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Dicty_cDB
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U03566-1
Contig ID Contig-U03566-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U03566-1 (Contig-U03566-1Q) /CSM_Contig/Contig-U03566-1Q.Seq.d
AATCCACACCAACCCAACAACCAACATCAACTTATAAAATGTTTGAAGCC
CGTTTATTACAAGCATCACTTCTTAAGAAGATTTTAGAAAGTATCAAAGA
TTTAGTAGAGTCAGCCAACTTTGATTGTAGTCCAGAAGATATCTCATTAC
AAGCTATGGATGGTACTCATGTCACTTTAATCAATTTAGTTTTACGTAAT
GAAGGTTTTGAAACTTACAACTGTGACAGATCATTATCCCTCGGTTTAAG
TCTAGTTTCACTCTCAAAGATTCTCAAATGTGCTGGTAATGATGATACCC
TCACCATTAGAGCTCGTGATAATGAATCTGATACCGTTACTTTTGTTTTC
GAATCACCAAAGAATGATAGAGTTAGTGATTTTGAAATTAAATTAATCGA
TATTAAGAATGAACAATATAGTATCCGTAAATCAGATTACTCTGCAGTTA
TTAAGATGCCATCAGCTGAACTCCAAAGAATTTGTAGAGATCTCTCCATC
ATTGGTGAAATTGTTACCATTAGTGCCAATAAAGAAGGTGTTAAATTCTC
TGTTTCAGGTGATTCAGGTTCTGGTAACATTACCATTAAACCAACCTCTG
ACTCTGATGTCCCAGCCGAACAAGCTACCGTCATTGAATCAAAAGAACCA
GTCGTCCTTAACTTTGCCTTAAAATTCCTTTCAAACTTTACCAAAGCTAC
TCCACTCTCACCAATGGTTACTCTTTCAATGTCTGAAGGTATCCCAGTTG
TTGTTGAATACAAAATAGACGATTTAGGCTTTTTAGGATTCTTCCTTGCA
CCTAAAATTGAATAAGTTTGGCCAGAATTAGTCAAAAAGCCCAAAAAATC
GAGTAAAAGTGGTCAAAATTGGTTAAAAATTAAAAAATTGAATTTATTTG
TAAAGAAGGTATACTTTTTGTAGAAGTTTATTAATTAAATAGTAAAAACA
AATAAATTTTTATGTATATGTAA
Gap no gap
Contig length 973
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 461958
End point 460985
Strand (PLUS/MINUS) MINUS
Number of clones 3
Number of EST 3
Link to clone list U03566
List of clone(s) 

est1=SFF767E,1,860
est2=VSH679E,80,964
est3=SLA672E,548,974
Translated Amino Acid sequence 
STPTQQPTSTYKMFEARLLQASLLKKILESIKDLVESANFDCSPEDISLQAMDGTHVTLI
NLVLRNEGFETYNCDRSLSLGLSLVSLSKILKCAGNDDTLTIRARDNESDTVTFVFESPK
NDRVSDFEIKLIDIKNEQYSIRKSDYSAVIKMPSAELQRICRDLSIIGEIVTISANKEGV
KFSVSGDSGSGNITIKPTSDSDVPAEQATVIESKEPVVLNFALKFLSNFTKATPLSPMVT
LSMSEGIPVVVEYKIDDLGFLGFFLAPKIE*vwpelvkkpkkssksgqnwlkikklnlfv
kkvyfl*kfin*ivktnkflcic
Translated Amino Acid sequence (All Frames) 
Frame A:
nphqpnnqhqlikclkpvyykhhflrrf*kvski**sqptlivvqkishyklwmvlmsl*
si*fyvmkvlklttvtdhypsv*v*fhsqrfsnvlvmmipsplelvimnliplllfsnhq
rmielvilkln*silrmnnivsvnqitlqllrchqlnskefveispslvkllplvpikkv
lnslfqviqvlvtlplnqpltlmsqpnklpslnqknqssltlp*nsfqtlpkllhshqwl
lfqclkvsqlllntk*ti*af*dsslhlklnkfgqn*skspknrvkvvkig*klkn*iyl
*rrytfcrsllik**kqinfyvyv


Frame B:
ihtnpttninl*nv*spfitsits*edfrkyqrfsrvsql*l*srrylitsygwyschfn
qfsft**rf*nlql*qiiiprfkssftlkdsqmcw***yphh*ss***i*yryfcfritk
e**s**f*n*inry*e*ti*yp*irllcsy*dais*tpknl*rslhhw*ncyh*cq*rrc
*ilcfr*frfw*hyh*tnl*l*cpsrtsyrh*ikrtsrp*lclkipfklyqsystltngy
sfnv*rypscc*iqnrrfrlfrilpct*n*islarisqkaqkie*kwsklvkn*kiefic
kegilfvevy*lnsknk*ifmym*


Frame C:
STPTQQPTSTYKMFEARLLQASLLKKILESIKDLVESANFDCSPEDISLQAMDGTHVTLI
NLVLRNEGFETYNCDRSLSLGLSLVSLSKILKCAGNDDTLTIRARDNESDTVTFVFESPK
NDRVSDFEIKLIDIKNEQYSIRKSDYSAVIKMPSAELQRICRDLSIIGEIVTISANKEGV
KFSVSGDSGSGNITIKPTSDSDVPAEQATVIESKEPVVLNFALKFLSNFTKATPLSPMVT
LSMSEGIPVVVEYKIDDLGFLGFFLAPKIE*vwpelvkkpkkssksgqnwlkikklnlfv
kkvyfl*kfin*ivktnkflcic
own update 2004. 6. 9
Homology vs CSM-cDNA 
Query= Contig-U03566-1 (Contig-U03566-1Q)
/CSM_Contig/Contig-U03566-1Q.Seq.d
         (973 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U03566-1 (Contig-U03566-1Q) /CSM_Contig/Conti...  1649  0.0
Contig-U04958-1 (Contig-U04958-1Q) /CSM_Contig/Conti...    38  0.017
Contig-U13954-1 (Contig-U13954-1Q) /CSM_Contig/Conti...    36  0.069
Contig-U12868-1 (Contig-U12868-1Q) /CSM_Contig/Conti...    36  0.069
Contig-U09163-1 (Contig-U09163-1Q) /CSM_Contig/Conti...    36  0.069
Contig-U05441-1 (Contig-U05441-1Q) /CSM_Contig/Conti...    36  0.069
Contig-U14571-1 (Contig-U14571-1Q) /CSM_Contig/Conti...    34  0.27
Contig-U14378-1 (Contig-U14378-1Q) /CSM_Contig/Conti...    34  0.27
Contig-U13399-1 (Contig-U13399-1Q) /CSM_Contig/Conti...    34  0.27
Contig-U12406-1 (Contig-U12406-1Q) /CSM_Contig/Conti...    34  0.27

>Contig-U03566-1 (Contig-U03566-1Q) /CSM_Contig/Contig-U03566-1Q.Seq.d
          Length = 973

 Score = 1649 bits (832), Expect = 0.0
 Identities = 832/832 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatccacaccaacccaacaaccaacatcaacttataaaatgtttgaagcccgtttattac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aatccacaccaacccaacaaccaacatcaacttataaaatgtttgaagcccgtttattac 60

                                                                       
Query: 61  aagcatcacttcttaagaagattttagaaagtatcaaagatttagtagagtcagccaact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aagcatcacttcttaagaagattttagaaagtatcaaagatttagtagagtcagccaact 120

                                                                       
Query: 121 ttgattgtagtccagaagatatctcattacaagctatggatggtactcatgtcactttaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgattgtagtccagaagatatctcattacaagctatggatggtactcatgtcactttaa 180

                                                                       
Query: 181 tcaatttagttttacgtaatgaaggttttgaaacttacaactgtgacagatcattatccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaatttagttttacgtaatgaaggttttgaaacttacaactgtgacagatcattatccc 240

                                                                       
Query: 241 tcggtttaagtctagtttcactctcaaagattctcaaatgtgctggtaatgatgataccc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcggtttaagtctagtttcactctcaaagattctcaaatgtgctggtaatgatgataccc 300

                                                                       
Query: 301 tcaccattagagctcgtgataatgaatctgataccgttacttttgttttcgaatcaccaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcaccattagagctcgtgataatgaatctgataccgttacttttgttttcgaatcaccaa 360

                                                                       
Query: 361 agaatgatagagttagtgattttgaaattaaattaatcgatattaagaatgaacaatata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agaatgatagagttagtgattttgaaattaaattaatcgatattaagaatgaacaatata 420

                                                                       
Query: 421 gtatccgtaaatcagattactctgcagttattaagatgccatcagctgaactccaaagaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtatccgtaaatcagattactctgcagttattaagatgccatcagctgaactccaaagaa 480

                                                                       
Query: 481 tttgtagagatctctccatcattggtgaaattgttaccattagtgccaataaagaaggtg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttgtagagatctctccatcattggtgaaattgttaccattagtgccaataaagaaggtg 540

                                                                       
Query: 541 ttaaattctctgtttcaggtgattcaggttctggtaacattaccattaaaccaacctctg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttaaattctctgtttcaggtgattcaggttctggtaacattaccattaaaccaacctctg 600

                                                                       
Query: 601 actctgatgtcccagccgaacaagctaccgtcattgaatcaaaagaaccagtcgtcctta 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 actctgatgtcccagccgaacaagctaccgtcattgaatcaaaagaaccagtcgtcctta 660

                                                                       
Query: 661 actttgccttaaaattcctttcaaactttaccaaagctactccactctcaccaatggtta 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 actttgccttaaaattcctttcaaactttaccaaagctactccactctcaccaatggtta 720

                                                                       
Query: 721 ctctttcaatgtctgaaggtatcccagttgttgttgaatacaaaatagacgatttaggct 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctctttcaatgtctgaaggtatcccagttgttgttgaatacaaaatagacgatttaggct 780

                                                               
Query: 781 ttttaggattcttccttgcacctaaaattgaataagtttggccagaattagt 832
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttttaggattcttccttgcacctaaaattgaataagtttggccagaattagt 832


 Score =  170 bits (86), Expect = 2e-42
 Identities = 86/86 (100%)
 Strand = Plus / Plus

                                                                       
Query: 888 ttgaatttatttgtaaagaaggtatactttttgtagaagtttattaattaaatagtaaaa 947
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 ttgaatttatttgtaaagaaggtatactttttgtagaagtttattaattaaatagtaaaa 947

                                     
Query: 948 acaaataaatttttatgtatatgtaa 973
           ||||||||||||||||||||||||||
Sbjct: 948 acaaataaatttttatgtatatgtaa 973


>Contig-U04958-1 (Contig-U04958-1Q) /CSM_Contig/Contig-U04958-1Q.Seq.d
          Length = 474

 Score = 38.2 bits (19), Expect = 0.017
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 943 taaaaacaaataaattttt 961
           |||||||||||||||||||
Sbjct: 377 taaaaacaaataaattttt 395


>Contig-U13954-1 (Contig-U13954-1Q) /CSM_Contig/Contig-U13954-1Q.Seq.d
          Length = 1263

 Score = 36.2 bits (18), Expect = 0.069
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 938  aatagtaaaaacaaataaattt 959
            |||| |||||||||||||||||
Sbjct: 1215 aataataaaaacaaataaattt 1236


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,627
Number of Sequences: 6905
Number of extensions: 11627
Number of successful extensions: 1333
Number of sequences better than 10.0: 152
length of query: 973
length of database: 5,674,871
effective HSP length: 16
effective length of query: 957
effective length of database: 5,564,391
effective search space: 5325122187
effective search space used: 5325122187
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 6. 3
Homology vs DNA 
Query= Contig-U03566-1 (Contig-U03566-1Q) /CSM_Contig/Contig-U03566-1Q.Seq.d
         (973 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ398471) Dictyostelium discoideum cDNA clone:dds12f17, 3' ...  1080   0.0    1
(AU267816) Dictyostelium discoideum vegetative cDNA clone:VS...  1027   0.0    3
(BJ387151) Dictyostelium discoideum cDNA clone:dds12f17, 5' ...  1057   0.0    1
(AU267815) Dictyostelium discoideum vegetative cDNA clone:VS...   846   0.0    1
(AU033366) Dictyostelium discoideum slug cDNA, clone SLA672.      567   0.0    2
(Y18135) Nicotiana tabacum mRNA for PCNA1 protein.                 46   4e-05  3
(AB008186) Pisum sativum mRNA for proliferating cell nuclear...    46   4e-05  3
(Y16796) Pisum sativum mRNA for proliferating cell nuclear a...    46   5e-05  3
(BC080365) Xenopus tropicalis pcna protein, mRNA (cDNA clone...    44   0.002  2
(DR878602) JGI_CABI1804.fwd NIH_XGC_tropOvi1 Xenopus (Silura...    44   0.002  2
(DN089707) JGI_CABE2957.fwd NIH_XGC_tropOva1 Xenopus (Silura...    44   0.002  2
(BX754857) Xenopus tropicalis EST, clone TGas105a07 3'.            44   0.002  2
(BX757939) Xenopus tropicalis EST, clone TGas142h22 3'.            44   0.002  2
(CX468420) JGI_XZG3214.fwd NIH_XGC_tropGas7 Xenopus (Siluran...    44   0.002  2
(DN086437) JGI_CABE1229.fwd NIH_XGC_tropOva1 Xenopus (Silura...    44   0.002  2
(CX474289) JGI_XZG49282.fwd NIH_XGC_tropGas7 Xenopus (Silura...    44   0.002  2
(DT531891) JGI_CABH4141.rev NIH_XGC_tropSkeMus1 Xenopus (Sil...    44   0.002  2
(BX693423) Xenopus tropicalis EST, clone TNeu108i09 3'.            44   0.002  2
(DT531892) JGI_CABH4141.fwd NIH_XGC_tropSkeMus1 Xenopus (Sil...    44   0.002  2
(CF225758) AGENCOURT_15066121 NICHD_XGC_Emb8 Xenopus (Silura...    44   0.002  2
(BX693617) Xenopus tropicalis EST, clone TNeu087f08 3'.            44   0.002  2
(CX430762) JGI_XZG61789.fwd NIH_XGC_tropGas7 Xenopus (Silura...    44   0.002  2
(CX391345) JGI_XZT38908.fwd NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(CX465357) JGI_XZG47000.fwd NIH_XGC_tropGas7 Xenopus (Silura...    44   0.002  2
(CX383598) JGI_XZT63653.fwd NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(DN099662) JGI_CABE8585.fwd NIH_XGC_tropOva1 Xenopus (Silura...    44   0.002  2
(DR849400) JGI_CABE12463.fwd NIH_XGC_tropOva1 Xenopus (Silur...    44   0.002  2
(CX341269) JGI_XZT45678.fwd NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(CR417068) Xenopus tropicalis EST, clone TTbA009j22 5'.            44   0.002  2
(CX373570) JGI_XZT57892.fwd NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(CX430761) JGI_XZG61789.rev NIH_XGC_tropGas7 Xenopus (Silura...    44   0.002  2
(CX401169) JGI_XZT49022.rev NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(DN012958) JGI_CAAQ10597.fwd NIH_XGC_tropHrt1 Xenopus (Silur...    44   0.002  2
(BX749517) Xenopus tropicalis EST, clone TGas072i13 3'.            44   0.002  2
(CF785504) AGENCOURT_15918260 XtSt10-30 Xenopus (Silurana) t...    44   0.002  2
(CR575943) Xenopus tropicalis EST, clone THdA040b22 3'.            44   0.002  2
(CX964067) JGI_CAAO12823.rev NIH_XGC_tropTe5 Xenopus (Silura...    44   0.002  2
(BX760545) Xenopus tropicalis EST, clone TGas143p14 3'.            44   0.002  2
(BX699147) Xenopus tropicalis EST, clone TNeu113e03 3'.            44   0.002  2
(EL865309) CBXT19682.g1 NICHD_XGC_trop_25 Xenopus (Silurana)...    44   0.002  2
(EL669120) CBST1688.rev NICHD_XGC_tropThy1 Xenopus (Silurana...    44   0.002  2
(EL860813) CBXT16540.b1 NICHD_XGC_trop_25 Xenopus (Silurana)...    44   0.002  2
(DN073228) JGI_CABD7639.rev NIH_XGC_tropLun1 Xenopus (Silura...    44   0.002  2
(DN071960) JGI_CABD6950.rev NIH_XGC_tropLun1 Xenopus (Silura...    44   0.002  2
(CX933315) JGI_CAAO2817.rev NIH_XGC_tropTe5 Xenopus (Siluran...    44   0.002  2
(EL674256) CBST5894.rev NICHD_XGC_tropThy1 Xenopus (Silurana...    44   0.002  2
(CX958207) JGI_CAAO9657.rev NIH_XGC_tropTe5 Xenopus (Siluran...    44   0.002  2
(CX412798) JGI_XZT29317.fwd NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(EL860814) CBXT16540.g1 NICHD_XGC_trop_25 Xenopus (Silurana)...    44   0.002  2
(DR878601) JGI_CABI1804.rev NIH_XGC_tropOvi1 Xenopus (Silura...    44   0.002  2
(DN099661) JGI_CABE8585.rev NIH_XGC_tropOva1 Xenopus (Silura...    44   0.002  2
(DN089706) JGI_CABE2957.rev NIH_XGC_tropOva1 Xenopus (Silura...    44   0.002  2
(DN086436) JGI_CABE1229.rev NIH_XGC_tropOva1 Xenopus (Silura...    44   0.002  2
(DN012957) JGI_CAAQ10597.rev NIH_XGC_tropHrt1 Xenopus (Silur...    44   0.002  2
(CX935697) JGI_CAAO4518.rev NIH_XGC_tropTe5 Xenopus (Siluran...    44   0.002  2
(CX363838) JGI_XZT24608.rev NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(DR849399) JGI_CABE12463.rev NIH_XGC_tropOva1 Xenopus (Silur...    44   0.002  2
(DN040787) JGI_CABA821.rev NIH_XGC_tropKid1 Xenopus (Siluran...    44   0.002  2
(BX691398) Xenopus tropicalis EST, clone TNeu111p24 3'.            44   0.002  2
(CX932618) JGI_CAAO2432.rev NIH_XGC_tropTe5 Xenopus (Siluran...    44   0.002  2
(CX488815) JGI_XZG30869.rev NIH_XGC_tropGas7 Xenopus (Silura...    44   0.002  2
(CX477325) JGI_XZG20595.rev NIH_XGC_tropGas7 Xenopus (Silura...    44   0.002  2
(CX447897) JGI_XZG25923.rev NIH_XGC_tropGas7 Xenopus (Silura...    44   0.002  2
(CX418056) JGI_XZG65318.rev NIH_XGC_tropGas7 Xenopus (Silura...    44   0.002  2
(CX394951) JGI_XZT27241.rev NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(CX392344) JGI_XZT39590.rev NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(CX341268) JGI_XZT45678.rev NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(EL671351) CBST4230.rev NICHD_XGC_tropThy1 Xenopus (Silurana...    44   0.002  2
(DC163103) Xenopus (Silurana) tropicalis NBRP cDNA clone: rs...    44   0.002  2
(CX412797) JGI_XZT29317.rev NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(DN040788) JGI_CABA821.fwd NIH_XGC_tropKid1 Xenopus (Siluran...    44   0.002  2
(CX368326) JGI_XZT31450.fwd NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(CX480123) JGI_XZG1003.rev NIH_XGC_tropGas7 Xenopus (Siluran...    44   0.002  2
(CX465356) JGI_XZG47000.rev NIH_XGC_tropGas7 Xenopus (Silura...    44   0.002  2
(AL955327) Xenopus tropicalis EST, clone TGas077o09 3'.            44   0.002  2
(EL803340) CBSW6876.g1 NICHD_XGC_tropTail_m Xenopus (Siluran...    44   0.002  2
(CX936749) JGI_CAAO5091.rev NIH_XGC_tropTe5 Xenopus (Siluran...    44   0.002  2
(CX478907) JGI_XZG255.fwd NIH_XGC_tropGas7 Xenopus (Silurana...    44   0.002  2
(EL868221) CBXT21686.g1 NICHD_XGC_trop_25 Xenopus (Silurana)...    44   0.002  2
(CX359207) JGI_XZT521.fwd NIH_XGC_tropTad5 Xenopus (Silurana...    44   0.002  2
(DN098394) JGI_CABE7914.rev NIH_XGC_tropOva1 Xenopus (Silura...    44   0.002  2
(DN087120) JGI_CABE1591.rev NIH_XGC_tropOva1 Xenopus (Silura...    44   0.002  2
(CX500897) JGI_XZG32023.rev NIH_XGC_tropGas7 Xenopus (Silura...    44   0.002  2
(CX368325) JGI_XZT31450.rev NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(CX478906) JGI_XZG255.rev NIH_XGC_tropGas7 Xenopus (Silurana...    44   0.002  2
(BX684874) Xenopus tropicalis EST, clone TNeu061n11 3'.            44   0.002  2
(EL638116) CBTC3840.fwd NICHD_XGC_tropBone1 Xenopus (Siluran...    44   0.002  2
(CX421662) JGI_XZG15782.fwd NIH_XGC_tropGas7 Xenopus (Silura...    44   0.002  2
(CX478858) JGI_XZG226.rev NIH_XGC_tropGas7 Xenopus (Silurana...    44   0.002  2
(CN115519) EC2CAA42DF11.g1 Xenopus tropicalis xthr plasmid l...    44   0.002  2
(CX336011) JGI_XZT18859.fwd NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(ES674052) CCAX1459.g1 NICHD_XGC_tropEye1 Xenopus (Silurana)...    44   0.002  2
(CX504011) JGI_XZG41129.rev NIH_XGC_tropGas7 Xenopus (Silura...    44   0.002  2
(AL901454) Xenopus tropicalis EST, clone TEgg014n16 3'.            44   0.002  2
(CX359206) JGI_XZT521.rev NIH_XGC_tropTad5 Xenopus (Silurana...    44   0.002  2
(CN115518) EC2CAA42DF11.b1 Xenopus tropicalis xthr plasmid l...    44   0.002  2
(CX504224) JGI_XZG41249.rev NIH_XGC_tropGas7 Xenopus (Silura...    44   0.002  2
(CX331037) JGI_XZT16781.fwd NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(EL850502) CBXT8639.b1 NICHD_XGC_trop_25 Xenopus (Silurana) ...    44   0.002  2
(BX687740) Xenopus tropicalis EST, clone TNeu051l09 3'.            44   0.002  2
(CX331036) JGI_XZT16781.rev NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(CX465104) JGI_XZG46850.rev NIH_XGC_tropGas7 Xenopus (Silura...    44   0.002  2
(BG514953) dad26e07.x1 Wellcome CRC pCS107 tropicalis St10-1...    44   0.002  2
(CX478587) JGI_XZG64.rev NIH_XGC_tropGas7 Xenopus (Silurana)...    44   0.002  2
(CX328276) JGI_XZT67460.fwd NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(DR900326) JGI_XZT52936.fwd NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(CX407708) JGI_XZT63062.fwd NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(BX745880) Xenopus tropicalis EST, clone TGas066a12 3'.            44   0.002  2
(CX330232) JGI_XZT16250.fwd NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(CX407707) JGI_XZT63062.rev NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(AL677617) Xenopus tropicalis EST, clone TNeu051l09 5'.            44   0.002  2
(CN107311) EC2CAA30AB05.b1 Xenopus tropicalis xthr plasmid l...    44   0.002  2
(AL961874) Xenopus tropicalis EST, clone TGas116f14 5'.            44   0.002  2
(CX382769) JGI_XZT53981.fwd NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(CN105948) EC2CAA28CD04.b1 Xenopus tropicalis xthr plasmid l...    44   0.002  2
(CX388566) JGI_XZT36991.fwd NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(DT529535) JGI_CABH2844.fwd NIH_XGC_tropSkeMus1 Xenopus (Sil...    44   0.002  2
(AL774397) Xenopus tropicalis EST, clone TGas080g24 5'.            44   0.002  2
(DT529534) JGI_CABH2844.rev NIH_XGC_tropSkeMus1 Xenopus (Sil...    44   0.002  2
(CX388565) JGI_XZT36991.rev NIH_XGC_tropTad5 Xenopus (Silura...    44   0.002  2
(BQ527228) NISC_no21b01.x1 NICHD_XGC_Emb8 Xenopus (Silurana)...    44   0.002  2
(CX421661) JGI_XZG15782.rev NIH_XGC_tropGas7 Xenopus (Silura...    44   0.002  2
(CF151253) AGENCOURT_14910265 NICHD_XGC_Emb8 Xenopus (Silura...    44   0.002  2
(CX471183) JGI_XZG4816.rev NIH_XGC_tropGas7 Xenopus (Siluran...    44   0.002  2
(CF226228) AGENCOURT_15088619 NICHD_XGC_Emb8 Xenopus (Silura...    44   0.002  2
(AL964218) Xenopus tropicalis EST, clone TGas096g24 5'.            44   0.002  2
(BX748022) Xenopus tropicalis EST, clone TGas053i08 3'.            44   0.009  2
(AF020427) Sarcophaga crassipalpis proliferating cell nuclea...    38   0.014  3
(AC182671) Populus trichocarpa clone Pop1-24F1, complete seq...    40   0.027  2
(AC184061) Populus trichocarpa clone Pop1-106E19, complete s...    40   0.027  2
(CX423346) JGI_XZG63485.fwd NIH_XGC_tropGas7 Xenopus (Silura...    38   0.12   2
(DN090124) JGI_CABE3177.fwd NIH_XGC_tropOva1 Xenopus (Silura...    38   0.12   2
(DC151790) Xenopus (Silurana) tropicalis NBRP cDNA clone: rs...    38   0.13   2
(DC182053) Xenopus (Silurana) tropicalis NBRP cDNA clone: st...    38   0.13   2
(DQ075689) Aedes albopictus proliferating cell nuclear antig...    50   0.16   1
(AM728223) Cucumis melo subsp. agrestis EST, clone A_19-G09-...    50   0.16   1
(FE257555) CAPH6688.rev CAPH Naegleria gruberi amoeba stage ...    50   0.16   1
(EH217427) USDA-FP_180228 WHMH (pink hibiscus mealybug) Maco...    34   0.22   3
(AJ516167) Mytilus galloprovincialis EST, clone GPPD00090.         38   0.30   3
(AC121012) Rattus norvegicus clone CH230-482A3, *** SEQUENCI...    40   0.41   4
(AW625931) EST319826 tomato radicle, 5 d post-imbibition, Co...    38   0.42   2
(AJ625793) Mytilus galloprovincialis EST, clone GPPD04911.         38   0.44   3
(FF486918) G708P512RF5.T0 Acorn worm normalized gastrula pEx...    34   0.53   3
(AL807393) Mouse DNA sequence from clone RP23-142A9 on chrom...    48   0.64   1
(FF631082) G825P546RA9.T0 Acorn worm normalized gastrula pEx...    34   0.69   3
(FC780633) CBGC12568.fwd CBGC Lottia gigantea 15h 18h embryo...    34   0.69   3
(FC807753) CBGC9198.fwd CBGC Lottia gigantea 15h 18h embryos...    34   0.71   3
(FC756234) CBBI9248.fwd CBBI Lottia gigantea 26h,37h,61h Lar...    34   0.71   3
(FC739610) CBBI11309.fwd CBBI Lottia gigantea 26h,37h,61h La...    34   0.72   3
(FC744469) CBBI14326.fwd CBBI Lottia gigantea 26h,37h,61h La...    34   0.73   3
(CA284774) SCSFSD1068F12.g SD1 Saccharum officinarum cDNA cl...    40   0.76   3
(FC712296) CAXY7368.fwd CAXY Lottia gigantea from male gonad...    34   0.76   3
(FC749974) CBBI4844.fwd CBBI Lottia gigantea 26h,37h,61h Lar...    34   0.79   3
(FC807885) CBGC9288.fwd CBGC Lottia gigantea 15h 18h embryos...    34   0.80   3
(FC789804) CBGC19934.fwd CBGC Lottia gigantea 15h 18h embryo...    34   0.80   3
(FC787041) CBGC17134.fwd CBGC Lottia gigantea 15h 18h embryo...    34   0.81   3
(FC722635) CBBG14808.fwd CBBG Lottia gigantea 12,15,18h embr...    34   0.82   3
(FC786724) CBGC16938.fwd CBGC Lottia gigantea 15h 18h embryo...    34   0.83   3
(FC801122) CBGC4185.fwd CBGC Lottia gigantea 15h 18h embryos...    34   0.85   3
(FC730877) CBBG6265.fwd CBBG Lottia gigantea 12,15,18h embry...    34   0.86   3
(FC722241) CBBG14555.fwd CBBG Lottia gigantea 12,15,18h embr...    34   0.86   3
(FC668253) CAXW626.fwd CAXW Lottia gigantea from female gona...    34   0.87   3
(FC722988) CBBG15019.fwd CBBG Lottia gigantea 12,15,18h embr...    34   0.88   3
(FC721400) CBBG14016.fwd CBBG Lottia gigantea 12,15,18h embr...    34   0.88   3
(FC708317) CAXY5167.fwd CAXY Lottia gigantea from male gonad...    34   0.89   3
(FC707652) CAXY4803.fwd CAXY Lottia gigantea from male gonad...    34   0.89   3
(FC788006) CBGC1847.fwd CBGC Lottia gigantea 15h 18h embryos...    34   0.89   3
(FC751789) CBBI5983.fwd CBBI Lottia gigantea 26h,37h,61h Lar...    34   0.89   3
(FC726268) CBBG3395.fwd CBBG Lottia gigantea 12,15,18h embry...    34   0.90   3
(FC703267) CAXY1888.fwd CAXY Lottia gigantea from male gonad...    34   0.94   3
(FC776458) CBGB464.fwd CBGB Lottia gigantea 3,6,9,12h embryo...    34   0.95   3
(FC724021) CBBG1853.fwd CBBG Lottia gigantea 12,15,18h embry...    34   0.95   3
(AC099863) Mus musculus chromosome 3, clone RP23-6F2, comple...    38   0.97   6
(FC704386) CAXY2549.fwd CAXY Lottia gigantea from male gonad...    34   0.99   3
(FC713361) CAXY8298.fwd CAXY Lottia gigantea from male gonad...    34   0.99   3
(BP112064) Bos taurus cDNA, clone:ORCS12670, 5' end.               44   1.4    2
(ES404920) MUT04-M14.y1d-s SHGC-MUT Mytilus californianus cD...    30   1.4    4
(ES403108) MUT08-F24.y1d-s SHGC-MUT Mytilus californianus cD...    30   1.5    4
(ES408129) MUT08-D15.y1d-s SHGC-MUT Mytilus californianus cD...    30   1.5    4
(FK713003) pl_075-A12 Ilyanassa (snail) 0-48h Ilyanassa obso...    42   1.5    2
(AC120364) Mus musculus chromosome 8, clone RP24-291F20, com...    38   2.1    3
(DN983154) SV66H01_SOL12A_012 SV6 Solanum chacoense cDNA, mR...    38   2.1    2
(EL421353) CHCL9562.b1_D16.ab1 CHC(LMS) Texas blueweed Helia...    36   2.1    2
(EL413839) CHCL11340.b1_G04.ab1 CHC(LMS) Texas blueweed Heli...    36   2.2    2
(AC102688) Mus musculus chromosome 5, clone RP24-138J15, com...    46   2.5    1
(EA215749) Sequence 80064 from patent US 7214786.                  46   2.5    1
(AC120082) Rattus norvegicus clone CH230-266E2, *** SEQUENCI...    46   2.5    1
(AC116775) Mus musculus clone RP24-389H3, WORKING DRAFT SEQU...    46   2.5    1
(AC112053) Rattus norvegicus clone CH230-194P16, *** SEQUENC...    46   2.5    1
(AC096199) Rattus norvegicus clone CH230-51B4, WORKING DRAFT...    46   2.5    1
(BH206371) Sm1-59M22.TR Sm1 Schistosoma mansoni genomic clon...    46   2.5    1
(ED290688) AUAC-aav10c04.b1 Ascaris suum whole genome shotgu...    46   2.5    1
(DU069020) 139380 Tomato HindIII BAC Library Solanum lycoper...    46   2.5    1
(CL832227) OR_CBa0054O04.r OR_CBa Oryza rufipogon genomic cl...    46   2.5    1
(AV406278) Bombyx mori cDNA clone:wdV30888.                        46   2.5    1
(AV406275) Bombyx mori cDNA clone:wdV30884.                        46   2.5    1
(AV402651) Bombyx mori cDNA clone:heS30274.                        46   2.5    1
(AV401209) Bombyx mori cDNA clone:e96h0376.                        46   2.5    1
(DT626395) EST1158319 Sequencing ESTs from loblolly pine emb...    46   2.5    1
(DT625666) EST1157590 Sequencing ESTs from loblolly pine emb...    46   2.5    1
(DR688781) EST1078866 Normalized pine embryo library, Lib_D ...    46   2.5    1
(DR181572) RTMNUT1_39_F01.g2_A029 Roots minus micronutrients...    46   2.5    1
(DR181487) RTMNUT1_39_F01.b2_A029 Roots minus micronutrients...    46   2.5    1
(DR096802) STRR1_30_A11.g1_A033 Stem Response Resistant Pinu...    46   2.5    1
(DR096736) STRR1_30_A11.b1_A033 Stem Response Resistant Pinu...    46   2.5    1
(DR025098) STRS1_69_C10.g1_A034 Shoot tip pitch canker susce...    46   2.5    1
(DR025020) STRS1_69_C10.b1_A034 Shoot tip pitch canker susce...    46   2.5    1
(DR020478) STRS1_37_F09.b1_A034 Shoot tip pitch canker susce...    46   2.5    1
(DN445157) EST940956 Sequencing ESTs from loblolly pine embr...    46   2.5    1
(DC550600) Bombyx mori cDNA, clone:E_FL_phe-_21O09_F_0, 5' e...    46   2.5    1
(DC542565) Bombyx mori cDNA, clone:E_FL_dpe-_17A16_F_0, 5' e...    46   2.5    1
(DC541038) Bombyx mori cDNA, clone:E_FL_dpe-_09D05_F_0, 5' e...    46   2.5    1
(DC540181) Bombyx mori cDNA, clone:E_FL_dpe-_04M16_F_0, 5' e...    46   2.5    1
(DC539650) Bombyx mori cDNA, clone:E_FL_dpe-_01O24_F_0, 5' e...    46   2.5    1
(CV139094) EST850303 Sequencing ESTs from loblolly pine embr...    46   2.5    1
(CV137773) EST848982 Sequencing ESTs from loblolly pine embr...    46   2.5    1
(CV137337) EST848546 Sequencing ESTs from loblolly pine embr...    46   2.5    1
(CV133977) EST845186 Sequencing ESTs from loblolly pine embr...    46   2.5    1
(CT566813) Rainbow trout liver SSH library from warm, cold a...    46   2.5    1
(CN639307) 238B02_553048 Douglas-fir cDNA library PmIFG_73-6...    46   2.5    1
(CN375308) rzhswab0_003408 Silkworm posterior silkgland libr...    46   2.5    1
(CK565011) rswpb0_010565.y1 swp Bombyx mori cDNA, mRNA seque...    46   2.5    1
(CK564121) rswpb0_007539.y1 swp Bombyx mori cDNA, mRNA seque...    46   2.5    1
(CK563571) rswpb0_006793.y1 swp Bombyx mori cDNA, mRNA seque...    46   2.5    1
(CK561739) rswpb0_004611.y1 swp Bombyx mori cDNA, mRNA seque...    46   2.5    1
(CK560552) rswpb0_002966.y1 swp Bombyx mori cDNA, mRNA seque...    46   2.5    1
(CK558985) rswpb0_000902.y1 swp Bombyx mori cDNA, mRNA seque...    46   2.5    1
(CK546886) swk_000396.z1 swk Bombyx mori cDNA, mRNA sequence.      46   2.5    1
(CK545192) rswhb0_015937.y1 swh Bombyx mori cDNA, mRNA seque...    46   2.5    1
(CK532857) rswgb0_000635.y1 swg Bombyx mori cDNA, mRNA seque...    46   2.5    1
(CK518302) rswjb0_006917.y1 swj Bombyx mori cDNA, mRNA seque...    46   2.5    1
(CK517485) rswjb0_005719.y1 swj Bombyx mori cDNA, mRNA seque...    46   2.5    1
(CK515135) rswjb0_002347.y1 swj Bombyx mori cDNA, mRNA seque...    46   2.5    1
(CF400695) RTWW1_7_H10.b1_A015 Well-watered loblolly pine ro...    46   2.5    1
(CF400629) RTWW1_6_E08.g1_A015 Well-watered loblolly pine ro...    46   2.5    1
(CA596151) wpa1c.pk012.h2 wpa1c Triticum aestivum cDNA clone...    46   2.5    1
(BY940769) Bombyx mori cDNA, clone:E_FL_e100_10J03_F_0, 5' e...    46   2.5    1
(BY938367) Bombyx mori cDNA, clone:E_FL_e100_05O09_F_0, 5' e...    46   2.5    1
(BY917317) Bombyx mori cDNA, clone:wv40118, 5' end sequence.       46   2.5    1
(BP179338) Bombyx mori cDNA, clone: ovS301D12f, 5' end seque...    46   2.5    1
(BP125699) Bombyx mori cDNA, clone:heS30274, 5' end sequence.      46   2.5    1
(BB985848) Bombyx mori cDNA, clone:E_ET_MSV3_10F05_F_0, 5' e...    46   2.5    1
(FL864602) CCGI8512.b1 CCGI Panicum virgatum etiolated seedl...    46   2.5    1
(FD468808) BOT_8_12b BOT Triticum turgidum subsp. durum cDNA...    46   2.5    1
(AC121826) Mus musculus BAC clone RP23-470O13 from chromosom...    38   3.1    6
(AG359338) Mus musculus molossinus DNA, clone:MSMg01-159G06....    36   3.5    3
(AB239703) Botryllus primigenus PCNA mRNA for proliferating ...    36   5.4    3
(EX471606) HA_MX1_40e11_SP6 Lobster Multiple Tissues, Normal...    42   5.7    2
(BZ078958) lki12h08.g1 B.oleracea002 Brassica oleracea genom...    32   6.4    2
(FC071963) HA_MX2_08f01_SP6 Lobster Multiple Tissues, Normal...    42   6.5    2
(EG409761) SAAH-aaa40h01.b1 Agen 0058 Schmidtea mediterranea...    34   6.5    2
(EC617463) SAAH-aaa40h01.g1 Agen 0058 Schmidtea mediterranea...    34   6.6    2
(AC153816) Mus musculus  BAC RP23-8N6 (Roswell Park Cancer I...    40   8.4    3
(M34080) X.laevis proliferating cell nuclear antigen (PCNA) ...    44   10.0   1
(CR753869) Zebrafish DNA sequence from clone DKEY-286N21 in ...    44   10.0   1
(BC057758) Xenopus laevis proliferating cell nuclear antigen...    44   10.0   1
(BC041549) Xenopus laevis similar to proliferating cell nucl...    44   10.0   1
(AB039964) Xenopus laevis PCNA mRNA for proliferating cell n...    44   10.0   1
(AB039963) Xenopus laevis PCNA mRNA for proliferating cell n...    44   10.0   1
(AB039962) Xenopus laevis PCNA mRNA for proliferating cell n...    44   10.0   1
(AC158228) Mus musculus chromosome 5, clone RP23-118K12, com...    44   10.0   1
(AC102099) Mus musculus chromosome 5, clone RP23-52A2, compl...    44   10.0   1
(AC092711) Mus musculus chromosome 5, clone RP23-7D3, comple...    44   10.0   1
(BS000043) Pan troglodytes chromosome 22 clone:RP43-169N06, ...    44   10.0   1
(AC213321) MACACA MULATTA BAC clone CH250-541A11 from chromo...    44   10.0   1
(AC189024) Rhesus macaque BAC clone CH250-84H12 from chromos...    44   10.0   1
(BT053514) Medicago truncatula clone MTYFP_FQ_FR_FS1G-H-1 un...    44   10.0   1
(AP010386) Lotus japonicus genomic DNA, chromosome 1, clone:...    44   10.0   1
(AC146589) Medicago truncatula clone mth2-145o21, complete s...    44   10.0   1
(AC127021) Medicago truncatula clone mth2-5e5, complete sequ...    44   10.0   1
(BX072579) Human DNA sequence from clone RP11-199F6 on chrom...    44   10.0   1
(AC187647) Homo sapiens chromosome 13 clone WI2-2967A3, comp...    44   10.0   1
(AC055761) Homo sapiens 3 BAC RP11-73L6 (Roswell Park Cancer...    44   10.0   1
(AC007319) Homo sapiens BAC clone RP11-432D12 from 2, comple...    44   10.0   1
(AC132536) Rattus norvegicus clone CH230-18G24, *** SEQUENCI...    44   10.0   1
(AC118320) Rattus norvegicus clone CH230-387I15, WORKING DRA...    44   10.0   1
(AC096431) Rattus norvegicus clone CH230-43A6, WORKING DRAFT...    44   10.0   1
(AC063937) Homo sapiens chromosome 3 clone RP11-79A14, WORKI...    44   10.0   1
(AC046198) Homo sapiens chromosome 2 clone RP11-447D1 map 2,...    44   10.0   1
(CU463123) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   10.0   1
(CT954263) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   10.0   1
(AC221600) Bos taurus clone CH240-391E18, WORKING DRAFT SEQU...    44   10.0   1
(AC221141) Bos taurus clone CH240-394J14, WORKING DRAFT SEQU...    44   10.0   1
(AB107101) Homo sapiens genomic DNA, chromosome 3q25-q26, cl...    44   10.0   1
(BC034570) Homo sapiens hypothetical protein LOC643365, mRNA...    44   10.0   1
(AZ723797) RPCI-24-76D12.TV RPCI-24 Mus musculus genomic clo...    44   10.0   1
(AQ449984) 500006F03.x1 CpIOWAM13mp18gDNA1 Cryptosporidium p...    44   10.0   1
(FH517561) CHO_OF4391xd09f1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   10.0   1
(AM607638) Entamoeba invadens IP1 GSS, clone inv082b04.p1k.        44   10.0   1
(EI805025) MUGQ_CH252P514K10T7_GL517_037 CHORI-252 Vervet Mo...    44   10.0   1
(EI318917) GM_WBc0053E23.r GM_WBc Glycine max genomic clone ...    44   10.0   1
(CG757646) P053-1-A06.zc Ppa EcoRI BAC Library Pristionchus ...    44   10.0   1
(CE371274) tigr-gss-dog-17000362062442 Dog Library Canis lup...    44   10.0   1
(CE337623) tigr-gss-dog-17000334054381 Dog Library Canis lup...    44   10.0   1
(CC598121) ZMMBBc0410E13r ZMMBBc Zea mays subsp. mays genomi...    44   10.0   1
(CC591190) CH240_391E18.TARBAC13P2 CHORI-240 Bos taurus geno...    44   10.0   1
(BZ388881) EINAQ82TF EI_10_12_KB Entamoeba invadens genomic ...    44   10.0   1
(BZ387006) EINEA77TF EI_10_12_KB Entamoeba invadens genomic ...    44   10.0   1
(EB731366) AGENCOURT_78540170 NICHD_XGC_thy Xenopus laevis c...    44   10.0   1
(EB564318) AGENCOURT_51796751 D. virilis EST Drosophila viri...    44   10.0   1
(EB559353) AGENCOURT_51878121 D. virilis EST Drosophila viri...    44   10.0   1
(EB558847) AGENCOURT_51877118 D. virilis EST Drosophila viri...    44   10.0   1
(EB471469) AGENCOURT_73509259 NICHD_XGC_sple_PHA Xenopus lae...    44   10.0   1
(EB461954) AGENCOURT_73529384 NICHD_XGC_sple_PHA Xenopus lae...    44   10.0   1
(DY569602) AGENCOURT_71293273 NICHD_XGC_Ov1 Xenopus laevis c...    44   10.0   1
(DY559438) AGENCOURT_71266386 NICHD_XGC_Ov1 Xenopus laevis c...    44   10.0   1
(DY559081) AGENCOURT_71265978 NICHD_XGC_Ov1 Xenopus laevis c...    44   10.0   1
(DY417566) 1532607 MARC 3PIG Sus scrofa cDNA 5', mRNA sequence.    44   10.0   1
(DY413498) 1519423 MARC 3PIG Sus scrofa cDNA 3', mRNA sequence.    44   10.0   1
(DV044172) DAY10_18_C18.x1 FH DAY10 Mus musculus cDNA clone ...    44   10.0   1
(DT791920) 127402363 TL1 Tribolium castaneum cDNA clone 32I1...    44   10.0   1
(AU278610) Bos taurus cDNA clone:placenta0838, 3' end, expre...    44   10.0   1
(DC133370) Xenopus laevis NBRP cDNA clone:xl334g06, 5' end.        44   10.0   1
(DC131241) Xenopus laevis NBRP cDNA clone:xl327e12, 5' end.        44   10.0   1
(DC097342) Xenopus laevis NBRP cDNA clone:rxl334g06, 3' end.       44   10.0   1
(DC096772) Xenopus laevis NBRP cDNA clone:rxl332e18, 3' end.       44   10.0   1
(DC087243) Xenopus laevis NBRP cDNA clone:rxl296h21, 3' end.       44   10.0   1
(DC082111) Xenopus laevis NBRP cDNA clone:rxl221e16, 3' end.       44   10.0   1
(DC079265) Xenopus laevis NBRP cDNA clone:rxl267p08, 3' end.       44   10.0   1
(DC075100) Xenopus laevis NBRP cDNA clone:rxl253c13, 3' end.       44   10.0   1
(DC073100) Xenopus laevis NBRP cDNA clone:rxl245p12, 3' end.       44   10.0   1
(DC072462) Xenopus laevis NBRP cDNA clone:rxl243j23, 3' end.       44   10.0   1
(DC071872) Xenopus laevis NBRP cDNA clone:rxl241i03, 3' end.       44   10.0   1
(DC060811) Xenopus laevis NBRP cDNA clone:xlk79i21ex, 5' end.      44   10.0   1
(DC050179) Xenopus laevis NBRP cDNA clone:xlk145c10ex, 5' end.     44   10.0   1
(DC047648) Xenopus laevis NBRP cDNA clone:xlk137g22ex, 5' end.     44   10.0   1
(DC041947) Xenopus laevis NBRP cDNA clone:xlk119o20ex, 5' end.     44   10.0   1
(DC035118) Xenopus laevis NBRP cDNA clone:xlk58f18ex, 5' end.      44   10.0   1
(DC032395) Xenopus laevis NBRP cDNA clone:rxlk165m05ex, 3' end.    44   10.0   1
(DC031960) Xenopus laevis NBRP cDNA clone:rxlk164f20ex, 3' end.    44   10.0   1
(DC027331) Xenopus laevis NBRP cDNA clone:rxlk79i21ex, 3' end.     44   10.0   1
(DC025939) Xenopus laevis NBRP cDNA clone:rxlk75c03ex, 3' end.     44   10.0   1
(DC016861) Xenopus laevis NBRP cDNA clone:rxlk145c10ex, 3' end.    44   10.0   1
(DC014417) Xenopus laevis NBRP cDNA clone:rxlk137g22ex, 3' end.    44   10.0   1
(DC012855) Xenopus laevis NBRP cDNA clone:rxlk132g23ex, 3' end.    44   10.0   1
(DC012730) Xenopus laevis NBRP cDNA clone:rxlk132a03ex, 3' end.    44   10.0   1
(DC009217) Xenopus laevis NBRP cDNA clone:rxlk120m24ex, 3' end.    44   10.0   1
(DC008971) Xenopus laevis NBRP cDNA clone:rxlk119o20ex, 3' end.    44   10.0   1
(DC006660) Xenopus laevis NBRP cDNA clone:rxlk112h07ex, 3' end.    44   10.0   1
(DC005153) Xenopus laevis NBRP cDNA clone:rxlk107k08ex, 3' end.    44   10.0   1
(DC002282) Xenopus laevis NBRP cDNA clone:rxlk58f18ex, 3' end.     44   10.0   1
(DB855216) Nilaparvata lugens mRNA, EST clone:NLNA8118, 5' e...    44   10.0   1
(AU234209) Bos taurus cDNA clone:Cln838, 3' end, expressed i...    44   10.0   1
(CX418057) JGI_XZG65318.fwd NIH_XGC_tropGas7 Xenopus (Silura...    44   10.0   1
(CX132468) AGENCOURT_39777666 NICHD_XGC_Te2N Xenopus laevis ...    44   10.0   1
(CV102439) AGENCOURT_31519002 NICHD_XGC_Te2 Xenopus laevis c...    44   10.0   1
(CT853469) Oryza sativa Indica Group EST sequence:OSIGCRN116...    44   10.0   1
(AL381851) Medicago truncatula EST MtBC03D04R1 : T7 end of c...    44   10.0   1
(BX843579) RZPD Xenopus laevis cDNA clone IMAGp998H128393 = ...    44   10.0   1
(BQ387387) NISC_mn23e09.x1 NICHD_XGC_Ov1 Xenopus laevis cDNA...    44   10.0   1
(BQ385565) NISC_mn13a09.x1 NICHD_XGC_Ov1 Xenopus laevis cDNA...    44   10.0   1
(BQ384072) NISC_mn04g02.x1 NICHD_XGC_Ov1 Xenopus laevis cDNA...    44   10.0   1
(BQ383485) NISC_mn01d07.x1 NICHD_XGC_Ov1 Xenopus laevis cDNA...    44   10.0   1
(AI031069) 22G11-1P Xenopus neurula plasmid library Xenopus ...    44   10.0   1
(BP741767) Xenopus laevis NBRP cDNA clone:XL499j16ex, 3' end.      44   10.0   1
(BP740471) Xenopus laevis NBRP cDNA clone:XL494o21ex, 3' end.      44   10.0   1
(BP740394) Xenopus laevis NBRP cDNA clone:XL494k14ex, 3' end.      44   10.0   1
(BP740362) Xenopus laevis NBRP cDNA clone:XL494i22ex, 3' end.      44   10.0   1
(BP740325) Xenopus laevis NBRP cDNA clone:XL494g22ex, 3' end.      44   10.0   1
(BP735947) Xenopus laevis NBRP cDNA clone:XL507a18ex, 3' end.      44   10.0   1
(BP733445) Xenopus laevis NBRP cDNA clone:XL490j24ex, 3' end.      44   10.0   1
(BP732903) Xenopus laevis NBRP cDNA clone:XL489j01ex, 3' end.      44   10.0   1
(BP732103) Xenopus laevis NBRP cDNA clone:XL486n10ex, 3' end.      44   10.0   1
(BP727532) Xenopus laevis NBRP cDNA clone:XL470e12ex, 3' end.      44   10.0   1
(BP724801) Xenopus laevis NBRP cDNA clone:XL460l03ex, 3' end.      44   10.0   1
(BP720861) Xenopus laevis NBRP cDNA clone:XL447j17ex, 3' end.      44   10.0   1
(BP720785) Xenopus laevis NBRP cDNA clone:XL447f17ex, 3' end.      44   10.0   1
(BP718294) Xenopus laevis NBRP cDNA clone:XL439c21ex, 3' end.      44   10.0   1
(BP715722) Xenopus laevis NBRP cDNA clone:XL402m12ex, 3' end.      44   10.0   1
(BP712379) Xenopus laevis NBRP cDNA clone:XL417o12ex, 3' end.      44   10.0   1
(BP712164) Xenopus laevis NBRP cDNA clone:XL417b22ex, 3' end.      44   10.0   1
(BP711009) Xenopus laevis NBRP cDNA clone:XL412j14ex, 3' end.      44   10.0   1
(BP708546) Xenopus laevis NBRP cDNA clone:XL494o21ex, 5' end.      44   10.0   1
(BP708461) Xenopus laevis NBRP cDNA clone:XL494k14ex, 5' end.      44   10.0   1
(BP693339) Xenopus laevis NBRP cDNA clone:XL470e12ex, 5' end.      44   10.0   1
(BP684973) Xenopus laevis NBRP cDNA clone:XL447j17ex, 5' end.      44   10.0   1
(BP681916) Xenopus laevis NBRP cDNA clone:XL439c21ex, 5' end.      44   10.0   1
(BP678747) Xenopus laevis NBRP cDNA clone:XL402m12ex, 5' end.      44   10.0   1
(BP674564) Xenopus laevis NBRP cDNA clone:XL417b22ex, 5' end.      44   10.0   1
(BP673036) Xenopus laevis NBRP cDNA clone:XL412j14ex, 5' end.      44   10.0   1
(BM262738) daj01h09.x1 NICHD_XGC_Ov1 Xenopus laevis cDNA clo...    44   10.0   1
(BJ640587) Xenopus laevis cDNA clone:XL206n08, 3' end.             44   10.0   1
(BJ635175) Xenopus laevis cDNA clone:XL185l22, 3' end.             44   10.0   1
(BJ634006) Xenopus laevis cDNA clone:XL181b17, 3' end.             44   10.0   1
(BJ629432) Xenopus laevis cDNA clone:XL161g11, 3' end.             44   10.0   1
(BJ050502) Xenopus laevis cDNA clone:XL024k09, 3' end, singl...    44   10.0   1
(BG656756) df47g09.y1 Wellcome CRC pRN3 head Xenopus laevis ...    44   10.0   1
(BG113294) 602283191F1 NIH_MGC_86 Homo sapiens cDNA clone IM...    44   10.0   1
(BF615329) dg21h11.y1 Xenopus laevis gastrula non normalized...    44   10.0   1
(BF428219) daa06c05.x1 NICHD_XGC_Ov1 Xenopus laevis cDNA clo...    44   10.0   1
(BE026611) db29a06.x1 Xenopus laevis oocyte Xenopus laevis c...    44   10.0   1
(BE026526) db27f08.x1 Xenopus laevis oocyte Xenopus laevis c...    44   10.0   1
(GO205642) CAGB20704.fwd CAGB Alvinella pompejana Normalized...    44   10.0   1
(GO183560) CAGA8180.fwd CAGA Alvinella pompejana Normalized ...    44   10.0   1
(GO160011) CAGA38904.fwd CAGA Alvinella pompejana Normalized...    44   10.0   1
(GO140250) CAGA28856.fwd CAGA Alvinella pompejana Normalized...    44   10.0   1
(GO140249) CAGA28856.rev CAGA Alvinella pompejana Normalized...    44   10.0   1
(FM099267) Rattus norvegicus EST, 5'-end sequence, clone etn...    44   10.0   1
(FK755862) av02117h21r1.1 Symbiotic sea anemone (Anemonia vi...    44   10.0   1
(FK744247) av02071a20r1.1 Symbiotic sea anemone (Anemonia vi...    44   10.0   1
(FK743844) av02079l20r1.1 Symbiotic sea anemone (Anemonia vi...    44   10.0   1
(FK739201) av02095d13r1.1 Symbiotic sea anemone (Anemonia vi...    44   10.0   1
(FK738983) av02074d14r1.1 Symbiotic sea anemone (Anemonia vi...    44   10.0   1
(FK732177) av02130j21r1.1 Symbiotic sea anemone (Anemonia vi...    44   10.0   1
(FK728110) av02111o17r1.1 Symbiotic sea anemone (Anemonia vi...    44   10.0   1
(FK723559) av02127e01r1.1 Symbiotic sea anemone (Anemonia vi...    44   10.0   1
(FE238466) CAPG487.rev CAPG Naegleria gruberi amoeba stage N...    44   10.0   1
(FE233786) CAPG2471.rev CAPG Naegleria gruberi amoeba stage ...    44   10.0   1
(AW782881) db24h01.x1 Xenopus laevis oocyte Xenopus laevis c...    44   10.0   1
(EV936550) rche25_f12.y1 che Sus scrofa cDNA 5', mRNA sequence.    44   10.0   1
(AW200636) da23h04.y1 normalized Xenopus laevis gastrula Xen...    44   10.0   1
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet...    44   10.0   1
(CP000939) Clostridium botulinum B1 str. Okra, complete genome.    44   10.0   1
(CP000727) Clostridium botulinum A str. Hall, complete genome.     44   10.0   1
(CP000726) Clostridium botulinum A str. ATCC 19397, complete...    44   10.0   1
(AP008934) Staphylococcus saprophyticus subsp. saprophyticus...    44   10.0   1
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g...    44   10.0   1

>(BJ398471) Dictyostelium discoideum cDNA clone:dds12f17, 3' end,
           single read.
          Length = 578

 Score = 1080 bits (545), Expect = 0.0
 Identities = 549/551 (99%)
 Strand = Plus / Minus


Query: 283 ctggtaatgatgataccctcaccattagagctcgtgataatgaatctgataccgttactt 342
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ctggtaatgatgataccctcaccattagagctcgtgataatgaatctgataccgttactt 519


Query: 343 ttgttttcgaatcaccaaagaatgatagagttagtgattttgaaattaaattaatcgata 402
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ttgttttcgaatcaccaaagaatgatagagttagtgattttgaaattaaattaatcgata 459


Query: 403 ttaagaatgaacaatatagtatccgtaaatcagattactctgcagttattaagatgccat 462
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ttaagaatgaacaatatagtatccgtaaatcagattactctgcagttattaagatgccat 399


Query: 463 cagctgaactccaaagaatttgtagagatctctccatcattggtgaaattgttaccatta 522
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 398 cagctgaactccaaagaatttgtagagatctntccatcattggtgaaattgttaccatta 339


Query: 523 gtgccaataaagaaggtgttaaattctctgtttcaggtgattcaggttctggtaacatta 582
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gtgccaataaagaaggtgttaaattctctgtttcaggtgattcaggttctggtaacatta 279


Query: 583 ccattaaaccaacctctgactctgatgtcccagccgaacaagctaccgtcattgaatcaa 642
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ccattaaaccaacctctgactctgatgtcccagccgaacaagctaccgtcattgaatcaa 219


Query: 643 aagaaccagtcgtccttaactttgccttaaaattcctttcaaactttaccaaagctactc 702
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 aagaaccagtcgtccttaactttgccttaaaattcctttcaaactttaccaaagctactc 159


Query: 703 cactctcaccaatggttactctttcaatgtctgaaggtatcccagttgttgttgaataca 762
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 cactctcaccaatggttactctttcaatgtctgaaggtatcccagttgttgttgaataca 99


Query: 763 aaatagacgatttaggctttttaggattcttccttgcacctaaaattgaataagtttggc 822
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 98  aaatagacgatttaggctttttaggattcttccntgcacctaaaattgaataagtttggc 39


Query: 823 cagaattagtc 833
           |||||||||||
Sbjct: 38  cagaattagtc 28

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,088,719,925
Number of extensions: 63501014
Number of successful extensions: 5080304
Number of sequences better than 10.0: 418
Length of query: 973
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 949
Effective length of database: 99,340,224,878
Effective search space: 94273873409222
Effective search space used: 94273873409222
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.29
Homology vs Protein 
Query= Contig-U03566-1 (Contig-U03566-1Q) /CSM_Contig/Contig-U03566-1Q.Seq.d
         (973 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54K47) RecName: Full=Proliferating cell nuclear antigen;      ...   471   e-131
(O82797) RecName: Full=Proliferating cell nuclear antigen;      ...   296   7e-79
AM448721_1(AM448721|pid:none) Vitis vinifera contig VV78X155041....   296   9e-79
AJ012662_1(AJ012662|pid:none) Nicotiana tabacum mRNA for prolife...   295   2e-78
(P24314) RecName: Full=Proliferating cell nuclear antigen;      ...   294   3e-78
AF305075_1(AF305075|pid:none) Nicotiana benthamiana proliferatin...   294   4e-78
AJ515747_1(AJ515747|pid:none) Lycopersicon esculentum mRNA for p...   293   6e-78
EF602032_1(EF602032|pid:none) Phaseolus coccineus proliferating ...   293   6e-78
(Q43124) RecName: Full=Proliferating cell nuclear antigen;      ...   292   1e-77
(Q00268) RecName: Full=Proliferating cell nuclear antigen;      ...   291   2e-77
(Q9M7Q7) RecName: Full=Proliferating cellular nuclear antigen 1;...   291   2e-77
CQ887943_1(CQ887943|pid:none) Sequence 21 from Patent WO20040856...   291   2e-77
(Q9ZW35) RecName: Full=Proliferating cell nuclear antigen 2;    ...   290   4e-77
AF083220_1(AF083220|pid:none) Arabidopsis thaliana proliferating...   290   5e-77
S20592(S20592)proliferating cell nuclear antigen (clone 4.10) - ...   290   7e-77
(Q43266) RecName: Full=Proliferating cell nuclear antigen;      ...   289   1e-76
AY836671_1(AY836671|pid:none) Populus tomentosa proliferating ce...   286   7e-76
(Q00265) RecName: Full=Proliferating cell nuclear antigen large ...   286   7e-76
(P17918) RecName: Full=Proliferating cell nuclear antigen;      ...   286   1e-75
(P04961) RecName: Full=Proliferating cell nuclear antigen;      ...   286   1e-75
DQ215906_1(DQ215906|pid:none) Taeniopygia guttata clone 0058P004...   285   2e-75
AY891229_1(AY891229|pid:none) Synthetic construct Homo sapiens c...   284   4e-75
DQ215907_1(DQ215907|pid:none) Taeniopygia guttata clone 0058P003...   284   4e-75
(P12004) RecName: Full=Proliferating cell nuclear antigen;      ...   284   4e-75
DQ075690_1(DQ075690|pid:none) Aedes aegypti proliferating cell n...   283   5e-75
AB039962_1(AB039962|pid:none) Xenopus laevis PCNA mRNA for proli...   283   5e-75
AY893318_1(AY893318|pid:none) Synthetic construct Homo sapiens c...   283   8e-75
(P18248) RecName: Full=Proliferating cell nuclear antigen;      ...   282   1e-74
EF051247_1(EF051247|pid:none) Fenneropenaeus chinensis prolifera...   282   1e-74
DQ075689_1(DQ075689|pid:none) Aedes albopictus proliferating cel...   281   2e-74
X62976_1(X62976|pid:none) D.carota mRNA for larger proliferating...   281   2e-74
CR541799_1(CR541799|pid:none) Homo sapiens full open reading fra...   280   5e-74
(Q6B6N4) RecName: Full=Proliferating cell nuclear antigen;      ...   273   5e-72
BT075704_1(BT075704|pid:none) Osmerus mordax clone omor-rgc-506-...   272   1e-71
(Q9PTP1) RecName: Full=Proliferating cell nuclear antigen;      ...   271   2e-71
(P53358) RecName: Full=Proliferating cell nuclear antigen;      ...   271   3e-71
(O01377) RecName: Full=Proliferating cell nuclear antigen;      ...   270   6e-71
BT078863_1(BT078863|pid:none) Esox lucius clone eluc-evq-506-057...   270   7e-71
BT046966_1(BT046966|pid:none) Salmo salar clone ssal-evf-558-027...   269   9e-71
(Q9W644) RecName: Full=Proliferating cell nuclear antigen;      ...   268   2e-70
AB239703_1(AB239703|pid:none) Botryllus primigenus PCNA mRNA for...   267   5e-70
AB162349_9(AB162349|pid:none) Drosophila simulans genes, CG11099...   265   2e-69
FN357409_18(FN357409|pid:none) Schistosoma mansoni genome sequen...   264   4e-69
CP000586_281(CP000586|pid:none) Ostreococcus lucimarinus CCE9901...   263   7e-69
FN315405_1(FN315405|pid:none) Schistosoma japonicum isolate Anhu...   263   9e-69
DQ421413_1(DQ421413|pid:none) Pseudacris regilla proliferating c...   262   1e-68
BT078405_1(BT078405|pid:none) Lepeophtheirus salmonis Pacific fo...   261   2e-68
AF140608_1(AF140608|pid:none) Danio rerio proliferating cell nuc...   261   3e-68
FN315403_1(FN315403|pid:none) Schistosoma japonicum isolate Anhu...   261   3e-68
FN357409_19(FN357409|pid:none) Schistosoma mansoni genome sequen...   257   5e-67
AB186394_1(AB186394|pid:none) Dugesia japonica Djpcna mRNA for p...   256   8e-67
AK340290_1(AK340290|pid:none) Acyrthosiphon pisum ACYPI003821 mR...   256   1e-66
(P22177) RecName: Full=Proliferating cell nuclear antigen;      ...   253   9e-66
AM920431_971(AM920431|pid:none) Penicillium chrysogenum Wisconsi...   249   1e-64
AM269959_35(AM269959|pid:none) Aspergillus niger contig An01c012...   248   2e-64
AP007155_735(AP007155|pid:none) Aspergillus oryzae RIB40 genomic...   247   4e-64
T28761(T28761)hypothetical protein W03D2.4 - Caenorhabditis eleg...   240   5e-62
AY812083_1(AY812083|pid:none) Schistosoma japonicum SJCHGC05965 ...   232   2e-59
CP000882_127(CP000882|pid:none) Hemiselmis andersenii chromosome...   232   2e-59
DQ239830_1(DQ239830|pid:none) Rhodomonas sp. CCMP768 proliferati...   227   4e-58
CQ887949_1(CQ887949|pid:none) Sequence 27 from Patent WO20040856...   218   3e-55
AF034201_1(AF034201|pid:none) Dunaliella tertiolecta proliferati...   216   1e-54
DQ647777_1(DQ647777|pid:none) Alexandrium affine strain CCMP112 ...   214   5e-54
BT036149_1(BT036149|pid:none) Zea mays full-length cDNA clone ZM...   211   2e-53
EF134030_1(EF134030|pid:none) Karlodinium micrum isolate Kmi-pcn...   211   3e-53
EF134029_1(EF134029|pid:none) Karlodinium micrum isolate Kmi-pcn...   210   5e-53
EF133929_1(EF133929|pid:none) Katodinium rotundatum clone 3 prol...   209   9e-53
EF133957_1(EF133957|pid:none) Alexandrium fundyense clone 1 prol...   209   1e-52
EF133959_1(EF133959|pid:none) Alexandrium fundyense clone 3 prol...   209   1e-52
AB195794_1(AB195794|pid:none) Drosophila melanogaster mRNA for p...   208   2e-52
EF133943_1(EF133943|pid:none) Prorocentrum micans clone 6 prolif...   208   2e-52
EF133938_1(EF133938|pid:none) Prorocentrum micans clone 1 prolif...   207   6e-52
EF133949_1(EF133949|pid:none) Prorocentrum micans clone 12 proli...   206   7e-52
CR382136_771(CR382136|pid:none) Debaryomyces hansenii strain CBS...   206   1e-51
AY231764_1(AY231764|pid:none) Drosophila yakuba clone yak-em_mus...   206   1e-51
DQ647775_1(DQ647775|pid:none) Peridinium foliaceum strain CCMP13...   205   2e-51
EF133947_1(EF133947|pid:none) Prorocentrum micans clone 10 proli...   205   2e-51
CQ887953_1(CQ887953|pid:none) Sequence 31 from Patent WO20040856...   205   2e-51
EF133950_1(EF133950|pid:none) Prorocentrum micans clone 13 proli...   205   2e-51
EF133946_1(EF133946|pid:none) Prorocentrum micans clone 9 prolif...   204   5e-51
DQ239852_1(DQ239852|pid:none) Pfiesteria piscicida strain CCMP18...   203   8e-51
EF133906_1(EF133906|pid:none) Alexandrium affine clone 1 prolife...   202   1e-50
EF133917_1(EF133917|pid:none) Alexandrium affine clone 12 prolif...   201   3e-50
EF133915_1(EF133915|pid:none) Alexandrium affine clone 10 prolif...   201   3e-50
EF133918_1(EF133918|pid:none) Alexandrium affine clone 13 prolif...   201   4e-50
(O02115) RecName: Full=Proliferating cell nuclear antigen;      ...   199   9e-50
EF133910_1(EF133910|pid:none) Alexandrium affine clone 5 prolife...   197   5e-49
DQ647778_1(DQ647778|pid:none) Oxyrrhis marina proliferating cell...   197   6e-49
FM992691_153(FM992691|pid:none) Candida dubliniensis CD36 chromo...   196   1e-48
EF133934_1(EF133934|pid:none) Peridinium foliaceum clone 4 proli...   196   1e-48
EF133931_1(EF133931|pid:none) Peridinium foliaceum clone 1 proli...   195   2e-48
EF133932_1(EF133932|pid:none) Peridinium foliaceum clone 2 proli...   194   3e-48
AF083031_26(AF083031|pid:none) Guillardia theta nucleomorph chro...   192   2e-47
CU928169_630(CU928169|pid:none) Kluyveromyces thermotolerans str...   187   5e-46
AY190718_1(AY190718|pid:none) Pagrus major proliferating cell nu...   186   1e-45
CR382122_495(CR382122|pid:none) Kluyveromyces lactis strain NRRL...   181   3e-44
AY013710_1(AY013710|pid:none) Mustela vison proliferating cell n...   181   3e-44
(P15873) RecName: Full=Proliferating cell nuclear antigen;      ...   180   6e-44
DQ647776_1(DQ647776|pid:none) Symbiodinium goreaui strain CCMP24...   179   1e-43
FJ824113_1(FJ824113|pid:none) Alligator mississippiensis prolife...   179   2e-43
DQ457003_50(DQ457003|pid:none) Plutella xylostella multiple nucl...   178   2e-43
(P11038) RecName: Full=Probable DNA polymerase sliding clamp; Al...   178   2e-43
EF134022_1(EF134022|pid:none) Prorocentrum minimum isolate P_min...   178   2e-43
CU928175_654(CU928175|pid:none) Zygosaccharomyces rouxii strain ...   176   8e-43
AY145471_47(AY145471|pid:none) Rachiplusia ou multiple nucleopol...   176   8e-43
AE017353_82(AE017353|pid:none) Cryptococcus neoformans var. neof...   175   2e-42
EF134021_1(EF134021|pid:none) Prorocentrum minimum isolate P_min...   175   2e-42
EF134023_1(EF134023|pid:none) Prorocentrum minimum isolate P_min...   174   3e-42
EF134025_1(EF134025|pid:none) Prorocentrum minimum isolate P_min...   174   5e-42
DQ239831_1(DQ239831|pid:none) Pfiesteria piscicida strain CCMP18...   173   7e-42
EF134031_1(EF134031|pid:none) Karlodinium micrum isolate Kmi-pcn...   173   7e-42
BT021268_1(BT021268|pid:none) Drosophila melanogaster RE50044 fu...   173   9e-42
EF134024_1(EF134024|pid:none) Prorocentrum minimum isolate P_min...   172   2e-41
(P31008) RecName: Full=Proliferating cell nuclear antigen;      ...   170   6e-41
EF133952_1(EF133952|pid:none) Symbiodinium goreaui clone 2 proli...   169   1e-40
EF133953_1(EF133953|pid:none) Symbiodinium goreaui clone 3 proli...   168   2e-40
DQ473295_1(DQ473295|pid:none) Sus scrofa proliferating cell nucl...   166   1e-39
AX250409_1(AX250409|pid:none) Sequence 15 from Patent WO0168863.      164   4e-39
AY221952_1(AY221952|pid:none) Ditylum brightwellii proliferating...   161   4e-38
EF602034_1(EF602034|pid:none) Phaseolus coccineus proliferating ...   155   2e-36
CR940352_413(CR940352|pid:none) Theileria annulata strain Ankara...   153   8e-36
AB118973_1(AB118973|pid:none) Lucilia sericata PCNA mRNA for pro...   149   1e-34
AK340291_1(AK340291|pid:none) Acyrthosiphon pisum ACYPI003821 mR...   147   5e-34
PQ0338(PQ0338)proliferating cell nuclear antigen (clone A-4) - c...   144   5e-33
AF416380_1(AF416380|pid:none) Ovis aries proliferating cell nucl...   139   1e-31
AX704769_1(AX704769|pid:none) Sequence 1 from Patent WO03014151.      138   3e-31
DQ647779_1(DQ647779|pid:none) Akashiwo sp. AP-LIS1 proliferating...   137   6e-31
EF133923_1(EF133923|pid:none) Akashiwo sp. AP-LIS1 clone 3 proli...   133   8e-30
EF133924_1(EF133924|pid:none) Akashiwo sp. AP-LIS1 clone 4 proli...   132   1e-29
EF133921_1(EF133921|pid:none) Akashiwo sp. AP-LIS1 clone 1 proli...   132   2e-29
EU393292_1(EU393292|pid:none) Pinus taeda isolate FBRC7 prolifer...   129   1e-28
AY345906_1(AY345906|pid:none) Pfiesteria piscicida PCNA (pcna) m...   128   3e-28
(Q84513) RecName: Full=Probable DNA polymerase sliding clamp 1; ...   127   6e-28
DQ491003_240(DQ491003|pid:none) Paramecium bursaria Chlorella vi...   127   8e-28
DQ239834_1(DQ239834|pid:none) Pfiesteria piscicida strain CCMP18...   125   2e-27
DQ491002_261(DQ491002|pid:none) Paramecium bursaria Chlorella vi...   124   5e-27
EU574929_1(EU574929|pid:none) Acanthopagrus schlegelii prolifera...   123   1e-26
EF101928_788(EF101928|pid:none) Acanthocystis turfacea Chlorella...   120   9e-26
AK300558_1(AK300558|pid:none) Homo sapiens cDNA FLJ50224 complet...   120   9e-26
CR940348_360(CR940348|pid:none) Theileria annulata strain Ankara...   117   8e-25
AY221953_1(AY221953|pid:none) Ditylum brightwellii proliferating...   114   4e-24
EU304328_113(EU304328|pid:none) Ostreococcus virus OsV5, complet...   112   2e-23
EU961522_1(EU961522|pid:none) Zea mays clone 236135 unknown mRNA.     110   6e-23
CQ887957_1(CQ887957|pid:none) Sequence 35 from Patent WO20040856...   110   7e-23
EU856391_1(EU856391|pid:none) Schmidtea mediterranea strain CIW4...   109   1e-22
DQ158856_88(DQ158856|pid:none) Bigelowiella natans nucleomorph c...   109   2e-22
AB069856_1(AB069856|pid:none) Hyphantria cunea nuclear polyhedro...   107   5e-22
DQ491002_767(DQ491002|pid:none) Paramecium bursaria Chlorella vi...   107   6e-22
(A9A2X4) RecName: Full=DNA polymerase sliding clamp; AltName: Fu...   106   1e-21
(O41056) RecName: Full=Probable DNA polymerase sliding clamp 2; ...   104   4e-21
(O10308) RecName: Full=Probable DNA polymerase sliding clamp; Al...    99   2e-19
AF512031_47(AF512031|pid:none) Choristoneura fumiferana MNPV pol...    96   2e-18
AF126735_1(AF126735|pid:none) Aureococcus anophagefferens prolif...    95   3e-18
AX885951_1(AX885951|pid:none) Sequence 1814 from Patent EP1033401.     94   5e-18
AY864330_66(AY864330|pid:none) Chrysodeixis chalcites nucleopoly...    90   1e-16
U04879_10(U04879|pid:none) Autographa californica nuclear polyhe...    89   2e-16
(A1RXU8) RecName: Full=DNA polymerase sliding clamp; AltName: Fu...    86   3e-15
EF101928_530(EF101928|pid:none) Acanthocystis turfacea Chlorella...    85   3e-15
(O27367) RecName: Full=DNA polymerase sliding clamp; AltName: Fu...    85   3e-15
EU016595_43(EU016595|pid:none) Uncultured Group I marine crenarc...    84   1e-14
(Q9UWR9) RecName: Full=DNA polymerase sliding clamp; AltName: Fu...    83   1e-14
AY310164_1(AY310164|pid:none) Homo sapiens proliferating cell nu...    82   2e-14
(O58398) RecName: Full=DNA polymerase sliding clamp; AltName: Fu...    82   2e-14
EU957903_1(EU957903|pid:none) Zea mays clone 1631757 unknown mRNA.     82   2e-14
AY310162_1(AY310162|pid:none) Homo sapiens proliferating cell nu...    82   4e-14
(Q57697) RecName: Full=DNA polymerase sliding clamp; AltName: Fu...    82   4e-14
(Q8ZTY0) RecName: Full=DNA polymerase sliding clamp A; AltName: ...    80   8e-14
(B6YVZ1) RecName: Full=DNA polymerase sliding clamp; AltName: Fu...    80   8e-14
(A6UQZ4) RecName: Full=DNA polymerase sliding clamp; AltName: Fu...    80   1e-13
(A6UUW0) RecName: Full=DNA polymerase sliding clamp; AltName: Fu...    80   1e-13
CP000504_432(CP000504|pid:none) Pyrobaculum islandicum DSM 4184,...    78   4e-13
(O73947) RecName: Full=DNA polymerase sliding clamp; AltName: Fu...    78   5e-13
CP000660_1722(CP000660|pid:none) Pyrobaculum arsenaticum DSM 135...    77   1e-12
CP000852_1349(CP000852|pid:none) Caldivirga maquilingensis IC-16...    76   2e-12
CP001014_1646(CP001014|pid:none) Thermoproteus neutrophilus V24S...    76   2e-12
(Q97Z84) RecName: Full=DNA polymerase sliding clamp C; AltName: ...    75   3e-12
EU916176_80(EU916176|pid:none) Feldmannia species virus isolate ...    74   8e-12
DQ890022_687(DQ890022|pid:none) Paramecium bursaria Chlorella vi...    73   2e-11
DQ491001_697(DQ491001|pid:none) Paramecium bursaria chlorella vi...    72   3e-11
CP001400_1043(CP001400|pid:none) Sulfolobus islandicus M.14.25, ...    72   4e-11
(Q6LWJ8) RecName: Full=DNA polymerase sliding clamp; AltName: Fu...    71   6e-11
AE017199_524(AE017199|pid:none) Nanoarchaeum equitans Kin4-M, co...    70   1e-10
CP001463_558(CP001463|pid:none) Thermococcus sibiricus MM 739, c...    67   9e-10
CP000077_763(CP000077|pid:none) Sulfolobus acidocaldarius DSM 63...    66   2e-09
(Q4JAI6) RecName: Full=DNA polymerase sliding clamp 1; AltName: ...    66   2e-09
(Q5JFD3) RecName: Full=DNA polymerase sliding clamp 2; AltName: ...    63   1e-08
GM016257_299(GM016257|pid:none) Sequence 1087 from Patent EP1923...    63   1e-08
(Q12U18) RecName: Full=DNA polymerase sliding clamp; AltName: Fu...    63   2e-08
CP000575_986(CP000575|pid:none) Staphylothermus marinus F1, comp...    62   3e-08
(Q8PX25) RecName: Full=DNA polymerase sliding clamp; AltName: Fu...    62   4e-08
(Q973F5) RecName: Full=DNA polymerase sliding clamp C; AltName: ...    62   4e-08
(Q46E39) RecName: Full=DNA polymerase sliding clamp; AltName: Fu...    62   4e-08
CP000575_630(CP000575|pid:none) Staphylothermus marinus F1, comp...    62   4e-08
(P57765) RecName: Full=DNA polymerase sliding clamp A; AltName: ...    62   4e-08
(Q9YEZ5) RecName: Full=DNA polymerase sliding clamp B2; AltName:...    60   1e-07
(Q8TUF7) RecName: Full=DNA polymerase sliding clamp; AltName: Fu...    60   1e-07
CP001399_1668(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,...    60   1e-07
CP000968_1515(CP000968|pid:none) Candidatus Korarchaeum cryptofi...    60   1e-07
J04538_1(J04538|pid:none) Rice cyclin (PCNA) gene, partial cds.        60   1e-07
(Q7T6Y0) RecName: Full=Probable DNA polymerase sliding clamp; Al...    59   3e-07
(P57763) RecName: Full=DNA polymerase sliding clamp B; AltName: ...    57   1e-06
CP000852_42(CP000852|pid:none) Caldivirga maquilingensis IC-167,...    56   2e-06
CP000493_15(CP000493|pid:none) Hyperthermus butylicus DSM 5456, ...    55   3e-06
CP000682_1770(CP000682|pid:none) Metallosphaera sedula DSM 5348,...    55   3e-06
CP001140_1181(CP001140|pid:none) Desulfurococcus kamchatkensis 1...    54   8e-06
BA000002_115(BA000002|pid:none) Aeropyrum pernix K1 DNA, complet...    53   2e-05
(Q9YFT8) RecName: Full=DNA polymerase sliding clamp A; AltName: ...    53   2e-05
(Q8TWK3) RecName: Full=DNA polymerase sliding clamp; AltName: Fu...    52   2e-05
CP000493_1235(CP000493|pid:none) Hyperthermus butylicus DSM 5456...    51   5e-05
AB002265_1(AB002265|pid:none) Bombyx mori gene for PCNA, partial...    49   3e-04
(Q5UQH4) RecName: Full=Uncharacterized protein L823;  &AY653733_...    47   0.001
AF440695_60(AF440695|pid:none) Virus PhiCh1, complete genome.          47   0.001
AY167126_3(AY167126|pid:none) Drosophila funebris RPS18 gene, pa...    47   0.001
AY167125_3(AY167125|pid:none) Drosophila erecta RPS18 gene, part...    46   0.002
AY167133_3(AY167133|pid:none) Drosophila simulans RPS18 gene, pa...    45   0.003
EU441779_1(EU441779|pid:none) Xenopus borealis clone PcnaA.a2 pr...    39   0.35
(Q9Y9V7) RecName: Full=DNA polymerase sliding clamp B1; AltName:...    36   1.8
AB306553_1(AB306553|pid:none) Closterium ehrenbergii CeRLK2 mRNA...    35   3.9
CP000498_273(CP000498|pid:none) Pichia stipitis CBS 6054 chromos...    35   5.1
CP001106_31(CP001106|pid:none) Eubacterium eligens ATCC 27750 pl...    35   5.1
CU207366_1859(CU207366|pid:none) Gramella forsetii KT0803 comple...    34   6.7

>(Q54K47) RecName: Full=Proliferating cell nuclear antigen;
           Short=PCNA;
          Length = 258

 Score =  471 bits (1211), Expect = e-131
 Identities = 245/258 (94%), Positives = 245/258 (94%)
 Frame = +3

Query: 39  MFEARLLQASLLKKILESIKDLVESANFDCSPEDISLQAMDGTHVTLINLVLRNEGFETY 218
           MFEARLLQASLLKKILESIKDLVESANFDCSPE ISLQAMDGTHVTLINLVLRNEGFETY
Sbjct: 1   MFEARLLQASLLKKILESIKDLVESANFDCSPEGISLQAMDGTHVTLINLVLRNEGFETY 60

Query: 219 NCDRXXXXXXXXXXXXKILKCAGNDDTLTIRARDNESDTVTFVFESPKNDRVSDFEIKLI 398
           NCDR            KILKCAGNDDTLTIRARDNESDTVTFVFESPKNDRVSDFEIKLI
Sbjct: 61  NCDRSLSLGLSLVSLSKILKCAGNDDTLTIRARDNESDTVTFVFESPKNDRVSDFEIKLI 120

Query: 399 DIKNEQYSIRKSDYSAVIKMPSAELQRICRDLSIIGEIVTISANKEGVKFSVSGDSGSGN 578
           DIKNEQYSIRKSDYSAVIKMPSAELQRICRDLSIIGEIVTISANKEGVKFSVSGDSGSGN
Sbjct: 121 DIKNEQYSIRKSDYSAVIKMPSAELQRICRDLSIIGEIVTISANKEGVKFSVSGDSGSGN 180

Query: 579 ITIKPTSDSDVPAEQATVIESKEPVVLNFALKFLSNFTKATPLSPMVTLSMSEGIPVVVE 758
           ITIKPTSDSDVPAEQATVIESKEPVVLNFALKFLSNFTKATPLSPMVTLSMSEGIPVVVE
Sbjct: 181 ITIKPTSDSDVPAEQATVIESKEPVVLNFALKFLSNFTKATPLSPMVTLSMSEGIPVVVE 240

Query: 759 YKIDDLGFLGFFLAPKIE 812
           YKIDDLGFLGFFLAPKIE
Sbjct: 241 YKIDDLGFLGFFLAPKIE 258

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,517,626,990
Number of extensions: 29060217
Number of successful extensions: 83549
Number of sequences better than 10.0: 221
Number of HSP's gapped: 83210
Number of HSP's successfully gapped: 222
Length of query: 324
Length of database: 1,061,185,681
Length adjustment: 129
Effective length of query: 195
Effective length of database: 639,555,889
Effective search space: 124713398355
Effective search space used: 124713398355
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.71  gvh: 0.36  alm: 0.38  top: 0.53  tms: 0.00  mit: 0.29  mip: 0.04
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 40.0 %: nuclear
	  8.0 %: cytoskeletal
	  4.0 %: extracellular, including cell wall
	  4.0 %: mitochondrial
	  4.0 %: vacuolar

>> prediction for Contig-U03566-1 is cyt
VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0