCCTTTGGGATTCAAACGGGAGCCAGNTTTGGACTGACTGGCT
GCCTTGCCTCCTCCTCCCCCTCCTCCCCCTTNTGCTTCAGATTTATTTATTATATGTAAGTAC
ACTGTAGCAGTTGTAGGACACACTAGACGAGGGCACCAGATCTCATTGTGGGTGGTTGTGAAC
CACCCACCATGTGGTTGCTGGGATTTGAACTCAGGATCTTCAGAAGAGCAGTCAGGGCTCTAA
ACCGCTGAGCCATCTCTCCAGCCTCCTGCATTCCTTCTTAAGGCATGAATGATCCCAGCATAG
GAAGACAGTCTGCCCTCCCTCCTTTTCGAGCCATTTTCCCTTTCACCATATACTCAATAAAAT
CAGTAAATGAAAAAAAAAAAAAAAAA

 

02e-018

Unknown gene (**)

NT

-

-

-
Show
02e-018

02e-018

 

Unknown gene (**)

 

NT

 

-

 

-

 

-

 

TTTAGAATCNGCCCGCGTNCATACTCTCTTAGGTTGCNGANCANGGTANTAGAGAGGCTGTNG
ATAAAGGGGCNANNGTANCTNAGGACAACTATCNCTGGTAGCCCACCTGNTNTGNAACTCNTC
TCTCTCCAAGCTNCAGNNCTTCTTGAAGGATCTGAATCTTGCTNANCNCAAANCNNTNNCNTT
CTGCATACTGCGCTTTGCATCACANTGCTACAGCACNTCTGANATCACACCATAATATCAGGG
TGGCTGTTCCATGCTGGGNTGATATANAGCTGATGGAAATATGTTCANNGCATAAAACTNACN
TTANANTGATACATGTGTNAGGNTNNNANTTCTNTANNATNNATGGAGGNGANTAACTGAATA
TNTTCAAGCCGCNGTGNTAAATGCTATGATTTACTTATTTCTTCCCTCCTACCCTCCCTNCTT
TNCTACTTNCCTCTNTACATCCCTACNTTCCTACTTGCCTATCCATTCATNCATTCCTNTTNT
TTNTTNCTTNCTTNNTCCTTNCTNCTNCNTTNCCTANNATATATNCCTNCNTNTNTNCTTNCT
TTNTTGNTTNTATNACTAAATAACNACTATCTTATNANNGAGATNNAACTTTNGATACTGATN
CAATAAACNNATATNGNNTGATAAAAAAAAANAAAAA

 

02e-020

wb31b09.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2307257 3', mRNA sequence.

NT

115/124 (93%)

-

-
Show
02e-020

02e-020

 

wb31b09.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2307257 3', mRNA sequence.

 

NT

 

115/124 (93%)

 

-

 

-

 

TTTGAATGAAGCCNNGAGGAANGCCAACTCGCACATCATATCCATCAGCTTGAGCCTTCAACT
TGAAACACCNNNGAAANAGTAAGGAGCCAGTGCNTAACTGTGCNNAGCTCACTTATTTGTGAT
NATCTGANNATAAACAACATGCTTGGGTAGAGAGAGAGAGGCCTGCTGAAAGCTTTGAGCAAG
ACATANACTCTACTAGAAATAAGCACTCCAGGACTGCTATATGGGTACACACGGGAAAGAGAT
CAAAGCCTGTACAGGCACCTGATGTCAGACTTGAAATGCCAAGTGGAAACACAACTAGTCANC
ATCTTCATTTATACACAATTTACAATATTTGATTCAAAATAAAAAAATCACAAGAAAAANAAA
AAAAAAAAA

 

02e-022

Rat mRNA for GABA receptor rho-3 subunit, complete cds.

NT

472/550 (86%)

196..1590

1315 (*) ..
Show
02e-022

02e-022

 

Rat mRNA for GABA receptor rho-3 subunit, complete cds.

 

NT

 

472/550 (86%)

 

196..1590

 

1315 (*) ..

 

TGTGAACNGTCNGGGTNNTTGANTNTNNNTNGANNGNTACCACNATNGNNGCNGTTCNAGNCA
TGGCCTTCGATGGTNGCTACCNTNACNGNAGNGANGGNTNTGGACCANGTCTTCCTTCTTTAC
TACACTCAGNAGAGNNCTCCATGAGTACAAAGTTCACAGGANNCCCCTGTGCAGATTCATCTC
AGATAAAAAGGAAATCCCTGGGAGGAAACGTTGGTAGAATCATCCTGGAAAACAACCACGTCA
TCGATACCTATTCTAGAATTGTATTCCCCACCGTTTATATAATATTTAATTTGTTTTACTGGG
GTATATATGTGTGAAGAGGACTTCTCTGCTTGTTGACTTTTTCCTTTCTTTGCAGTACTCAGG
GTGTTACACATGTTAAATAAGTATTTTACCAACCCCAGACTGAAGAGGAATGTTTTATGTAGA
CTTCCATTCGAGTCAGGTGGTATTTGTTTATTCCCTGGATATGAGTTGGACAGTTAAACTGGG
ATAGAGCCAGTCATGTCTCTTGGCCTCAGGAAGATGTAAACGATGACTGATTAACATTTAGTG
CAATGNTCANAGCCTTGGGGAAATTTGACTTTTNAGTAAGCATCATAAGCATGTGTNTATANG
GNAANTTTTCATCGGNATAAATATTTNNNACTTTTNATNTNAAAAAAAAAAAAA

 

02e-024

Unknown gene (**)

NT

-

-

-
Show
02e-024

02e-024

 

Unknown gene (**)

 

NT

 

-

 

-

 

-

 

TTTGAANGACCTTCTGATGCTGATATTATCTGAGTCTCNTGTGCTCTGGAGTACACAAGAAAT
GAAGAGTNGAAACCTCCACCACCAGCGGAGACAGAATATAAAGCTCGACTTGCTTATGCTTNT
CTCATGCAGTTTCATGCTGCTGCTTGAGACTTTGCAATATGTGTGCCCTAAAAGTAAGACATT
CTGATAGTAAATTATAGTTTTAATTCCTTTAAAAAAAAAAAAAAAAAAAAA

 

02e-025

Homo sapiens, clone IMAGE:5262739, mRNA.

NT

363/435 (83%)

-

-
Show
02e-025

02e-025

 

Homo sapiens, clone IMAGE:5262739, mRNA.

 

NT

 

363/435 (83%)

 

-

 

-

 

TTTGAATNTTTCAGGTNTTTACCTCCTGTCTTTCTTCACCATGCCTCGATCGGTGCTAGGTAG
CATGTGATTCCTNGCACCTNTACNTAGCACTAGTCCCAGAGATCCCCGAGTGTACAAGCAGTN
NCGCAGTCCTTCAGGACCTGTCAGTGGACTTACCCAGCACGGCTCAGGTNGAGCCTTCAGTCA
CCTACACCAGCCTGGGCCAGGAGACAGAAGAAGAGCCCCATGTACGTGTGGCCTAGGGGAAGA
CCTGCCCTGCCCACTGAGGACAACTCAGAGGCCATGTGTTTGCCCATCATCTGTATTGTACAT
AGAGAAAGGTATTTAGTAGGTGCAGTTTCACAGGTGGACTGCAAGGTAGCTAATCCTTTCATC
AAAGGAAGAAGCTGAAGACCACTGGAGACTCAGGCTTCAATCCACCTGACTCAGAGAGAGGTT
TTGATAGTGTGTATCCTGACCCAGTCCCCACCCCTCCATTGATTACTGTGAAAATTTTTGAAT
CAAAAACAAGTATCATTGTTACTATGANCNTTATTATNAATN

 

02e-029

Mus musculus RIKEN cDNA 4930583C14 gene (4930583C14Rik), mRNA.

NT

293/296 (99%)

105..827

633..
Show
02e-029

02e-029

 

Mus musculus RIKEN cDNA 4930583C14 gene (4930583C14Rik), mRNA.

 

NT

 

293/296 (99%)

 

105..827

 

633..

 

TTTGAATCCAATGGGGAGTAATCACAATGTCTTTGTCAGCTCTAAGCTTGCAGAATGGCGAAT
GCGGGTAGAGAGTTAGCCATCGGCTCTGGCCTCTTCTGGGAGGCTCATGAAAGACTGGTGAAG
TTACCAAACTGGGACTGTTCGACACTAGACCCTACGATCAAGATGAGGATTTGTGACTTTCTG
CAGAAGTTTAAGTGATCCAAGAGAGCATTCGTTCTACAGGGGCCAGCCGTCTTTGCCTTTTGA
GCCTCTTTCCCTAGGGAAGTCACCAAGAAACACACTGTTCCTTTACCTAATAAAAGAAAAAAA
AAACCTGAAAAAAAAAAAAAAAAAA

 

03e-021

Mus musculus 45S ribosomal RNA precursor, gene, partial sequence; and ribosomal RNA intergenic spacer, complete sequence.

NT

218/233 (94%)

-

-
Show
03e-021

03e-021

 

Mus musculus 45S ribosomal RNA precursor, gene, partial sequence; and ribosomal RNA intergenic spacer, complete sequence.

 

NT

 

218/233 (94%)

 

-

 

-

 

TTTGAATGCACAGATCTTTCCCATGCATGGCAAAAGCATGNAGACANTTGTAGGACACGACGT
AGGACGATGTAGCTACCANATCTCATTGTCGCGGTGGNTGTGAACCACCCACGCATGTGGTTG
CTGGGATTTGAACTCAGGATCTTCAGAAGAGCAGTCAGGGCTCTAAACCGATGAGCCATCTCT
CCAGCCTCCTACATTCCTTCTTAAGGCATGAATGATCCCAGCATGGGTAAGACAGTCTGCCCT
CCCTCCTTTTTGAGCCATTTTCCCTCTTTCACCATATACTCAATAAAATAAGTANATGAAAAA
AAAAAAAAAAAAGAAGGNGGGCTGCCCTCCCNTCCTTTTCGAGCCATTTTCCCTTTCACCATA
TACTCAATAAAATCAGTAAATGAAAAAAAAAAAAAAAAAA

 

03e-022

Mus musculus similar to Interferon-inducible protein (LOC234085), mRNA.

NT

523/523 (100%)

123..443

107..
Show
03e-022

03e-022

 

Mus musculus similar to Interferon-inducible protein (LOC234085), mRNA.

 

NT

 

523/523 (100%)

 

123..443

 

107..

 

TTTGAATCTTCAAAAGCCAAGAGATGCCTAAGGAGCAGCAAGAGGTGGTTTTACTGGGGTCAC
CCCACATCTCAACTTCTGCGACAGCCACCACAATCAACATGCCTGAGATCTCCACGCCTGACC
ATGTGATCTGGTCCCTGTTCAATACACTCTTCATGAACTTCTGCTGCCTGGGCTTCATAGCCT
ATGCCTACTCCGTGAAGTCTAAGGACAGGAAGATGGTGGGTGATACGACTGGGGCCCAGGCCT
TCGCCTCCACCGCCAGGTGCCTGAACATCAGCTCCCTGTTCTTCACCATCCTCATGGCCATCG
TCGTCATCGTTGTCTATGCCACTAGATGATGTGAGATGTCTTGCAACATCTCACAGTAGATAA
CAGATTCTGGGGCCTCCCGGGCTTGCTATGTGTTTCCTTGTCTATCACTGCCCCAAACCCTAG
ACTTAGTCCTGACCATTTGCCCCATACATATGCAAATGTGACACTCACAAATCTGTCCATGGT
GGACTCAATAAAGTGCACGTGCTGTGAAAAAAAAAAAAAAAAAA

 

03e-023

Mus musculus inner mitochondrial membrane peptidase 2-like (S. cerevisiae) (Immp2l-pending), mRNA.

NT

262/262 (100%)

64..591

472..
Show
03e-023

03e-023

 

Mus musculus inner mitochondrial membrane peptidase 2-like (S. cerevisiae) (Immp2l-pending), mRNA.

 

NT

 

262/262 (100%)

 

64..591

 

472..

 

TTTGAATGTTTCTCTGGGACTCCTGCATGCCCATGCCACACATATTTTGTGGCCTCCAGAGCG
CTGGCAGAGACTGGAATCTGTTCTTCCTCCAGAGCGCTGTCCACTCCAGACTGGTGAGAAATA
ACTGCACAAGAGCCCACCATAGGAGGAGCTGAACACACCAGATGCCTCCTTCTGGAGGGAGAT
GTTCCAGTGATGCTGAACACAAGACCTCTGTATATCTTTAAGGTTGTCTGGAATTTCCATATT
AAACAGTATTAAATGGCAAAAAAAAAAAAAAAAAAAA

 

03e-068

Unknown gene (**)

NT

-

-

-
Show
03e-068

03e-068

 

Unknown gene (**)

 

NT

 

-

 

-

 

-

 

TTTGAATATATTGTGTAACAGTTTCCCTGGAGATTGAAACATTCCATCCTACAAGAAGTTTCT
TGAGCCAGAAGGTAAAGAACTCAAAATATCTTCAGGAAGTCCCTGAAACTGACCAGATTCACT
AGGCTCCTCCCTCTCAAAAGCATACAATAAAGACTGGGAGAGTTAATATCAGACAAGCCAAGC
TTCAAGGAGGACTCCAAGATCAGATGAAGTGCCTGGAAGAAGCCACAACAACCTAGCTGCCTG
TTAGAGATTTAGACCAACTGATTTAGTTGGAAAAGACACTCTCCAACCTGTTGAGCTGCCTAC
AGTTTGTGCACTGTGCTCCAGGTTTTCAGCTCCGGTGAGCTGTCATCCATACTGGAATGGGCT
TTGATGATGTGGTTATCTTTGGGACACTTCCACTTCTGTAAGTAACTTGCTCACCTATATTGC
TATAAGCCCAATAAAACTCGTTAGTTTACCAAAAAAAAAAAAAAAA

 

03e-096

Unknown gene (**)

NT

-

-

-
Show
03e-096

03e-096

 

Unknown gene (**)

 

NT

 

-

 

-

 

-

 

CTTGAGCAAGAGGCTTGATGTTTCTTATTTCCGAAGATGAACAAGGGATGGGATGGTGGTTGA
GGCCTCTGTGGAATCTGAGGTTCTCTAATTCAAACTTGTGGACAGAATATGTGCAGATGGGCC
TGAAGACCCGTACATTTTTGCTTAGATAGGTTTCAGTTCCAGGCTGGTTTGGGTAATAAGGTA
GCATCGTATTACTTGATTGTACCAAAATAAACTTGGAGACCTTAGAGCCAGAAAAAAAAAAAA
AAAAAA

 
585 Found
1 2 3 .. 39