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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U03737-1
Contig ID Contig-U03737-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U03737-1 (Contig-U03737-1Q) /CSM_Contig/Contig-U03737-1Q.Seq.d
ATCAACTCCAAAAATCAACTCCAAAAATCAACTCCAAAAATCATCTAAAG
CATGTCAATTTCACAGATCAAGACGTCATAAGTGTCCGGAAGATTGTAAA
GATAGAATACCATTAGATAATAATAAAAATAAAAGTAATAGTAAAAATAT
TAATAATAAAAACAATGATAGTAGTATAAAAAATAACAATAATAATAATA
ATAATAATAATGAAGATGATGATAGTAATAATAATAATAATTATTTAGAT
GAAAATAATGAATATCCAGAAATTGAATTCTTAGGTACTAAATATAAAAA
TGATAAAAATGAAAATCTTATCAATAAATTTATTGAATCAAAAAAGAAAT
TTACAGAATCAAAAAATACAAACAATGATGGAGATGTTGTTAGTGGTGGT
GGTAGTGGTGATAATGATGATGAAGGTAATAATAAAATACCTTCAAGAAA
ATCAATAAATTCTATGACACCAAAGAGACCAGCAAGATCATCAAAAAAAG
TAGTAAATAAATTACCTATTGAAAGTTCTGATGACGATAGTTATCAGTCA
GCATCCAGTGGTGATTCAAGTGATGATTATCAAACAGCATCTGAACATGA
ATCAGAATCAGAATCAGAACCAGAAATATATAAATCAGATGATGGTGAAG
AAGAACAAATGAACAAGAATTTAAGATACCAAGTAAGAATAATAAAAGA
Gap no gap
Contig length 699
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 1
Number of EST 1
Link to clone list U03737
List of clone(s) 

est1=SFK783Z,1,700
Translated Amino Acid sequence 
STPKINSKNQLQKSSKACQFHRSRRHKCPEDCKDRIPLDNNKNKSNSKNINNKNNDSSIK
NNNNNNNNNNEDDDSNNNNNYLDENNEYPEIEFLGTKYKNDKNENLINKFIESKKKFTES
KNTNNDGDVVSGGGSGDNDDEGNNKIPSRKSINSMTPKRPARSSKKVVNKLPIESSDDDS
YQSASSGDSSDDYQTASEHESESESEPEIYKSDDGEEEQMNKNLRYQVRIIK
Translated Amino Acid sequence (All Frames) 
Frame A:
insknqlqkstpkii*smsisqikts*vsgrl*r*ntir***k*k***ky***kq***yk
k*q********r********lfr*k**isrn*ilry*i*k**k*ksyq*iy*ikkeiyri
kkykq*wrcc*www*w*****r***ntfkkinkfydtketskiikkssk*ity*kf**r*
lsvsiqw*fk**lsnsi*t*iririrtrni*ir*w*rrtneqefkipsknnkr


Frame B:
STPKINSKNQLQKSSKACQFHRSRRHKCPEDCKDRIPLDNNKNKSNSKNINNKNNDSSIK
NNNNNNNNNNEDDDSNNNNNYLDENNEYPEIEFLGTKYKNDKNENLINKFIESKKKFTES
KNTNNDGDVVSGGGSGDNDDEGNNKIPSRKSINSMTPKRPARSSKKVVNKLPIESSDDDS
YQSASSGDSSDDYQTASEHESESESEPEIYKSDDGEEEQMNKNLRYQVRIIK


Frame C:
qlqkstpkinsknhlkhvnftdqdvisvrkivkieyh*iiikikvivkiliiktmivv*k
itiiiiiiimkmmiviiiiii*mkimniqklns*vlnikmikmkilsinllnqkrnlqnq
kiqtmmemllvvvvvvimmmkviikylqenq*il*hqrdqqdhqkk**inyllkvlmtiv
isqhpvviqvmiikqhlnmnqnqnqnqkyinqmmvkknk*tri*dtk*e**k
own update 2004. 6. 9
Homology vs CSM-cDNA 
Query= Contig-U03737-1 (Contig-U03737-1Q)
/CSM_Contig/Contig-U03737-1Q.Seq.d
         (699 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U03737-1 (Contig-U03737-1Q) /CSM_Contig/Conti...   650  0.0
Contig-U09858-1 (Contig-U09858-1Q) /CSM_Contig/Conti...    46  5e-05
Contig-U12120-1 (Contig-U12120-1Q) /CSM_Contig/Conti...    42  8e-04
Contig-U11251-1 (Contig-U11251-1Q) /CSM_Contig/Conti...    42  8e-04
Contig-U09128-1 (Contig-U09128-1Q) /CSM_Contig/Conti...    42  8e-04
Contig-U13938-1 (Contig-U13938-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U13396-1 (Contig-U13396-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U13348-1 (Contig-U13348-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U11739-1 (Contig-U11739-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U11234-1 (Contig-U11234-1Q) /CSM_Contig/Conti...    40  0.003

>Contig-U03737-1 (Contig-U03737-1Q) /CSM_Contig/Contig-U03737-1Q.Seq.d
          Length = 699

 Score =  650 bits (328), Expect = 0.0
 Identities = 342/349 (97%)
 Strand = Plus / Plus

                                                                       
Query: 351 ttacagaatcaaaaaatacaaacaatgatggagatgttgttagtggtggtggtagtggtg 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttacagaatcaaaaaatacaaacaatgatggagatgttgttagtggtggtggtagtggtg 410

                                                                       
Query: 411 ataatgatgatgaaggtaataataaaataccttcaagaaaatcaataaattctatgacac 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ataatgatgatgaaggtaataataaaataccttcaagaaaatcaataaattctatgacac 470

                                                                       
Query: 471 caaagagaccagcaagatcatcnnnnnnngtagtaaataaattacctattgaaagttctg 530
           ||||||||||||||||||||||       |||||||||||||||||||||||||||||||
Sbjct: 471 caaagagaccagcaagatcatcaaaaaaagtagtaaataaattacctattgaaagttctg 530

                                                                       
Query: 531 atgacgatagttatcagtcagcatccagtggtgattcaagtgatgattatcaaacagcat 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 atgacgatagttatcagtcagcatccagtggtgattcaagtgatgattatcaaacagcat 590

                                                                       
Query: 591 ctgaacatgaatcagaatcagaatcagaaccagaaatatataaatcagatgatggtgaag 650
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ctgaacatgaatcagaatcagaatcagaaccagaaatatataaatcagatgatggtgaag 650

                                                            
Query: 651 aagaacaaatgaacaagaatttaagataccaagtaagaataataaaaga 699
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aagaacaaatgaacaagaatttaagataccaagtaagaataataaaaga 699


 Score =  230 bits (116), Expect = 2e-60
 Identities = 116/116 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atcaactccaaaaatcaactccaaaaatcaactccaaaaatcatctaaagcatgtcaatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atcaactccaaaaatcaactccaaaaatcaactccaaaaatcatctaaagcatgtcaatt 60

                                                                   
Query: 61  tcacagatcaagacgtcataagtgtccggaagattgtaaagatagaataccattag 116
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tcacagatcaagacgtcataagtgtccggaagattgtaaagatagaataccattag 116


 Score = 93.7 bits (47), Expect = 2e-19
 Identities = 47/47 (100%)
 Strand = Plus / Plus

                                                          
Query: 242 tatttagatgaaaataatgaatatccagaaattgaattcttaggtac 288
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tatttagatgaaaataatgaatatccagaaattgaattcttaggtac 288


>Contig-U09858-1 (Contig-U09858-1Q) /CSM_Contig/Contig-U09858-1Q.Seq.d
          Length = 1203

 Score = 46.1 bits (23), Expect = 5e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 393 gtggtggtggtagtggtgataat 415
           |||||||||||||||||||||||
Sbjct: 788 gtggtggtggtagtggtgataat 810


>Contig-U12120-1 (Contig-U12120-1Q) /CSM_Contig/Contig-U12120-1Q.Seq.d
          Length = 2703

 Score = 42.1 bits (21), Expect = 8e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 382 agatgttgttagtggtggtggtagtggtg 410
           ||||| || ||||||||||||||||||||
Sbjct: 37  agatgatggtagtggtggtggtagtggtg 65


 Score = 30.2 bits (15), Expect = 3.0
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 394  tggtggtggtagtgg 408
            |||||||||||||||
Sbjct: 1189 tggtggtggtagtgg 1203


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,017
Number of Sequences: 6905
Number of extensions: 11017
Number of successful extensions: 1732
Number of sequences better than 10.0: 314
length of query: 699
length of database: 5,674,871
effective HSP length: 16
effective length of query: 683
effective length of database: 5,564,391
effective search space: 3800479053
effective search space used: 3800479053
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 6. 7
Homology vs DNA 
Query= Contig-U03737-1 (Contig-U03737-1Q) /CSM_Contig/Contig-U03737-1Q.Seq.d
         (699 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ401302) Dictyostelium discoideum cDNA clone:dds22f21, 3' ...   396   0.0    3
(AC184562) Strongylocentrotus purpuratus clone R3-3013D1, WO...    62   3e-05  1
(AC175864) Strongylocentrotus purpuratus clone R3-15H14, WOR...    62   3e-05  1
(AC175861) Strongylocentrotus purpuratus clone R3-15H21, WOR...    62   3e-05  1
(AC175857) Strongylocentrotus purpuratus clone R3-15H22, WOR...    62   3e-05  1
(AC180133) Strongylocentrotus purpuratus clone R3-4007C4, WO...    54   5e-05  3
(AC153951) Mus musculus 10 BAC RP24-480P16 (Roswell Park Can...    48   1e-04  2
(AC128206) Rattus norvegicus clone CH230-482G22, WORKING DRA...    60   1e-04  1
(AC107440) Rattus norvegicus clone CH230-34E4, *** SEQUENCIN...    60   1e-04  1
(EJ471899) 1095403415081 Global-Ocean-Sampling_GS-28-01-01-1...    60   1e-04  1
(AC184807) Canis familiaris chromosome 1, clone XX-73E6, com...    58   5e-04  1
(AC145619) Homo sapiens BAC clone RP11-722J20 from chromosom...    58   5e-04  1
(AC142232) Homo sapiens fosmid clone XXFOS-83793A7 from 2, c...    58   5e-04  1
(AC111589) Rattus norvegicus clone CH230-102A11, *** SEQUENC...    54   0.002  2
(AC128103) Rattus norvegicus  NOVECTOR CH230-333G12 (Childre...    56   0.002  1
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098...    56   0.002  1
(AC117328) Rattus norvegicus clone CH230-376I5, WORKING DRAF...    56   0.002  1
(AL844509) Plasmodium falciparum chromosome 13.                    56   0.002  1
(AL049183) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    56   0.002  1
(DE277202) Oryzias latipes DNA, clone: ola1-229O17.F, genomi...    52   0.004  2
(DE054490) Oryzias latipes DNA, clone: ola1-024O14.F, genomi...    52   0.005  2
(AC135494) Rattus norvegicus clone CH230-5H12, WORKING DRAFT...    54   0.005  2
(BV067611) S212P6736FC10.T0 CZECHII/Ei Mus musculus STS geno...    54   0.007  1
(AL731783) Mouse DNA sequence from clone RP23-124E18 on chro...    54   0.007  1
(AC158527) Mus musculus BAC clone RP23-266E16 from chromosom...    54   0.007  1
(AC154585) Mus musculus BAC clone RP23-359K10 from 12, compl...    54   0.007  1
(AC138299) Mus musculus chromosome 18, clone RP23-296E4, com...    54   0.007  1
(AC121481) Rattus norvegicus  NOVECTOR CH230-218J9 (Children...    54   0.007  1
(FM992693) Candida dubliniensis CD36 chromosome 6, complete ...    54   0.007  1
(FM992692) Candida dubliniensis CD36 chromosome 5, complete ...    54   0.007  1
(CQ583482) Sequence 11240 from Patent WO0171042.                   54   0.007  1
(CQ583481) Sequence 11239 from Patent WO0171042.                   54   0.007  1
(AF231134) Drosophila melanogaster cyclin-dependent kinase 5...    54   0.007  1
(AF154416) Drosophila melanogaster Cdk5 activator-like prote...    54   0.007  1
(AE014134) Drosophila melanogaster chromosome 2L, complete s...    54   0.007  1
(AC171131) Helobdella robusta clone CH306-1A2, complete sequ...    54   0.007  1
(AC171127) Helobdella robusta clone CH306-1A1, complete sequ...    54   0.007  1
(AC092237) Drosophila melanogaster, chromosome 2L, region 31...    54   0.007  1
(AC009849) Drosophila melanogaster, chromosome 2L, region 31...    54   0.007  1
(AC005454) Drosophila melanogaster, chromosome 2R, region 31...    54   0.007  1
(AC139974) Rattus norvegicus clone CH230-380O10, WORKING DRA...    54   0.007  1
(AC134750) Rattus norvegicus clone CH230-337M7, *** SEQUENCI...    54   0.007  1
(AC130479) Mus musculus chromosome 18 clone RP23-356A2 map 1...    54   0.007  1
(AC130259) Rattus norvegicus clone CH230-186I23, WORKING DRA...    54   0.007  1
(AC130106) Rattus norvegicus clone CH230-17N23, WORKING DRAF...    54   0.007  1
(AC121648) Rattus norvegicus clone CH230-267C3, WORKING DRAF...    54   0.007  1
(AC121393) Rattus norvegicus clone CH230-410C15, *** SEQUENC...    54   0.007  1
(AC113732) Rattus norvegicus clone CH230-210M17, WORKING DRA...    54   0.007  1
(AC112623) Rattus norvegicus clone CH230-145O15, *** SEQUENC...    54   0.007  1
(AC112007) Rattus norvegicus clone CH230-235K10, *** SEQUENC...    54   0.007  1
(AC111749) Rattus norvegicus clone CH230-147B3, *** SEQUENCI...    54   0.007  1
(AC110388) Rattus norvegicus clone CH230-198D20, WORKING DRA...    54   0.007  1
(AC108569) Rattus norvegicus clone CH230-160L7, *** SEQUENCI...    54   0.007  1
(AC106376) Rattus norvegicus clone CH230-115H19, *** SEQUENC...    54   0.007  1
(AC106166) Rattus norvegicus clone CH230-103C12, *** SEQUENC...    54   0.007  1
(AC105481) Rattus norvegicus clone CH230-209I6, *** SEQUENCI...    54   0.007  1
(AC102504) Mus musculus clone RP24-553N1, WORKING DRAFT SEQU...    54   0.007  1
(AC097283) Rattus norvegicus clone CH230-167D17, WORKING DRA...    54   0.007  1
(AC095689) Rattus norvegicus clone CH230-9C22, *** SEQUENCIN...    54   0.007  1
(AC095683) Rattus norvegicus clone CH230-8O11, WORKING DRAFT...    54   0.007  1
(AC095320) Rattus norvegicus clone CH230-141D12, WORKING DRA...    54   0.007  1
(AC095101) Rattus norvegicus clone CH230-7I23, WORKING DRAFT...    54   0.007  1
(AC094747) Rattus norvegicus clone CH230-5H4, *** SEQUENCING...    54   0.007  1
(AC201634) Strongylocentrotus purpuratus clone R3-3107N13, W...    54   0.007  1
(AC184456) Strongylocentrotus purpuratus clone R3-3082I9, WO...    54   0.007  1
(AC180042) Strongylocentrotus purpuratus clone R3-24A7, WORK...    54   0.007  1
(AC178943) Strongylocentrotus purpuratus clone R3-3121D4, WO...    54   0.007  1
(AC176356) Strongylocentrotus purpuratus clone R3-3053H11, W...    54   0.007  1
(AC175946) Strongylocentrotus purpuratus clone R3-3038C21, W...    54   0.007  1
(AC012796) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    54   0.007  1
(AK169541) Mus musculus 3 days neonate thymus cDNA, RIKEN fu...    54   0.007  1
(AK042386) Mus musculus 3 days neonate thymus cDNA, RIKEN fu...    54   0.007  1
(AZ554557) RPCI-23-175D10.TJ RPCI-23 Mus musculus genomic cl...    54   0.007  1
(AZ331193) 1M0059I02F Mouse 10kb plasmid UUGC1M library Mus ...    54   0.007  1
(FI423484) CH322-154B09.x CHORI-322 Drosophila melanogaster ...    54   0.007  1
(FI272469) CccaBb036-D19JF CccABb Cajanus cajan genomic clon...    54   0.007  1
(DX781069) 2621250 VV07 Ustilago maydis genomic clone 116094...    54   0.007  1
(DX637617) 2062260 VV02 Ustilago maydis genomic clone 828726...    54   0.007  1
(DX628694) 2020527 VV02 Ustilago maydis genomic clone 822492...    54   0.007  1
(DE221360) Trifolium pratense DNA, clone:RCG12607.                 54   0.007  1
(AG629953) Macaca fuscata fuscata DNA, clone: MSB2-030F16_F,...    54   0.007  1
(BZ241111) CH230-324L22.TV CHORI-230 Segment 2 Rattus norveg...    54   0.007  1
(EC200233) 294356 CK01 Drosophila melanogaster cDNA clone 57...    54   0.007  1
(CO300669) EK178960.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr...    54   0.007  1
(FC847604) CBHN4838.rev CBHN Metridium senile tentacle Metri...    54   0.007  1
(DE278715) Oryzias latipes DNA, clone: ola1-232E13.F, genomi...    50   0.016  2
(DE093935) Oryzias latipes DNA, clone: ola1-213B15.R, genomi...    50   0.017  2
(AC096175) Rattus norvegicus clone CH230-11N23, WORKING DRAF...    50   0.019  2
(AC177421) Strongylocentrotus purpuratus clone R3-54J21, WOR...    38   0.019  2
(AC171134) Helobdella robusta clone CH306-1A5, complete sequ...    42   0.020  2
(BV594686) S215P6506RA6.T0 Clara Pan troglodytes troglodytes...    52   0.029  1
(BX469909) Mouse DNA sequence from clone RP23-111E6 on chrom...    52   0.029  1
(BX005292) Mouse DNA sequence from clone RP24-407G18 on chro...    52   0.029  1
(AL732391) Mouse DNA sequence from clone RP23-364H13 on chro...    52   0.029  1
(AL591905) Mouse DNA sequence from clone RP23-152H17 on chro...    52   0.029  1
(AC157667) Mus musculus 6 BAC RP24-86B22 (Roswell Park Cance...    52   0.029  1
(AC146896) Mus musculus chromosome X clone xcat-28-97f16, co...    52   0.029  1
(AC119181) Mus musculus chromosome 18, clone RP24-111I16, co...    52   0.029  1
(AC116857) Mus musculus chromosome 18, clone RP24-403E17, co...    52   0.029  1
(AC093447) Mus musculus strain 129/Sv clone ct7-25g12 map X,...    52   0.029  1
(AC192137) Pan troglodytes BAC clone CH251-591O10 from chrom...    52   0.029  1
(AC216543) Populus trichocarpa clone POP015-B14, complete se...    52   0.029  1
(AC182686) Populus trichocarpa clone Pop1-37M17, complete se...    52   0.029  1
(AE014298) Drosophila melanogaster chromosome X, complete se...    52   0.029  1
(AC010919) Drosophila melanogaster clone BACR32K23, complete...    52   0.029  1
(AC130643) Rattus norvegicus clone CH230-498D19, WORKING DRA...    52   0.029  1
(AC127602) Rattus norvegicus clone CH230-20M3, *** SEQUENCIN...    52   0.029  1
(AC125828) Rattus norvegicus clone CH230-74P20, *** SEQUENCI...    52   0.029  1
(AC123219) Rattus norvegicus clone CH230-175M19, *** SEQUENC...    52   0.029  1
(AC119787) Rattus norvegicus clone CH230-206E12, *** SEQUENC...    52   0.029  1
(AC119021) Rattus norvegicus clone CH230-244E11, WORKING DRA...    52   0.029  1
(AC113718) Rattus norvegicus clone CH230-113A12, *** SEQUENC...    52   0.029  1
(AC110364) Rattus norvegicus clone CH230-28L18, *** SEQUENCI...    52   0.029  1
(AC107417) Rattus norvegicus clone CH230-119A15, *** SEQUENC...    52   0.029  1
(AC106420) Rattus norvegicus clone CH230-129P15, *** SEQUENC...    52   0.029  1
(AC097678) Rattus norvegicus clone CH230-114J2, WORKING DRAF...    52   0.029  1
(AC096454) Rattus norvegicus clone CH230-44L3, WORKING DRAFT...    52   0.029  1
(AC096181) Rattus norvegicus clone CH230-31L7, *** SEQUENCIN...    52   0.029  1
(AC094771) Rattus norvegicus clone CH230-5P4, *** SEQUENCING...    52   0.029  1
(CT868705) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***...    52   0.029  1
(CT573037) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***...    52   0.029  1
(CR940348) Theileria annulata genomic DNA chromosome 2.            52   0.029  1
(AC220880) Bos taurus clone CH240-342J6, WORKING DRAFT SEQUE...    52   0.029  1
(AC201485) Strongylocentrotus purpuratus clone R3-3060E20, W...    52   0.029  1
(AC201316) Strongylocentrotus purpuratus clone R3-16K24, WOR...    52   0.029  1
(AC184280) Strongylocentrotus purpuratus clone R3-32K14, WOR...    52   0.029  1
(AC180847) Strongylocentrotus purpuratus clone R3-3025N11, W...    52   0.029  1
(AC179819) Strongylocentrotus purpuratus clone R3-1012O4, WO...    52   0.029  1
(AC179084) Strongylocentrotus purpuratus clone R3-4009J08, W...    52   0.029  1
(AC178819) Strongylocentrotus purpuratus clone R3-22O15, WOR...    52   0.029  1
(AC174880) Strongylocentrotus purpuratus clone R3-1030O9, WO...    52   0.029  1
(AC173049) Bos taurus clone CH240-126N21, WORKING DRAFT SEQU...    52   0.029  1
(AC163336) Mus musculus chromosome 18 clone RP23-69J24 map 1...    52   0.029  1
(AC012895) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    52   0.029  1
(AZ350936) 1M0088O09R Mouse 10kb plasmid UUGC1M library Mus ...    52   0.029  1
(AZ077711) RPCI-23-410C10.TJB RPCI-23 Mus musculus genomic c...    52   0.029  1
(DU699801) Bst032328 lambda03 Boechera stricta genomic clone...    52   0.029  1
(AG970802) Drosophila simulans DNA, clone: DSM1-009I16.R.fa,...    52   0.029  1
(DH478081) Monosiga ovata DNA, fosmid clone: MOF-029C04, gen...    52   0.029  1
(DH310651) Oryzias latipes Fosmid clone:GOLWFno664_h12, forw...    52   0.029  1
(CE784081) tigr-gss-dog-17000317744746 Dog Library Canis lup...    52   0.029  1
(FG513201) 031002KAYB003874HT (KAYB) Actinidia chinensis you...    52   0.029  1
(FG428443) 010423KABA018761HT (KABA) A. deliciosa petal Acti...    52   0.029  1
(FF407842) gmapht_0042j06.pDNR.f2 Gadus morhua heart library...    52   0.029  1
(EY295753) CAWX12425.rev CAWX Helobdella robusta Primary Ear...    52   0.029  1
(DH132105) Oryzias latipes Fosmid clone:GOLWFno339_p13, forw...    48   0.044  2
(DE269746) Oryzias latipes DNA, clone: ola1-191O10.R, genomi...    48   0.059  2
(AC201538) Strongylocentrotus purpuratus clone R3-3096O24, W...    46   0.062  4
(DH000451) Oryzias latipes Fosmid clone:GOLWFno0_k21, forwar...    48   0.062  2
(AC133091) Mus musculus BAC clone RP23-394D15 from chromosom...    48   0.069  2
(AC128345) Rattus norvegicus clone CH230-103N20, *** SEQUENC...    34   0.069  2
(AC098002) Rattus norvegicus clone CH230-103D1, *** SEQUENCI...    36   0.069  2
(AC095273) Rattus norvegicus clone CH230-11J14, WORKING DRAF...    34   0.070  2
(AC105721) Rattus norvegicus clone CH230-269J22, *** SEQUENC...    36   0.070  2
(AC122127) Mus musculus chromosome 1, clone RP24-401K1, comp...    36   0.070  2
(AC142132) Rattus norvegicus clone CH230-303E9, *** SEQUENCI...    34   0.071  2
(AC177726) Strongylocentrotus purpuratus clone R3-1008P4, WO...    46   0.071  2
(AC177271) Strongylocentrotus purpuratus clone R3-43O10, WOR...    46   0.072  2
(DH658360) Rattus norvegicus DNA, BAC clone: RNB1-203O22, 5'...    34   0.090  2
(AL845290) Mouse DNA sequence from clone RP23-201A19 on chro...    50   0.11   1
(AL663106) Mouse DNA sequence from clone CT7-314H19 on chrom...    50   0.11   1
(AL512597) Mouse DNA sequence from clone RP23-132G2 on chrom...    50   0.11   1
(AL450395) Mouse DNA sequence from clone RP23-145O4 on chrom...    50   0.11   1
(AC161433) Mus musculus chromosome 8, clone RP23-50F12, comp...    50   0.11   1
(AC158219) Mus musculus chromosome 8, clone RP23-189N10, com...    50   0.11   1
(AC134893) Mus musculus BAC clone RP24-251N8 from 9, complet...    50   0.11   1
(AC134331) Mus musculus BAC clone RP24-344O12 from chromosom...    50   0.11   1
(AC133495) Mus musculus BAC clone RP24-331G15 from chromosom...    50   0.11   1
(AC116472) Mus musculus chromosome 7, clone RP23-384B23, com...    50   0.11   1
(AC098731) Mus musculus BAC clone RP23-3L10 from 9, complete...    50   0.11   1
(AC187992) Pan troglodytes chromosome 7 clone CH251-392K12, ...    50   0.11   1
(CT573078) Medicago truncatula chromosome 5 clone mte1-4f8, ...    50   0.11   1
(AC210653) Populus trichocarpa clone POP054-B08, complete se...    50   0.11   1
(AC189379) Brassica rapa subsp. pekinensis clone KBrB049N17,...    50   0.11   1
(CQ869866) Sequence 287 from Patent WO2004074320.                  50   0.11   1
(AR553270) Sequence 8401 from patent US 6747137.                   50   0.11   1
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    50   0.11   1
(AC106040) Homo sapiens BAC clone RP13-546K1 from 7, complet...    50   0.11   1
(AC091906) Homo sapiens chromosome 5 clone RP11-193P20, comp...    50   0.11   1
(AC015722) Homo sapiens chromosome 15, clone RP11-167B3, com...    50   0.11   1
(AC158178) Rattus norvegicus clone CH230-37N9, WORKING DRAFT...    50   0.11   1
(AC137199) Rattus norvegicus clone CH230-unknown, *** SEQUEN...    50   0.11   1
(AC134286) Rattus norvegicus clone CH230-32D4, *** SEQUENCIN...    50   0.11   1
(AC132523) Rattus norvegicus clone CH230-440A17, WORKING DRA...    50   0.11   1
(AC131830) Rattus norvegicus clone CH230-292H17, WORKING DRA...    50   0.11   1
(AC130030) Rattus norvegicus clone CH230-59C8, WORKING DRAFT...    50   0.11   1
(AC129853) Rattus norvegicus clone CH230-229L15, *** SEQUENC...    50   0.11   1
(AC129356) Rattus norvegicus clone CH230-286G14, WORKING DRA...    50   0.11   1
(AC128860) Rattus norvegicus clone CH230-437O7, WORKING DRAF...    50   0.11   1
(AC128792) Rattus norvegicus clone CH230-262A9, WORKING DRAF...    50   0.11   1
(AC128133) Rattus norvegicus clone CH230-396J24, WORKING DRA...    50   0.11   1
(AC123364) Rattus norvegicus clone CH230-440O9, *** SEQUENCI...    50   0.11   1
(AC121728) Rattus norvegicus clone CH230-325C17, *** SEQUENC...    50   0.11   1
(AC121713) Rattus norvegicus clone CH230-117M6, *** SEQUENCI...    50   0.11   1
(AC121201) Rattus norvegicus clone CH230-111K20, *** SEQUENC...    50   0.11   1
(AC118297) Rattus norvegicus clone CH230-24E4, WORKING DRAFT...    50   0.11   1
(AC115774) Mus musculus clone RP23-122D18, LOW-PASS SEQUENCE...    50   0.11   1
(AC112985) Mus musculus clone RP24-191L18, WORKING DRAFT SEQ...    50   0.11   1
(AC111641) Rattus norvegicus clone CH230-100N18, WORKING DRA...    50   0.11   1
(AC110934) Rattus norvegicus clone CH230-243M12, *** SEQUENC...    50   0.11   1
(AC110628) Rattus norvegicus clone CH230-139L15, WORKING DRA...    50   0.11   1
(AC110345) Rattus norvegicus clone CH230-53C9, WORKING DRAFT...    50   0.11   1
(AC109679) Rattus norvegicus clone CH230-91E15, *** SEQUENCI...    50   0.11   1
(AC108627) Rattus norvegicus clone CH230-65F4, *** SEQUENCIN...    50   0.11   1
(AC105623) Rattus norvegicus clone CH230-115G22, WORKING DRA...    50   0.11   1
(AC105479) Rattus norvegicus clone CH230-210P19, WORKING DRA...    50   0.11   1
(AC103343) Rattus norvegicus clone CH230-1P3, WORKING DRAFT ...    50   0.11   1
(AC102598) Mus musculus chromosome 8 clone RP23-364L14 map 8...    50   0.11   1
(AC102252) Mus musculus clone RP24-171K5, WORKING DRAFT SEQU...    50   0.11   1
(AC099688) Homo sapiens chromosome 8 clone RP11-262G18 map 8...    50   0.11   1
(AC099076) Rattus norvegicus clone CH230-96P17, WORKING DRAF...    50   0.11   1
(AC098577) Rattus norvegicus clone CH230-87C18, WORKING DRAF...    50   0.11   1
(AC097902) Rattus norvegicus clone CH230-153J10, *** SEQUENC...    50   0.11   1
(AC096817) Rattus norvegicus clone CH230-21P20, WORKING DRAF...    50   0.11   1
(AC096315) Rattus norvegicus clone CH230-134D14, WORKING DRA...    50   0.11   1
(AC095990) Rattus norvegicus clone CH230-31G13, WORKING DRAF...    50   0.11   1
(AC095540) Rattus norvegicus clone CH230-8F24, *** SEQUENCIN...    50   0.11   1
(FP017269) Brassica rapa subsp. pekinensis clone KBrH113C04,...    50   0.11   1
(AC094313) Rattus norvegicus clone CH230-3G9, *** SEQUENCING...    50   0.11   1
(AC094174) Rattus norvegicus clone CH230-2M9, *** SEQUENCING...    50   0.11   1
(CU466533) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    50   0.11   1
(AC232667) Lama pacos clone CH246-249C19, WORKING DRAFT SEQU...    50   0.11   1
(AC232536) Brassica rapa subsp. pekinensis clone KBrH001F03,...    50   0.11   1
(AC186447) Microcebus murinus clone CH257-305B17, WORKING DR...    50   0.11   1
(AC186097) Microcebus murinus clone CH257-255I4, WORKING DRA...    50   0.11   1
(AC181343) Strongylocentrotus purpuratus clone R3-115B12, WO...    50   0.11   1
(AC180856) Strongylocentrotus purpuratus clone R3-3069D4, WO...    50   0.11   1
(AC180837) Strongylocentrotus purpuratus clone R3-3069N16, W...    50   0.11   1
(AC180273) Strongylocentrotus purpuratus clone R3-3123N06, W...    50   0.11   1
(AC180271) Strongylocentrotus purpuratus clone R3-3123M09, W...    50   0.11   1
(AC178477) Strongylocentrotus purpuratus clone R3-3039C22, W...    50   0.11   1
(AC176785) Strongylocentrotus purpuratus clone R3-1110L8, WO...    50   0.11   1
(AC176773) Strongylocentrotus purpuratus clone R3-3104I11, W...    50   0.11   1
(AC173361) Strongylocentrotus purpuratus clone R3-1113J20, W...    50   0.11   1
(AC024271) Homo sapiens chromosome 15 clone RP11-402I2 map 1...    50   0.11   1
(AK037788) Mus musculus 16 days neonate thymus cDNA, RIKEN f...    50   0.11   1
(AZ965898) 2M0236K10F Mouse 10kb plasmid UUGC2M library Mus ...    50   0.11   1
(AZ708493) RPCI-23-221O18.TJ RPCI-23 Mus musculus genomic cl...    50   0.11   1
(AQ975876) RPCI-23-337P3.TJ RPCI-23 Mus musculus genomic clo...    50   0.11   1
(ER936957) AF__Bb0006E14r AF__Bb Aquilegia formosa genomic, ...    50   0.11   1
(DX901671) KBrH034I08F KBrH, Brassica rapa HindIII BAC libra...    50   0.11   1
(DH267642) Oryzias latipes Fosmid clone:GOLWFno596_b20, reve...    50   0.11   1
(DH215222) Oryzias latipes Fosmid clone:GOLWFno540_o22, reve...    50   0.11   1
(DE222970) Trifolium pratense DNA, clone:RCG14542.                 50   0.11   1
(DE097620) Oryzias latipes DNA, clone: ola1-127M19.F, genomi...    50   0.11   1
(CU021779) Equus caballus GSS, BAC clone CH241-99C12, SP6 en...    50   0.11   1
(CT956138) Equus caballus GSS, BAC clone CH241-30A20, SP6 en...    50   0.11   1
(CR264852) Reverse strand read from insert in 5'HPRT inserti...    50   0.11   1
(CR259716) Forward strand read from insert in 5'HPRT inserti...    50   0.11   1
(CR137252) Forward strand read from insert in 5'HPRT inserti...    50   0.11   1
(AG603986) Mus musculus molossinus DNA, clone:MSMg01-536O02....    50   0.11   1
(EL528312) EST_omor_eva_7465 omoreva mixed_tissue Osmerus mo...    50   0.11   1
(EL528311) EST_omor_eva_7464 omoreva mixed_tissue Osmerus mo...    50   0.11   1
(EL524681) EST_omor_eva_3834 omoreva mixed_tissue Osmerus mo...    50   0.11   1
(EL423108) CHCM2686.b1_L24.ab1 CHC(LMS) Texas blueweed Helia...    50   0.11   1
(EC688261) JLE00002065 Jakoba libera Company (STANDARD) Jako...    50   0.11   1
(EB323221) CNSN01-F-100708-501 Normalized CNS library (juven...    50   0.11   1
(EB302898) CNSN01-F-061699-501 Normalized CNS library (juven...    50   0.11   1
(EB295110) CNSN01-F-045935-501 Normalized CNS library (juven...    50   0.11   1
(DY944796) CHPY13106.b1_C13.ab1 CHP(XYZ) plains sunflower He...    50   0.11   1
(BB631048) Mus musculus 16 days neonate thymus cDNA, RIKEN f...    50   0.11   1
(FG599224) PFR_T3_83R_C07_11SEP2003_059 Opium poppy root cDN...    50   0.11   1
(EY823407) PT11-C1-901-050-E05-CT.F Poncirus trifoliata leaf...    50   0.11   1
(EY819019) PT11-C1-901-004-E12-CT.F Poncirus trifoliata leaf...    50   0.11   1
(EX194916) gmapht_0042j06.pDNRm13r Gadus morhua heart librar...    50   0.11   1
(EV069620) BNSCS4CT_UP_146_A02_20MAY2007_016 Brassica napus ...    50   0.11   1
(AP007375) Lotus japonicus genomic DNA, chromosome 3, clone:...    44   0.13   2
(DH159948) Oryzias latipes Fosmid clone:GOLWFno433_g04, reve...    46   0.16   2
(AC177311) Strongylocentrotus purpuratus clone R3-46D5, WORK...    44   0.17   2
(DE085076) Oryzias latipes DNA, clone: ola1-187C01.F, genomi...    46   0.19   2
(DH380144) Oryzias latipes Fosmid clone:GOLWFno780_f04, forw...    46   0.20   2
(DE082666) Oryzias latipes DNA, clone: ola1-235J02.F, genomi...    46   0.22   2
(GE523711) CCHS10872.b1_P05.ab1 CCHS Espina Barnadesia spino...    46   0.24   2
(AC116060) Rattus norvegicus clone CH230-223K14, *** SEQUENC...    46   0.26   2
(AC136419) Rattus norvegicus clone CH230-7O3, *** SEQUENCING...    38   0.26   2
(AC177192) Strongylocentrotus purpuratus clone R3-4018K1, WO...    36   0.26   2
(AC177190) Strongylocentrotus purpuratus clone R3-4018H3, WO...    36   0.26   2
(AC134285) Rattus norvegicus clone CH230-66E12, *** SEQUENCI...    46   0.26   2
(CT030189) Mouse DNA sequence from clone RP24-402B23 on chro...    36   0.26   2
(AC104302) Homo sapiens chromosome 3 clone RP11-379L20, comp...    36   0.26   2
(AC137679) Mus musculus chromosome 12, clone RP23-302N13, co...    36   0.26   2
(CU856596) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   0.26   2
(GE544721) CCHS3707.b1_E16.ab1 CCHS Espina Barnadesia spinos...    46   0.26   2
(AC180833) Strongylocentrotus purpuratus clone R3-3069H16, W...    36   0.26   2
(AC105477) Rattus norvegicus clone CH230-203K10, *** SEQUENC...    48   0.26   2
(AC116991) Homo sapiens chromosome 3 clone RP11-264M9, compl...    36   0.26   2
(AL833785) Mouse DNA sequence from clone RP23-191H7 on chrom...    44   0.26   2
(AC181100) Strongylocentrotus purpuratus clone R3-3047F01, W...    40   0.26   2
(AC181613) Strongylocentrotus purpuratus clone R3-1106I24, W...    36   0.27   2
(AC106337) Rattus norvegicus clone CH230-55N24, *** SEQUENCI...    40   0.27   2
(DE256601) Oryzias latipes DNA, clone: ola1-140O08.F, genomi...    46   0.29   2
(AC168466) Strongylocentrotus purpuratus clone R3-35D20, WOR...    46   0.30   2
(EL451694) CHTM4561.b1_B14.ab1 CHT(LMS) Jerusalem artichoke ...    40   0.30   2
(AC115399) Rattus norvegicus chromosome 18 clone CH230-215B1...    42   0.33   3
(EI307037) GM_WBc0035P19.r GM_WBc Glycine max genomic clone ...    36   0.34   2
(AC176491) Strongylocentrotus purpuratus clone R3-3072D1, WO...    46   0.40   4
(AC178406) Strongylocentrotus purpuratus clone R3-3112D20, W...    44   0.42   3
(U18939) Battrachocottus baikalensis orf1 and orf2 genes, co...    48   0.45   1
(AB232920) Oryzias latipes hox gene cluster, complete cds, c...    48   0.45   1
(AL662920) Mouse DNA sequence from clone RP23-98M4 on chromo...    48   0.45   1
(AL603702) Mouse DNA sequence from clone RP23-406A14 on chro...    48   0.45   1
(AL596183) Mouse DNA sequence from clone RP23-286B12 on chro...    48   0.45   1
(AC171111) Mus musculus BAC clone RP24-131J20 from chromosom...    48   0.45   1
(AC169675) Mus musculus BAC clone RP24-200J3 from chromosome...    48   0.45   1
(AC159129) Mus musculus BAC clone RP23-472N21 from chromosom...    48   0.45   1
(AC152415) Mus musculus BAC clone RP23-359F16 from 10, compl...    48   0.45   1
(AC147224) Mus musculus BAC clone RP23-101E7 from 15, comple...    48   0.45   1
(AC137107) Mus musculus chromosome 5, clone RP23-274I21, com...    48   0.45   1
(AC134895) Mus musculus BAC clone RP24-288D5 from 8, complet...    48   0.45   1
(AC131771) Mus musculus BAC clone RP24-297P10 from chromosom...    48   0.45   1
(AC130822) Mus musculus BAC clone RP23-249G11 from chromosom...    48   0.45   1
(AC121898) Mus musculus BAC clone RP24-161A24 from chromosom...    48   0.45   1
(AC121722) Rattus norvegicus X BAC CH230-342C11 (Children's ...    48   0.45   1
(AC118700) Mus musculus chromosome 3, clone RP23-24O21, comp...    48   0.45   1
(AC116593) Mus musculus BAC clone RP24-91C7 from chromosome ...    48   0.45   1
(AC115029) Mus musculus chromosome 3, clone RP24-248I17, com...    48   0.45   1
(AC102751) Mus musculus chromosome 19, clone RP24-531N3, com...    48   0.45   1
(AC101797) Mus musculus chromosome 1, clone RP24-211O21, com...    48   0.45   1
(AC098157) Rattus norvegicus X BAC CH230-75N19 (Children's H...    48   0.45   1
(CU640366) Podospora anserina genomic DNA chromosome 2, supe...    48   0.45   1
(CR380952) Candida glabrata strain CBS138 chromosome F compl...    48   0.45   1
(AP008208) Oryza sativa (japonica cultivar-group) genomic DN...    48   0.45   1
(AP005011) Oryza sativa Japonica Group genomic DNA, chromoso...    48   0.45   1
(AP004854) Oryza sativa Japonica Group genomic DNA, chromoso...    48   0.45   1
(EA694999) Sequence 73878 from patent US 7365185.                  48   0.45   1
(EA623988) Sequence 2867 from patent US 7365185.                   48   0.45   1
(E37702) Barnacles cypris larva-specific attachment metamorp...    48   0.45   1
(AR550056) Sequence 5187 from patent US 6747137.                   48   0.45   1
(AB024941) Balanus amphitrite bcs-6c mRNA, complete cds.           48   0.45   1
(AL158800) Human chromosome 14 DNA sequence BAC R-359N5 of l...    48   0.45   1
(AC117489) Homo sapiens 3 BAC CTD-2006M22 (CalTech BAC Libra...    48   0.45   1
(AC091827) Homo sapiens chromosome 5 clone CTD-2006A19, comp...    48   0.45   1
(AC156539) Bos taurus clone CH240-54E17, WORKING DRAFT SEQUE...    48   0.45   1
(AC135816) Rattus norvegicus clone CH230-314A24, *** SEQUENC...    48   0.45   1
(AC135744) Rattus norvegicus clone CH230-179D23, *** SEQUENC...    48   0.45   1
(AC135537) Rattus norvegicus clone CH230-8L3, WORKING DRAFT ...    48   0.45   1
(AC134141) Rattus norvegicus clone CH230-374G4, WORKING DRAF...    48   0.45   1
(AC133735) Rattus norvegicus clone CH230-162F24, *** SEQUENC...    48   0.45   1
(AC133047) Rattus norvegicus clone CH230-30L17, *** SEQUENCI...    48   0.45   1
(AC132628) Rattus norvegicus clone CH230-237A18, *** SEQUENC...    48   0.45   1
(AC131485) Lytechinus variegatus clone Lv183H12, *** SEQUENC...    48   0.45   1
(AC114711) Rattus norvegicus clone CH230-177M19, *** SEQUENC...    48   0.45   1
(AC113662) Rattus norvegicus clone CH230-154O1, WORKING DRAF...    48   0.45   1
(AC107133) Rattus norvegicus clone CH230-41D1, *** SEQUENCIN...    48   0.45   1
(AC106273) Rattus norvegicus clone CH230-235C9, WORKING DRAF...    48   0.45   1
(AC099185) Rattus norvegicus clone CH230-117D9, *** SEQUENCI...    48   0.45   1
(AC097543) Rattus norvegicus clone CH230-126I1, WORKING DRAF...    48   0.45   1
(AC096927) Rattus norvegicus clone CH230-4J23, WORKING DRAFT...    48   0.45   1
(AC095906) Rattus norvegicus clone CH230-10L23, *** SEQUENCI...    48   0.45   1
(AC095640) Rattus norvegicus clone CH230-8K10, WORKING DRAFT...    48   0.45   1
(AC095420) Rattus norvegicus clone CH230-7C15, *** SEQUENCIN...    48   0.45   1
(AC094728) Rattus norvegicus clone CH230-5H22, WORKING DRAFT...    48   0.45   1
(FP236478) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.45   1
(FP089470) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.45   1
(CU915407) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.45   1
(AC094475) Rattus norvegicus clone CH230-4J5, *** SEQUENCING...    48   0.45   1
(CU076088) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.45   1
(AY657029) Mus musculus chromosome 6 clone GA_x54KRFPKN04:90...    48   0.45   1
(AP009902) Lotus japonicus genomic DNA, clone: LjT10C06, TM2...    48   0.45   1
(AP004238) Oryza sativa Japonica Group genomic DNA, chromoso...    48   0.45   1
(AC201533) Strongylocentrotus purpuratus clone R3-3090N2, WO...    48   0.45   1
(AC201525) Strongylocentrotus purpuratus clone R3-3090B10, W...    48   0.45   1
(AC201047) Strongylocentrotus purpuratus clone R3-12M23, WOR...    48   0.45   1
(AC199688) Spermophilus tridecemlineatus clone VMRC20-171D23...    48   0.45   1
(AC181184) Strongylocentrotus purpuratus clone R3-3040F23, W...    48   0.45   1
(AC180501) Strongylocentrotus purpuratus clone R3-3099I20, W...    48   0.45   1
(AC180492) Strongylocentrotus purpuratus clone R3-30B21, WOR...    48   0.45   1
(AC179575) Strongylocentrotus purpuratus clone R3-8O3, WORKI...    48   0.45   1
(AC179438) Strongylocentrotus purpuratus clone R3-1040H9, WO...    48   0.45   1
(AC179255) Strongylocentrotus purpuratus clone R3-42M23, WOR...    48   0.45   1
(AC178512) Strongylocentrotus purpuratus clone R3-113H14, WO...    48   0.45   1
(AC177001) Strongylocentrotus purpuratus clone R3-37B18, WOR...    48   0.45   1
(AC176173) Strongylocentrotus purpuratus clone R3-3066I21, W...    48   0.45   1
(AC168701) Strongylocentrotus purpuratus clone R3-3014A4, WO...    48   0.45   1
(AC009798) Homo sapiens chromosome 11 clone 404_L_21 map 11,...    48   0.45   1
(AC009448) Homo sapiens clone RP11-2E15, WORKING DRAFT SEQUE...    48   0.45   1
(BH514878) BOGNS79TR BOGN Brassica oleracea genomic clone BO...    48   0.45   1
(ER799079) POTJC06TF Solanum tuberosum RHPOTKEY BAC ends Sol...    48   0.45   1
(ER531474) 1093015759498 Global-Ocean-Sampling_GS-35-01-01-1...    48   0.45   1
(EI256795) OR__Ba0061E20.f OR__Ba Oryza rufipogon genomic cl...    48   0.45   1
(DX794446) 2625136 VV07 Ustilago maydis genomic clone 116796...    48   0.45   1
(DX790598) 2640978 VV07 Ustilago maydis genomic clone 116929...    48   0.45   1
(DX756353) 2351693 VV03 Ustilago maydis genomic clone 102215...    48   0.45   1
(DX750856) 2529765 VV03 Ustilago maydis genomic clone 108414...    48   0.45   1
(DX725701) 2469438 VV03 Ustilago maydis genomic clone 106689...    48   0.45   1
(DX703276) 2466468 VV03 Ustilago maydis genomic clone 104957...    48   0.45   1
(DX697053) 2348493 VV03 Ustilago maydis genomic clone 861151...    48   0.45   1
(DX696978) 2310300 VV03 Ustilago maydis genomic clone 861135...    48   0.45   1
(DX637774) 2075123 VV02 Ustilago maydis genomic clone 829884...    48   0.45   1
(DX637456) 2066252 VV02 Ustilago maydis genomic clone 827650...    48   0.45   1
(DX626404) 1984547 VV02 Ustilago maydis genomic clone 804235...    48   0.45   1
(AL408209) T7 end of clone AV0AA007B10 of library AV0AA from...    48   0.45   1
(DH815361) Rattus norvegicus DNA, BAC clone: RNB1-417C20, 5'...    48   0.45   1
(DH545834) Rattus norvegicus DNA, BAC clone: RNB1-052F10, 5'...    48   0.45   1
(DH365983) Oryzias latipes Fosmid clone:GOLWFno748_p24, forw...    48   0.45   1
(DE971839) Macropus eugenii DNA, BAC clone: MEB1-177D10_R, 3...    48   0.45   1
(DE223302) Trifolium pratense DNA, clone:RCG14938.                 48   0.45   1
(DE223276) Trifolium pratense DNA, clone:RCG14912.                 48   0.45   1
(DE220084) Trifolium pratense DNA, clone:RCG11095.                 48   0.45   1
(DE218597) Trifolium pratense DNA, clone:RCG09363.                 48   0.45   1
(DE117539) Oryzias latipes DNA, forward end of BAC clone: Md...    48   0.45   1
(DE100054) Oryzias latipes DNA, clone: ola1-131K24.F, genomi...    48   0.45   1
(DE058002) Oryzias latipes DNA, clone: ola1-100F24.R, genomi...    48   0.45   1
(CT071721) Sus scrofa genomic clone PigE-248L13, genomic sur...    48   0.45   1
(CL685523) PRI0141b_H12_2 - PRI0141b.BR (306) Mixed stage fo...    48   0.45   1
(CE053647) tigr-gss-dog-17000358573053 Dog Library Canis lup...    48   0.45   1
(BZ295874) CG1731.f11 Candida glabrata Random Genomic Librar...    48   0.45   1
(BH989416) oed22f08.b1 B.oleracea002 Brassica oleracea genom...    48   0.45   1
(AG460718) Mus musculus molossinus DNA, clone:MSMg01-348K21....    48   0.45   1
(AG279485) Mus musculus molossinus DNA, clone:MSMg01-050G05....    48   0.45   1
(EG674450) RCRAB17TO Castor bean cDNA library from roots, 1....    48   0.45   1
(EG667491) RCRC144TO Castor bean cDNA library from roots, 1....    48   0.45   1
(EG665013) RCLGR36TP Castor bean cDNA library from leaves, 1...    48   0.45   1
(EG660399) RCLE338TO Castor bean cDNA library from leaves, 1...    48   0.45   1
(EE115329) G613P6349RG9.T0 Acorn worm blastula/gastrula pCMV...    48   0.45   1
(EE115268) G613P6342RG12.T0 Acorn worm blastula/gastrula pCM...    48   0.45   1
(EE112736) G178P60129RC5.T0 Acorn worm gastrula/neurula pCMV...    48   0.45   1
(EE112359) G178P60057RA11.T0 Acorn worm gastrula/neurula pCM...    48   0.45   1
(EB037793) lk_hhL3_0002o09.pDNRF2 lk_hhL3 Hippoglossus hippo...    48   0.45   1
(DV129603) CV03054B1B02.f1 CV03-normalized library Euphorbia...    48   0.45   1
(DN977111) SV5_39A05_SV5_39M_033 SV5 Solanum chacoense cDNA,...    48   0.45   1
(CK166042) FGAS050093 Triticum aestivum FGAS: TaLt7 Triticum...    48   0.45   1
(CJ678141) Triticum aestivum cDNA clone whok11h24 5', Y.Ogih...    48   0.45   1
(CJ496796) Triticum aestivum cDNA clone whfl23d10 5', Y.Ogih...    48   0.45   1
(CJ496748) Triticum aestivum cDNA clone whfl23a15 5', Y.Ogih...    48   0.45   1
(CD939873) OV.115K12F010313 OV Triticum aestivum cDNA clone ...    48   0.45   1
(CD937826) OV.108D13F010206 OV Triticum aestivum cDNA clone ...    48   0.45   1
(CA913936) PCSC07364 Scarlet Runner Bean Suspensor Region Tr...    48   0.45   1
(CA785783) sat39b08.y1 Gm-c1056 Glycine soja cDNA clone SOYB...    48   0.45   1
(AI495106) sb03e04.y1 Gm-c1004 Glycine max cDNA clone GENOME...    48   0.45   1
(BQ753244) WHE4124_F12_L24ZS Wheat salt-stressed root cDNA l...    48   0.45   1
(BM521652) sak60e10.y1 Gm-c1036 Glycine max cDNA clone SOYBE...    48   0.45   1
(BM309505) sak63d07.y1 Gm-c1036 Glycine max cDNA clone SOYBE...    48   0.45   1
(BM307511) sak30b07.y1 Gm-c1075 Glycine max cDNA clone SOYBE...    48   0.45   1
(BJ305074) Triticum aestivum cDNA clone:whyd28k12, 5' end, s...    48   0.45   1
(BJ212207) Triticum aestivum cDNA clone:wh35e22, 5' end, sin...    48   0.45   1
(BG653722) sad54a02.y2 Gm-c1075 Glycine max cDNA clone GENOM...    48   0.45   1
(BG237694) sab16f05.y1 Gm-c1071 Glycine max cDNA clone GENOM...    48   0.45   1
(BF199971) WHE2251_D08_G15ZE Triticum monococcum vegetative ...    48   0.45   1
(BE474213) sp60e09.y1 Gm-c1044 Glycine max cDNA clone GENOME...    48   0.45   1
(GE561322) CCHT19356.b1_H15.ab1 CCHT Niger Seed Guizotia aby...    48   0.45   1
(FM020002) Dicentrarchus labrax EST, clone cDN31P0002F15, 5'...    48   0.45   1
(FK370048) 454GmaGlobSeed104680 Soybean Seeds Containing Glo...    48   0.45   1
(FG650189) G1142P32FF14.T0 Anolis carolinensis pooled normal...    48   0.45   1
(FE512941) CAOU8190.rev CAOU Selaginella moellendorffii mixe...    48   0.45   1
(FE509645) CAOU15660.fwd CAOU Selaginella moellendorffii mix...    48   0.45   1
(FE505694) CAOU13547.fwd CAOU Selaginella moellendorffii mix...    48   0.45   1
(FE487595) CAOT2461.rev CAOT Selaginella moellendorffii mixe...    48   0.45   1
(FE474549) CAOS5016.rev CAOS Selaginella moellendorffii mixe...    48   0.45   1
(FE472208) CAOS3870.rev CAOS Selaginella moellendorffii mixe...    48   0.45   1
(FE453175) CAOS16784.rev CAOS Selaginella moellendorffii mix...    48   0.45   1
(FE446086) CAOS12638.rev CAOS Selaginella moellendorffii mix...    48   0.45   1
(FE436172) CAOP6770.rev CAOP Selaginella moellendorffii mixe...    48   0.45   1
(FE070817) LV_ES_RA51N11f Litopenaeus vannamei eyestalk cDNA...    48   0.45   1
(FD710704) CAAA1613.fwd CAAA Petromyzon marinus Petromyzon m...    48   0.45   1
(EY292675) CAWX10688.fwd CAWX Helobdella robusta Primary Ear...    48   0.45   1
(EX882799) CcLXCa38o11n1 ECC Cyprinus carpio cDNA clone 38o1...    48   0.45   1
(CP000789) Vibrio harveyi ATCC BAA-1116 chromosome I, comple...    48   0.45   1
(CQ329062) Sequence 3156 from Patent WO0157275.                    34   0.49   3
(CQ292012) Sequence 3117 from Patent WO0186003.                    34   0.49   3
(CQ254933) Sequence 3194 from Patent WO0157277.                    34   0.49   3
(CQ216362) Sequence 3201 from Patent WO0157273.                    34   0.49   3
(CQ200860) Sequence 3137 from Patent WO0157271.                    34   0.49   3
(CQ171725) Sequence 3121 from Patent WO0157274.                    34   0.49   3
(CQ133150) Sequence 3172 from Patent WO0157276.                    34   0.49   3
(CQ094368) Sequence 3227 from Patent WO0157272.                    34   0.49   3
(CQ067322) Sequence 3122 from Patent WO0157278.                    34   0.49   3
(CQ052265) Sequence 3085 from Patent WO0157270.                    34   0.49   3
(AC201440) Strongylocentrotus purpuratus clone R3-3019L20, W...    46   0.66   2
(AC174171) Strongylocentrotus purpuratus clone R3-46A14, WOR...    46   0.66   2
(EE703266) AGENCOURT_90082016 NIH_ZGC_28 Danio rerio cDNA cl...    38   0.69   2
(CA916185) PCSC09833 Scarlet Runner Bean Suspensor Region Tr...    38   0.69   2
(AC173942) Callicebus moloch clone LB5-172A20, WORKING DRAFT...    46   0.71   2
(GC702177) Sequence 17422 from patent US 6812339.                  44   0.72   2
(AC009783) Homo sapiens chromosome 7 clone RP11-14M12, compl...    44   0.74   2
(AC176772) Strongylocentrotus purpuratus clone R3-3104F09, W...    40   0.74   3
(AC119299) Rattus norvegicus clone CH230-312O10, WORKING DRA...    40   0.75   3
(CQ522980) Sequence 54847 from Patent WO0160860.                   40   0.82   2
(AC018642) Homo sapiens chromosome 7 clone RP11-329I5, compl...    44   0.83   2
(AC105524) Rattus norvegicus clone CH230-212C17, *** SEQUENC...    46   0.87   2
(AC134030) Rattus norvegicus clone CH230-192O5, WORKING DRAF...    46   0.88   2
(AC126092) Rattus norvegicus clone CH230-188K15, WORKING DRA...    46   0.91   2
(AC126651) Rattus norvegicus clone CH230-219A19, *** SEQUENC...    36   0.93   2
(AC097136) Rattus norvegicus clone CH230-129B23, WORKING DRA...    44   0.93   2
(AC178773) Strongylocentrotus purpuratus clone R3-3001N01, W...    46   0.94   2
(AC125556) Rattus norvegicus clone CH230-7P11, WORKING DRAFT...    46   0.94   2
(AC098499) Rattus norvegicus clone CH230-35E20, WORKING DRAF...    36   0.94   2
(AC139488) Homo sapiens chromosome 5 clone RP11-764C13, WORK...    36   0.95   2
(AC087188) Homo sapiens chromosome 16 clone RP11-345M22, com...    36   0.95   2
(AC158542) Pan troglodytes BAC clone CH251-262O17 from chrom...    34   0.95   2
(AC186557) Pan troglodytes BAC clone CH251-51L5 from chromos...    34   0.95   2
(AP003967) Homo sapiens genomic DNA, chromosome 11 clone:RP1...    34   0.95   2
(AC168388) Strongylocentrotus purpuratus clone R3-4013A15, W...    46   0.96   2
(FC285343) CAGN27259.rev CAGN Nematostella vectensis Nemve m...    42   0.96   2
(AC140113) Homo sapiens PAC clone RP1-85D24 from Y, complete...    34   0.96   2
(AC174868) Pan troglodytes BAC clone CH251-401P11 from chrom...    34   0.96   2
(AC177736) Strongylocentrotus purpuratus clone R3-1008J4, WO...    34   0.97   2
(AL606930) Mouse DNA sequence from clone RP23-131D5 on chrom...    34   0.97   2
(AC176830) Strongylocentrotus purpuratus clone R3-3111P12, W...    36   0.97   2
(AC180517) Strongylocentrotus purpuratus clone R3-3099B15, W...    46   0.98   2

>(BJ401302) Dictyostelium discoideum cDNA clone:dds22f21, 3' end,
           single read.
          Length = 700

 Score =  396 bits (200), Expect(3) = 0.0
 Identities = 200/200 (100%)
 Strand = Plus / Minus


Query: 500 gtagtaaataaattacctattgaaagttctgatgacgatagttatcagtcagcatccagt 559
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtagtaaataaattacctattgaaagttctgatgacgatagttatcagtcagcatccagt 142


Query: 560 ggtgattcaagtgatgattatcaaacagcatctgaacatgaatcagaatcagaatcagaa 619
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ggtgattcaagtgatgattatcaaacagcatctgaacatgaatcagaatcagaatcagaa 82


Query: 620 ccagaaatatataaatcagatgatggtgaagaagaacaaatgaacaagaatttaagatac 679
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  ccagaaatatataaatcagatgatggtgaagaagaacaaatgaacaagaatttaagatac 22


Query: 680 caagtaagaataataaaaga 699
           ||||||||||||||||||||
Sbjct: 21  caagtaagaataataaaaga 2

 Score =  230 bits (116), Expect(3) = 0.0
 Identities = 116/116 (100%)
 Strand = Plus / Minus


Query: 377 gatggagatgttgttagtggtggtggtagtggtgataatgatgatgaaggtaataataaa 436
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gatggagatgttgttagtggtggtggtagtggtgataatgatgatgaaggtaataataaa 265


Query: 437 ataccttcaagaaaatcaataaattctatgacaccaaagagaccagcaagatcatc 492
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ataccttcaagaaaatcaataaattctatgacaccaaagagaccagcaagatcatc 209

 Score =  133 bits (67), Expect(3) = 0.0
 Identities = 67/67 (100%)
 Strand = Plus / Minus


Query: 50  gcatgtcaatttcacagatcaagacgtcataagtgtccggaagattgtaaagatagaata 109
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gcatgtcaatttcacagatcaagacgtcataagtgtccggaagattgtaaagatagaata 592


Query: 110 ccattag 116
           |||||||
Sbjct: 591 ccattag 585

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 514,910,761
Number of extensions: 34670275
Number of successful extensions: 3362537
Number of sequences better than 10.0: 3052
Length of query: 699
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 675
Effective length of database: 99,340,224,878
Effective search space: 67054651792650
Effective search space used: 67054651792650
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.29
Homology vs Protein 
Query= Contig-U03737-1 (Contig-U03737-1Q) /CSM_Contig/Contig-U03737-1Q.Seq.d
         (699 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 486,018,363
Number of extensions: 5436853
Number of successful extensions: 12527
Number of sequences better than 10.0: 0
Number of HSP's gapped: 12511
Number of HSP's successfully gapped: 0
Length of query: 233
Length of database: 1,061,185,681
Length adjustment: 125
Effective length of query: 108
Effective length of database: 652,629,681
Effective search space: 70484005548
Effective search space used: 70484005548
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
PSORT 

 psg: 0.48  gvh: 0.20  alm: 0.70  top: 0.53  tms: 0.00  mit: 0.48  mip: 0.05
 nuc: 0.02  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.33  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: nuclear
	 36.0 %: mitochondrial
	  8.0 %: cytoplasmic
	  4.0 %: cytoskeletal

>> prediction for Contig-U03737-1 is nuc
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0