Contig-U03706-1
Contig ID Contig-U03706-1
Contig update 2001. 8.29
Contig sequence
>Contig-U03706-1 (Contig-U03706-1Q) /CSM_Contig/Contig-U03706-1Q.Seq.d
ATTTGTCTAAAATATATTTATTTTATAAAATAATCCAAATATGTCATTTT
CAATACCACCATTAAGTAGTATTGGTAGCCATAACAATAATAAAAATAAT
AATAATAACAATAATAATAATAGTAATAATAATAATTCACATGCACCAAG
AACCTCAATAAAGAAAAGTCATAAAGAATCAATTATTGGAACCAATGATG
ATGCAGCTTCATGTAAATTATCAGCAGTCAATGTTGGATATTATTCAGAC
CCATTTGTAAAATATTTTGTTAAACATCCAATTAGAAGACAACCATTAAT
CAATCGTGGTTTCTTTTCGAGAGTTGAATGTATTGAACAATTAGTATCAC
AATTCTTTACTCAATATAAAGATATAAATAAAAAACAAATCATTAGTTTA
GGTTGTGGTTTTGATACTTATTATTTTAGATTAATGAATAATAAAGATAT
TAAAAAGGATTTTATATATTTTGAAGTTGATTATGATCAAGTGATTAGTA
ATAAAATAAAGATAATTCAAAATCATAAAGAGTTGCAATCAATGATTGAT
CAAGAATGGGATAGTAAATATGATACGAATGAAAAGTTAGCATCAATGGT
AAATCATCAGAGAGTATCATCGAAATCATATAGAT

Gap no gap
Contig length 635
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 1296371
End point 1295734
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 2
Link to clone list U03706
List of clone(s)

est1=SFK166F,1,636
est2=SFK266F,1,601
Translated Amino Acid sequence
fv*nifil*NNPNMSFSIPPLSSIGSHNNNKNNNNNNNNNSNNNNSHAPRTSIKKSHKES
IIGTNDDAASCKLSAVNVGYYSDPFVKYFVKHPIRRQPLINRGFFSRVECIEQLVSQFFT
QYKDINKKQIISLGCGFDTYYFRLMNNKDIKKDFIYFEVDYDQVISNKIKIIQNHKELQS
MIDQEWDSKYDTNEKLASMVNHQRVSSKSYR


Translated Amino Acid sequence (All Frames)
Frame A:
iclkyiyfik*skyvifnttik*yw*p*q**k****q********ftctknlnkeks*ri
nywnq**csfm*iissqcwilfrpickifc*tsn*kttinqswflfes*my*tisitily
si*ryk*ktnh*frlwf*yllf*ine**ry*kgfyif*s*l*ssd***nkdnsks*rvai
nd*srmg**i*ye*kvsingkssesiieii*


Frame B:
fv*nifil*NNPNMSFSIPPLSSIGSHNNNKNNNNNNNNNSNNNNSHAPRTSIKKSHKES
IIGTNDDAASCKLSAVNVGYYSDPFVKYFVKHPIRRQPLINRGFFSRVECIEQLVSQFFT
QYKDINKKQIISLGCGFDTYYFRLMNNKDIKKDFIYFEVDYDQVISNKIKIIQNHKELQS
MIDQEWDSKYDTNEKLASMVNHQRVSSKSYR


Frame C:
lskiylfykiiqichfqyhh*vvlvaitiikiiiitiiiiviiiihmhqepq*rkviknq
llepmmmqlhvnyqqsmldiiqthl*nillniqlednh*sivvsfrelnvlnn*yhnsll
niki*iknkslv*vvvliliild**iikilkrilyilklimik*lvik*r*fkiikscnq
*likngivnmirmks*hqw*iireyhrnhid


own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U03706-1 (Contig-U03706-1Q)
/CSM_Contig/Contig-U03706-1Q.Seq.d
(635 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U03706-1 (Contig-U03706-1Q) /CSM_Contig/Conti... 989 0.0
Contig-U13776-1 (Contig-U13776-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U12756-1 (Contig-U12756-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U12594-1 (Contig-U12594-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U11442-1 (Contig-U11442-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U09742-1 (Contig-U09742-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U09691-1 (Contig-U09691-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U14900-1 (Contig-U14900-1Q) /CSM_Contig/Conti... 36 0.044
Contig-U13428-1 (Contig-U13428-1Q) /CSM_Contig/Conti... 36 0.044
Contig-U12728-1 (Contig-U12728-1Q) /CSM_Contig/Conti... 36 0.044

>Contig-U03706-1 (Contig-U03706-1Q) /CSM_Contig/Contig-U03706-1Q.Seq.d
Length = 635

Score = 989 bits (499), Expect = 0.0
Identities = 499/499 (100%)
Strand = Plus / Plus


Query: 137 tcacatgcaccaagaacctcaataaagaaaagtcataaagaatcaattattggaaccaat 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tcacatgcaccaagaacctcaataaagaaaagtcataaagaatcaattattggaaccaat 196


Query: 197 gatgatgcagcttcatgtaaattatcagcagtcaatgttggatattattcagacccattt 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gatgatgcagcttcatgtaaattatcagcagtcaatgttggatattattcagacccattt 256


Query: 257 gtaaaatattttgttaaacatccaattagaagacaaccattaatcaatcgtggtttcttt 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gtaaaatattttgttaaacatccaattagaagacaaccattaatcaatcgtggtttcttt 316


Query: 317 tcgagagttgaatgtattgaacaattagtatcacaattctttactcaatataaagatata 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tcgagagttgaatgtattgaacaattagtatcacaattctttactcaatataaagatata 376


Query: 377 aataaaaaacaaatcattagtttaggttgtggttttgatacttattattttagattaatg 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aataaaaaacaaatcattagtttaggttgtggttttgatacttattattttagattaatg 436


Query: 437 aataataaagatattaaaaaggattttatatattttgaagttgattatgatcaagtgatt 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aataataaagatattaaaaaggattttatatattttgaagttgattatgatcaagtgatt 496


Query: 497 agtaataaaataaagataattcaaaatcataaagagttgcaatcaatgattgatcaagaa 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 agtaataaaataaagataattcaaaatcataaagagttgcaatcaatgattgatcaagaa 556


Query: 557 tgggatagtaaatatgatacgaatgaaaagttagcatcaatggtaaatcatcagagagta 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgggatagtaaatatgatacgaatgaaaagttagcatcaatggtaaatcatcagagagta 616


Query: 617 tcatcgaaatcatatagat 635
|||||||||||||||||||
Sbjct: 617 tcatcgaaatcatatagat 635


Score = 159 bits (80), Expect = 4e-39
Identities = 80/80 (100%)
Strand = Plus / Plus


Query: 1 atttgtctaaaatatatttattttataaaataatccaaatatgtcattttcaataccacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttgtctaaaatatatttattttataaaataatccaaatatgtcattttcaataccacc 60


Query: 61 attaagtagtattggtagcc 80
||||||||||||||||||||
Sbjct: 61 attaagtagtattggtagcc 80


Score = 32.2 bits (16), Expect = 0.69
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 18 ttattttataaaataa 33
||||||||||||||||
Sbjct: 33 ttattttataaaataa 18


>Contig-U13776-1 (Contig-U13776-1Q) /CSM_Contig/Contig-U13776-1Q.Seq.d
Length = 792

Score = 38.2 bits (19), Expect = 0.011
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 437 aataataaagatattaaaa 455
|||||||||||||||||||
Sbjct: 669 aataataaagatattaaaa 687


>Contig-U12756-1 (Contig-U12756-1Q) /CSM_Contig/Contig-U12756-1Q.Seq.d
Length = 208

Score = 38.2 bits (19), Expect = 0.011
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 364 atataaagatataaataaa 382
|||||||||||||||||||
Sbjct: 32 atataaagatataaataaa 50


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,538
Number of Sequences: 6905
Number of extensions: 16538
Number of successful extensions: 1849
Number of sequences better than 10.0: 212
length of query: 635
length of database: 5,674,871
effective HSP length: 16
effective length of query: 619
effective length of database: 5,564,391
effective search space: 3444358029
effective search space used: 3444358029
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 6. 6
Homology vs DNA
Query= Contig-U03706-1 (Contig-U03706-1Q) /CSM_Contig/Contig-U03706-1Q.Seq.d
(635 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ390201) Dictyostelium discoideum cDNA clone:dds21c17, 5' ... 989 0.0 2
(BJ390202) Dictyostelium discoideum cDNA clone:dds21c18, 5' ... 922 0.0 2
(AC006280) Plasmodium falciparum chromosome 12 clone PFYAC72... 38 8e-05 9
(AX344559) Sequence 10 from Patent WO0200932. 52 3e-04 9
(AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7... 36 0.003 10
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 40 0.005 10
(AC004153) Plasmodium falciparum chromosome 12 clone PFYAC81... 40 0.006 8
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI... 40 0.008 7
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ... 38 0.009 10
(AC106500) Rattus norvegicus clone CH230-188I12, WORKING DRA... 52 0.011 4
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4... 36 0.012 9
(CC130889) NDL.68L5.SP6 Notre Dame Liverpool Aedes aegypti g... 48 0.013 2
(AL844506) Plasmodium falciparum chromosome 7. 36 0.017 10
(DD010735) Diagnosis of known genetic Parameters within the ... 52 0.026 1
(AX344558) Sequence 9 from Patent WO0200932. 52 0.026 1
(AC125569) Rattus norvegicus clone CH230-8E24, *** SEQUENCIN... 52 0.026 1
(EH650744) EST01624 Paracoccidioides brasiliensis pCMV-SPORT... 52 0.026 1
(AE014850) Plasmodium falciparum 3D7 chromosome 12, section ... 32 0.030 12
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 38 0.031 11
(AL929516) Zebrafish DNA sequence from clone CH211-10C20 in ... 44 0.040 3
(AL844507) Plasmodium falciparum chromosome 8. 34 0.041 10
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 34 0.051 17
(AC159551) Bos taurus clone CH240-69D11, WORKING DRAFT SEQUE... 40 0.062 2
(FK913351) EST_lsal_evj_934504 lsalevj mixed_tissue_mixed_st... 38 0.062 2
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 38 0.063 7
(AC163157) Bos taurus clone CH240-69C10, WORKING DRAFT SEQUE... 40 0.063 2
(AC222919) Bos taurus clone CH240-434L12, WORKING DRAFT SEQU... 40 0.064 2
(AC108895) Bos taurus clone RP42-88B14, WORKING DRAFT SEQUEN... 40 0.068 5
(CU571363) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 0.074 7
(BX004839) Zebrafish DNA sequence from clone DKEY-18A23 in l... 42 0.077 6
(CU498831) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 0.083 6
(FH941277) CHO_OF6728xj20r1.ab1 CHO_OF6 Nicotiana tabacum ge... 30 0.098 4
(ED720781) GM_WBb0073B13.f GM_WBb Glycine max genomic clone ... 50 0.10 1
(CZ523273) GMW2-73B13a.b1 GMW2 Glycine max genomic, genomic ... 50 0.10 1
(AG448879) Mus musculus molossinus DNA, clone:MSMg01-333A02.... 50 0.10 1
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s... 36 0.10 12
(DX534630) GH_MBb0041O08f GH_MBb Gossypium hirsutum genomic ... 34 0.13 3
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 38 0.13 12
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com... 38 0.13 12
(DN336848) LIB3187-026-P1-K1-C2 LIB3187 Canis lupus familiar... 36 0.15 3
(CT737388) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.16 5
(X95276) Plasmodium falciparum complete gene map of plastid-... 34 0.16 5
(AM455366) Vitis vinifera contig VV78X059333.2, whole genome... 36 0.17 3
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s... 34 0.18 9
(AC121841) Mus musculus BAC clone RP24-80D5 from chromosome ... 40 0.19 3
(AC004709) Plasmodium falciparum chromosome 12, *** SEQUENCI... 38 0.20 8
(AL035476) Plasmodium falciparum MAL4P3. 34 0.21 9
(BV614052) S216P6696RC5.T0 Masuku Pan troglodytes troglodyte... 44 0.22 2
(AC226470) Oryctolagus cuniculus clone LB1-305E23, WORKING D... 34 0.24 2
(FH149767) CHO_OF3048xn06f1.ab1 CHO_OF3 Nicotiana tabacum ge... 36 0.24 3
(FH448300) CHO_OF4709xk21f1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 0.25 3
(AC083950) Homo sapiens BAC clone RP11-240P14 from 2, comple... 48 0.25 4
(AE014833) Plasmodium falciparum 3D7 chromosome 10 section 5... 34 0.25 8
(BD061520) Genome DNA of symbiotic bacteria of aphid. 34 0.29 12
(AR409405) Sequence 1 from patent US 6632935. 34 0.29 12
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum... 34 0.29 12
(CP001161) Buchnera aphidicola str. 5A (Acyrthosiphon pisum)... 34 0.29 12
(CS468864) Sequence 55 from Patent EP1748080. 36 0.30 8
(CS468863) Sequence 54 from Patent EP1748080. 36 0.30 8
(CS419341) Sequence 55 from Patent WO2006094836. 36 0.30 8
(CS419340) Sequence 54 from Patent WO2006094836. 36 0.30 8
(AL844501) Plasmodium falciparum strain 3D7, chromosome 1. 36 0.32 13
(AC173737) Strongylocentrotus purpuratus clone R3-3001N2, WO... 34 0.35 5
(AC189464) Brassica rapa subsp. pekinensis clone KBrB075L03,... 42 0.35 4
(AE014829) Plasmodium falciparum 3D7 chromosome 10 section 1... 34 0.37 11
(AC146205) Pan troglodytes BAC clone RP43-34B6 from chromoso... 40 0.37 6
(BX005245) Zebrafish DNA sequence from clone DKEY-56M15 in l... 38 0.39 5
(AC158158) Mus musculus chromosome 1, clone RP23-10D8, compl... 48 0.41 1
(AC125452) Mus musculus, clone RP23-43F6, complete sequence. 48 0.41 1
(AC114560) Mus musculus chromosome 15, clone RP23-54K6, comp... 48 0.41 1
(AC110266) Mus musculus chromosome 1, clone RP23-319C1, comp... 48 0.41 1
(AC182428) Pan troglodytes BAC clone CH251-637G21 from chrom... 48 0.41 1
(AM473234) Vitis vinifera contig VV78X078648.6, whole genome... 48 0.41 1
(AM453037) Vitis vinifera contig VV78X255915.8, whole genome... 48 0.41 1
(AM423295) Vitis vinifera contig VV78X198088.9, whole genome... 48 0.41 1
(AC173960) Glycine max clone gmw1-45c9, complete sequence. 48 0.41 1
(AC100817) Homo sapiens chromosome 8, clone RP11-936G2, comp... 48 0.41 1
(AC097123) Rattus norvegicus clone CH230-59D22, *** SEQUENCI... 48 0.41 1
(AC094522) Rattus norvegicus clone CH230-4L4, WORKING DRAFT ... 48 0.41 1
(CE194994) tigr-gss-dog-17000371493850 Dog Library Canis lup... 48 0.41 1
(BU676441) UI-CF-DU1-aag-n-16-0-UI.s1 UI-CF-DU1 Homo sapiens... 48 0.41 1
(FG863433) UCRVU07_CCNP1946_g1 Cowpea UCR 779 Mixed Tissue a... 48 0.41 1
(AP009486) Macrococcus caseolyticus JCSC5402 plasmid pMCCL2 ... 48 0.41 1
(CP000976) Borrelia duttonii Ly, complete genome. 32 0.42 14
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 32 0.43 11
(CR376823) Zebrafish DNA sequence from clone DKEY-106M8 in l... 42 0.44 2
(AC208936) Populus trichocarpa clone JGIACSB1085-D10, comple... 42 0.45 3
(AJ511533) Candida glabrata complete mitochondrial genome. 36 0.47 6
(CP000255) Staphylococcus aureus subsp. aureus USA300_FPR375... 34 0.50 18
(CP000730) Staphylococcus aureus subsp. aureus USA300_TCH151... 34 0.50 18
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s... 38 0.53 9
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7... 36 0.58 10
(AC165519) Bos taurus clone CH240-171J18, WORKING DRAFT SEQU... 34 0.63 6
(CU656035) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.63 4
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 32 0.64 15
(AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3... 32 0.67 9
(BX649271) Zebrafish DNA sequence from clone DKEY-45G1 in li... 40 0.67 3
(FB571377) Sequence 244 from Patent EP1865317. 34 0.67 6
(FB571321) Sequence 188 from Patent EP1865317. 34 0.67 6
(AE014848) Plasmodium falciparum 3D7 chromosome 12, section ... 36 0.68 9
(AE014830) Plasmodium falciparum 3D7 chromosome 10 section 2... 40 0.70 8
(AC210385) Populus trichocarpa clone POP037-E20, complete se... 42 0.72 5
(EF154459) Romanomermis culicivorax mitochondrion, complete ... 34 0.75 4
(CP000963) Clostridium botulinum A3 str. Loch Maree plasmid ... 36 0.78 7
(AX392736) Sequence 26 from Patent WO0212526. 30 0.78 7
(AR707083) Sequence 26 from patent US 6933145. 30 0.78 7
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2... 32 0.80 9
(AC051628) Homo sapiens chromosome 6 clone RP11-289I10, WORK... 34 0.87 2
(AL356260) Human DNA sequence *** SEQUENCING CANCELLED *** f... 34 0.87 2
(AL359714) Human DNA sequence from clone RP11-22A15 on chrom... 34 0.87 2
(AC022926) Homo sapiens chromosome 6 clone RP11-275G6 map 6,... 34 0.88 2
(FB571360) Sequence 227 from Patent EP1865317. 40 0.94 4
(FB571304) Sequence 171 from Patent EP1865317. 40 0.94 4
(U73774) Pleurocera prasinatum 16S ribosomal RNA gene, mitoc... 36 0.94 2
(EK229417) 1095460173113 Global-Ocean-Sampling_GS-31-01-01-1... 42 1.0 2
(AL512745) Homo sapiens genomic DNA; cDNA DKFZp547C014 (from... 34 1.1 2
(AC208312) Populus trichocarpa clone JGIACSB17-D05, complete... 40 1.1 5
(AC041018) Homo sapiens chromosome 4 clone RP11-478O20 map 4... 36 1.2 5
(AM471898) Vitis vinifera, whole genome shotgun sequence, co... 42 1.2 4
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 40 1.3 21
(CU062486) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 1.3 5
(AC137675) Homo sapiens chromosome 3 clone RP11-358O21, comp... 42 1.3 5
(AF041424) Plasmodium falciparum subclone R9 variant surface... 30 1.3 5
(AF041423) Plasmodium falciparum subclone R5 variant surface... 30 1.3 5
(AF041422) Plasmodium falciparum subclone R5 variant surface... 30 1.4 5
(AJ581527) Fowlpox virus (isolate HP-438[Munich]), passage 4... 38 1.4 6
(EA292620) Sequence 1 from patent US 7273605. 38 1.4 6
(DD211553) Vaccine. 38 1.4 6
(CQ970872) Sequence 10 from Patent WO2004108940. 38 1.4 6
(CQ970871) Sequence 9 from Patent WO2004108940. 38 1.4 6
(AC179335) Strongylocentrotus purpuratus clone R3-57J5, WORK... 38 1.5 3
(AM440023) Vitis vinifera contig VV78X184339.5, whole genome... 36 1.5 4
(AX347076) Sequence 2147 from Patent WO0200928. 36 1.5 6
(AJ294725) Astasia longa complete chloroplast genome. 36 1.5 7
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6... 30 1.6 10
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 34 1.6 10
(AC196187) Trichinella spiralis BAC clone TS195-17H12 from c... 36 1.6 6
(CR394562) Zebrafish DNA sequence from clone CH211-284D14 in... 46 1.6 1
(CR354613) Zebrafish DNA sequence from clone CH211-112G7 in ... 46 1.6 1
(CR354383) Zebrafish DNA sequence from clone CH211-123O7 in ... 46 1.6 1
(BX649377) Zebrafish DNA sequence from clone CH211-196J1 in ... 46 1.6 1
(BX569779) Zebrafish DNA sequence from clone CH211-113I9 in ... 46 1.6 1
(AL935047) Zebrafish DNA sequence from clone DKEY-20L10. 46 1.6 1
(AL672192) Zebrafish DNA sequence from clone BUSM1-87I4 Cont... 46 1.6 1
(AL592562) Zebrafish DNA sequence from clone XX-85C7 in link... 46 1.6 1
(AU028331) Rattus norvegicus, OTSUKA clone, OT52.38/864c12, ... 46 1.6 1
(AC127027) Mus musculus chromosome 5, clone RP23-236G19, com... 46 1.6 1
(AC187753) Pan troglodytes BAC clone CH251-669J7 from chromo... 46 1.6 1
(AM486819) Vitis vinifera, whole genome shotgun sequence, co... 46 1.6 1
(AM470227) Vitis vinifera contig VV78X065546.2, whole genome... 46 1.6 1
(AM453473) Vitis vinifera contig VV78X088399.5, whole genome... 46 1.6 1
(AM439395) Vitis vinifera contig VV78X144819.18, whole genom... 46 1.6 1
(AM423442) Vitis vinifera contig VV78X171925.8, whole genome... 46 1.6 1
(AL355001) Human DNA sequence from clone RP11-61K9 on chromo... 46 1.6 1
(AL354808) Human DNA sequence from clone RP11-523H24 on chro... 46 1.6 1
(AC106793) Homo sapiens chromosome 16 clone RP11-410D17, com... 46 1.6 1
(AC091920) Homo sapiens chromosome 5 clone RP11-254G13, comp... 46 1.6 1
(AC008548) Homo sapiens chromosome 5 clone CTC-505D13, compl... 46 1.6 1
(AC004413) Homo sapiens PAC clone RP4-650P9 from 7, complete... 46 1.6 1
(AC136958) Rattus norvegicus clone CH230-11I18, *** SEQUENCI... 46 1.6 1
(AC135833) Danio rerio strain Tue clone CH211-201G20, WORKIN... 46 1.6 1
(AC131629) Rattus norvegicus clone CH230-52H21, *** SEQUENCI... 46 1.6 1
(AC128911) Rattus norvegicus clone CH230-326J5, *** SEQUENCI... 46 1.6 1
(AC118891) Rattus norvegicus clone CH230-468E11, *** SEQUENC... 46 1.6 1
(AC111876) Rattus norvegicus clone CH230-222B19, *** SEQUENC... 46 1.6 1
(CU928467) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.6 1
(CU915705) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.6 1
(AC087405) Homo sapiens chromosome 11 clone RP4-592P18 map 1... 46 1.6 1
(CU466385) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.6 1
(BX936310) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 1.6 1
(AC023974) Homo sapiens clone RP11-14L4, WORKING DRAFT SEQUE... 46 1.6 1
(AC008606) Homo sapiens chromosome 5 clone CTB-112M15, WORKI... 46 1.6 1
(AZ695100) UP_523-24H_T7 RPCI11 Human Male BAC Library Homo ... 46 1.6 1
(AQ527448) RPCI-11-366J4.TJ RPCI-11 Homo sapiens genomic clo... 46 1.6 1
(FH086677) CHO_OF3715xj08r1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 1.6 1
(ET233456) S0452L19_T7 CHORI-214 Salmo salar genomic clone S... 46 1.6 1
(ER446158) 1092963830050 Global-Ocean-Sampling_GS-35-01-01-1... 46 1.6 1
(ER402744) 1095351030866 Global-Ocean-Sampling_GS-34-01-01-1... 46 1.6 1
(ER392132) 1095333013586 Global-Ocean-Sampling_GS-34-01-01-1... 46 1.6 1
(EK533118) 1095516016648 Global-Ocean-Sampling_GS-32-01-01-1... 46 1.6 1
(EK526477) 1095515644421 Global-Ocean-Sampling_GS-32-01-01-1... 46 1.6 1
(EI866761) CAH1-30D18TV CAA1Ba Cicer arietinum genomic clone... 46 1.6 1
(EI398700) MUGQ_CH252P214I10T7_CN343_039 CHORI-252 Vervet Mo... 46 1.6 1
(ED442047) AUAC-aah79h12.g1 Ascaris suum whole genome shotgu... 46 1.6 1
(ED290227) AUAC-aag05g08.b1 Ascaris suum whole genome shotgu... 46 1.6 1
(ED200696) AUAC-aai69h12.g1 Ascaris suum whole genome shotgu... 46 1.6 1
(DX580189) SBA002_E20.f Sugar beet BAC library USH20 (Code S... 46 1.6 1
(DX537334) GH_MBb0082M12f GH_MBb Gossypium hirsutum genomic ... 46 1.6 1
(DU949264) 213892 Tomato MboI BAC Library Solanum lycopersic... 46 1.6 1
(CZ536606) SRAA-aad04c05.b1 Strongyloides ratti whole genome... 46 1.6 1
(CZ533790) SRAA-aac87d02.b1 Strongyloides ratti whole genome... 46 1.6 1
(CU966245) Brassica napus GSS, clone JBnB167K05, end read, p... 46 1.6 1
(ES349014) C09_PPINFM_P24 P. papatasi adult female blood fed... 46 1.6 1
(EL926874) NY4Tr1_3_D02.b1_A039 NY4 trophonts (NY4Tr1) Ichth... 46 1.6 1
(DW781659) MSAM156148_1942_1068 LCM-dissected maize shoot ap... 46 1.6 1
(CV159164) HISTERID6POLYT_B04_1_029 Hister sp. cDNA Hister s... 46 1.6 1
(CV159144) HISTERID5POLYT_G12_1_088 Hister sp. cDNA Hister s... 46 1.6 1
(CV158948) HISTERID3POLYTR2_E10_1_071 Hister sp. cDNA Hister... 46 1.6 1
(CV158878) HISTERID3POLYTR1_E10_1_087 Hister sp. cDNA Hister... 46 1.6 1
(CJ403828) Molgula tectiformis cDNA, gonad clone:mtgd008l11,... 46 1.6 1
(CJ393186) Molgula tectiformis cDNA, gonad clone:mtgd008l11,... 46 1.6 1
(CJ383728) Molgula tectiformis cDNA, gastrula/neurula clone:... 46 1.6 1
(CJ373133) Molgula tectiformis cDNA, gastrula/neurula clone:... 46 1.6 1
(CJ362703) Molgula tectiformis cDNA, cleaving embryo clone:m... 46 1.6 1
(CJ352240) Molgula tectiformis cDNA, cleaving embryo clone:m... 46 1.6 1
(CJ346980) Molgula tectiformis cDNA, cleaving embryo clone:m... 46 1.6 1
(FG603520) PF_T3_53R_B11_15AUG2003_093 Opium poppy root cDNA... 46 1.6 1
(FG599750) PF_T3_05R_A07_25JUL2003_063 Opium poppy root cDNA... 46 1.6 1
(FG599510) PF_T3_02R_D10_24JUL2003_074 Opium poppy root cDNA... 46 1.6 1
(EW689721) Q2_Javad_1EPTO_72_C02_019.F_006 Torpedo californi... 46 1.6 1
(EV409798) ALB_21B09_F AFAa_Sm Anopheles albimanus cDNA clon... 46 1.6 1
(AE014827) Plasmodium falciparum 3D7 chromosome 14 section 1... 34 1.7 10
(CU633161) H.numata DNA sequence from clone AEHN-43D2. 34 1.7 8
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 40 1.8 14
(AF050051) Pleurocera prasinatum strain 12A-1 16S ribosomal ... 36 1.8 2
(AF050053) Pleurocera prasinatum strain 12B-2 16S ribosomal ... 36 1.8 2
(AF050052) Pleurocera prasinatum strain 12B-1 16S ribosomal ... 36 1.8 2
(AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8... 36 1.8 8
(DQ642846) Plasmodium falciparum HB3 apicoplast, complete ge... 34 1.8 5
(X87631) P.falciparum putative plastid clpC gene (partial). 34 1.8 3
(AM439472) Vitis vinifera, whole genome shotgun sequence, co... 38 1.9 4
(AC114923) Mus musculus chromosome UNK clone RP23-207B10, WO... 34 1.9 7
(AC091116) Homo sapiens chromosome 18 clone RP11-887B5 map 1... 36 2.0 4
(AF198100) Fowlpox virus, complete genome. 38 2.0 6
(CU466950) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 2.0 6
(AE014851) Plasmodium falciparum 3D7 chromosome 12, section ... 34 2.1 8
(AM425555) Vitis vinifera contig VV78X087297.2, whole genome... 36 2.2 3
(AM481680) Vitis vinifera contig VV78X065751.4, whole genome... 36 2.2 3
(CR925677) Ehrlichia ruminantium str. Gardel, complete genome. 38 2.2 15
(CP000728) Clostridium botulinum F str. Langeland, complete ... 38 2.2 12
(AY962590) Candida orthopsilosis strain MCO456 mitochondrion... 36 2.3 3
(BX927109) Zebrafish DNA sequence from clone CH211-80D23 in ... 36 2.3 6
(FD446136) frog_2811 Chinese forest frog skin cDNA library R... 40 2.4 2
(CR388031) Zebrafish DNA sequence from clone CH211-192P3 in ... 36 2.4 6
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 40 2.4 5
(CT578051) Pinus pinaster bud EST. 40 2.4 2
(AC069020) Homo sapiens chromosome 10 clone RP11-165K20, com... 40 2.4 6
(CU570868) M.truncatula DNA sequence from clone MTH2-162A5 o... 38 2.5 4
(CT577303) Pinus pinaster bud EST. 40 2.5 2
(CP000925) Synthetic Mycoplasma genitalium JCVI-1.0, complet... 36 2.5 11
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 38 2.5 15
(CT582285) Pinus pinaster bud EST. 40 2.6 2
(AC198570) Spermophilus tridecemlineatus clone VMRC20-276J20... 34 2.6 5
(AM180355) Clostridium difficile 630 complete genome. 38 2.7 14
(CT033765) Medicago truncatula chromosome 5 clone mth2-105d2... 38 2.7 6
(CS468836) Sequence 27 from Patent EP1748080. 32 2.8 6
(CS419313) Sequence 27 from Patent WO2006094836. 32 2.8 6
(EJ783233) 1093017295336 Global-Ocean-Sampling_GS-30-02-01-1... 30 2.8 3
(AC146891) Dasypus novemcinctus clone VMRC5-364E4, complete ... 36 2.8 6
(FI189330) CccaBa002-G23TR CccABa Cajanus cajan genomic clon... 38 2.9 2
(AC114183) Rattus norvegicus clone CH230-230F6, *** SEQUENCI... 36 2.9 5
(FJ429371) Carica papaya clone 90D06, complete sequence. 44 2.9 7
(AR548313) Sequence 3444 from patent US 6747137. 38 2.9 2
(CR457451) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 32 3.0 2
(AX344552) Sequence 3 from Patent WO0200932. 32 3.0 2
(BX005250) Zebrafish DNA sequence from clone DKEY-35H6 in li... 32 3.1 2
(FM981909) Glossina morsitans morsitans EST, clone GMsg168f1... 36 3.1 2
(AP009351) Staphylococcus aureus subsp. aureus str. Newman D... 34 3.1 18
(AC186251) Oryctolagus cuniculus clone LB1-191L3, WORKING DR... 34 3.1 2
(AC171537) Bos taurus clone CH240-280L4, WORKING DRAFT SEQUE... 34 3.1 2
(AC012429) Homo sapiens clone RP11-8H23, WORKING DRAFT SEQUE... 34 3.2 2
(AC068405) Homo sapiens chromosome 11, clone RP11-71F16, com... 34 3.2 2
(AC188350) Oryctolagus cuniculus clone LB1-1B4, WORKING DRAF... 34 3.2 2
(AM855361) Crassostrea gigas EST, 5' end sequence, clone cDN... 36 3.2 2
(CP000551) Prochlorococcus marinus str. AS9601, complete gen... 36 3.2 16
(BX537261) Zebrafish DNA sequence from clone DKEY-73F6 in li... 32 3.2 2
(ET942208) CHO_OF620xk14r1.ab1 CHO_OF Nicotiana tabacum geno... 40 3.3 2
(AC013595) Homo sapiens chromosome 11, clone RP11-8L12, comp... 34 3.3 2
(CU856526) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 3.4 6
(AC189237) Brassica rapa subsp. pekinensis clone KBrB014O06,... 34 3.4 6
(AF100990) Pleurocera pyrenellum 16S ribosomal RNA gene, par... 36 3.5 2
(AF100993) Pleurocera unciale hastatum 16S ribosomal RNA gen... 36 3.5 2
(EK026312) 1092955367799 Global-Ocean-Sampling_GS-31-01-01-1... 36 3.5 2
(U73772) Pleurocera annuliferum 16S ribosomal RNA gene, mito... 36 3.5 2
(EK382973) 1095469469324 Global-Ocean-Sampling_GS-31-01-01-1... 38 3.5 2
(U73775) Pleurocera vestitum 16S ribosomal RNA gene, mitocho... 36 3.5 2
(AF101000) Leptoxis virgata 16S ribosomal RNA gene, partial ... 40 3.5 2
(U73773) Pleurocera prasinatum 16S ribosomal RNA gene, mitoc... 36 3.5 2
(AF100998) Lithasia armigera 16S ribosomal RNA gene, partial... 36 3.5 2
(AM454844) Vitis vinifera, whole genome shotgun sequence, co... 34 3.5 2
(AG573716) Mus musculus molossinus DNA, clone:MSMg01-497A22.... 38 3.5 2
(AL160151) Human DNA sequence from clone RP11-168G22 on chro... 36 3.5 5
(AC068161) Homo sapiens chromosome 3 clone RP11-151F4 map 3,... 36 3.6 6
(BX571777) Zebrafish DNA sequence from clone CH211-260F1 in ... 36 3.6 5
(CQ655070) Sequence 12027 from Patent WO0234771. 40 3.7 4
(EI827944) POTGN31TF Solanum tuberosum RHPOTKEY BAC ends Sol... 32 3.7 3
(AC014098) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 40 3.7 2
(CP000253) Staphylococcus aureus subsp. aureus NCTC 8325, co... 34 3.7 17
(AC105755) Homo sapiens BAC clone RP11-46H14 from 4, complet... 36 3.9 7
(AC186986) Canis familiaris chromosome 6, clone XX-302M17, c... 42 3.9 8
(BM393466) 50072-2-1-C04.r.1 Chilcoat/Turkewitz cDNA (large ... 40 4.0 2
(CP001205) Borrelia burgdorferi ZS7, complete genome. 34 4.0 12
(AC022981) Homo sapiens clone RP11-544A22, WORKING DRAFT SEQ... 32 4.0 7
(AM431245) Vitis vinifera contig VV78X259640.11, whole genom... 36 4.1 4
(CU856251) S.lycopersicum DNA sequence from clone LE_HBa-70F... 40 4.1 6
(AC116918) Dictyostelium discoideum chromosome 2 map 6143698... 34 4.1 4
(AE000783) Borrelia burgdorferi B31, complete genome. 34 4.1 12
(AC011278) Homo sapiens clone RP11-13K22, WORKING DRAFT SEQU... 34 4.1 7
(AC019256) Homo sapiens chromosome 4 clone RP11-426C17 map 4... 36 4.1 8
(ET763108) CHO_OF158xo11r1.ab1 CHO_OF Nicotiana tabacum geno... 32 4.2 2
(ER350879) 1092346006145 Global-Ocean-Sampling_GS-34-01-01-1... 32 4.2 2
(BD452609) Diagnosis of Diseases Associated with tumor suppr... 32 4.2 4
(AX251088) Sequence 56 from Patent WO0168912. 32 4.2 4
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 32 4.3 8
(DV968408) GC06405 Gracilaria changii cDNA library Gracilari... 32 4.3 3
(AC147198) Sus scrofa clone RP44-473F3, WORKING DRAFT SEQUEN... 36 4.4 5
(AL953904) Zebrafish DNA sequence from clone CH211-266I6. 36 4.4 5
(AC109686) Rattus norvegicus clone CH230-231D21, *** SEQUENC... 36 4.5 5
(CR854846) Zebrafish DNA sequence from clone DKEY-228N9 in l... 34 4.6 6
(AM447491) Vitis vinifera contig VV78X145763.3, whole genome... 36 4.6 3
(AX954530) Sequence 1376 from Patent WO03093306. 40 4.7 5
(AM463214) Vitis vinifera contig VV78X100143.8, whole genome... 40 4.7 3
(AC011640) Homo sapiens clone RP11-13H7, WORKING DRAFT SEQUE... 36 4.7 3
(EF526303) Pocillopora eydouxi mitochondrion, complete genome. 38 5.1 3
(CQ478145) Sequence 10012 from Patent WO0160860. 32 5.1 3
(BX649294) Zebrafish DNA sequence from clone CH211-223C9 in ... 36 5.2 6
(AM475530) Vitis vinifera contig VV78X006819.4, whole genome... 42 5.2 2
(AE014824) Plasmodium falciparum 3D7 chromosome 14 section 9... 32 5.3 9
(DV785510) HW_LIVER_53_F05 Bos taurus CF-24-HW liver cDNA li... 38 5.3 2
(AE014845) Plasmodium falciparum 3D7 chromosome 12, section ... 32 5.3 9
(AM444282) Vitis vinifera contig VV78X146903.2, whole genome... 38 5.4 3
(BD439871) Nucleotide Sequence of the Mycoplasma Genitalium ... 36 5.4 10
(AR300198) Sequence 1 from patent US 6537773. 36 5.4 10
(L43967) Mycoplasma genitalium G37, complete genome. 36 5.4 10
(CP000896) Acholeplasma laidlawii PG-8A, complete genome. 34 5.5 15
(AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3... 36 5.6 9
(AC193776) Solanum lycopersicum chromosome 1 clone C01HBa000... 34 5.7 4
(FB571382) Sequence 249 from Patent EP1865317. 32 5.8 7
(FB571326) Sequence 193 from Patent EP1865317. 32 5.8 7
(AC008913) Homo sapiens chromosome 5 clone CTD-2270A7, WORKI... 38 5.9 3
(AC172315) Strongylocentrotus purpuratus clone R3-14G3, WORK... 36 6.0 3
(AM479598) Vitis vinifera contig VV78X120883.14, whole genom... 38 6.1 4
(CR392349) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 6.1 7
(AM488526) Vitis vinifera contig VV78X117969.14, whole genom... 34 6.1 4
(CP000993) Borrelia recurrentis A1, complete genome. 32 6.2 13
(AC175071) Bos taurus clone CH240-238F22, WORKING DRAFT SEQU... 36 6.2 6
(AC224839) Bos taurus clone CH240-475B2, WORKING DRAFT SEQUE... 40 6.2 3
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 32 6.3 8
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 32 6.3 8
(AM487862) Vitis vinifera contig VV78X106188.7, whole genome... 34 6.3 4
(CT978957) Zebrafish DNA sequence from clone DKEY-204G14 in ... 44 6.4 1
(BX465184) Zebrafish DNA sequence from clone DKEY-20N10 in l... 44 6.4 1
(BX005380) Zebrafish DNA sequence from clone DKEY-82I20. 44 6.4 1
(AC187270) Gallus gallus BAC clone CH261-105E12 from chromos... 44 6.4 1
(AC187269) Gallus gallus BAC clone CH261-97N11 from chromoso... 44 6.4 1
(AL845340) Mouse DNA sequence from clone RP23-169D3 on chrom... 44 6.4 1
(AC160543) Mus musculus chromosome 1, clone RP23-186L22, com... 44 6.4 1
(AC132450) Mus musculus BAC clone RP23-187N8 from chromosome... 44 6.4 1
(AC129603) Mus musculus BAC clone RP23-63E1 from 18, complet... 44 6.4 1
(AC127356) Mus musculus BAC clone RP23-100B5 from chromosome... 44 6.4 1
(AC125253) Mus musculus chromosome 1, clone RP24-141C2, comp... 44 6.4 1
(AC122364) Mus musculus chromosome 8 clone RP23-442K12, comp... 44 6.4 1
(AC191698) Pan troglodytes BAC clone CH251-641G7 from chromo... 44 6.4 1
(AC161479) Pan troglodytes BAC clone CH251-168J1 from chromo... 44 6.4 1
(AC159464) Pan troglodytes BAC clone CH251-505P8 from chromo... 44 6.4 1
(CP000498) Pichia stipitis CBS 6054 chromosome 4, complete s... 44 6.4 1
(AM453643) Vitis vinifera contig VV78X247597.7, whole genome... 44 6.4 1
(AM446442) Vitis vinifera, whole genome shotgun sequence, co... 44 6.4 1
(AE016821) Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 44 6.4 1
(AC214628) Populus trichocarpa clone POP040-F15, complete se... 44 6.4 1
(DD278221) Genome DNA sequence of Ashbya gossypii and use th... 44 6.4 1
(DD277670) Genome DNA sequence of Ashbya gossypii and use th... 44 6.4 1
(A86433) Sequence 1092 from Patent EP0866129. 44 6.4 1
(A85882) Sequence 541 from Patent EP0866129. 44 6.4 1
(GN007890) Sequence 331 from Patent EP2014669. 44 6.4 1
(GC699466) Sequence 14711 from patent US 6812339. 44 6.4 1
(AR155926) Sequence 1092 from patent US 6239264. 44 6.4 1
(AR155375) Sequence 541 from patent US 6239264. 44 6.4 1
(AY230969) Pholcomma hirsutum 16S ribosomal RNA gene, partia... 44 6.4 1
(AY230967) Neottiura bimaculata 16S ribosomal RNA gene, part... 44 6.4 1
(AP000841) Homo sapiens genomic DNA, chromosome 11q clone:CM... 44 6.4 1
(AL356575) Human DNA sequence from clone RP11-340C20 on chro... 44 6.4 1
(AC005083) Homo sapiens BAC clone CTA-281G5 from 7, complete... 44 6.4 1
(AC148433) Sorex araneus clone SA_Ba-304P18, WORKING DRAFT S... 44 6.4 1
(AC132766) Rattus norvegicus clone CH230-235I13, *** SEQUENC... 44 6.4 1
(AC121177) Rattus norvegicus clone CH230-446E3, *** SEQUENCI... 44 6.4 1
(AC115369) Rattus norvegicus clone CH230-89H17, WORKING DRAF... 44 6.4 1
(AC115250) Rattus norvegicus clone CH230-67E4, WORKING DRAFT... 44 6.4 1
(AC114090) Rattus norvegicus clone CH230-33C19, *** SEQUENCI... 44 6.4 1
(AC111507) Rattus norvegicus clone CH230-132D21, WORKING DRA... 44 6.4 1
(AC107201) Rattus norvegicus clone CH230-243J22, *** SEQUENC... 44 6.4 1
(AC096527) Rattus norvegicus clone CH230-78H3, *** SEQUENCIN... 44 6.4 1
(FP104544) Wallaby DNA sequence *** SEQUENCING IN PROGRESS *... 44 6.4 1
(AC080039) Homo sapiens chromosome 11 clone RP11-398M20 map ... 44 6.4 1
(AP010290) Lotus japonicus genomic DNA, chromosome 1, clone:... 44 6.4 1
(AP010289) Lotus japonicus genomic DNA, chromosome 1, clone:... 44 6.4 1
(AP007740) Lotus japonicus genomic DNA, chromosome 1, clone:... 44 6.4 1
(AC218541) Bos taurus clone CH240-312L8, WORKING DRAFT SEQUE... 44 6.4 1
(AC213967) Lemur catta clone LB2-65F13, WORKING DRAFT SEQUEN... 44 6.4 1
(AC210370) Solanum lycopersicum chromosome 7 clone C07SLm004... 44 6.4 1
(AC207861) Lemur catta clone LB2-88B22, WORKING DRAFT SEQUEN... 44 6.4 1
(AC205235) Callicebus moloch clone LB5-233D12, WORKING DRAFT... 44 6.4 1
(AC200397) Ateles geoffroyi clone UC1-250G2, WORKING DRAFT S... 44 6.4 1
(AC184814) Canis lupus familiaris clone XX-49I11, *** SEQUEN... 44 6.4 1
(BH430846) BOHMA73TR BOHM Brassica oleracea genomic clone BO... 44 6.4 1
(AZ805707) 2M0067E14F Mouse 10kb plasmid UUGC1M library Mus ... 44 6.4 1
(AZ306426) 1M0007E01R Mouse 10kb plasmid UUGC1M library Mus ... 44 6.4 1
(FI574923) 5SE213D06 GGTC Gene Trap Library GV33C07 Mus musc... 44 6.4 1
(FH440725) CHO_OF4617xm18f1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 6.4 1
(FH208775) CHO_OF3166xe04r1.ab1 CHO_OF3 Nicotiana tabacum ge... 44 6.4 1
(ER533141) 1093015789628 Global-Ocean-Sampling_GS-35-01-01-1... 44 6.4 1
(EK442141) 1094429548464 Global-Ocean-Sampling_GS-32-01-01-1... 44 6.4 1
(EK424364) 1095516002992 Global-Ocean-Sampling_GS-31-01-01-1... 44 6.4 1
(EJ456157) 1093017482123 Global-Ocean-Sampling_GS-28-01-01-1... 44 6.4 1
(EI877046) CAH1-44J21TR CAA1Ba Cicer arietinum genomic clone... 44 6.4 1
(EF712384) Mus musculus C57BL/6N IST10021F11HMF2 gene trap e... 44 6.4 1
(DX284243) OR_ABa0185D17.f OR_ABa Oryza ridleyi genomic clon... 44 6.4 1
(DX272136) OR_ABa0168H05.r OR_ABa Oryza ridleyi genomic clon... 44 6.4 1
(DX182479) OR_ABa0045B16.r OR_ABa Oryza ridleyi genomic clon... 44 6.4 1
(AL408847) T7 end of clone AV0AA011A06 of library AV0AA from... 44 6.4 1
(DU031964) 13353 Tomato HindIII BAC Library Solanum lycopers... 44 6.4 1
(DH163473) Oryzias latipes Fosmid clone:GOLWFno438_o15, forw... 44 6.4 1
(DE581478) Bombyx mori genomic DNA, Fosmid clone:GBMFno231_e... 44 6.4 1
(DE515504) Bombyx mori genomic DNA, Fosmid clone:GBMFno132_o... 44 6.4 1
(CW943239) TcB25.1_A06_T7 Tribolium BAC library Tribolium ca... 44 6.4 1
(CW942915) TcB24.3_C12_T7 Tribolium BAC library Tribolium ca... 44 6.4 1
(CW932525) EDCCD88TR A. castellanii, 6-8 kb library from tot... 44 6.4 1
(CT537847) A BAC library has been constructed from cultivar ... 44 6.4 1
(CE831946) tigr-gss-dog-17000332208618 Dog Library Canis lup... 44 6.4 1
(CE804943) tigr-gss-dog-17000331467998 Dog Library Canis lup... 44 6.4 1
(BZ393665) EINDR40TR EI_10_12_KB Entamoeba invadens genomic ... 44 6.4 1
(BH990704) oen99a01.b1 B.oleracea002 Brassica oleracea genom... 44 6.4 1
(BH737903) BOHZT66TF BO_2_3_KB Brassica oleracea genomic clo... 44 6.4 1
(EH655453) EST06334 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH655265) EST06146 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH655260) EST06141 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH655146) EST06027 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH655143) EST06024 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH654988) EST05869 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH654891) EST05772 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH654799) EST05680 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH654668) EST05549 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH654576) EST05457 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH654551) EST05432 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH654185) EST05066 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH654049) EST04930 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH654047) EST04928 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH653873) EST04754 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH653871) EST04752 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH653844) EST04725 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH653793) EST04674 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH653681) EST04562 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH653666) EST04547 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH653622) EST04503 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH653512) EST04393 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH653028) EST03909 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH652746) EST03627 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH652556) EST03437 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH652450) EST03331 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH652327) EST03208 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH652326) EST03207 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH652279) EST03160 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH652226) EST03107 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH652183) EST03064 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH652165) EST03046 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH652009) EST02890 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH651914) EST02795 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH651713) EST02594 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH651673) EST02554 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH651616) EST02497 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH651582) EST02463 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH651514) EST02395 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH651482) EST02363 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH651463) EST02344 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH651183) EST02063 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH650837) EST01717 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH650826) EST01706 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH650717) EST01597 Paracoccidioides brasiliensis pCMV-SPORT... 44 6.4 1
(EH300063) UAHYP_09B_F_G02 UaHyphae_ARS Uromyces appendicula... 44 6.4 1
(EH299224) UAHYP_09B_R_G02 UaHyphae_ARS Uromyces appendicula... 44 6.4 1
(EH041191) transEST00507 Paracoccidioides brasiliensis trans... 44 6.4 1
(EH040888) transEST00233 Paracoccidioides brasiliensis trans... 44 6.4 1
(EH040704) transEST01066 Paracoccidioides brasiliensis trans... 44 6.4 1
(EC303170) OVARYF089558D11 POSSUM_01-POSSUM-C-OVARY-2KB Tric... 44 6.4 1
(DT052839) COT_FH_F10 Fiber and Ovule of Xu-142 Lambda Zap E... 44 6.4 1
(DN569545) 93901371 Sea Urchin primary mesenchyme cell cDNA ... 44 6.4 1
(AU000599) Bombyx mori cDNA, clone e40762. 44 6.4 1
(CN246127) EST012012 Mycelium and yeast cells from Paracocci... 44 6.4 1
(CD452344) USDA-FP_104785 Adult Alate Brown Citrus Aphid Tox... 44 6.4 1
(CD451163) USDA-FP_103226 Adult Alate Brown Citrus Aphid Tox... 44 6.4 1
(BY935020) Bombyx mori cDNA, clone:E_FL_prW-_03A02_F_0, 5' e... 44 6.4 1
(BY562757) Mus musculus activated spleen cDNA, RIKEN full-le... 44 6.4 1
(BY558715) Mus musculus activated spleen cDNA, RIKEN full-le... 44 6.4 1
(BU198935) DCBCUF06 DCB Homo sapiens cDNA, mRNA sequence. 44 6.4 1
(BM463105) AGENCOURT_6447596 NIH_MGC_72 Homo sapiens cDNA cl... 44 6.4 1
(BB985316) Bombyx mori cDNA, clone:E_ET_MSV3_03F01_F_0, 5' e... 44 6.4 1
(BB983164) Bombyx mori mRNA, EST clone:ovS3016G11r, 3' end s... 44 6.4 1
(FE860543) CAFY688.fwd CAFY Pichia stipitis oxygen limited x... 44 6.4 1
(FE860542) CAFY688.rev CAFY Pichia stipitis oxygen limited x... 44 6.4 1
(CP000487) Campylobacter fetus subsp. fetus 82-40, complete ... 44 6.4 1
(CP000312) Clostridium perfringens SM101, complete genome. 44 6.4 1
(BA000016) Clostridium perfringens str. 13 DNA, complete gen... 44 6.4 1
(AE016827) Mannheimia succiniciproducens MBEL55E, complete g... 44 6.4 1
(AC099535) Homo sapiens chromosome 3 clone RP11-2G22, comple... 42 6.6 3
(CU930021) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 6.6 5
(AC213420) Populus trichocarpa clone POP033-D24, complete se... 34 6.7 8
(AL356096) Human DNA sequence from clone RP11-366K1 on chrom... 32 6.7 5
(AC222737) Bos taurus clone CH240-43D5, WORKING DRAFT SEQUEN... 38 6.8 4
(AJ133269) Homo sapiens caveolin-1/-2 locus, Contig1, D7S522... 40 6.8 5
(AM470879) Vitis vinifera contig VV78X036104.7, whole genome... 36 6.8 5

>(BJ390201) Dictyostelium discoideum cDNA clone:dds21c17, 5' end,
single read.
Length = 636

Score = 989 bits (499), Expect(2) = 0.0
Identities = 499/499 (100%)
Strand = Plus / Plus


Query: 137 tcacatgcaccaagaacctcaataaagaaaagtcataaagaatcaattattggaaccaat 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tcacatgcaccaagaacctcaataaagaaaagtcataaagaatcaattattggaaccaat 196


Query: 197 gatgatgcagcttcatgtaaattatcagcagtcaatgttggatattattcagacccattt 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gatgatgcagcttcatgtaaattatcagcagtcaatgttggatattattcagacccattt 256


Query: 257 gtaaaatattttgttaaacatccaattagaagacaaccattaatcaatcgtggtttcttt 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gtaaaatattttgttaaacatccaattagaagacaaccattaatcaatcgtggtttcttt 316


Query: 317 tcgagagttgaatgtattgaacaattagtatcacaattctttactcaatataaagatata 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tcgagagttgaatgtattgaacaattagtatcacaattctttactcaatataaagatata 376


Query: 377 aataaaaaacaaatcattagtttaggttgtggttttgatacttattattttagattaatg 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aataaaaaacaaatcattagtttaggttgtggttttgatacttattattttagattaatg 436


Query: 437 aataataaagatattaaaaaggattttatatattttgaagttgattatgatcaagtgatt 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aataataaagatattaaaaaggattttatatattttgaagttgattatgatcaagtgatt 496


Query: 497 agtaataaaataaagataattcaaaatcataaagagttgcaatcaatgattgatcaagaa 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 agtaataaaataaagataattcaaaatcataaagagttgcaatcaatgattgatcaagaa 556


Query: 557 tgggatagtaaatatgatacgaatgaaaagttagcatcaatggtaaatcatcagagagta 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgggatagtaaatatgatacgaatgaaaagttagcatcaatggtaaatcatcagagagta 616


Query: 617 tcatcgaaatcatatagat 635
|||||||||||||||||||
Sbjct: 617 tcatcgaaatcatatagat 635

Score = 159 bits (80), Expect(2) = 0.0
Identities = 80/80 (100%)
Strand = Plus / Plus


Query: 1 atttgtctaaaatatatttattttataaaataatccaaatatgtcattttcaataccacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttgtctaaaatatatttattttataaaataatccaaatatgtcattttcaataccacc 60


Query: 61 attaagtagtattggtagcc 80
||||||||||||||||||||
Sbjct: 61 attaagtagtattggtagcc 80

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 930,779,752
Number of extensions: 65092213
Number of successful extensions: 6287665
Number of sequences better than 10.0: 553
Length of query: 635
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 611
Effective length of database: 99,340,224,878
Effective search space: 60696877400458
Effective search space used: 60696877400458
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.29
Homology vs Protein
Query= Contig-U03706-1 (Contig-U03706-1Q) /CSM_Contig/Contig-U03706-1Q.Seq.d
(635 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AY074300_1(AY074300|pid:none) Arabidopsis thaliana unknown prote... 111 2e-23
EU960033_1(EU960033|pid:none) Zea mays clone 221266 leucine carb... 105 8e-22
AE014134_2722(AE014134|pid:none) Drosophila melanogaster chromos... 105 8e-22
AK063371_1(AK063371|pid:none) Oryza sativa Japonica Group cDNA c... 102 1e-20
BX511265_17(BX511265|pid:none) Zebrafish DNA sequence from clone... 90 5e-17
AL772198_3(AL772198|pid:none) Zebrafish DNA sequence from clone ... 90 5e-17
BC157150_1(BC157150|pid:none) Xenopus tropicalis leucine carboxy... 86 9e-16
AM270171_8(AM270171|pid:none) Aspergillus niger contig An08c0160... 86 1e-15
AF037601_1(AF037601|pid:none) Homo sapiens leucine carboxyl meth... 85 2e-15
AL137283_1(AL137283|pid:none) Homo sapiens mRNA; cDNA DKFZp434C0... 85 2e-15
AF151826_1(AF151826|pid:none) Homo sapiens CGI-68 protein mRNA, ... 85 2e-15
(Q9UIC8) RecName: Full=Leucine carboxyl methyltransferase 1; ... 85 2e-15
BX649607_25(BX649607|pid:none) Aspergillus fumigatus BAC pilot p... 85 2e-15
(Q4WS57) RecName: Full=Leucine carboxyl methyltransferase 1; ... 85 2e-15
AM920431_1240(AM920431|pid:none) Penicillium chrysogenum Wiscons... 85 2e-15
(Q2U6D4) RecName: Full=Leucine carboxyl methyltransferase 2; ... 83 8e-15
(Q7SAP7) RecName: Full=Leucine carboxyl methyltransferase 1; ... 82 1e-14
(Q6P4Z6) RecName: Full=Leucine carboxyl methyltransferase 1; ... 81 3e-14
CU638744_492(CU638744|pid:none) Podospora anserina genomic DNA c... 81 3e-14
CR382136_636(CR382136|pid:none) Debaryomyces hansenii strain CBS... 79 8e-14
(P46554) RecName: Full=Probable leucine carboxyl methyltransfera... 79 1e-13
AM502254_259(AM502254|pid:none) Leishmania infantum chromosome 36. 79 1e-13
CP001324_819(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 78 2e-13
(Q3T0H0) RecName: Full=Leucine carboxyl methyltransferase 1; ... 78 2e-13
AY170464_5(AY170464|pid:none) Takifugu rubripes C16orf8-like pro... 78 2e-13
AY808679_1(AY808679|pid:none) Schistosoma japonicum SJCHGC02226 ... 77 3e-13
CT005272_9(CT005272|pid:none) Leishmania major strain Friedlin, ... 77 4e-13
(Q60YU0) RecName: Full=Probable leucine carboxyl methyltransfera... 77 5e-13
AM270401_49(AM270401|pid:none) Aspergillus niger contig An18c008... 76 9e-13
FN357298_22(FN357298|pid:none) Schistosoma mansoni genome sequen... 76 9e-13
BC078431_1(BC078431|pid:none) Danio rerio zgc:101094, mRNA (cDNA... 75 1e-12
(O60157) RecName: Full=Leucine carboxyl methyltransferase 2; ... 72 1e-11
(Q6C997) RecName: Full=Leucine carboxyl methyltransferase 1; ... 71 2e-11
BC014217_1(BC014217|pid:none) Homo sapiens leucine carboxyl meth... 71 2e-11
(O94257) RecName: Full=Leucine carboxyl methyltransferase 1; ... 71 3e-11
AK025884_1(AK025884|pid:none) Homo sapiens cDNA: FLJ22231 fis, c... 71 3e-11
AB011119_1(AB011119|pid:none) Homo sapiens mRNA for KIAA0547 pro... 69 9e-11
AK292587_1(AK292587|pid:none) Homo sapiens cDNA FLJ76457 complet... 69 9e-11
AB383903_1(AB383903|pid:none) Synthetic construct DNA, clone: pF... 69 9e-11
AK223364_1(AK223364|pid:none) Homo sapiens mRNA for leucine carb... 68 2e-10
AM502253_301(AM502253|pid:none) Leishmania infantum chromosome 35. 67 3e-10
CP000081_290(CP000081|pid:none) Leishmania major chromosome 35, ... 67 3e-10
AL845479_3(AL845479|pid:none) Mouse DNA sequence from clone RP23... 67 4e-10
(Q4P4G2) RecName: Full=Leucine carboxyl methyltransferase 1; ... 67 4e-10
(Q6BQD2) RecName: Full=Leucine carboxyl methyltransferase 1; ... 65 1e-09
FM992688_105(FM992688|pid:none) Candida dubliniensis CD36 chromo... 65 1e-09
(Q75AW4) RecName: Full=Leucine carboxyl methyltransferase 2; ... 63 6e-09
CT009752_5(CT009752|pid:none) Trypanosoma brucei chromosome 10, ... 60 4e-08
(Q5KLL9) RecName: Full=Leucine carboxyl methyltransferase 1; ... 60 5e-08
CU928170_819(CU928170|pid:none) Kluyveromyces thermotolerans str... 60 5e-08
(Q5A387) RecName: Full=Leucine carboxyl methyltransferase 1; ... 55 2e-06
(Q6FXA5) RecName: Full=Leucine carboxyl methyltransferase 2; ... 55 2e-06
FN392320_1082(FN392320|pid:none) Pichia pastoris GS115 chromosom... 52 2e-05
CP000597_157(CP000597|pid:none) Ostreococcus lucimarinus CCE9901... 49 1e-04
CU638744_146(CU638744|pid:none) Podospora anserina genomic DNA c... 48 3e-04
CR940353_107(CR940353|pid:none) Theileria annulata strain Ankara... 47 4e-04
CR940353_106(CR940353|pid:none) Theileria annulata strain Ankara... 47 5e-04
CU458896_2187(CU458896|pid:none) Mycobacterium abscessus chromos... 45 0.002
CR940353_108(CR940353|pid:none) Theileria annulata strain Ankara... 44 0.005
(Q6CWW0) RecName: Full=Leucine carboxyl methyltransferase 1; ... 42 0.015
(Q4IER0) RecName: Full=Leucine carboxyl methyltransferase 2; ... 41 0.033
AE009951_971(AE009951|pid:none) Fusobacterium nucleatum subsp. n... 40 0.043
(Q6FUI5) RecName: Full=Leucine carboxyl methyltransferase 1; ... 39 0.13
CP001142_536(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1... 37 0.48
(Q759U5) RecName: Full=Leucine carboxyl methyltransferase 1; ... 37 0.63
AP008934_1235(AP008934|pid:none) Staphylococcus saprophyticus su... 37 0.63
AP009049_62(AP009049|pid:none) Clostridium kluyveri NBRC 12016 D... 36 1.1
CR382135_168(CR382135|pid:none) Debaryomyces hansenii strain CBS... 35 2.4
CP001614_565(CP001614|pid:none) Teredinibacter turnerae T7901, c... 35 2.4
CU928176_556(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 35 2.4
CP000480_6263(CP000480|pid:none) Mycobacterium smegmatis str. MC... 34 3.1
(Q8R5Z2) RecName: Full=Trigger factor; Short=TF; &AE00... 34 3.1
AP008971_1370(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA... 34 4.1
AE014187_374(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 34 4.1
CP000937_1322(CP000937|pid:none) Francisella philomiragia subsp.... 34 4.1
AE010299_2687(AE010299|pid:none) Methanosarcina acetivorans str.... 33 5.3
CR382135_169(CR382135|pid:none) Debaryomyces hansenii strain CBS... 33 5.3
CP000099_3181(CP000099|pid:none) Methanosarcina barkeri str. Fus... 33 5.3
CP000387_1494(CP000387|pid:none) Streptococcus sanguinis SK36, c... 33 6.9
AE009948_1460(AE009948|pid:none) Streptococcus agalactiae 2603V/... 33 6.9
AY458637_20(AY458637|pid:none) Uncultured marine bacterium 440 c... 33 6.9
AK172552_1(AK172552|pid:none) Mus musculus activated spleen cDNA... 33 9.1
CP000539_2025(CP000539|pid:none) Acidovorax sp. JS42, complete g... 33 9.1
AP008208_2939(AP008208|pid:none) Oryza sativa (japonica cultivar... 33 9.1
CP000724_1159(CP000724|pid:none) Alkaliphilus metalliredigens QY... 33 9.1
AP004028_4(AP004028|pid:none) Oryza sativa Japonica Group genomi... 33 9.1
CU928181_328(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 33 9.1

>AY074300_1(AY074300|pid:none) Arabidopsis thaliana unknown protein
(At1g02100) mRNA, complete cds.
&AY133744_1(AY133744|pid:none)
Length = 332

Score = 111 bits (277), Expect = 2e-23
Identities = 58/143 (40%), Positives = 87/143 (60%)
Frame = +2

Query: 164 KSHKESIIGTNDDAASCKLSAVNVGYYSDPFVKYFVKHPIRRQPLINRGFFSRVECIEQL 343
+S++ ++ TNDDA++ KLS V GY D +V FVK P+RR P+INRG+FSR +L
Sbjct: 5 RSNRAAVQATNDDASASKLSCVKKGYMKDDYVHLFVKRPVRRSPIINRGYFSRWAAFRKL 64

Query: 344 VSQFFTQYKDINKKQIISLGCGFDTYYFRLMNNKDIKKDFIYFEVDYDQVISNKIKIIQN 523
+SQF +KKQI+SLG GFDT YF+L++ + +Y E+D+ +V S K +IQN
Sbjct: 65 MSQFLLSGTS-SKKQILSLGAGFDTTYFQLLDEGNGPN--LYVELDFKEVTSKKAAVIQN 121

Query: 524 HKELQSMIDQEWDSKYDTNEKLA 592
+L+ + D + L+
Sbjct: 122 SSQLRDKLGANASISIDEGQVLS 144

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 828,624,496
Number of extensions: 14542304
Number of successful extensions: 38329
Number of sequences better than 10.0: 87
Number of HSP's gapped: 38216
Number of HSP's successfully gapped: 87
Length of query: 211
Length of database: 1,061,185,681
Length adjustment: 123
Effective length of query: 88
Effective length of database: 659,166,577
Effective search space: 58006658776
Effective search space used: 58006658776
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.90 gvh: 0.38 alm: 0.51 top: 0.57 tms: 0.00 mit: 0.38 mip: 0.08
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

32.0 %: mitochondrial
28.0 %: nuclear
20.0 %: cytoplasmic
16.0 %: cytoskeletal
4.0 %: peroxisomal

>> prediction for Contig-U03706-1 is mit

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 2
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0