Contig-U03670-1
Contig ID Contig-U03670-1
Contig update 2001. 8.29
Contig sequence
>Contig-U03670-1 (Contig-U03670-1Q) /CSM_Contig/Contig-U03670-1Q.Seq.d
AACCACCACTACAGNCCGGCTCCTGCTGATCTATTAAATTTCAATGGTCC
AAATGGTCTTCCTGTACCAATTCCTGGTATACCAGGTTCTTATATTTCAG
TGATNNCAGGTGGTGGAAATTTATNTCAACTCTTATCAAATCAAAATACT
ACAACTAGAAGACAAACTTCAAGAAGATCNAGAGATCCAAATTCAAGTGG
TTCATCATCATCATCATCATCATCATCACCAACAACNACTACTACTACCA
NTACTACTAGATCATCATCATCNCCAACACGAACAAGAACAAGAACAAGA
ACATCATCAACT

Gap no gap
Contig length 312
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 1408184
End point 1407872
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U03670
List of clone(s)

est1=SFJ325Z,1,313
Translated Amino Acid sequence
NHHYXPAPADLLNFNGPNGLPVPIPGIPGSYISVXXGGGNLXQLLSNQNTTTRRQTSRRS
RDPNSSGSSSSSSSSSPTTTTTTXTTRSSSSPTRTRTRTRTSST


Translated Amino Acid sequence (All Frames)
Frame A:
NHHYXPAPADLLNFNGPNGLPVPIPGIPGSYISVXXGGGNLXQLLSNQNTTTRRQTSRRS
RDPNSSGSSSSSSSSSPTTTTTTXTTRSSSSPTRTRTRTRTSST


Frame B:
ttttxrllliy*ismvqmvflyqflvyqvlifq*xqvveiyxnsyqikilqledklqedx
eiqiqvvhhhhhhhhhqqxlllpxlldhhhxqheqeqeqehhq


Frame C:
pplqxgsc*sikfqwskwssctnswytrflyfsdxrwwkfxstlikskyyn*ktnfkkix
rskfkwfiiiiiiiitnnxyyyxyy*iiiixntnknknkniin


own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U03670-1 (Contig-U03670-1Q)
/CSM_Contig/Contig-U03670-1Q.Seq.d
(312 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U03670-1 (Contig-U03670-1Q) /CSM_Contig/Conti... 369 e-102
Contig-U09194-1 (Contig-U09194-1Q) /CSM_Contig/Conti... 54 9e-08
Contig-U14276-1 (Contig-U14276-1Q) /CSM_Contig/Conti... 52 4e-07
Contig-U12746-1 (Contig-U12746-1Q) /CSM_Contig/Conti... 48 6e-06
Contig-U09810-1 (Contig-U09810-1Q) /CSM_Contig/Conti... 48 6e-06
Contig-U12507-1 (Contig-U12507-1Q) /CSM_Contig/Conti... 44 9e-05
Contig-U12282-1 (Contig-U12282-1Q) /CSM_Contig/Conti... 44 9e-05
Contig-U11822-1 (Contig-U11822-1Q) /CSM_Contig/Conti... 44 9e-05
Contig-U11247-1 (Contig-U11247-1Q) /CSM_Contig/Conti... 44 9e-05
Contig-U03062-1 (Contig-U03062-1Q) /CSM_Contig/Conti... 44 9e-05

>Contig-U03670-1 (Contig-U03670-1Q) /CSM_Contig/Contig-U03670-1Q.Seq.d
Length = 312

Score = 369 bits (186), Expect = e-102
Identities = 201/201 (100%)
Strand = Plus / Plus


Query: 1 aaccaccactacagnccggctcctgctgatctattaaatttcaatggtccaaatggtctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaccaccactacagnccggctcctgctgatctattaaatttcaatggtccaaatggtctt 60


Query: 61 cctgtaccaattcctggtataccaggttcttatatttcagtgatnncaggtggtggaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctgtaccaattcctggtataccaggttcttatatttcagtgatnncaggtggtggaaat 120


Query: 121 ttatntcaactcttatcaaatcaaaatactacaactagaagacaaacttcaagaagatcn 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttatntcaactcttatcaaatcaaaatactacaactagaagacaaacttcaagaagatcn 180


Query: 181 agagatccaaattcaagtggt 201
|||||||||||||||||||||
Sbjct: 181 agagatccaaattcaagtggt 201


Score = 149 bits (75), Expect = 2e-36
Identities = 84/84 (100%)
Strand = Plus / Plus


Query: 229 ccaacaacnactactactaccantactactagatcatcatcatcnccaacacgaacaaga 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ccaacaacnactactactaccantactactagatcatcatcatcnccaacacgaacaaga 288


Query: 289 acaagaacaagaacatcatcaact 312
||||||||||||||||||||||||
Sbjct: 289 acaagaacaagaacatcatcaact 312


Score = 32.2 bits (16), Expect = 0.33
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 261 atcatcatcatcnccaaca 279
|||||||||||| ||||||
Sbjct: 216 atcatcatcatcaccaaca 234


Score = 28.2 bits (14), Expect = 5.2
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 73 cctggtataccagg 86
||||||||||||||
Sbjct: 86 cctggtataccagg 73


>Contig-U09194-1 (Contig-U09194-1Q) /CSM_Contig/Contig-U09194-1Q.Seq.d
Length = 710

Score = 54.0 bits (27), Expect = 9e-08
Identities = 30/31 (96%)
Strand = Plus / Plus


Query: 276 aacacgaacaagaacaagaacaagaacatca 306
|||| ||||||||||||||||||||||||||
Sbjct: 446 aacaagaacaagaacaagaacaagaacatca 476


Score = 42.1 bits (21), Expect = 3e-04
Identities = 27/29 (93%)
Strand = Plus / Plus


Query: 275 caacacgaacaagaacaagaacaagaaca 303
||||| ||||||||||| |||||||||||
Sbjct: 475 caacaagaacaagaacatgaacaagaaca 503


Score = 34.2 bits (17), Expect = 0.084
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 288 aacaagaacaagaacat 304
|||||||||||||||||
Sbjct: 476 aacaagaacaagaacat 492


Score = 32.2 bits (16), Expect = 0.33
Identities = 22/24 (91%)
Strand = Plus / Plus


Query: 276 aacacgaacaagaacaagaacaag 299
|||| ||||| |||||||||||||
Sbjct: 482 aacaagaacatgaacaagaacaag 505


Score = 32.2 bits (16), Expect = 0.33
Identities = 25/28 (89%)
Strand = Plus / Plus


Query: 276 aacacgaacaagaacaagaacaagaaca 303
|||| ||||||||||| ||||||||||
Sbjct: 458 aacaagaacaagaacatcaacaagaaca 485


>Contig-U14276-1 (Contig-U14276-1Q) /CSM_Contig/Contig-U14276-1Q.Seq.d
Length = 1064

Score = 52.0 bits (26), Expect = 4e-07
Identities = 32/34 (94%)
Strand = Plus / Plus


Query: 276 aacacgaacaagaacaagaacaagaacatcatca 309
|||| ||||||||||||||||||||||| |||||
Sbjct: 685 aacaagaacaagaacaagaacaagaacaacatca 718


Score = 50.1 bits (25), Expect = 1e-06
Identities = 28/29 (96%)
Strand = Plus / Plus


Query: 275 caacacgaacaagaacaagaacaagaaca 303
||||| |||||||||||||||||||||||
Sbjct: 678 caacaagaacaagaacaagaacaagaaca 706


Score = 42.1 bits (21), Expect = 3e-04
Identities = 27/29 (93%)
Strand = Plus / Plus


Query: 275 caacacgaacaagaacaagaacaagaaca 303
||||| |||||| ||||||||||||||||
Sbjct: 666 caacaagaacaacaacaagaacaagaaca 694


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5301
Number of Sequences: 6905
Number of extensions: 5301
Number of successful extensions: 764
Number of sequences better than 10.0: 214
length of query: 312
length of database: 5,674,871
effective HSP length: 15
effective length of query: 297
effective length of database: 5,571,296
effective search space: 1654674912
effective search space used: 1654674912
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 6. 5
Homology vs DNA
Query= Contig-U03670-1 (Contig-U03670-1Q) /CSM_Contig/Contig-U03670-1Q.Seq.d
(312 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ401739) Dictyostelium discoideum cDNA clone:dds19b07, 3' ... 369 e-114 2
(AC144849) Mus musculus BAC clone RP24-482B19 from chromosom... 56 8e-04 1
(AP009283) Solanum lycopersicum genomic DNA, chromosome 8, c... 56 8e-04 1
(DN625541) UCRCA01_06J12_r Bark of Madame Vinous Sweet Orang... 56 8e-04 1
(BE095270) 00331 leafy spurge Lambda HybriZAP 2.1 two-hybrid... 56 8e-04 1
(AC141839) Apis mellifera clone CH224-63A17, WORKING DRAFT S... 54 0.003 1
(AU052934) Dictyostelium discoideum slug cDNA, clone SLF347. 54 0.003 1
(BJ419576) Dictyostelium discoideum cDNA clone:ddv36d16, 5' ... 44 0.012 2
(AC120314) Rattus norvegicus clone CH230-402E14, *** SEQUENC... 52 0.012 1
(AC181221) Strongylocentrotus purpuratus clone R3-4009C07, W... 52 0.012 1
(AC179981) Strongylocentrotus purpuratus clone R3-18H5, WORK... 52 0.012 1
(DH464509) Monosiga ovata DNA, fosmid clone: MOF-005D10, gen... 52 0.012 1
(CF835681) UCRCS03_01L04_r Washington Navel Orange Shoot Mer... 52 0.012 1
(BJ376618) Dictyostelium discoideum cDNA clone:ddc29d08, 3' ... 52 0.012 1
(FD490359) Ltu01b_58_G03_C012.b2 Liriodendron Flower Bud Lib... 52 0.012 1
(FD479927) 183G6M13r1 Ps-n cDNA Library Pseudo-nitzschia mul... 52 0.012 1
(FD479751) 177H11M13r1 Ps-n cDNA Library Pseudo-nitzschia mu... 52 0.012 1
(FD478867) 163B8T71 Ps-n cDNA Library Pseudo-nitzschia multi... 52 0.012 1
(EY801631) CR05-C3-701-104-G05-CT.F Mandarin fruit, developm... 52 0.012 1
(CU695230) Mouse DNA sequence from clone CH26-455J9. 50 0.049 1
(CT030182) Mouse DNA sequence from clone RP23-21N15 on chrom... 50 0.049 1
(AL844863) Mouse DNA sequence from clone RP23-273C23 on chro... 50 0.049 1
(AL669853) Mouse DNA sequence from clone RP23-204F22 on chro... 50 0.049 1
(AL645849) Mouse DNA sequence from clone RP23-14F5 on chromo... 50 0.049 1
(AL590633) Mouse DNA sequence from clone RP23-211O23 on chro... 50 0.049 1
(AC194981) Mus musculus BAC clone CH36-229E5 from chromosome... 50 0.049 1
(AC184107) Mus musculus chromosome UNK clone CH33-213P12, co... 50 0.049 1
(AC153799) Mus musculus BAC RP23-145M15 (Roswell Park Cance... 50 0.049 1
(AC147260) Mus musculus BAC clone RP24-186L11 from chromosom... 50 0.049 1
(AC147222) Mus musculus BAC clone RP23-69L20 from chromosome... 50 0.049 1
(AC137742) Mus musculus BAC clone RP24-345F6 from chromosome... 50 0.049 1
(AC131694) Mus musculus BAC clone RP23-393L24 from chromosom... 50 0.049 1
(AC130529) Mus musculus BAC clone RP23-124O11 from chromosom... 50 0.049 1
(AC124185) Mus musculus BAC clone RP23-230F5 from 1, complet... 50 0.049 1
(AC122868) Mus musculus BAC clone RP23-148H17 from 6, comple... 50 0.049 1
(AC122476) Mus musculus BAC clone RP24-334L2 from chromosome... 50 0.049 1
(AC106505) Rattus norvegicus 1 BAC CH230-206C20 (Children's ... 50 0.049 1
(AC105631) Rattus norvegicus 1 BAC CH230-132J4 (Children's H... 50 0.049 1
(AC102461) Mus musculus chromosome 8, clone RP24-319H6, comp... 50 0.049 1
(AC087801) Mus musculus strain C57BL/6J clone rp23-396i23 ma... 50 0.049 1
(FM992691) Candida dubliniensis CD36 chromosome 4, complete ... 50 0.049 1
(AP008217) Oryza sativa (japonica cultivar-group) genomic DN... 50 0.049 1
(AE017344) Cryptococcus neoformans var. neoformans JEC21 chr... 50 0.049 1
(AC149371) Phakopsora pachyrhizi clone JGIAFNA-53G19, comple... 50 0.049 1
(AC135569) Oryza sativa Japonica Group chromosome 11 clone O... 50 0.049 1
(AB206826) Pichia jadinii CuYAP1 gene for AP-1-like transcri... 50 0.049 1
(EA697127) Sequence 76006 from patent US 7365185. 50 0.049 1
(EA138564) Sequence 2879 from patent US 7214786. 50 0.049 1
(DD320973) gene encoding transcription factor from Candida u... 50 0.049 1
(X96869) D.discoideum dokA gene. 50 0.049 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 50 0.049 1
(AL035423) Human DNA sequence from clone RP1-20I3 on chromos... 50 0.049 1
(AC132549) Rattus norvegicus clone CH230-246M17, WORKING DRA... 50 0.049 1
(AC131884) Rattus norvegicus clone CH230-2J17, *** SEQUENCIN... 50 0.049 1
(AC131874) Rattus norvegicus clone CH230-463B5, *** SEQUENCI... 50 0.049 1
(AC131618) Rattus norvegicus clone CH230-336D15, *** SEQUENC... 50 0.049 1
(AC131527) Rattus norvegicus clone CH230-420C21, *** SEQUENC... 50 0.049 1
(AC130952) Rattus norvegicus clone CH230-38O6, *** SEQUENCIN... 50 0.049 1
(AC130745) Rattus norvegicus clone CH230-36B4, *** SEQUENCIN... 50 0.049 1
(AC130571) Rattus norvegicus clone CH230-171G19, *** SEQUENC... 50 0.049 1
(AC129861) Rattus norvegicus clone CH230-169I22, WORKING DRA... 50 0.049 1
(AC128345) Rattus norvegicus clone CH230-103N20, *** SEQUENC... 50 0.049 1
(AC128230) Rattus norvegicus clone CH230-57K8, *** SEQUENCIN... 50 0.049 1
(AC127101) Rattus norvegicus clone CH230-266H6, *** SEQUENCI... 50 0.049 1
(AC126139) Rattus norvegicus clone CH230-104O14, WORKING DRA... 50 0.049 1
(AC125771) Rattus norvegicus clone CH230-8F3, *** SEQUENCING... 50 0.049 1
(AC125658) Rattus norvegicus clone CH230-10N22, WORKING DRAF... 50 0.049 1
(AC123466) Rattus norvegicus clone CH230-18J2, WORKING DRAFT... 50 0.049 1
(AC122674) Rattus norvegicus clone CH230-31B20, *** SEQUENCI... 50 0.049 1
(AC120078) Rattus norvegicus clone CH230-440P7, *** SEQUENCI... 50 0.049 1
(AC119299) Rattus norvegicus clone CH230-312O10, WORKING DRA... 50 0.049 1
(AC118233) Mus musculus clone RP23-462L17, WORKING DRAFT SEQ... 50 0.049 1
(AC118129) Rattus norvegicus clone CH230-254K8, WORKING DRAF... 50 0.049 1
(AC114449) Rattus norvegicus clone CH230-92D11, *** SEQUENCI... 50 0.049 1
(AC114145) Rattus norvegicus clone CH230-142M1, WORKING DRAF... 50 0.049 1
(AC112833) Rattus norvegicus clone CH230-335B4, WORKING DRAF... 50 0.049 1
(AC112565) Rattus norvegicus clone CH230-167G3, *** SEQUENCI... 50 0.049 1
(AC112090) Rattus norvegicus clone CH230-149L24, WORKING DRA... 50 0.049 1
(AC111924) Rattus norvegicus clone CH230-44M12, *** SEQUENCI... 50 0.049 1
(AC110640) Rattus norvegicus clone CH230-69K9, *** SEQUENCIN... 50 0.049 1
(AC110473) Rattus norvegicus clone CH230-24C23, *** SEQUENCI... 50 0.049 1
(AC107800) Mus musculus chromosome 3 clone RP23-28K16 map 3,... 50 0.049 1
(AC107475) Rattus norvegicus clone CH230-221E18, *** SEQUENC... 50 0.049 1
(AC106657) Rattus norvegicus clone CH230-71P24, *** SEQUENCI... 50 0.049 1
(AC103461) Rattus norvegicus clone CH230-47G11, WORKING DRAF... 50 0.049 1
(AC099165) Rattus norvegicus clone CH230-50N21, WORKING DRAF... 50 0.049 1
(AC098212) Rattus norvegicus clone CH230-14L9, *** SEQUENCIN... 50 0.049 1
(AC098180) Rattus norvegicus clone CH230-116A3, WORKING DRAF... 50 0.049 1
(AC097767) Rattus norvegicus clone CH230-11A23, *** SEQUENCI... 50 0.049 1
(AC097363) Rattus norvegicus clone CH230-6K20, *** SEQUENCIN... 50 0.049 1
(AC095620) Rattus norvegicus clone CH230-8G8, *** SEQUENCING... 50 0.049 1
(AC095565) Rattus norvegicus clone CH230-7O14, *** SEQUENCIN... 50 0.049 1
(AC095273) Rattus norvegicus clone CH230-11J14, WORKING DRAF... 50 0.049 1
(AC094686) Rattus norvegicus clone CH230-5E13, *** SEQUENCIN... 50 0.049 1
(CU695228) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***... 50 0.049 1
(CU695224) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***... 50 0.049 1
(AC091343) Rattus norvegicus clone CH230-1C22, *** SEQUENCIN... 50 0.049 1
(AP009953) Lotus japonicus genomic DNA, chromosome 6, clone:... 50 0.049 1
(AC233016) Monodelphis domestica clone VMRC18-318M17, WORKIN... 50 0.049 1
(AC232029) Solanum tuberosum chromosome 1 clone RH053G20, **... 50 0.049 1
(AC231477) Monodelphis domestica clone VMRC18-889P7, WORKING... 50 0.049 1
(AC229629) Monodelphis domestica clone VMRC18-180L13, WORKIN... 50 0.049 1
(AC201249) Strongylocentrotus purpuratus clone R3-15N12, WOR... 50 0.049 1
(AC184538) Strongylocentrotus purpuratus clone R3-3110J18, W... 50 0.049 1
(AC180807) Strongylocentrotus purpuratus clone R3-3071I16, W... 50 0.049 1
(AC179033) Strongylocentrotus purpuratus clone R3-1108E04, W... 50 0.049 1
(AC178394) Strongylocentrotus purpuratus clone R3-3110J21, W... 50 0.049 1
(AC178073) Strongylocentrotus purpuratus clone R3-3059I07, W... 50 0.049 1
(ET089327) QM0AAA13DD03FM1 CCL1 Citrus clementina genomic cl... 50 0.049 1
(EJ633169) 1092966607048 Global-Ocean-Sampling_GS-29-01-01-1... 50 0.049 1
(EJ612388) 1092962056638 Global-Ocean-Sampling_GS-29-01-01-1... 50 0.049 1
(EI844362) POTH210TR Solanum tuberosum RHPOTKEY BAC ends Sol... 50 0.049 1
(ED710633) GM_WBb0057J12.r GM_WBb Glycine max genomic clone ... 50 0.049 1
(ED691635) GM_WBb0029C22.f GM_WBb Glycine max genomic clone ... 50 0.049 1
(ED421626) AUAC-aai60h11.g1 Ascaris suum whole genome shotgu... 50 0.049 1
(ED306540) AUAC-aao44e11.b1 Ascaris suum whole genome shotgu... 50 0.049 1
(DX985903) CHORI103-4A22.TJ.1 CHORI103 Schistosoma mansoni g... 50 0.049 1
(DH821385) Rattus norvegicus DNA, BAC clone: RNB1-425F17, 3'... 50 0.049 1
(DH806960) Rattus norvegicus DNA, BAC clone: RNB1-404K15, 3'... 50 0.049 1
(DH557163) Rattus norvegicus DNA, BAC clone: RNB1-067M10, 3'... 50 0.049 1
(DH490632) Monosiga ovata DNA, fosmid clone: MOF-050M07, gen... 50 0.049 1
(DH442283) Macropus eugenii DNA with T7 primer, fosmid clone... 50 0.049 1
(CR000596) Forward strand read from insert in 3'HPRT inserti... 50 0.049 1
(BZ281686) CH230-335M14.TV CHORI-230 Segment 2 Rattus norveg... 50 0.049 1
(EB235859) PEG003-C-210948-501 Normalized Pedal-Pleural Gang... 50 0.049 1
(DY306571) KN0AAL2CD06FM1 KCl-Salt1 Citrus reshni cDNA 5', m... 50 0.049 1
(DY303587) KN0AAQ6YD17RM1 CitNFL Citrus clementina cDNA 5', ... 50 0.049 1
(DY285549) IC0AAA63DA10RM1 CitNFL Citrus clementina cDNA 5',... 50 0.049 1
(DY283831) IC0AAA5CF07RM1 CitNFL Citrus clementina cDNA 5', ... 50 0.049 1
(DY281704) IC0AAA54CG07RM1 CitNFL Citrus clementina cDNA 5',... 50 0.049 1
(DY275607) IC0AAA39DD11RM1 CitNFL Citrus clementina cDNA 5',... 50 0.049 1
(DY258698) KN0AAI3AD06FM1 AbsDev1 Citrus clementina cDNA 5',... 50 0.049 1
(DB949691) Manihot esculenta mRNA, clone: CAS01_034_O14, 3'end. 50 0.049 1
(DB946900) Manihot esculenta mRNA, clone: CAS01_026_E19, 3'end. 50 0.049 1
(CK483305) AGENCOURT_17636624 NIH_MGC_235 Rattus norvegicus ... 50 0.049 1
(CK328535) 20-F-032513-501 Aplysia californica MCC cell type... 50 0.049 1
(CJ068579) Mus musculus cDNA, RIKEN full-length enriched lib... 50 0.049 1
(CD086349) MC1-0023P-A063-A09-U.B MC1-0023 Schistosoma manso... 50 0.049 1
(BQ494154) EST03320 Pb0001 Paracoccidioides brasiliensis cDN... 50 0.049 1
(BM656118) 17000687387385 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.049 1
(GE495952) CCFS7259.g1_F16.ab1 CCF(STU) sunflower Helianthus... 50 0.049 1
(FG548002) rmhcyc0_000155.y1.scf (Gossypium arboreum L.) Dro... 50 0.049 1
(FC919240) KN0AAL2CD06FM1 KCl_Salt1 Citrus reshni cDNA clone... 50 0.049 1
(FC910133) IC0AAA63DA10RM1 IVIA1 Citrus clementina cDNA clon... 50 0.049 1
(FC908685) IC0AAA54CG07RM1 IVIA1 Citrus clementina cDNA clon... 50 0.049 1
(FC906843) IC0AAA39DD11RM1 IVIA1 Citrus clementina cDNA clon... 50 0.049 1
(FC896170) KN0AAQ6YD17RM1 IVIA1 Citrus clementina cDNA clone... 50 0.049 1
(FC888616) IC0AAA5CF07RM1 IVIA1 Citrus clementina cDNA clone... 50 0.049 1
(FC873367) KN0AAI3AD06FM1 AbsDev Citrus clementina cDNA clon... 50 0.049 1
(EY105393) CAZI4220.fwd CAZI Artemisia annua normalized leaf... 50 0.049 1
(AC096197) Rattus norvegicus clone CH230-59A9, *** SEQUENCIN... 46 0.055 2
(AC116997) Mus musculus BAC clone RP23-8J15 from chromosome ... 44 0.081 3
(CP001150) Rhodobacter sphaeroides KD131 chromosome 1, compl... 34 0.099 2
(AC139899) Rattus norvegicus clone CH230-527O6, WORKING DRAF... 38 0.12 2
(AC180084) Strongylocentrotus purpuratus clone R3-4008I24, W... 48 0.12 3
(BZ034428) oee45f12.b1 B.oleracea002 Brassica oleracea genom... 34 0.15 2
(BZ180741) CH230-523B12.TV CHORI-230 Segment 2 Rattus norveg... 38 0.15 2
(AC170256) Mus musculus chromosome 7 clone wi1-1212D11 map 7... 48 0.15 2
(AC118410) Rattus norvegicus clone CH230-218N15, *** SEQUENC... 48 0.16 3
(BV626368) S217P60615RE7.T0 Noemie Pan troglodytes troglodyt... 48 0.19 1
(CT486003) Mouse DNA sequence from clone RP23-415F11 on chro... 48 0.19 1
(CT030172) Mouse DNA sequence from clone RP23-313L22 on chro... 48 0.19 1
(CR478164) Mouse DNA sequence from clone WI1-1783E2 on chrom... 48 0.19 1
(BX664611) Mouse DNA sequence from clone RP24-201C13 on chro... 48 0.19 1
(BX649287) Mouse DNA sequence from clone RP23-267A6 on chrom... 48 0.19 1
(BX548065) Mouse DNA sequence from clone RP23-163B21 on chro... 48 0.19 1
(BX088552) Mus musculus chromosome 11 region in the Om locus... 48 0.19 1
(BX005086) Mouse DNA sequence from clone RP23-149N22 on chro... 48 0.19 1
(BX001049) Mouse DNA sequence from clone RP23-145C23 on chro... 48 0.19 1
(BC117865) Mus musculus RIKEN cDNA 4932411N23 gene, mRNA (cD... 48 0.19 1
(BC117864) Mus musculus RIKEN cDNA 4932411N23 gene, mRNA (cD... 48 0.19 1
(AL954131) Mouse DNA sequence from clone RP23-32H12 on chrom... 48 0.19 1
(AL935147) Mouse DNA sequence from clone RP23-33O19 on chrom... 48 0.19 1
(AL929443) Mouse DNA sequence from clone RP23-467A7 on chrom... 48 0.19 1
(AL928738) Mouse DNA sequence from clone RP23-76M15 on chrom... 48 0.19 1
(AL928706) Mouse DNA sequence from clone RP23-54E16 on chrom... 48 0.19 1
(AL844881) Mouse DNA sequence from clone RP23-244B19 on chro... 48 0.19 1
(AL844566) Mouse DNA sequence from clone RP23-173H17 on chro... 48 0.19 1
(AL844214) Mouse DNA sequence from clone RP23-414C20 on chro... 48 0.19 1
(AL732617) Mouse DNA sequence from clone RP23-196C23 on chro... 48 0.19 1
(AL732400) Mouse DNA sequence from clone RP23-92K6 on chromo... 48 0.19 1
(AL691421) Mouse DNA sequence from clone RP23-21A16 on chrom... 48 0.19 1
(AL672215) Mouse DNA sequence from clone RP23-162B19 on chro... 48 0.19 1
(AL663067) Mouse DNA sequence from clone RP23-23G3 on chromo... 48 0.19 1
(AL626770) Mouse DNA sequence from clone RP23-379J18 on chro... 48 0.19 1
(AL606922) Mouse DNA sequence from clone RP23-149E24 on chro... 48 0.19 1
(AC215886) Mus musculus BAC clone RP24-265A5 from chromosome... 48 0.19 1
(AC201931) Mus musculus BAC clone CH36-115H9 from chromosome... 48 0.19 1
(AC197499) Mus musculus BAC clone RP24-388C23 from chromosom... 48 0.19 1
(AC196041) Mus musculus BAC clone CH36-169B15 from chromosom... 48 0.19 1
(AC195063) Mus musculus BAC clone RP24-215L8 from chromosome... 48 0.19 1
(AC192086) Mus musculus BAC clone CH36-76M17 from chromosome... 48 0.19 1
(AC192081) Mus musculus BAC clone CH36-205D14 from chromosom... 48 0.19 1
(AC190183) Mus musculus BAC clone CH36-406B2 from chromosome... 48 0.19 1
(AC190162) Mus musculus BAC clone RP24-114B18 from chromosom... 48 0.19 1
(AC184149) Mus musculus BAC clone RP24-143K6 from chromosome... 48 0.19 1
(AC182445) Mus musculus BAC clone RP24-498N22 from chromosom... 48 0.19 1
(AC182111) Mus musculus BAC clone RP24-415L2 from chromosome... 48 0.19 1
(AC182038) Mus musculus BAC clone RP24-95H15 from chromosome... 48 0.19 1
(AC175384) Mus musculus BAC clone RP24-168P1 from chromosome... 48 0.19 1
(AC170599) Mus musculus BAC clone RP23-369P2 from chromosome... 48 0.19 1
(AC167143) Mus musculus BAC clone RP23-38J9 from chromosome ... 48 0.19 1
(AC166331) Mus musculus chromosome 3, clone RP23-277D9, comp... 48 0.19 1
(AC165960) Mus musculus BAC clone RP23-395M20 from chromosom... 48 0.19 1
(AC165336) Mus musculus BAC clone RP24-470O8 from chromosome... 48 0.19 1
(AC165153) Mus musculus BAC clone RP23-359L1 from chromosome... 48 0.19 1
(AC164555) Mus musculus BAC clone RP23-346G13 from chromosom... 48 0.19 1
(AC164170) Mus musculus 10 BAC RP24-419C12 (Roswell Park Can... 48 0.19 1
(AC164110) Mus musculus BAC clone RP23-307N19 from chromosom... 48 0.19 1
(AC164107) Mus musculus BAC clone RP23-461D6 from chromosome... 48 0.19 1
(AC163665) Mus musculus BAC clone RP23-325J23 from chromosom... 48 0.19 1
(AC163632) Mus musculus BAC clone RP23-339H2 from chromosome... 48 0.19 1
(AC163341) Mus musculus BAC clone RP24-138G13 from chromosom... 48 0.19 1
(AC162904) Mus musculus BAC clone RP24-152H15 from chromosom... 48 0.19 1
(AC162036) Mus musculus chromosome 3, clone RP24-324K2, comp... 48 0.19 1
(AC161603) Mus musculus BAC clone RP23-304M9 from chromosome... 48 0.19 1
(AC160128) Mus musculus BAC clone RP23-286G17 from chromosom... 48 0.19 1
(AC159290) Mus musculus BAC clone RP23-291I2 from chromosome... 48 0.19 1
(AC159139) Mus musculus 10 BAC RP24-370M23 (Roswell Park Can... 48 0.19 1
(AC159006) Mus musculus BAC clone RP23-36P21 from chromosome... 48 0.19 1
(AC158937) Mus musculus chromosome 3, clone RP23-290L18, com... 48 0.19 1
(AC158641) Mus musculus 10 BAC RP23-461E22 (Roswell Park Can... 48 0.19 1
(AC158602) Mus musculus 10 BAC RP23-136G23 (Roswell Park Can... 48 0.19 1
(AC158147) Mus musculus BAC clone RP23-323H18 from chromosom... 48 0.19 1
(AC157926) Mus musculus chromosome 3, clone RP24-61J18, comp... 48 0.19 1
(AC157517) Mus musculus BAC clone RP24-69C11 from chromosome... 48 0.19 1
(AC157278) Mus musculus BAC clone RP23-153L22 from chromosom... 48 0.19 1
(AC156801) Mus musculus BAC clone RP23-142F22 from chromosom... 48 0.19 1
(AC156389) Mus musculus 10 BAC RP24-308P8 (Roswell Park Canc... 48 0.19 1
(AC154589) Mus musculus BAC clone RP23-367D5 from chromosome... 48 0.19 1
(AC154339) Mus musculus BAC clone RP23-248O15 from chromosom... 48 0.19 1
(AC154277) Mus musculus BAC clone RP24-266G7 from 9, complet... 48 0.19 1
(AC154260) Mus musculus BAC clone RP24-225C5 from 17, comple... 48 0.19 1
(AC153609) Mus musculus 6 BAC RP23-77I23 (Roswell Park Cance... 48 0.19 1
(AC153563) Mus musculus 10 BAC RP23-455D21 (Roswell Park Can... 48 0.19 1
(AC153523) Mus musculus 10 BAC RP23-463C2 (Roswell Park Canc... 48 0.19 1
(AC153380) Mus musculus BAC RP23-256G5 (Roswell Park Cancer... 48 0.19 1
(AC152944) Mus musculus 10 BAC RP23-427I4 (Roswell Park Canc... 48 0.19 1
(AC150659) Mus musculus BAC clone RP24-147D24 from Y, comple... 48 0.19 1
(AC150658) Mus musculus BAC clone RP24-474E20 from chromosom... 48 0.19 1
(AC149597) Mus musculus BAC clone RP24-90B12 from Y, complet... 48 0.19 1
(AC148078) Mus musculus BAC clone RP24-186K12 from chromosom... 48 0.19 1
(AC147642) Mus musculus BAC clone RP23-27D6 from chromosome ... 48 0.19 1
(AC147233) Mus musculus BAC clone RP23-350J18 from chromosom... 48 0.19 1
(AC147135) Mus musculus BAC clone RP24-475E12 from chromosom... 48 0.19 1
(AC147105) Mus musculus BAC clone RP24-66E5 from chromosome ... 48 0.19 1
(AC146594) Mus musculus BAC clone RP24-155O13 from chromosom... 48 0.19 1
(AC146471) Mus musculus BAC clone RP24-534L1 from chromosome... 48 0.19 1
(AC145589) Mus musculus BAC clone RP24-174M10 from chromosom... 48 0.19 1
(AC145570) Mus musculus BAC clone RP24-95K23 from chromosome... 48 0.19 1
(AC145562) Mus musculus BAC clone RP24-67L21 from chromosome... 48 0.19 1
(AC144651) Mus musculus BAC clone RP24-251O18 from chromosom... 48 0.19 1
(AC141474) Mus musculus BAC clone RP24-192L11 from chromosom... 48 0.19 1
(AC140929) Mus musculus BAC clone RP23-258I3 from 8, complet... 48 0.19 1
(AC140924) Mus musculus BAC clone RP24-249B5 from Y, complet... 48 0.19 1
(AC140450) Mus musculus BAC clone RP24-164A12 from chromosom... 48 0.19 1
(AC140386) Mus musculus BAC clone RP24-88H19 from chromosome... 48 0.19 1
(AC139328) Mus musculus BAC clone RP24-299C21 from chromosom... 48 0.19 1
(AC139062) Mus musculus chromosome 17, clone RP23-69L11, com... 48 0.19 1
(AC138718) Mus musculus BAC clone RP23-221F8 from 14, comple... 48 0.19 1
(AC137583) Mus musculus chromosome 13, clone RP23-140F24, co... 48 0.19 1
(AC134852) Mus musculus BAC clone RP24-248B6 from chromosome... 48 0.19 1
(AC134596) Mus musculus BAC clone RP23-435C1 from chromosome... 48 0.19 1
(AC132867) Mus musculus chromosome 1, clone RP24-388I23, com... 48 0.19 1
(AC132407) Mus musculus BAC clone RP23-343G12 from 8, comple... 48 0.19 1
(AC132264) Mus musculus BAC clone RP24-371N18 from chromosom... 48 0.19 1
(AC132109) Mus musculus BAC clone RP24-172E19 from chromosom... 48 0.19 1
(AC131188) Mus musculus BAC clone RP24-272N18 from chromosom... 48 0.19 1
(AC130833) Mus musculus BAC clone RP24-91H16 from chromosome... 48 0.19 1
(AC128862) Rattus norvegicus 4 BAC CH230-419L6 (Children's H... 48 0.19 1
(AC128670) Mus musculus BAC clone RP23-137H4 from chromosome... 48 0.19 1
(AC128084) Rattus norvegicus BAC CH230-356B4 (Children's Ho... 48 0.19 1
(AC127418) Mus musculus BAC clone RP24-66J10 from chromosome... 48 0.19 1
(AC127374) Mus musculus BAC clone RP23-46G11 from chromosome... 48 0.19 1
(AC127359) Mus musculus BAC clone RP23-110G23 from chromosom... 48 0.19 1
(AC126022) Mus musculus BAC clone RP24-405F4 from chromosome... 48 0.19 1
(AC125523) Mus musculus BAC clone RP24-376O18 from chromosom... 48 0.19 1
(AC125448) Mus musculus chromosome 10, clone RP23-122D10, co... 48 0.19 1
(AC125193) Mus musculus BAC clone RP23-268I12 from chromosom... 48 0.19 1
(AC125158) Mus musculus BAC clone RP24-391P1 from chromosome... 48 0.19 1
(AC124980) Mus musculus chromosome 13, clone RP24-133J11, co... 48 0.19 1
(AC122918) Mus musculus chromosome 6 clone RP23-29F15, compl... 48 0.19 1
(AC122481) Mus musculus BAC clone RP24-357O20 from chromosom... 48 0.19 1
(AC122227) Mus musculus BAC clone RP23-131H10 from chromosom... 48 0.19 1
(AC122207) Mus musculus BAC clone RP23-88I22 from 16, comple... 48 0.19 1
(AC121883) Mus musculus BAC clone RP24-137J17 from 1, comple... 48 0.19 1
(AC120404) Mus musculus chromosome 6, clone RP24-405O23, com... 48 0.19 1
(AC118643) Mus musculus chromosome 1, clone RP24-113H21, com... 48 0.19 1
(AC118020) Mus musculus, clone RP23-459B19, complete sequence. 48 0.19 1
(AC118013) Mus musculus chromosome 1, clone RP23-455M18, com... 48 0.19 1
(AC117651) Mus musculus chromosome 3, clone RP23-287I17, com... 48 0.19 1
(AC116671) Mus musculus chromosome 3, clone RP23-111L16, com... 48 0.19 1
(AC116523) Mus musculus chromosome 9, clone RP24-349L11, com... 48 0.19 1
(AC116482) Mus musculus chromosome 8, clone RP23-423D8, comp... 48 0.19 1
(AC116458) Mus musculus chromosome 16, clone RP23-11L14, com... 48 0.19 1
(AC111321) Rattus norvegicus 4 BAC CH230-241A9 (Children's H... 48 0.19 1
(AC110517) Mus musculus chromosome 17, clone RP23-13F15, com... 48 0.19 1
(AC102821) Mus musculus chromosome 3, clone RP24-179A5, comp... 48 0.19 1
(AC102272) Mus musculus chromosome 3, clone RP24-283P8, comp... 48 0.19 1
(AC102038) Mus musculus chromosome 19, clone RP23-248G20, co... 48 0.19 1
(AC102009) Mus musculus chromosome 10, clone RP24-512D20, co... 48 0.19 1
(AC098641) Genomic sequence for Mus musculus, clone RP23-258... 48 0.19 1
(AC091396) Mus musculus strain C57BL6/J chromosome 6 clone R... 48 0.19 1
(AC073883) Mus musculus strain C57BL/6J chromosome 3 clone r... 48 0.19 1
(AC068501) Mus musculus strain C57BL6/J chromosome 6 clone R... 48 0.19 1
(AC068496) Mus musculus chromosome 3 clone RP23-75F13 clone ... 48 0.19 1
(AC209583) Pongo abelii BAC clone CH276-421F21 from chromoso... 48 0.19 1
(Z71632) S.cerevisiae chromosome XIV reading frame ORF YNR017w. 48 0.19 1
(Z71631) S.cerevisiae chromosome XIV reading frame ORF YNR016c. 48 0.19 1
(Z14156) S.cerevisiae ACC1 gene promoter region. 48 0.19 1
(M92156) Saccharomyces cerevisiae acetyl-CoA carboxylase (FA... 48 0.19 1
(FM992694) Candida dubliniensis CD36 chromosome 7, complete ... 48 0.19 1
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ... 48 0.19 1
(D88743) Arabidopsis thaliana mRNA for AR781, complete cds. 48 0.19 1
(DQ350702) Ajellomyces capsulatus nitrosative stress induced... 48 0.19 1
(CU638743) Podospora anserina genomic DNA chromosome 3, supe... 48 0.19 1
(CR382135) Debaryomyces hansenii strain CBS767 chromosome C ... 48 0.19 1
(CR382121) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 48 0.19 1
(BT012149) Arabidopsis thaliana At4g13160 mRNA, complete cds. 48 0.19 1
(BT011218) Arabidopsis thaliana At4g13160 gene, complete cds. 48 0.19 1
(AY150396) Arabidopsis thaliana AR781 (At2g26530) mRNA, comp... 48 0.19 1
(AY087287) Arabidopsis thaliana clone 33680 mRNA, complete s... 48 0.19 1
(AY050988) Arabidopsis thaliana putative yeast pheromone rec... 48 0.19 1
(AP008214) Oryza sativa (japonica cultivar-group) genomic DN... 48 0.19 1
(AP008212) Oryza sativa (japonica cultivar-group) genomic DN... 48 0.19 1
(AP008209) Oryza sativa (japonica cultivar-group) genomic DN... 48 0.19 1
(AP007162) Aspergillus oryzae RIB40 genomic DNA, SC102. 48 0.19 1
(AP006177) Oryza sativa Japonica Group genomic DNA, chromoso... 48 0.19 1
(AP003928) Oryza sativa Japonica Group genomic DNA, chromoso... 48 0.19 1
(AM487725) Vitis vinifera contig VV78X195781.3, whole genome... 48 0.19 1
(AM479802) Vitis vinifera, whole genome shotgun sequence, co... 48 0.19 1
(AL161535) Arabidopsis thaliana DNA chromosome 4, contig fra... 48 0.19 1
(AL111471) Botrytis cinerea strain T4 cDNA library. 48 0.19 1
(AL049751) Arabidopsis thaliana DNA chromosome 4, BAC clone ... 48 0.19 1
(AK229003) Arabidopsis thaliana mRNA for hypothetical protei... 48 0.19 1
(AK105625) Oryza sativa Japonica Group cDNA clone:001-200-C1... 48 0.19 1
(AC099043) Oryza sativa chromosome 3 BAC OSJNBa0079B15 genom... 48 0.19 1
(AC003028) Arabidopsis thaliana chromosome 2 clone F16M14 ma... 48 0.19 1
(AC002505) Arabidopsis thaliana chromosome 2 clone T9J22 map... 48 0.19 1
(EA684615) Sequence 63494 from patent US 7365185. 48 0.19 1
(EA684473) Sequence 63352 from patent US 7365185. 48 0.19 1
(EA682306) Sequence 61185 from patent US 7365185. 48 0.19 1
(E11450) cDNA encoding plant protein which induces meiosis a... 48 0.19 1
(DL341539) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS. 48 0.19 1
(DL341538) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS. 48 0.19 1
(DJ207988) Method for identification of useful proteins deri... 48 0.19 1
(DJ207987) Method for identification of useful proteins deri... 48 0.19 1
(DJ025882) Genome-wide DNA marker of Saccharomyces cerevisiae. 48 0.19 1
(CS789839) Sequence 1095 from Patent WO2005031001. 48 0.19 1
(CQ588005) Sequence 15763 from Patent WO0171042. 48 0.19 1
(AX770903) Sequence 34 from Patent WO02094867. 48 0.19 1
(AR545325) Sequence 456 from patent US 6747137. 48 0.19 1
(AR518340) Sequence 23300 from patent US 6703491. 48 0.19 1
(AR503058) Sequence 8018 from patent US 6703491. 48 0.19 1
(AY397656) Goniastrea favulus microsatellite Gf69 sequence. 48 0.19 1
(AE014816) Plasmodium falciparum 3D7 chromosome 14 section 1... 48 0.19 1
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 48 0.19 1
(AC010041) Drosophila melanogaster 3L BAC RP98-13D12 (Roswel... 48 0.19 1
(AC010040) Drosophila melanogaster 3L BAC RP98-13E21 (Roswel... 48 0.19 1
(AC149905) Strongylocentrotus purpuratus clone R3-12D7, WORK... 48 0.19 1
(AC140002) Rattus norvegicus clone CH230-148M20, WORKING DRA... 48 0.19 1
(AC139908) Rattus norvegicus clone CH230-318N5, WORKING DRAF... 48 0.19 1
(AC138220) Mus musculus clone RP23-203P17, LOW-PASS SEQUENCE... 48 0.19 1
(AC137215) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 48 0.19 1
(AC137167) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 48 0.19 1
(AC136988) Mus musculus clone RP23-327J16, LOW-PASS SEQUENCE... 48 0.19 1
(AC136583) Rattus norvegicus clone CH230-4H16, *** SEQUENCIN... 48 0.19 1
(AC136558) Rattus norvegicus clone CH230-251K23, *** SEQUENC... 48 0.19 1
(AC136483) Rattus norvegicus clone CH230-460P23, *** SEQUENC... 48 0.19 1
(AC136065) Rattus norvegicus clone CH230-85M19, *** SEQUENCI... 48 0.19 1
(AC135301) Rattus norvegicus clone CH230-45E14, *** SEQUENCI... 48 0.19 1
(AC135275) Rattus norvegicus clone CH230-35M21, *** SEQUENCI... 48 0.19 1
(AC135031) Rattus norvegicus clone CH230-257H4, WORKING DRAF... 48 0.19 1
(AC134799) Rattus norvegicus clone CH230-289L17, WORKING DRA... 48 0.19 1
(AC134088) Rattus norvegicus clone CH230-327O1, *** SEQUENCI... 48 0.19 1
(AC133225) Rattus norvegicus clone CH230-438F20, WORKING DRA... 48 0.19 1
(AC132999) Rattus norvegicus clone CH230-5A19, WORKING DRAFT... 48 0.19 1
(AC132652) Rattus norvegicus clone CH230-294J16, WORKING DRA... 48 0.19 1
(AC132635) Rattus norvegicus clone CH230-61J5, WORKING DRAFT... 48 0.19 1
(AC132531) Rattus norvegicus clone CH230-212C6, *** SEQUENCI... 48 0.19 1
(AC131854) Rattus norvegicus clone CH230-96G13, WORKING DRAF... 48 0.19 1
(AC131612) Rattus norvegicus clone CH230-117B15, *** SEQUENC... 48 0.19 1
(AC131193) Rattus norvegicus clone CH230-47D15, *** SEQUENCI... 48 0.19 1
(AC130503) Rattus norvegicus clone CH230-161B2, WORKING DRAF... 48 0.19 1
(AC130048) Rattus norvegicus clone CH230-473L13, *** SEQUENC... 48 0.19 1
(AC129706) Rattus norvegicus clone CH230-8I19, *** SEQUENCIN... 48 0.19 1
(AC128950) Rattus norvegicus clone CH230-512N7, *** SEQUENCI... 48 0.19 1
(AC128387) Rattus norvegicus clone CH230-111K11, *** SEQUENC... 48 0.19 1
(AC128367) Rattus norvegicus clone CH230-116K1, *** SEQUENCI... 48 0.19 1
(AC128364) Rattus norvegicus clone CH230-46H4, WORKING DRAFT... 48 0.19 1
(AC128102) Rattus norvegicus clone CH230-322A18, WORKING DRA... 48 0.19 1
(AC127802) Rattus norvegicus clone CH230-30A6, WORKING DRAFT... 48 0.19 1
(AC127792) Rattus norvegicus clone CH230-107N4, *** SEQUENCI... 48 0.19 1
(AC127744) Rattus norvegicus clone CH230-187C19, WORKING DRA... 48 0.19 1
(AC127602) Rattus norvegicus clone CH230-20M3, *** SEQUENCIN... 48 0.19 1
(AC126985) Rattus norvegicus clone CH230-193C18, *** SEQUENC... 48 0.19 1
(AC126947) Rattus norvegicus clone CH230-156F15, *** SEQUENC... 48 0.19 1
(AC126847) Rattus norvegicus clone CH230-19L4, WORKING DRAFT... 48 0.19 1
(AC126841) Rattus norvegicus clone CH230-10D21, *** SEQUENCI... 48 0.19 1
(AC126652) Rattus norvegicus clone CH230-55K6, *** SEQUENCIN... 48 0.19 1
(AC126493) Rattus norvegicus clone CH230-309F11, WORKING DRA... 48 0.19 1
(AC126106) Rattus norvegicus clone CH230-26O4, *** SEQUENCIN... 48 0.19 1
(AC125938) Rattus norvegicus clone CH230-11B3, *** SEQUENCIN... 48 0.19 1
(AC125926) Rattus norvegicus clone CH230-460A3, WORKING DRAF... 48 0.19 1
(AC125883) Rattus norvegicus clone CH230-459G21, *** SEQUENC... 48 0.19 1
(AC125836) Rattus norvegicus clone CH230-204J23, *** SEQUENC... 48 0.19 1
(AC125763) Rattus norvegicus clone CH230-109C20, *** SEQUENC... 48 0.19 1
(AC125548) Rattus norvegicus clone CH230-7B17, *** SEQUENCIN... 48 0.19 1
(AC124937) Rattus norvegicus clone CH230-165E10, *** SEQUENC... 48 0.19 1
(AC123468) Rattus norvegicus clone CH230-50L23, *** SEQUENCI... 48 0.19 1
(AC123390) Rattus norvegicus clone CH230-514P9, *** SEQUENCI... 48 0.19 1
(AC123351) Rattus norvegicus clone CH230-276F12, *** SEQUENC... 48 0.19 1
(AC123140) Rattus norvegicus clone CH230-189F23, *** SEQUENC... 48 0.19 1
(AC123133) Rattus norvegicus clone CH230-141K15, *** SEQUENC... 48 0.19 1
(AC121676) Rattus norvegicus clone CH230-509I18, *** SEQUENC... 48 0.19 1
(AC121623) Rattus norvegicus clone CH230-224J13, *** SEQUENC... 48 0.19 1
(AC121399) Rattus norvegicus clone CH230-293A24, *** SEQUENC... 48 0.19 1
(AC121197) Rattus norvegicus clone CH230-24F15, *** SEQUENCI... 48 0.19 1
(AC121051) Rattus norvegicus clone CH230-458M11, WORKING DRA... 48 0.19 1
(AC120948) Rattus norvegicus clone CH230-464K18, *** SEQUENC... 48 0.19 1
(AC120698) Rattus norvegicus clone CH230-82C10, *** SEQUENCI... 48 0.19 1
(AC119696) Rattus norvegicus clone CH230-153L18, WORKING DRA... 48 0.19 1
(AC119353) Rattus norvegicus clone CH230-413H6, *** SEQUENCI... 48 0.19 1
(AC118893) Rattus norvegicus clone CH230-492M9, WORKING DRAF... 48 0.19 1
(AC118804) Rattus norvegicus clone CH230-131C23, WORKING DRA... 48 0.19 1
(AC118699) Mus musculus clone RP24-459N22, WORKING DRAFT SEQ... 48 0.19 1
(AC118163) Rattus norvegicus clone CH230-394C6, WORKING DRAF... 48 0.19 1
(AC118024) Mus musculus clone RP23-461E22, WORKING DRAFT SEQ... 48 0.19 1
(AC117172) Rattus norvegicus clone CH230-33D19, *** SEQUENCI... 48 0.19 1
(AC116869) Mus musculus chromosome 10 clone RP24-414K13 map ... 48 0.19 1
(AC116518) Mus musculus clone RP24-340K9, LOW-PASS SEQUENCE ... 48 0.19 1
(AC116056) Rattus norvegicus clone CH230-174F7, *** SEQUENCI... 48 0.19 1
(AC115400) Rattus norvegicus clone CH230-59M6, *** SEQUENCIN... 48 0.19 1
(AC115383) Rattus norvegicus clone CH230-334B5, *** SEQUENCI... 48 0.19 1
(AC114030) Rattus norvegicus clone CH230-36M9, *** SEQUENCIN... 48 0.19 1
(AC113837) Rattus norvegicus clone CH230-77F6, *** SEQUENCIN... 48 0.19 1
(AC113760) Rattus norvegicus clone CH230-101A13, WORKING DRA... 48 0.19 1
(AC113750) Rattus norvegicus clone CH230-186O6, *** SEQUENCI... 48 0.19 1
(AC113663) Rattus norvegicus clone CH230-158J20, *** SEQUENC... 48 0.19 1
(AC113642) Rattus norvegicus clone CH230-22G19, WORKING DRAF... 48 0.19 1
(AC112875) Rattus norvegicus clone CH230-229J15, *** SEQUENC... 48 0.19 1
(AC112809) Rattus norvegicus clone CH230-357M2, *** SEQUENCI... 48 0.19 1
(AC112754) Rattus norvegicus clone CH230-329J3, WORKING DRAF... 48 0.19 1
(AC112632) Rattus norvegicus clone CH230-110J15, WORKING DRA... 48 0.19 1
(AC112627) Rattus norvegicus clone CH230-110A7, *** SEQUENCI... 48 0.19 1
(AC112626) Rattus norvegicus clone CH230-304H11, *** SEQUENC... 48 0.19 1
(AC112528) Rattus norvegicus clone CH230-221D6, WORKING DRAF... 48 0.19 1
(AC112363) Rattus norvegicus clone CH230-308N18, *** SEQUENC... 48 0.19 1
(AC112110) Rattus norvegicus clone CH230-156K15, *** SEQUENC... 48 0.19 1
(AC111998) Rattus norvegicus clone CH230-54H8, WORKING DRAFT... 48 0.19 1
(AC111518) Rattus norvegicus clone CH230-142F15, WORKING DRA... 48 0.19 1
(AC110947) Rattus norvegicus clone CH230-17C5, WORKING DRAFT... 48 0.19 1
(AC110659) Rattus norvegicus clone CH230-195J2, WORKING DRAF... 48 0.19 1
(AC110548) Mus musculus clone RP23-230D8, WORKING DRAFT SEQU... 48 0.19 1
(AC110446) Rattus norvegicus clone CH230-177I14, *** SEQUENC... 48 0.19 1
(AC110401) Rattus norvegicus clone CH230-41K9, *** SEQUENCIN... 48 0.19 1
(AC110321) Rattus norvegicus clone CH230-272M10, *** SEQUENC... 48 0.19 1
(AC109879) Rattus norvegicus clone CH230-310E20, *** SEQUENC... 48 0.19 1
(AC109710) Rattus norvegicus clone CH230-185H14, *** SEQUENC... 48 0.19 1
(AC108581) Rattus norvegicus clone CH230-250F2, *** SEQUENCI... 48 0.19 1
(AC108549) Rattus norvegicus clone CH230-192J19, *** SEQUENC... 48 0.19 1
(AC108287) Rattus norvegicus clone CH230-188B3, WORKING DRAF... 48 0.19 1
(AC108286) Rattus norvegicus clone CH230-186I1, WORKING DRAF... 48 0.19 1
(AC108267) Rattus norvegicus clone CH230-127P8, *** SEQUENCI... 48 0.19 1
(AC108239) Rattus norvegicus clone CH230-133H10, *** SEQUENC... 48 0.19 1
(AC107793) Mus musculus clone RP23-475L24, WORKING DRAFT SEQ... 48 0.19 1
(AC107597) Rattus norvegicus clone CH230-142A16, WORKING DRA... 48 0.19 1
(AC107571) Rattus norvegicus clone CH230-62A24, *** SEQUENCI... 48 0.19 1
(AC107404) Rattus norvegicus clone CH230-103L10, *** SEQUENC... 48 0.19 1
(AC107252) Rattus norvegicus clone CH230-11P3, *** SEQUENCIN... 48 0.19 1
(AC106944) Rattus norvegicus clone CH230-37I8, *** SEQUENCIN... 48 0.19 1
(AC106440) Rattus norvegicus clone CH230-194D24, *** SEQUENC... 48 0.19 1
(AC106181) Rattus norvegicus clone CH230-116O11, *** SEQUENC... 48 0.19 1
(AC105849) Rattus norvegicus chromosome 18 clone CH230-219F8... 48 0.19 1
(AC104291) Rattus norvegicus clone CH230-132I24, *** SEQUENC... 48 0.19 1
(AC102094) Mus musculus clone RP23-30D2, WORKING DRAFT SEQUE... 48 0.19 1
(AC101759) Mus musculus clone RP24-83G6, WORKING DRAFT SEQUE... 48 0.19 1
(AC099456) Rattus norvegicus clone CH230-74O4, *** SEQUENCIN... 48 0.19 1
(AC099248) Rattus norvegicus clone CH230-191M18, WORKING DRA... 48 0.19 1
(AC099167) Rattus norvegicus clone CH230-56E4, *** SEQUENCIN... 48 0.19 1
(AC098666) Rattus norvegicus clone CH230-74M22, WORKING DRAF... 48 0.19 1
(AC098639) Rattus norvegicus clone CH230-201M15, *** SEQUENC... 48 0.19 1
(AC098302) Rattus norvegicus clone CH230-1N1, *** SEQUENCING... 48 0.19 1
(AC098273) Rattus norvegicus clone CH230-1J9, *** SEQUENCING... 48 0.19 1
(AC098191) Rattus norvegicus clone CH230-198G18, *** SEQUENC... 48 0.19 1
(AC097890) Rattus norvegicus clone CH230-23E18, WORKING DRAF... 48 0.19 1
(AC097802) Rattus norvegicus clone CH230-22B15, *** SEQUENCI... 48 0.19 1
(AC097749) Rattus norvegicus clone CH230-74I7, *** SEQUENCIN... 48 0.19 1
(AC097698) Rattus norvegicus clone CH230-189A14, *** SEQUENC... 48 0.19 1
(AC097544) Rattus norvegicus clone CH230-102O7, WORKING DRAF... 48 0.19 1
(AC097311) Rattus norvegicus clone CH230-191E1, WORKING DRAF... 48 0.19 1
(AC096529) Rattus norvegicus clone CH230-128D22, WORKING DRA... 48 0.19 1
(AC096481) Rattus norvegicus clone CH230-169L11, WORKING DRA... 48 0.19 1
(AC096447) Rattus norvegicus clone CH230-117J7, WORKING DRAF... 48 0.19 1
(AC096373) Rattus norvegicus clone CH230-16M5, WORKING DRAFT... 48 0.19 1
(AC096251) Rattus norvegicus clone CH230-85K16, WORKING DRAF... 48 0.19 1
(AC096042) Rattus norvegicus clone CH230-15H12, WORKING DRAF... 48 0.19 1
(AC095994) Rattus norvegicus clone CH230-31P18, *** SEQUENCI... 48 0.19 1
(AC095786) Rattus norvegicus clone CH230-9L23, WORKING DRAFT... 48 0.19 1
(AC095748) Rattus norvegicus clone CH230-8F4, *** SEQUENCING... 48 0.19 1

>(BJ401739) Dictyostelium discoideum cDNA clone:dds19b07, 3' end,
single read.
Length = 313

Score = 369 bits (186), Expect(2) = e-114
Identities = 201/201 (100%)
Strand = Plus / Minus


Query: 1 aaccaccactacagnccggctcctgctgatctattaaatttcaatggtccaaatggtctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aaccaccactacagnccggctcctgctgatctattaaatttcaatggtccaaatggtctt 254


Query: 61 cctgtaccaattcctggtataccaggttcttatatttcagtgatnncaggtggtggaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cctgtaccaattcctggtataccaggttcttatatttcagtgatnncaggtggtggaaat 194


Query: 121 ttatntcaactcttatcaaatcaaaatactacaactagaagacaaacttcaagaagatcn 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ttatntcaactcttatcaaatcaaaatactacaactagaagacaaacttcaagaagatcn 134


Query: 181 agagatccaaattcaagtggt 201
|||||||||||||||||||||
Sbjct: 133 agagatccaaattcaagtggt 113

Score = 77.8 bits (39), Expect(2) = e-114
Identities = 39/39 (100%)
Strand = Plus / Minus


Query: 274 ccaacacgaacaagaacaagaacaagaacatcatcaact 312
|||||||||||||||||||||||||||||||||||||||
Sbjct: 40 ccaacacgaacaagaacaagaacaagaacatcatcaact 2

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 260,152,946
Number of extensions: 15506064
Number of successful extensions: 1223730
Number of sequences better than 10.0: 1777
Length of query: 312
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 289
Effective length of database: 99,442,330,388
Effective search space: 28738833482132
Effective search space used: 28738833482132
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 7.29
Homology vs Protein
Query= Contig-U03670-1 (Contig-U03670-1Q) /CSM_Contig/Contig-U03670-1Q.Seq.d
(312 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

***** No hits found ******

Lambda K H
0.317 0.147 0.489

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 280,403,498
Number of extensions: 3925248
Number of successful extensions: 10579
Number of sequences better than 10.0: 0
Number of HSP's gapped: 10573
Number of HSP's successfully gapped: 0
Length of query: 104
Length of database: 1,061,185,681
Length adjustment: 72
Effective length of query: 32
Effective length of database: 825,857,425
Effective search space: 26427437600
Effective search space used: 26427437600
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 28 (15.4 bits)

PSORT

psg: 0.75 gvh: 0.43 alm: 0.47 top: 0.53 tms: 0.00 mit: 0.31 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: cytoplasmic
28.0 %: nuclear
16.0 %: mitochondrial
8.0 %: cytoskeletal
4.0 %: endoplasmic reticulum
4.0 %: peroxisomal

>> prediction for Contig-U03670-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0