FC01AH04

FC01AH04

 

2

 

ORF1

 

38D38F344AED7866

 

138

 

IPR000558 | IPR007125 | IPR009072

 

SEQUENCE: FC01AH04_2_ORF1CRC64: 38D38F344AED7866LENGTH: 138 aa
InterPro
IPR000558
Family
Histone H2B
PRODOMPD000497Q9LZ45_ARATH_Q9LZ45;
 5e-30 [73-138]T    
PRINTSPR00621HISTONEH2B
 2.5e-50 [51-69]T  2.5e-50 [70-90]T  2.5e-50 [92-109]T  2.5e-50 [109-122]T 
 2.5e-50 [122-135]T    
SMARTSM00427no description
 1.4e-72 [41-137]T    
PROSITEPS00357HISTONE_H2B
 8e-5 [106-128]T    
Parentno parent
Childrenno children
Found inno entries
ContainsIPR007125
GO termsCellular Component: nucleosome (GO:0000786)
Molecular Function: DNA binding (GO:0003677)
Cellular Component: nucleus (GO:0005634)
Biological Process: nucleosome assembly (GO:0006334)
InterPro
IPR007125
Domain
Histone core
PFAMPF00125Histone
 7.4e-29 [45-115]T    
Parentno parent
Childrenno children
Found inIPR000164IPR000558IPR001951IPR002119
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
InterPro
IPR009072
Domain
Histone-fold
SUPERFAMILYSSF47113Histone-fold
 6.4e-38 [18-138]T    
Parentno parent
Childrenno children
Found inIPR000942IPR003195IPR003923IPR004990IPR006565
Containsno entries
GO termsnone
noIPR
unintegrated
unintegrated
GENE3DG3D.1.10.20.10no description
 8e-50 [9-138]T    
PANTHERPTHR23428HISTONE H2B
 3.1e-102 [10-138]T    
PROFILEPS50028HIST_TAF
 18.279 [52-115]T    
SEGsegseg
 NA [8-47]?    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone

 

chr02_finished_C02SLm0019I01.2.v1.seq_C02SLm0019I01.2

 

83.89

 

180

 

29

 

0

 

158

 

337

 

46648

 

46469

 

6E-29

 

127.0

 

AK246145

 

cccccaaattttcccttcaatggctccaaaggcagagaagaagccatcagctgagaaagctcctaaggccggcaagaagctgccgaaggacggcggagctgctgctgctggagacaagaagaagaagaaatcgaagaagtcgattgagacatacaagatctacatcttcaaggtgttgaagcaggttcatccagatataggtatttcaagtaaggctatgggaatcatgaacagcttcatcaatgatatcttcgagaagcttgctcaggaatcatccaggcttgctaggtacaacaaaaagcctaccatcacttctcgggagattcaaactgctgttcgattggtccttcccggtgaattggctaagcacgccgtctctgagggtactaaagctgttaccaaattcactagctcttagatttagatttgtttgttttctgtcgatttttctgttggatttatgattttcgattagatttggtgtgaagaacagaagaattgaatatagaatagatttgattgagttcagtaaatgaaattgttatatccaaaaaaaaaaaaaaaaaaaa

 

502