>Contig-U03569-1 (Contig-U03569-1Q) /CSM_Contig/Contig-U03569-1Q.Seq.d
AAAAGATAAAAAAAGTAAAAGAAAACATAGAAAGAAAAAGAAGAAAAAGA
GTGAAAAACTTGAAAAAACTTATTATGGAAAGAGTGCAGCAGTTTCAATG
TATTCATTAAGTACATTTTTAAATAAACAAAATTTAGATGATCTATTATG
GTATGCAGTATTGGGTTTAACAGATCAATTCATTCATGAAAAGATTACAT
TAGACTCTTATGAACAACAATATAAAAATTTTAAAGAATTAATTTTAAAT
AATTATCCAACCGATGGCGATGATGACCAAGAAGAAAGATATAGGCCAGG
TAATGACGAGGATGATTATGACGAAAATGGGGATTTAAAGAGACATCCAT
CGTCAATGTTCTTGCATGGCGATAAGATTATACCAAGTGACGATTTCAGA
TTCATGCTTTACAGACATTGGAATCTTTACGAATCATTATTCAACTCGCG
TTATGTTGCATGCAAACTCAGGGTCTGGAAAGCCAAAGGCAGGTTCCAGC
TCGAGTCGTTATTCGCAATGATGGGCATACCGTTGGACCAGGTGAAGCAA
AAGTACAACTCGATGAATGTCCATTACAAGAAACAGTTGAAACAACTACT
CGCTATCAACGGCCCAAAGTTTGGTTTGGTGAATTTATATTTCAATAGTT
TTCTTAAAAAGTATTCAAACAATTCAGAAATATCAGCGTCAGATACAGTT
TATGCAGTGACCGCGTTAATGGAGTCTGATAATTTAGAATCGGATCAATC
GGATCAAGACATTTGGGAACAAAATTTTTGGGAAGCTTATGACTCAATCT
CAAATAAAAATATTGATCTATTAAAGATTGGTTTAAAACAATCGATTCAA
TTACAAAAGGAAATCACTCGTCAAGTAACTTCAATGATTGAAAAACGTAG
TGTTATCTTGTCTGGTCCATTCAGATATGCATTCATCACAGAATCTTCAG
ATTTAAAATATTTCATTCATCCATTGGCACTAACTAAATTAGGTTTATTC
ATGATGGATGCTTTCATTTCAATGGGTAAAGCTAAAAGACCTTTCTTAAT
TGGTGCTTTAAATGAAAATAAAAATTCTTATTTAATTGTTGGTATTTCTG
GTTCACATAGTACTGATATTCAATCAAATACATTTGGTGAATATTTTAGA
AAATCAGCTGAATATACAGATGCAACATTTAAATATCAATCATTTGATAC
ATCAATTGTTGAAGTTTCAAAAACAGATTTACATAAATTTGTAGAACATC
TTCATGGTACAATGCAAACAACTCAAATTTCTAAATAAAAAT

est1=SLA410E,1,1293
est2=SFF840Z,591,1190

KDKKSKRKHRKKKKKKSEKLEKTYYGKSAAVSMYSLSTFLNKQNLDDLLWYAVLGLTDQF
IHEKITLDSYEQQYKNFKELILNNYPTDGDDDQEERYRPGNDEDDYDENGDLKRHPSSMF
LHGDKIIPSDDFRFMLYRHWNLYESLFNSRYVACKLRVWKAKGRFQLESLFAMMGIPLDQ
VKQKYNSMNVHYKKQLKQLLAINGPKFGLVNLYFNSFLKKYSNNSEISASDTVYAVTALM
ESDNLESDQSDQDIWEQNFWEAYDSISNKNIDLLKIGLKQSIQLQKEITRQVTSMIEKRS
VILSGPFRYAFITESSDLKYFIHPLALTKLGLFMMDAFISMGKAKRPFLIGALNENKNSY
LIVGISGSHSTDIQSNTFGEYFRKSAEYTDATFKYQSFDTSIVEVSKTDLHKFVEHLHGT
MQTTQISK*k

Frame A:
kr*kk*kkt*kekeeke*kt*knllwkecssfnvfikyifk*tkfr*simvcsigfnrsi
hs*kdyirll*tti*kf*rinfk*lsnrwr**prrki*ar**rg*l*rkwgfketsivnv
lawr*dytk*rfqihalqtleslriiiqlalccmqtqglesqrqvparvvirndghtvgp
geakvqldecplqetvetttryqrpkvwfgefifq*fs*kvfkqfrnisvryslcsdrvn
gv**frigsigsrhlgtkflgsl*lnlk*ky*sikdwfktidsitkgnhsssnfnd*kt*
cylvwsiqicihhrifrfkifhssigtn*irfihdgcfhfng*s*ktflnwcfk*k*kfl
fncwyfwft*y*ysikyiw*if*kis*iyrcni*isii*yinc*sfknrft*icrtsswy
nannsnf*ik


Frame B:
KDKKSKRKHRKKKKKKSEKLEKTYYGKSAAVSMYSLSTFLNKQNLDDLLWYAVLGLTDQF
IHEKITLDSYEQQYKNFKELILNNYPTDGDDDQEERYRPGNDEDDYDENGDLKRHPSSMF
LHGDKIIPSDDFRFMLYRHWNLYESLFNSRYVACKLRVWKAKGRFQLESLFAMMGIPLDQ
VKQKYNSMNVHYKKQLKQLLAINGPKFGLVNLYFNSFLKKYSNNSEISASDTVYAVTALM
ESDNLESDQSDQDIWEQNFWEAYDSISNKNIDLLKIGLKQSIQLQKEITRQVTSMIEKRS
VILSGPFRYAFITESSDLKYFIHPLALTKLGLFMMDAFISMGKAKRPFLIGALNENKNSY
LIVGISGSHSTDIQSNTFGEYFRKSAEYTDATFKYQSFDTSIVEVSKTDLHKFVEHLHGT
MQTTQISK*k


Frame C:
kikkvkenierkrrkrvknlkklimervqqfqcih*vhf*inki*miyygmqywv*qins
fmkrlh*tlmnnnikilkn*f*iiiqpmammtkkkdigqvmtrmimtkmgi*rdihrqcs
cmairlyqvtisdscftdigiftnhystrvmlhansgsgkpkagssssrysq*wayrwtr
*sksttr*msitrns*nnyslstaqslvw*iyisivflksiqtiqkyqrqiqfmq*pr*w
slii*nrinriktfgnkifgklmtqsqikiliy*rlv*nnrfnykrkslvk*lq*lknvv
lsclvhsdmhssqnlqi*nisfihwh*ln*vys*wmlsfqwvklkdls*lvl*mkikili
*llvflvhivlifnqihlvnilenqlniqmqhlninhlihqllkfqkqiyinl*nifmvq
ckqlkflnkn

Query= Contig-U03569-1 (Contig-U03569-1Q)
/CSM_Contig/Contig-U03569-1Q.Seq.d
         (1292 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U03569-1 (Contig-U03569-1Q) /CSM_Contig/Conti...  2426  0.0
Contig-U09320-1 (Contig-U09320-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U14640-1 (Contig-U14640-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U11881-1 (Contig-U11881-1Q) /CSM_Contig/Conti...    38  0.023
Contig-U09426-1 (Contig-U09426-1Q) /CSM_Contig/Conti...    38  0.023
Contig-U14164-1 (Contig-U14164-1Q) /CSM_Contig/Conti...    36  0.091
Contig-U14040-1 (Contig-U14040-1Q) /CSM_Contig/Conti...    36  0.091
Contig-U09715-1 (Contig-U09715-1Q) /CSM_Contig/Conti...    36  0.091
Contig-U14902-1 (Contig-U14902-1Q) /CSM_Contig/Conti...    34  0.36
Contig-U14899-1 (Contig-U14899-1Q) /CSM_Contig/Conti...    34  0.36

>Contig-U03569-1 (Contig-U03569-1Q) /CSM_Contig/Contig-U03569-1Q.Seq.d
          Length = 1292

 Score = 2426 bits (1224), Expect = 0.0
 Identities = 1224/1224 (100%)
 Strand = Plus / Plus

                                                                        
Query: 69   cttattatggaaagagtgcagcagtttcaatgtattcattaagtacatttttaaataaac 128
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69   cttattatggaaagagtgcagcagtttcaatgtattcattaagtacatttttaaataaac 128

                                                                        
Query: 129  aaaatttagatgatctattatggtatgcagtattgggtttaacagatcaattcattcatg 188
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129  aaaatttagatgatctattatggtatgcagtattgggtttaacagatcaattcattcatg 188

                                                                        
Query: 189  aaaagattacattagactcttatgaacaacaatataaaaattttaaagaattaattttaa 248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189  aaaagattacattagactcttatgaacaacaatataaaaattttaaagaattaattttaa 248

                                                                        
Query: 249  ataattatccaaccgatggcgatgatgaccaagaagaaagatataggccaggtaatgacg 308
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249  ataattatccaaccgatggcgatgatgaccaagaagaaagatataggccaggtaatgacg 308

                                                                        
Query: 309  aggatgattatgacgaaaatggggatttaaagagacatccatcgtcaatgttcttgcatg 368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309  aggatgattatgacgaaaatggggatttaaagagacatccatcgtcaatgttcttgcatg 368

                                                                        
Query: 369  gcgataagattataccaagtgacgatttcagattcatgctttacagacattggaatcttt 428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369  gcgataagattataccaagtgacgatttcagattcatgctttacagacattggaatcttt 428

                                                                        
Query: 429  acgaatcattattcaactcgcgttatgttgcatgcaaactcagggtctggaaagccaaag 488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429  acgaatcattattcaactcgcgttatgttgcatgcaaactcagggtctggaaagccaaag 488

                                                                        
Query: 489  gcaggttccagctcgagtcgttattcgcaatgatgggcataccgttggaccaggtgaagc 548
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489  gcaggttccagctcgagtcgttattcgcaatgatgggcataccgttggaccaggtgaagc 548

                                                                        
Query: 549  aaaagtacaactcgatgaatgtccattacaagaaacagttgaaacaactactcgctatca 608
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549  aaaagtacaactcgatgaatgtccattacaagaaacagttgaaacaactactcgctatca 608

                                                                        
Query: 609  acggcccaaagtttggtttggtgaatttatatttcaatagttttcttaaaaagtattcaa 668
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609  acggcccaaagtttggtttggtgaatttatatttcaatagttttcttaaaaagtattcaa 668

                                                                        
Query: 669  acaattcagaaatatcagcgtcagatacagtttatgcagtgaccgcgttaatggagtctg 728
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669  acaattcagaaatatcagcgtcagatacagtttatgcagtgaccgcgttaatggagtctg 728

                                                                        
Query: 729  ataatttagaatcggatcaatcggatcaagacatttgggaacaaaatttttgggaagctt 788
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729  ataatttagaatcggatcaatcggatcaagacatttgggaacaaaatttttgggaagctt 788

                                                                        
Query: 789  atgactcaatctcaaataaaaatattgatctattaaagattggtttaaaacaatcgattc 848
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789  atgactcaatctcaaataaaaatattgatctattaaagattggtttaaaacaatcgattc 848

                                                                        
Query: 849  aattacaaaaggaaatcactcgtcaagtaacttcaatgattgaaaaacgtagtgttatct 908
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849  aattacaaaaggaaatcactcgtcaagtaacttcaatgattgaaaaacgtagtgttatct 908

                                                                        
Query: 909  tgtctggtccattcagatatgcattcatcacagaatcttcagatttaaaatatttcattc 968
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909  tgtctggtccattcagatatgcattcatcacagaatcttcagatttaaaatatttcattc 968

                                                                        
Query: 969  atccattggcactaactaaattaggtttattcatgatggatgctttcatttcaatgggta 1028
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969  atccattggcactaactaaattaggtttattcatgatggatgctttcatttcaatgggta 1028

                                                                        
Query: 1029 aagctaaaagacctttcttaattggtgctttaaatgaaaataaaaattcttatttaattg 1088
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 aagctaaaagacctttcttaattggtgctttaaatgaaaataaaaattcttatttaattg 1088

                                                                        
Query: 1089 ttggtatttctggttcacatagtactgatattcaatcaaatacatttggtgaatatttta 1148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 ttggtatttctggttcacatagtactgatattcaatcaaatacatttggtgaatatttta 1148

                                                                        
Query: 1149 gaaaatcagctgaatatacagatgcaacatttaaatatcaatcatttgatacatcaattg 1208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1149 gaaaatcagctgaatatacagatgcaacatttaaatatcaatcatttgatacatcaattg 1208

                                                                        
Query: 1209 ttgaagtttcaaaaacagatttacataaatttgtagaacatcttcatggtacaatgcaaa 1268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1209 ttgaagtttcaaaaacagatttacataaatttgtagaacatcttcatggtacaatgcaaa 1268

                                    
Query: 1269 caactcaaatttctaaataaaaat 1292
            ||||||||||||||||||||||||
Sbjct: 1269 caactcaaatttctaaataaaaat 1292


>Contig-U09320-1 (Contig-U09320-1Q) /CSM_Contig/Contig-U09320-1Q.Seq.d
          Length = 1006

 Score = 42.1 bits (21), Expect = 0.001
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 263 gatggcgatgatgaccaagaagaaa 287
           |||| ||||||||||||||||||||
Sbjct: 797 gatgacgatgatgaccaagaagaaa 821


>Contig-U14640-1 (Contig-U14640-1Q) /CSM_Contig/Contig-U14640-1Q.Seq.d
          Length = 575

 Score = 40.1 bits (20), Expect = 0.006
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 agaattaattttaaataatt 254
           ||||||||||||||||||||
Sbjct: 372 agaattaattttaaataatt 391


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 21,884
Number of Sequences: 6905
Number of extensions: 21884
Number of successful extensions: 2330
Number of sequences better than 10.0: 271
length of query: 1292
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1276
effective length of database: 5,564,391
effective search space: 7100162916
effective search space used: 7100162916
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U03569-1 (Contig-U03569-1Q) /CSM_Contig/Contig-U03569-1Q.Seq.d
         (1292 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(C25560) Dictyostelium discoideum slug cDNA, clone SLA410.       1384   0.0    1
(BJ398444) Dictyostelium discoideum cDNA clone:dds12p10, 3' ...  1189   0.0    1
(AU060138) Dictyostelium discoideum slug cDNA, clone SLA410.     1124   0.0    1
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69...    36   3e-04  11
(AC090251) Homo sapiens chromosome 11 clone RP11-7D2 map 11,...    46   0.006  2
(AC004709) Plasmodium falciparum chromosome 12, *** SEQUENCI...    36   0.047  7
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome.         42   0.048  20
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    38   0.077  16
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com...    38   0.077  16
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ...    36   0.100  10
(AC009881) Homo sapiens chromosome 4 clone RP11-392L20 map 4...    38   0.10   8
(AC183686) Pan troglodytes BAC clone CH251-209O13 from chrom...    38   0.11   9
(CU242103) Equus caballus GSS, BAC clone CH241-390M19, T7 en...    38   0.17   2
(AC218159) Zea mays chromosome 9 clone CH201-460N19; ZMMBBc0...    50   0.22   1
(ET974980) CHO_OF680xk12r1.ab1 CHO_OF Nicotiana tabacum geno...    50   0.22   1
(EJ016990) 1095439018455 Global-Ocean-Sampling_GS-26-01-01-1...    50   0.22   1
(DX107436) 644_2_14141678_5489_43321_010.ab1 Sugar beet unfi...    50   0.22   1
(AC180742) Strongylocentrotus purpuratus clone R3-3083B1, WO...    40   0.23   8
(CE824623) tigr-gss-dog-17000331943295 Dog Library Canis lup...    46   0.23   2
(AC097796) Rattus norvegicus clone CH230-60P2, *** SEQUENCIN...    38   0.26   6
(AC027807) Homo sapiens chromosome 15, clone RP11-342A23, co...    44   0.30   7
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)...    36   0.31   17
(DQ396875) Scenedesmus obliquus strain UTEX 393 chloroplast,...    34   0.33   9
(AM471279) Vitis vinifera contig VV78X172350.2, whole genome...    46   0.42   2
(AC093786) Homo sapiens BAC clone RP11-213A7 from 4, complet...    38   0.42   8
(AM436808) Vitis vinifera, whole genome shotgun sequence, co...    36   0.44   5
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    34   0.45   14
(AC169253) Bos taurus clone CH240-259F15, WORKING DRAFT SEQU...    36   0.47   2
(AF160864) Tetrahymena pyriformis mitochondrial DNA, complet...    42   0.55   5
(CO880442) BovGen_08767 normal cattle brain Bos taurus cDNA ...    36   0.61   2
(CR759802) Zebrafish DNA sequence from clone DKEY-261L7 in l...    40   0.69   3
(AC116551) Dictyostelium discoideum chromosome 2 map complem...    34   0.71   9
(EJ463692) 1095386006885 Global-Ocean-Sampling_GS-28-01-01-1...    32   0.81   3
(AC022684) Homo sapiens, clone RP11-59H18, complete sequence.      44   0.85   6
(AC159008) Mus musculus BAC clone RP23-14E14 from chromosome...    48   0.85   1
(AC151720) Mus musculus BAC clone RP23-44P12 from 7, complet...    48   0.85   1
(AP008209) Oryza sativa (japonica cultivar-group) genomic DN...    48   0.85   1
(AC148339) Oryza sativa Japonica Group chromosome 3 clone B1...    48   0.85   1
(AC118675) Genomic sequence for Oryza sativa, Nipponbare str...    48   0.85   1
(EA694731) Sequence 73610 from patent US 7365185.                  48   0.85   1
(EA626211) Sequence 5090 from patent US 7365185.                   48   0.85   1
(AP001676) Homo sapiens genomic DNA, chromosome 21q, section...    48   0.85   1
(AP000403) Homo sapiens genomic DNA, chromosome 21q21.2, LL5...    48   0.85   1
(AC152720) Mus musculus chromosome 7 clone RP24-115J17, WORK...    48   0.85   1
(AC131225) Rattus norvegicus clone CH230-291G19, *** SEQUENC...    48   0.85   1
(AC130879) Rattus norvegicus clone CH230-99A4, *** SEQUENCIN...    48   0.85   1
(AC128097) Rattus norvegicus clone CH230-324E24, WORKING DRA...    48   0.85   1
(AC126087) Rattus norvegicus clone CH230-241D12, *** SEQUENC...    48   0.85   1
(AC110150) Rattus norvegicus clone CH230-39D11, *** SEQUENCI...    48   0.85   1
(AC105676) Rattus norvegicus clone CH230-68B19, *** SEQUENCI...    48   0.85   1
(AC096426) Rattus norvegicus clone CH230-150O23, *** SEQUENC...    48   0.85   1
(AC094604) Rattus norvegicus clone CH230-3K5, *** SEQUENCING...    48   0.85   1
(AC094526) Rattus norvegicus clone CH230-4L10, WORKING DRAFT...    48   0.85   1
(AC094463) Rattus norvegicus clone CH230-4A3, WORKING DRAFT ...    48   0.85   1
(AC079558) Mus musculus clone RP23-44P12, WORKING DRAFT SEQU...    48   0.85   1
(AC213138) Oryza glaberrima clone OG_BBa0064O15, *** SEQUENC...    48   0.85   1
(AC210450) Oryza glaberrima clone OG_BBa0013B01, *** SEQUENC...    48   0.85   1
(AM639140) Entamoeba dispar GSS, clone dispar5h05.p1k.             48   0.85   1
(EJ461784) 1093018560910 Global-Ocean-Sampling_GS-28-01-01-1...    48   0.85   1
(EJ435046) 1093015276650 Global-Ocean-Sampling_GS-28-01-01-1...    48   0.85   1
(BZ111042) CH230-208H18.TJB CHORI-230 Segment 1 Rattus norve...    48   0.85   1
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    44   0.88   10
(AC087244) Homo sapiens 12 BAC RP11-444N1 (Roswell Park Canc...    46   0.95   4
(AL445195) Human DNA sequence from clone RP11-427O13 on chro...    40   1.0    6
(EW965722) BRHL_05_C04_T7 Headlice composite library with al...    38   1.2    2
(AC128685) Homo sapiens 3 BAC RP11-535I24 (Roswell Park Canc...    44   1.2    7
(CU151885) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    42   1.3    6
(AL844509) Plasmodium falciparum chromosome 13.                    36   1.4    14
(CR392013) Zebrafish DNA sequence from clone DKEY-170H15 in ...    40   1.4    5
(AP007953) Lotus japonicus genomic DNA, chromosome 4, clone:...    32   1.4    10
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen...    32   1.5    12
(FP017278) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    40   1.5    2
(AC216417) Populus trichocarpa clone POP051-F19, complete se...    36   1.5    7
(AC141667) Apis mellifera clone CH224-54J13, WORKING DRAFT S...    40   1.7    5
(AC169534) Bos taurus Y Chr BAC CH240-237I9 (Children's Hosp...    38   1.7    6
(FP236221) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   1.7    2
(AJ831699) Zygaena minos persica mitochondrial tRNA-Leu (CUN...    34   1.9    3
(U66588) Pasteurella aerogenes RTX toxin operon: paxC, paxA,...    46   2.0    2
(DQ485322) Spiroplasma culicicola strain AEF-1 DNA gyrase su...    36   2.1    4
(CU464020) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   2.2    7
(AC018479) Drosophila melanogaster, chromosome 3R, region 87...    38   2.2    7
(DX410980) SOYFQ55TH LargeInsertSoybeanGenLibBuild4 Glycine ...    36   2.3    2
(ED653762) GM_WBa0071F17.f GM_WBa Glycine max genomic clone ...    36   2.3    2
(EI323635) GM_WBc0059P09.r GM_WBc Glycine max genomic clone ...    36   2.3    2
(AC022664) Homo sapiens clone RP11-30H24, WORKING DRAFT SEQU...    34   2.3    5
(FP102903) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    40   2.4    5
(EK261924) 1095462180062 Global-Ocean-Sampling_GS-31-01-01-1...    36   2.4    3
(AC157074) Bos taurus clone CH240-62M18, WORKING DRAFT SEQUE...    42   2.4    6
(AU038565) Dictyostelium discoideum slug cDNA, clone SSH874.       38   2.7    2
(AZ682308) ENTHI58TFB Entamoeba histolytica Sheared DNA Enta...    34   2.8    3
(AX347077) Sequence 2148 from Patent WO0200928.                    32   2.8    9
(AM447853) Vitis vinifera contig VV78X083454.9, whole genome...    38   2.9    5
(CP000015) Borrelia garinii PBi plasmid lp54, complete seque...    36   2.9    5
(AC231787) Oryza minuta clone OM__Ba0233O07, *** SEQUENCING ...    42   2.9    7
(ER403441) 1095353002295 Global-Ocean-Sampling_GS-34-01-01-1...    38   3.1    2
(FD769668) Zfi02b_68_B09_C017.g1 cDNA library derived from f...    38   3.1    2
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699...    34   3.2    17
(EY318699) CAWX6514.rev CAWX Helobdella robusta Primary Earl...    38   3.2    2
(BX927365) Zebrafish DNA sequence from clone DKEY-161P7 in l...    32   3.3    10
(AC230621) Bos taurus clone CH240-503D13, WORKING DRAFT SEQU...    32   3.3    9
(ET646438) JBVRB26TR JBVR Allium cepa genomic clone JBVR8_R9...    40   3.4    3
(BV435489) S237P6437RC10.T0 PortugueseWaterDog Canis familia...    46   3.4    1
(AL672179) Mouse DNA sequence from clone RP23-468C6 on chrom...    46   3.4    1
(AM443306) Vitis vinifera contig VV78X070998.6, whole genome...    46   3.4    1
(AC214595) Populus trichocarpa clone POP016-E18, complete se...    46   3.4    1
(EF383193) Elmantis trincomaliae isolate MN071 12S ribosomal...    46   3.4    1
(AP003484) Homo sapiens genomic DNA, chromosome 11q, clone:R...    46   3.4    1
(AP001464) Homo sapiens genomic DNA, chromosome 21q11.1, clo...    46   3.4    1
(AL163202) Homo sapiens chromosome 21 segment HS21C002.            46   3.4    1
(AC206358) Homo sapiens FOSMID clone ABC10-44660000D15 from ...    46   3.4    1
(AC162580) Bos taurus clone CH240-111D18, WORKING DRAFT SEQU...    46   3.4    1
(AC055846) Homo sapiens chromosome 18 clone RP11-723L3 map 1...    46   3.4    1
(AC040925) Homo sapiens chromosome 11 clone RP11-734C14 map ...    46   3.4    1
(AC221758) Bos taurus clone CH240-386G19, WORKING DRAFT SEQU...    46   3.4    1
(AC220715) Bos taurus clone CH240-348O14, WORKING DRAFT SEQU...    46   3.4    1
(AC209873) Zea mays chromosome 1 clone CH201-179P10; ZMMBBc0...    46   3.4    1
(AC016294) Homo sapiens clone RP11-22K7, WORKING DRAFT SEQUE...    46   3.4    1
(AZ534581) ENTBM76TR Entamoeba histolytica Sheared DNA Entam...    46   3.4    1
(FH459228) CHO_OF4929xb08r1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   3.4    1
(EK587732) 1095522168719 Global-Ocean-Sampling_GS-32-01-01-1...    46   3.4    1
(EK283802) 1095462305265 Global-Ocean-Sampling_GS-31-01-01-1...    46   3.4    1
(EK100149) 1092963010540 Global-Ocean-Sampling_GS-31-01-01-1...    46   3.4    1
(EK092730) 1092962015564 Global-Ocean-Sampling_GS-31-01-01-1...    46   3.4    1
(EB265440) MCCN20-F-132520-501 Normalized MCC Neurons Aplysi...    46   3.4    1
(DB747507) Apis mellifera head cDNA, RIKEN full-length enric...    46   3.4    1
(DB740994) Apis mellifera head cDNA, RIKEN full-length enric...    46   3.4    1
(CP000673) Clostridium kluyveri DSM 555, complete genome.          46   3.4    1
(CP000563) Shewanella baltica OS155, complete genome.              46   3.4    1
(AP009049) Clostridium kluyveri NBRC 12016 DNA, complete gen...    46   3.4    1
(ER569941) 1093015788138 Global-Ocean-Sampling_GS-36-01-01-2...    36   3.4    2
(EJ671943) 1092955062552 Global-Ocean-Sampling_GS-30-02-01-1...    44   3.6    2
(AL513529) Human DNA sequence *** SEQUENCING CANCELLED *** f...    40   3.7    7
(BX942817) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    32   3.7    10
(AB302552) Carabus dehaanii mitochondrial ND5 gene for NADH ...    34   3.7    4
(AB302551) Carabus dehaanii mitochondrial ND5 gene for NADH ...    34   3.7    4
(AB302550) Carabus dehaanii mitochondrial ND5 gene for NADH ...    34   3.7    4
(AB302541) Carabus dehaanii mitochondrial ND5 gene for NADH ...    34   3.7    4
(AB302522) Carabus dehaanii mitochondrial ND5 gene for NADH ...    34   3.7    4
(AB302516) Carabus dehaanii mitochondrial ND5 gene for NADH ...    34   3.7    4
(CT030047) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    32   3.8    7
(FH996773) CHO_OF6882xn18r1.ab1 CHO_OF6 Nicotiana tabacum ge...    36   3.8    2
(EA083192) Sequence 5452 from patent US 7186513.                   34   3.9    3
(AR675951) Sequence 5452 from patent US 6902887.                   34   3.9    3
(EJ656873) 1092955009197 Global-Ocean-Sampling_GS-30-02-01-1...    44   3.9    2
(AX345288) Sequence 359 from Patent WO0200928.                     36   4.1    4
(BX942841) Zebrafish DNA sequence from clone CH211-59D15 in ...    36   4.2    7
(EK526416) 1095515644330 Global-Ocean-Sampling_GS-32-01-01-1...    44   4.3    2
(FB571325) Sequence 192 from Patent EP1865317.                     34   4.3    7
(AC092755) Homo sapiens chromosome 15 clone RP11-361D15 map ...    40   4.4    5
(AC179406) Strongylocentrotus purpuratus clone R3-60P19, WOR...    42   4.7    7
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ...    38   4.8    6
(AF303741) Chilo iridescent virus complete genome.                 32   4.8    12
(AC113343) Homo sapiens chromosome 5 clone CTD-2381B20, WORK...    42   5.1    5
(CP000883) Hemiselmis andersenii chromosome 3, complete sequ...    32   5.2    10
(EU877954) Trachypachus holmbergi mitochondrion, complete ge...    34   5.2    5
(CP000361) Arcobacter butzleri RM4018, complete genome.            32   5.2    2
(GC700638) Sequence 15883 from patent US 6812339.                  40   5.4    2
(GC697134) Sequence 12379 from patent US 6812339.                  40   5.4    2
(AC026623) Homo sapiens chromosome 10 clone RP11-632M22 map ...    38   5.5    9
(AX344816) Sequence 241 from Patent WO0200927.                     34   5.6    4
(AC093820) Homo sapiens BAC clone RP11-373J7 from 4, complet...    36   5.7    6
(AC007833) Homo sapiens clone RP11-33A7, WORKING DRAFT SEQUE...    34   5.8    8
(AC225020) Solanum lycopersicum chromosome 1 clone C01HBa006...    42   5.9    6
(FI353212) CH321-48F09.x CHORI-321 Drosophila melanogaster g...    36   6.0    3
(DR394174) USDA-FP_154108 Adult Alate Aphis gossypii (WHAGA)...    42   6.0    2
(AC107331) Rattus norvegicus clone CH230-194K9, WORKING DRAF...    34   6.0    9
(GC699984) Sequence 15229 from patent US 6812339.                  40   6.2    2
(AC156073) Bos taurus clone CH240-51L2, WORKING DRAFT SEQUEN...    32   6.2    2
(BZ579022) msh2_6128.x1 msh Pseudomonas aeruginosa genomic c...    32   6.2    3
(AC104640) Homo sapiens 3 BAC RP11-809F4 (Roswell Park Cance...    32   6.3    2
(AL844506) Plasmodium falciparum chromosome  7.                    34   6.3    14
(AC068566) Homo sapiens chromosome 3 clone RP11-809F4 map 3,...    32   6.3    2
(AC186954) Musa acuminata clone MA4_111B14, *** SEQUENCING I...    34   6.3    2
(GC700828) Sequence 16073 from patent US 6812339.                  40   6.4    9
(AE017308) Mycoplasma mobile 163K complete genome.                 32   6.8    18
(AC087887) Homo sapiens 12 BAC RP11-27M21 (Roswell Park Canc...    36   6.8    5
(AC215834) Populus trichocarpa clone ACSB1509-P19, complete ...    34   6.9    2
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen...    36   7.0    19
(AL158038) Human DNA sequence from clone RP11-298H15 on chro...    32   7.1    9
(FJ171325) Polystoechotes punctatus mitochondrion, complete ...    32   7.1    6
(AC024909) Homo sapiens 12 BAC RP11-823E8 (Roswell Park Canc...    38   7.2    7
(CP001161) Buchnera aphidicola str. 5A (Acyrthosiphon pisum)...    34   7.4    14
(EK365332) 1095469394979 Global-Ocean-Sampling_GS-31-01-01-1...    36   7.4    3
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    36   7.8    13
(CU019606) M.truncatula DNA sequence from clone MTH2-77H1 on...    38   8.0    7
(EE145377) SiJWG09CAI2 Lausanne fire ant library Solenopsis ...    40   8.0    2
(EV231455) VV_PEa21a08.g1 Vitis vinifera cv. perlette LibA V...    34   8.2    2
(AJ297974) Antirrhinum hispanicum mRNA for S locus F-box (SL...    40   8.2    2
(BH677985) BOMJZ90TR BO_2_3_KB Brassica oleracea genomic clo...    32   8.3    2
(FH895654) CHO_ONF038xi11f1.ab1 CHO_ONF Nicotiana tabacum ge...    32   8.4    2
(ER576484) 1093015813907 Global-Ocean-Sampling_GS-36-01-01-2...    34   8.4    2
(GO176986) CAGA5058.rev CAGA Alvinella pompejana Normalized ...    34   8.5    2
(GO164477) CAGA4099.rev CAGA Alvinella pompejana Normalized ...    34   8.5    2
(GO178454) CAGA5740.rev CAGA Alvinella pompejana Normalized ...    34   8.5    2
(GO123856) CAGA21154.rev CAGA Alvinella pompejana Normalized...    34   8.5    2
(GO177199) CAGA5157.rev CAGA Alvinella pompejana Normalized ...    34   8.5    2
(GO152168) CAGA35187.rev CAGA Alvinella pompejana Normalized...    34   8.5    2
(DR395911) USDA-FP_155846 Adult Alate Aphis gossypii (WHAGA)...    42   8.5    2
(CU855975) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   8.5    6
(GO123148) CAGA20820.rev CAGA Alvinella pompejana Normalized...    34   8.6    2
(CA061536) ssalrga516339 mixed_tissue Salmo salar cDNA, mRNA...    34   8.6    2
(EK097547) 1092962047569 Global-Ocean-Sampling_GS-31-01-01-1...    34   8.6    3
(GO178414) CAGA5721.rev CAGA Alvinella pompejana Normalized ...    34   8.7    2
(AZ148306) SP_0022_B1_F07_SP6E Strongylocentrotus purpuratus...    32   8.7    2
(GO098856) CAFZ2363.rev CAFZ Alvinella pompejana Incyte regu...    34   8.8    2
(AX345579) Sequence 650 from Patent WO0200928.                     36   8.9    4
(CR933791) Zebrafish DNA sequence from clone DKEYP-101F6 in ...    42   9.1    2
(AC158172) Medicago truncatula chromosome 6 clone mth2-143b6...    38   9.4    7
(DD391900) Method and nucleic acids for the improved treatme...    32   9.4    5
(DD209257) test.                                                   32   9.4    5
(CQ807156) Sequence 606 from Patent WO2004035803.                  32   9.4    5
(AX826094) Sequence 346 from Patent WO03072821.                    32   9.4    5
(AX822454) Sequence 346 from Patent EP1340818.                     32   9.4    5
(AX795934) Sequence 277 from Patent WO03052135.                    32   9.4    5
(AX767548) Sequence 196 from Patent WO03044226.                    32   9.4    5
(AC107465) Rattus norvegicus clone CH230-86H10, *** SEQUENCI...    40   9.4    7
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975...    32   9.5    9
(DR396350) USDA-FP_156288 Adult Alate Aphis gossypii (WHAGA)...    42   9.6    2
(EA724658) Sequence 103537 from patent US 7365185.                 34   9.6    3
(BX538351) Cryptosporidium parvum chromosome 6, complete seq...    36   9.7    11
(AC025893) Homo sapiens chromosome 13 clone RP11-610H17 map ...    38   9.8    7
(DR390836) USDA-FP_150768 Adult Alate Aphis gossypii (WHAGA)...    42   10.0   2

>(C25560) Dictyostelium discoideum slug cDNA, clone SLA410.
          Length = 699

 Score = 1384 bits (698), Expect = 0.0
 Identities = 698/698 (100%)
 Strand = Plus / Plus


Query: 595  actactcgctatcaacggcccaaagtttggtttggtgaatttatatttcaatagttttct 654
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    actactcgctatcaacggcccaaagtttggtttggtgaatttatatttcaatagttttct 60


Query: 655  taaaaagtattcaaacaattcagaaatatcagcgtcagatacagtttatgcagtgaccgc 714
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   taaaaagtattcaaacaattcagaaatatcagcgtcagatacagtttatgcagtgaccgc 120


Query: 715  gttaatggagtctgataatttagaatcggatcaatcggatcaagacatttgggaacaaaa 774
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gttaatggagtctgataatttagaatcggatcaatcggatcaagacatttgggaacaaaa 180


Query: 775  tttttgggaagcttatgactcaatctcaaataaaaatattgatctattaaagattggttt 834
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tttttgggaagcttatgactcaatctcaaataaaaatattgatctattaaagattggttt 240


Query: 835  aaaacaatcgattcaattacaaaaggaaatcactcgtcaagtaacttcaatgattgaaaa 894
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  aaaacaatcgattcaattacaaaaggaaatcactcgtcaagtaacttcaatgattgaaaa 300


Query: 895  acgtagtgttatcttgtctggtccattcagatatgcattcatcacagaatcttcagattt 954
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  acgtagtgttatcttgtctggtccattcagatatgcattcatcacagaatcttcagattt 360


Query: 955  aaaatatttcattcatccattggcactaactaaattaggtttattcatgatggatgcttt 1014
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  aaaatatttcattcatccattggcactaactaaattaggtttattcatgatggatgcttt 420


Query: 1015 catttcaatgggtaaagctaaaagacctttcttaattggtgctttaaatgaaaataaaaa 1074
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  catttcaatgggtaaagctaaaagacctttcttaattggtgctttaaatgaaaataaaaa 480


Query: 1075 ttcttatttaattgttggtatttctggttcacatagtactgatattcaatcaaatacatt 1134
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  ttcttatttaattgttggtatttctggttcacatagtactgatattcaatcaaatacatt 540


Query: 1135 tggtgaatattttagaaaatcagctgaatatacagatgcaacatttaaatatcaatcatt 1194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  tggtgaatattttagaaaatcagctgaatatacagatgcaacatttaaatatcaatcatt 600


Query: 1195 tgatacatcaattgttgaagtttcaaaaacagatttacataaatttgtagaacatcttca 1254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tgatacatcaattgttgaagtttcaaaaacagatttacataaatttgtagaacatcttca 660


Query: 1255 tggtacaatgcaaacaactcaaatttctaaataaaaat 1292
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 661  tggtacaatgcaaacaactcaaatttctaaataaaaat 698

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,695,158,342
Number of extensions: 110751687
Number of successful extensions: 9631255
Number of sequences better than 10.0: 228
Length of query: 1292
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1268
Effective length of database: 99,340,224,878
Effective search space: 125963405145304
Effective search space used: 125963405145304
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U03569-1 (Contig-U03569-1Q) /CSM_Contig/Contig-U03569-1Q.Seq.d
         (1292 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE017345_158(AE017345|pid:none) Cryptococcus neoformans var. neo...   219   2e-55
(O74113) RecName: Full=Cell division control protein 45 homolog;...   216   2e-54
BC121628_1(BC121628|pid:none) Xenopus tropicalis CDC45-like, mRN...   213   2e-53
(Q9YHZ6) RecName: Full=CDC45-related protein;  &AF062494_1(AF062...   211   4e-53
AM442840_1(AM442840|pid:none) Vitis vinifera contig VV78X013464....   209   2e-52
BC073697_1(BC073697|pid:none) Xenopus laevis Cdc45, mRNA (cDNA c...   208   4e-52
BT045389_1(BT045389|pid:none) Salmo salar clone ssal-rgf-520-024...   207   7e-52
BC154772_1(BC154772|pid:none) Danio rerio cell division cycle 45...   207   7e-52
CP000584_450(CP000584|pid:none) Ostreococcus lucimarinus CCE9901...   207   9e-52
BC077621_1(BC077621|pid:none) Xenopus laevis CDC45 cell division...   206   1e-51
BT065972_1(BT065972|pid:none) Zea mays full-length cDNA clone ZM...   202   3e-50
CR954204_486(CR954204|pid:none) Ostreococcus tauri strain OTTH05...   196   2e-48
(Q9Z1X9) RecName: Full=CDC45-related protein; AltName: Full=PORC...   188   4e-46
AF098068_1(AF098068|pid:none) Mus musculus CDC45-related protein...   188   4e-46
BC161946_1(BC161946|pid:none) Rattus norvegicus CDC45 cell divis...   187   7e-46
AF062495_1(AF062495|pid:none) Homo sapiens Cdc45 mRNA, complete ...   187   9e-46
(O75419) RecName: Full=CDC45-related protein;          Short=Cdc...   187   9e-46
AY358971_1(AY358971|pid:none) Homo sapiens clone DNA44161 CDC45L...   187   9e-46
CP001330_117(CP001330|pid:none) Micromonas sp. RCC299 chromosome...   187   9e-46
AJ223728_1(AJ223728|pid:none) Homo sapiens mRNA for CDC45 like p...   187   9e-46
AY892334_1(AY892334|pid:none) Synthetic construct Homo sapiens c...   187   9e-46
AK167850_1(AK167850|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK...   186   2e-45
AK293338_1(AK293338|pid:none) Homo sapiens cDNA FLJ60098 complet...   185   3e-45
BC123732_1(BC123732|pid:none) Bos taurus CDC45 cell division cyc...   178   3e-43
BT020809_1(BT020809|pid:none) Bos taurus CDC45 cell division cyc...   167   8e-40
CU928176_271(CU928176|pid:none) Zygosaccharomyces rouxii strain ...   166   1e-39
AB280024_1(AB280024|pid:none) Molgula tectiformis Mt-cdc45 mRNA ...   159   3e-37
CR380959_503(CR380959|pid:none) Candida glabrata strain CBS138 c...   154   9e-36
CR382137_867(CR382137|pid:none) Debaryomyces hansenii strain CBS...   151   6e-35
AE016820_439(AE016820|pid:none) Ashbya gossypii (= Eremothecium ...   150   1e-34
(Q08032) RecName: Full=Cell division control protein 45;  &S6493...   150   1e-34
CR382126_855(CR382126|pid:none) Kluyveromyces lactis strain NRRL...   150   1e-34
CU928171_541(CU928171|pid:none) Kluyveromyces thermotolerans str...   147   8e-34
CP000497_641(CP000497|pid:none) Pichia stipitis CBS 6054 chromos...   147   8e-34
BX908809_37(BX908809|pid:none) Neurospora crassa DNA linkage gro...   141   6e-32
AM269988_9(AM269988|pid:none) Aspergillus niger contig An01c0420...   130   1e-28
CU638743_174(CU638743|pid:none) Podospora anserina genomic DNA c...   117   1e-24
FN357412_23(FN357412|pid:none) Schistosoma mansoni genome sequen...   117   1e-24
AP007151_1014(AP007151|pid:none) Aspergillus oryzae RIB40 genomi...   116   2e-24
(Q99107) RecName: Full=Protein TSD2;  &U50276_1(U50276|pid:none)       89   3e-16
AF081539_1(AF081539|pid:none) Mus musculus macrophage CDC45L (Cd...    84   9e-15
FM992695_683(FM992695|pid:none) Candida dubliniensis CD36 chromo...    75   4e-12
CP000881_113(CP000881|pid:none) Hemiselmis andersenii chromosome...    66   2e-09
Z34799_2(Z34799|pid:none) Caenorhabditis elegans Cosmid F34D10, ...    65   4e-09
T19275(T19275;T21723)hypothetical protein F34D10.2 - Caenorhabdi...    62   6e-08
A90551(A90551) conserved hypothetical protein MYPU_3130 [importe...    37   2.0
CP000685_2915(CP000685|pid:none) Flavobacterium johnsoniae UW101...    37   2.0
CR382400_30(CR382400|pid:none) Plasmodium falciparum chromosome ...    35   4.6
BX908798_1009(BX908798|pid:none) Parachlamydia-related symbiont ...    35   6.0
AB210574_1(AB210574|pid:none) Ciona intestinalis mRNA for NFkB p...    35   6.0
AP007157_313(AP007157|pid:none) Aspergillus oryzae RIB40 genomic...    35   6.0

>AE017345_158(AE017345|pid:none) Cryptococcus neoformans var.
            neoformans JEC21 chromosome 5, complete sequence.
          Length = 701

 Score =  219 bits (558), Expect = 2e-55
 Identities = 143/463 (30%), Positives = 235/463 (50%), Gaps = 67/463 (14%)
 Frame = +2

Query: 68   TYYGKSAAVSMYSLSTFLNKQNLDDLLWYAVLGLTDQFIHEKITLDSYEQQYKNF-KELI 244
            TYYG+S A+++Y L+T L + + +D+LWY++LG+T Q+I   I  + YE+ +  F  E++
Sbjct: 262  TYYGQSVALTIYLLATVLERAD-NDILWYSILGVTHQYITSHIDREKYEEYHAIFLDEVV 320

Query: 245  LNNYPTDGDDDQEERYRPXXXXXXXXXXXXLKRHPSSMFLHGDKIIPSDDFRFMLYRHWN 424
              N+  D                         R P+        I  S++ RFML+RHW+
Sbjct: 321  RLNHEPD---------------------PVALRTPNP---DNRNISKSEELRFMLFRHWD 356

Query: 425  LYESLFNSRYVACKLRVWKAKGRFQLESLFAMMGIPLDQVKQKYNSMNVHYKKQLKQLLA 604
            LY ++ +S YVA +L +WK KGR +L  L A MG  + Q  Q ++ M++  K+QL ++L
Sbjct: 357  LYNAMLHSGYVAGRLGIWKEKGRSKLRGLLAKMGYSIQQCNQAWSHMDMELKRQLPEVLE 416

Query: 605  INGPKFGLVNLYFNSFLKKYSNN-SEISASDTVYAVTALME------------------- 724
              GP++GLV L + SF + Y    S +SA+D V  +++L++
Sbjct: 417  RVGPEYGLVELSYPSFTRAYGFQLSSLSAADAVEVISSLLDIAVGVRLEVDREGGKGGGE 476

Query: 725  ---------------------------SDNLESDQS----DQDIWEQNFWEAYDSISNKN 811
                                       ++ +E ++S    DQD    NFW AYD+  +
Sbjct: 477  WFGGTTRWSVGTREAEMGIAASEPGERAEGIEGEESEEKKDQDWHVTNFWIAYDACDD-- 534

Query: 812  IDLLKIGLKQSIQLQKEITRQVTSMIEKRSVILSGPFRYAFITESSDLKYFIHPLALTKL 991
            I LL+  L  ++ L + I R  + +++K  +     FR   ++E  DL+ F HP  L++L
Sbjct: 535  ISLLRRSLPLAMALHRAIIRAGSDLLDKSIIRTLRNFRLTILSEGPDLRLFCHPSPLSRL 594

Query: 992  GLFMMDAFI-------------SMGKAKR-PFLIGALNENKNSYLIVGISGSHST-DIQS 1126
             L+++DA               S GK K  PF++  LNE K ++ +VG++G+    D++
Sbjct: 595  ALWLVDATRDRWVEKIARQNAHSGGKVKSLPFVVACLNEEKGTFSVVGVTGAPEFGDVRK 654

Query: 1127 NTFGEYFRKSAEYTDATFKYQSFDTSIVEVSKTDLHKFVEHLH 1255
            N FG  F+++A +++AT     FDTS+VEV + DL  F+EHLH
Sbjct: 655  NKFGLAFQQAASFSNATASLDMFDTSVVEVGREDLQSFIEHLH 697

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,885,553,057
Number of extensions: 36157489
Number of successful extensions: 108442
Number of sequences better than 10.0: 51
Number of HSP's gapped: 108257
Number of HSP's successfully gapped: 74
Length of query: 430
Length of database: 1,061,185,681
Length adjustment: 131
Effective length of query: 299
Effective length of database: 633,018,993
Effective search space: 189272678907
Effective search space used: 189272678907
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.13  gvh: 0.48  alm: 0.37  top: 0.53  tms: 0.00  mit: 0.33  mip: 0.03
 nuc: 0.32  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 76.0 %: nuclear
	 16.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial

>> prediction for Contig-U03569-1 is nuc