| Contig-U03511-1 |
| Contig ID |
Contig-U03511-1 |
| Contig update |
2001. 8.29 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
401 |
| Chromosome number (1..6, M) |
1 |
| Chromosome length |
4919822 |
| Start point |
4874899 |
| End point |
4874498 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
1 |
| Number of EST |
1 |
| Link to clone list |
U03511 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6. 9 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 6. 2 |
| Homology vs DNA |
|
| protein update |
2009. 7.28 |
| Homology vs Protein |
Query= Contig-U03511-1 (Contig-U03511-1Q) /CSM_Contig/Contig-U03511-1Q.Seq.d
(401 letters)
Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AP007174_123(AP007174|pid:none) Aspergillus oryzae RIB40 genomic... 89 4e-17
AM920437_1331(AM920437|pid:none) Penicillium chrysogenum Wiscons... 74 2e-12
AP007154_446(AP007154|pid:none) Aspergillus oryzae RIB40 genomic... 73 3e-12
AM270222_44(AM270222|pid:none) Aspergillus niger contig An11c005... 72 5e-12
(Q5F3Z9) RecName: Full=Zinc finger CCCH domain-containing protei... 70 2e-11
CU633901_78(CU633901|pid:none) Podospora anserina genomic DNA ch... 69 4e-11
AK050226_1(AK050226|pid:none) Mus musculus adult male liver tumo... 69 5e-11
AK006009_1(AK006009|pid:none) Mus musculus adult male testis cDN... 69 5e-11
(Q8BJ05) RecName: Full=Zinc finger CCCH domain-containing protei... 69 5e-11
(Q7TMD5) RecName: Full=Zinc finger CCCH domain-containing protei... 68 1e-10
AB032932_1(AB032932|pid:none) Rattus norvegicus mRNA for nuclear... 68 1e-10
AB097076_1(AB097076|pid:none) Rattus norvegicus ukp68* mRNA for ... 68 1e-10
AB169227_1(AB169227|pid:none) Macaca fascicularis testis cDNA, c... 66 3e-10
AK302136_1(AK302136|pid:none) Homo sapiens cDNA FLJ53396 complet... 66 3e-10
AB071047_1(AB071047|pid:none) Macaca fascicularis testis cDNA cl... 66 3e-10
(Q4R6F6) RecName: Full=Zinc finger CCCH domain-containing protei... 66 3e-10
BX248281_1(BX248281|pid:none) human full-length cDNA clone CS0DI... 66 3e-10
AF474376_1(AF474376|pid:none) Homo sapiens putative NY-REN-37 an... 66 3e-10
AF155107_1(AF155107|pid:none) Homo sapiens NY-REN-37 antigen mRN... 66 4e-10
BX248265_1(BX248265|pid:none) human full-length cDNA clone CS0DC... 66 4e-10
BC027607_1(BC027607|pid:none) Homo sapiens zinc finger CCCH-type... 66 4e-10
CR382133_390(CR382133|pid:none) Debaryomyces hansenii strain CBS... 65 6e-10
(Q08AZ1) RecName: Full=Zinc finger CCCH domain-containing protei... 65 7e-10
BC124947_1(BC124947|pid:none) Xenopus laevis Zinc finger CCCH do... 65 7e-10
(Q3ZC82) RecName: Full=Zinc finger CCCH domain-containing protei... 65 7e-10
BC102847_1(BC102847|pid:none) Bos taurus zinc finger CCCH-type c... 65 7e-10
CR859196_1(CR859196|pid:none) Pongo abelii mRNA; cDNA DKFZp459K1... 65 1e-09
BC116476_1(BC116476|pid:none) Danio rerio zinc finger CCCH-type ... 64 2e-09
CR380952_290(CR380952|pid:none) Candida glabrata strain CBS138 c... 62 6e-09
BT022081_1(BT022081|pid:none) Drosophila melanogaster SD07352 fu... 60 2e-08
AE017341_276(AE017341|pid:none) Cryptococcus neoformans var. neo... 55 6e-07
AY578063_1(AY578063|pid:none) Homo sapiens putative NY-REN-37 an... 51 1e-05
AL844505_226(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 49 5e-05
(O55741) RecName: Full=Putative zinc finger protein 132L; &AF30... 49 5e-05
CP001160_332(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 49 7e-05
AC116967_8(AC116967|pid:none) Dictyostelium discoideum chromosom... 45 0.001
FM992695_293(FM992695|pid:none) Candida dubliniensis CD36 chromo... 44 0.001
AC024843_5(AC024843|pid:none) Caenorhabditis elegans cosmid Y61A... 42 0.007
BT063643_1(BT063643|pid:none) Zea mays full-length cDNA clone ZM... 41 0.015
AY239358_1(AY239358|pid:none) Trypanosoma brucei rhodesiense cle... 41 0.015
BC091093_1(BC091093|pid:none) Xenopus tropicalis GRN protein, mR... 41 0.015
AB005242_28(AB005242|pid:none) Arabidopsis thaliana genomic DNA,... 40 0.025
(Q5NAW2) RecName: Full=Zinc finger CCCH domain-containing protei... 40 0.025
(Q8VIK5) RecName: Full=Platelet endothelial aggregation receptor... 40 0.025
AF461685_1(AF461685|pid:none) Mus musculus Jedi-736 protein mRNA... 40 0.025
AF444274_1(AF444274|pid:none) Mus musculus Jedi protein mRNA, co... 40 0.025
(A6NMK7) RecName: Full=Putative cleavage and polyadenylation spe... 40 0.033
U88173_9(U88173|pid:none) Caenorhabditis elegans cosmid F46F11, ... 40 0.033
AY669076_1(AY669076|pid:none) Trypanosoma cruzi cleavage polyade... 40 0.033
(Q94JI5) RecName: Full=Zinc finger CCCH domain-containing protei... 39 0.043
(Q5Z5Q3) RecName: Full=Zinc finger CCCH domain-containing protei... 39 0.043
AM445156_3(AM445156|pid:none) Vitis vinifera contig VV78X067066.... 39 0.057
EU971567_1(EU971567|pid:none) Zea mays clone 367249 unknown mRNA. 39 0.057
(O13713) RecName: Full=Nuclear polyadenylated RNA-binding protei... 39 0.057
EU968830_1(EU968830|pid:none) Zea mays clone 324384 zinc finger ... 39 0.057
AM269894_51(AM269894|pid:none) Eimeria tenella chromosome 1, ord... 39 0.074
AM502227_77(AM502227|pid:none) Leishmania infantum chromosome 9. 39 0.074
AL627123_1(AL627123|pid:none) Mouse DNA sequence from clone RP23... 38 0.096
CR382134_29(CR382134|pid:none) Debaryomyces hansenii strain CBS7... 38 0.096
AC018363_23(AC018363|pid:none) Arabidopsis thaliana chromosome I... 38 0.096
EU624138_1(EU624138|pid:none) Medicago sativa zinc finger protei... 38 0.096
(Q80V70) RecName: Full=Multiple epidermal growth factor-like dom... 38 0.096
(Q8GXX7) RecName: Full=Zinc finger CCCH domain-containing protei... 38 0.096
BC172774_1(BC172774|pid:none) Synthetic construct Homo sapiens c... 38 0.096
AK173032_1(AK173032|pid:none) Mus musculus mRNA for mKIAA0815 pr... 38 0.096
CP000113_1974(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 38 0.13
BT066426_1(BT066426|pid:none) Zea mays full-length cDNA clone ZM... 37 0.16
AC146552_1(AC146552|pid:none) Medicago truncatula clone mth2-9d1... 37 0.16
EU967126_1(EU967126|pid:none) Zea mays clone 299610 zinc finger ... 37 0.16
CU928175_742(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 37 0.16
(Q6DJP7) RecName: Full=Cleavage and polyadenylation specificity ... 37 0.21
AB377534_1(AB377534|pid:none) Spinacia oleracea SoCP3-41 mRNA fo... 37 0.21
CR761660_1(CR761660|pid:none) Xenopus tropicalis finished cDNA, ... 37 0.21
AC015447_17(AC015447|pid:none) Arabidopsis thaliana chromosome I... 37 0.21
AY095049_1(AY095049|pid:none) Drosophila melanogaster LD37466 fu... 37 0.21
EU964144_1(EU964144|pid:none) Zea mays clone 276186 cysteine pro... 37 0.21
FB844656_1(FB844656|pid:none) Sequence 63929 from Patent WO20080... 37 0.21
AB062684_1(AB062684|pid:none) Bombyx mori CB10 mRNA for wing dis... 37 0.21
(Q3ED78) RecName: Full=Zinc finger CCCH domain-containing protei... 37 0.21
(Q2QT65) RecName: Full=Zinc finger CCCH domain-containing protei... 37 0.28
AE014134_161(AE014134|pid:none) Drosophila melanogaster chromoso... 37 0.28
BT052964_1(BT052964|pid:none) Medicago truncatula clone MTYFL_FM... 37 0.28
BC168665_1(BC168665|pid:none) Rattus norvegicus platelet endothe... 37 0.28
U48542_1(U48542|pid:none) Mollugo verticillata ORF2280 gene homo... 37 0.28
EF576540_1(EF576540|pid:none) Oryza sativa (indica cultivar-grou... 36 0.37
BC049872_1(BC049872|pid:none) Mus musculus FAT tumor suppressor ... 36 0.37
AL669989_19(AL669989|pid:none) Neurospora crassa DNA linkage gro... 36 0.37
(P25776) RecName: Full=Oryzain alpha chain; EC=3.4.22.-... 36 0.37
(Q14517) RecName: Full=Protocadherin Fat 1; AltName: Full=Cadher... 36 0.37
CR855148_2(CR855148|pid:none) Oryza sativa genomic DNA, chromoso... 36 0.37
BC100554_1(BC100554|pid:none) Mus musculus FAT tumor suppressor ... 36 0.37
AL606452_2(AL606452|pid:none) Oryza sativa genomic DNA, chromoso... 36 0.37
AL606692_8(AL606692|pid:none) Oryza sativa genomic DNA, chromoso... 36 0.37
AL032657_4(AL032657|pid:none) Caenorhabditis elegans YAC Y47H9C,... 36 0.37
AM910994_413(AM910994|pid:none) Plasmodium knowlesi strain H chr... 36 0.48
AF366556_1(AF366556|pid:none) Oryza sativa saline responsive OSS... 36 0.48
D90407_1(D90407|pid:none) Oryza sativa Japonica Group mRNA for o... 36 0.48
AL110498_8(AL110498|pid:none) Caenorhabditis elegans YAC Y64G10A... 36 0.48
AC093384_1(AC093384|pid:none) Homo sapiens BAC clone RP11-490P22... 36 0.48
BC035009_1(BC035009|pid:none) Homo sapiens delta/notch-like EGF ... 36 0.48
AP008210_2224(AP008210|pid:none) Oryza sativa (japonica cultivar... 36 0.48
T27283(T27283)hypothetical protein Y64G10A.f - Caenorhabditis el... 36 0.48
(Q0JD07) RecName: Full=Zinc finger CCCH domain-containing protei... 36 0.48
CR855601_1(CR855601|pid:none) Xenopus tropicalis finished cDNA, ... 35 0.62
BC049953_1(BC049953|pid:none) Mus musculus zinc finger CCCH type... 35 0.62
DQ917572_1(DQ917572|pid:none) Parhyale hawaiensis notch protein ... 35 0.82
AF196571_1(AF196571|pid:none) Homo sapiens Delta-like-1 protein ... 35 0.82
AM270375_19(AM270375|pid:none) Aspergillus niger contig An16c023... 35 0.82
BC108458_1(BC108458|pid:none) Xenopus laevis hypothetical protei... 35 0.82
DQ004683_1(DQ004683|pid:none) Xenopus laevis granulin 2 mRNA, co... 35 0.82
BC073022_1(BC073022|pid:none) Xenopus laevis hypothetical protei... 35 0.82
AC148289_13(AC148289|pid:none) Medicago truncatula chromosome 7 ... 35 0.82
BC058552_1(BC058552|pid:none) Mus musculus zinc finger CCCH type... 35 0.82
BC034435_1(BC034435|pid:none) Homo sapiens zinc finger CCCH-type... 35 1.1
(O75077) RecName: Full=Disintegrin and metalloproteinase domain-... 35 1.1
AL645534_3(AL645534|pid:none) Mouse DNA sequence from clone RP23... 35 1.1
AB383769_1(AB383769|pid:none) Synthetic construct DNA, clone: pF... 35 1.1
AK034022_1(AK034022|pid:none) Mus musculus adult male diencephal... 35 1.1
AF003522_1(AF003522|pid:none) Homo sapiens Delta mRNA, complete ... 35 1.1
AL645534_2(AL645534|pid:none) Mouse DNA sequence from clone RP23... 35 1.1
AL683801_4(AL683801|pid:none) Mouse DNA sequence from clone DN-7... 35 1.1
(Q9R1V7) RecName: Full=Disintegrin and metalloproteinase domain-... 35 1.1
(P55946) RecName: Full=Metallothionein; Short=MT; 35 1.1
EF622019_1(EF622019|pid:none) Elaeis guineensis cysteine protein... 35 1.1
D63484_1(D63484|pid:none) Homo sapiens mRNA for KIAA0150 gene, p... 35 1.1
AL683801_1(AL683801|pid:none) Mouse DNA sequence from clone DN-7... 35 1.1
AK296844_1(AK296844|pid:none) Homo sapiens cDNA FLJ53382 complet... 35 1.1
EF677029_1(EF677029|pid:none) Picea sitchensis clone WS02760_G11... 34 1.4
BT063761_1(BT063761|pid:none) Zea mays full-length cDNA clone ZM... 34 1.4
T16840(T16840)hypothetical protein T10E10.4 - Caenorhabditis ele... 34 1.4
M33753_1(M33753|pid:none) D.melanogaster crumbs protein mRNA, co... 34 1.4
AY251055_1(AY251055|pid:none) Anthurium andraeanum senescence-as... 34 1.4
(P10040) RecName: Full=Protein crumbs; AltName: Full=95F; Flags:... 34 1.4
EU956916_1(EU956916|pid:none) Zea mays clone 1577403 zinc finger... 34 1.4
BT020223_1(BT020223|pid:none) Arabidopsis thaliana At5g63260 mRN... 34 1.4
(Q5RJC5) RecName: Full=Zinc finger CCCH domain-containing protei... 34 1.4
AY118509_1(AY118509|pid:none) Drosophila melanogaster LD13435 fu... 34 1.4
U39644_2(U39644|pid:none) Caenorhabditis elegans cosmid T10E10, ... 34 1.4
AP008207_900(AP008207|pid:none) Oryza sativa (japonica cultivar-... 34 1.8
A49175(A49175;PH1570;S32113) Motch B protein - mouse (fragment) ... 34 1.8
AK155137_1(AK155137|pid:none) Mus musculus NOD-derived CD11c +ve... 34 1.8
(P61134) RecName: Full=Complement component C6; Flags: Precursor... 34 1.8
AC069474_1(AC069474|pid:none) Arabidopsis thaliana chromosome 3 ... 34 1.8
AB126592_1(AB126592|pid:none) Homo sapiens C6 mRNA for complemen... 34 1.8
(Q5ZDJ6) RecName: Full=Zinc finger CCCH domain-containing protei... 34 1.8
(Q941Q3) RecName: Full=Zinc finger CCCH domain-containing protei... 34 1.8
BC172642_1(BC172642|pid:none) Synthetic construct Mus musculus c... 34 1.8
AF019147_1(AF019147|pid:none) Zea mays cysteine proteinase Mir3 ... 34 1.8
(Q04721) RecName: Full=Neurogenic locus notch homolog protein 2;... 34 1.8
(Q5NAV3) RecName: Full=Zinc finger CCCH domain-containing protei... 34 1.8
FB844668_1(FB844668|pid:none) Sequence 63941 from Patent WO20080... 34 1.8
AF399740_1(AF399740|pid:none) Helix pomatia Cd-metallothionein i... 34 1.8
BC066848_1(BC066848|pid:none) Mus musculus zinc finger CCCH type... 34 1.8
EU977051_1(EU977051|pid:none) Zea mays clone 997341 CCCH transcr... 33 2.4
AL844504_214(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 33 2.4
BT067110_1(BT067110|pid:none) Zea mays full-length cDNA clone ZM... 33 2.4
(Q9ZWA1) RecName: Full=Zinc finger CCCH domain-containing protei... 33 2.4
S57776(S57776) cysteine proteinase (EC 3.4.22.-) - clove pink (f... 33 2.4
AK078105_1(AK078105|pid:none) Mus musculus adult male medulla ob... 33 2.4
AM443467_2(AM443467|pid:none) Vitis vinifera contig VV78X277019.... 33 2.4
AK117219_1(AK117219|pid:none) Arabidopsis thaliana At1g03790 mRN... 33 2.4
BC005786_1(BC005786|pid:none) Mus musculus zinc finger CCCH type... 33 2.4
A87722(A87722)protein ZC123.1 [imported] - Caenorhabditis elegans 33 2.4
AK167700_1(AK167700|pid:none) Mus musculus 14 days pregnant adul... 33 2.4
BX890618_1(BX890618|pid:none) Zebrafish DNA sequence from clone ... 33 2.4
BX088690_1(BX088690|pid:none) Zebrafish DNA sequence from clone ... 33 2.4
T16859(T16859)hypothetical protein T13C2.5 - Caenorhabditis eleg... 33 3.1
AY525635_1(AY525635|pid:none) Meretrix lusoria metallothionein m... 33 3.1
AL391737_40(AL391737|pid:none) chromosome I of strain GB-M1 of E... 33 3.1
FN392319_32(FN392319|pid:none) Pichia pastoris GS115 chromosome ... 33 3.1
BC127413_1(BC127413|pid:none) Xenopus laevis hypothetical LOC443... 33 3.1
S59621(S59621)metallothionein isoform b, cadmium-binding - Arian... 33 3.1
BC073564_1(BC073564|pid:none) Xenopus laevis hypothetical LOC443... 33 3.1
EF147075_1(EF147075|pid:none) Populus trichocarpa clone WS01227_... 33 3.1
AF308601_1(AF308601|pid:none) Homo sapiens NOTCH 2 (N2) mRNA, co... 33 3.1
BC160681_1(BC160681|pid:none) Xenopus laevis hypothetical LOC443... 33 3.1
AX357059_1(AX357059|pid:none) Sequence 21 from Patent EP1175909.... 33 3.1
EF145111_1(EF145111|pid:none) Populus trichocarpa clone WS01120_... 33 3.1
EU643480_17(EU643480|pid:none) Adineta vaga clone Av_TEL_L_B tra... 33 3.1
CP001323_751(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 33 3.1
(Q6L4N4) RecName: Full=Zinc finger CCCH domain-containing protei... 33 4.1
BT066663_1(BT066663|pid:none) Zea mays full-length cDNA clone ZM... 33 4.1
FB844666_1(FB844666|pid:none) Sequence 63939 from Patent WO20080... 33 4.1
AB369066_1(AB369066|pid:none) Triticum aestivum mRNA for tritica... 33 4.1
(Q9Z7U0) RecName: Full=ADP,ATP carrier protein 2; AltName: Full=... 33 4.1
AB003283_1(AB003283|pid:none) Pecari tajacu gene for trappin, pa... 33 4.1
AY034179_1(AY034179|pid:none) Littorina littorea putative metall... 33 4.1
(Q9M0G2) RecName: Full=Zinc finger CCCH domain-containing protei... 33 4.1
AJ312062_1(AJ312062|pid:none) Pisum sativum partial chl24-3 gene... 33 4.1
AX235014_1(AX235014|pid:none) Sequence 17 from Patent WO0162905.... 33 4.1
(Q6AT25) RecName: Full=Zinc finger CCCH domain-containing protei... 33 4.1
AP009493_4365(AP009493|pid:none) Streptomyces griseus subsp. gri... 33 4.1
(O82307) RecName: Full=Zinc finger CCCH domain-containing protei... 32 5.3
(P57999) RecName: Full=Zonadhesin; Flags: Fragment; &AF244982_1... 32 5.3
AK292509_1(AK292509|pid:none) Homo sapiens cDNA FLJ78071 complet... 32 5.3
AF308602_1(AF308602|pid:none) Homo sapiens NOTCH 1 (N1) mRNA, co... 32 5.3
DQ480752_1(DQ480752|pid:none) Rattus norvegicus clone WZH27 unkn... 32 5.3
U81238_1(U81238|pid:none) Arabidopsis thaliana putative Cys3His ... 32 5.3
AL035436_2(AL035436|pid:none) Drosophila melanogaster cosmid clo... 32 5.3
CP000471_3669(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 32 5.3
AP003451_18(AP003451|pid:none) Oryza sativa Japonica Group genom... 32 5.3
AJ275213_1(AJ275213|pid:none) Homo sapiens mRNA for stabilin-1 (... 30 6.0
AB052956_1(AB052956|pid:none) Homo sapiens mRNA for FELE-1, comp... 30 6.0
DQ786774_1(DQ786774|pid:none) Homo sapiens FEX1 mRNA, complete c... 30 6.0
(O00468) RecName: Full=Agrin; Flags: Precursor; &AB191264_1(AB1... 32 6.9
AF016903_1(AF016903|pid:none) Homo sapiens agrin precursor mRNA,... 32 6.9
AF033110_1(AF033110|pid:none) Xenopus laevis frizzled-8 (xfz8) m... 32 6.9
(P84811) RecName: Full=Perlwapin; 32 6.9
AE014296_356(AE014296|pid:none) Drosophila melanogaster chromoso... 32 6.9
CU638744_17(CU638744|pid:none) Podospora anserina genomic DNA ch... 32 6.9
BC169947_1(BC169947|pid:none) Xenopus laevis frizzled-8, mRNA (c... 32 6.9
CP000251_2404(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 32 6.9
BC145886_1(BC145886|pid:none) Mus musculus sushi, nidogen and EG... 32 6.9
AK303252_1(AK303252|pid:none) Homo sapiens cDNA FLJ61754 complet... 32 6.9
(O74823) RecName: Full=Zinc finger CCCH domain-containing protei... 32 6.9
CP000896_899(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 32 6.9
BC019429_1(BC019429|pid:none) Mus musculus cDNA clone MGC:30371 ... 32 6.9
BC048892_1(BC048892|pid:none) Danio rerio protein phosphatase 1,... 32 6.9
(Q70E20) RecName: Full=Sushi, nidogen and EGF-like domain-contai... 32 6.9
AC151527_6(AC151527|pid:none) Medicago truncatula clone mth2-135... 32 6.9
(A6QQJ8) RecName: Full=Ribonuclease ZC3H12A; EC=3.1.-.-... 32 6.9
(Q5D1E8) RecName: Full=Ribonuclease ZC3H12A; EC=3.1.-.-... 32 6.9
AM746676_2300(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 32 9.0
AP003573_12(AP003573|pid:none) Oryza sativa Japonica Group genom... 32 9.0
(Q0J952) RecName: Full=Zinc finger CCCH domain-containing protei... 32 9.0
BC006817_1(BC006817|pid:none) Mus musculus zinc finger CCCH type... 32 9.0
AK152196_1(AK152196|pid:none) Mus musculus bone marrow macrophag... 32 9.0
(O00548) RecName: Full=Delta-like protein 1; AltName: Full=Droso... 32 9.0
AB079253_1(AB079253|pid:none) Dictyostelium discoideum Dd-gdcA m... 32 9.0
AY920404_1(AY920404|pid:none) Mus musculus MCP-1 treatment-induc... 32 9.0
M57889_1(M57889|pid:none) Drosophila melanogaster suppressor of ... 32 9.0
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor; &AC11568... 32 9.0
AF036904_1(AF036904|pid:none) Perna viridis metallothionein mRNA... 32 9.0
AE014187_548(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 32 9.0
AE014185_81(AE014185|pid:none) Plasmodium falciparum 3D7 chromos... 32 9.0
(O57409) RecName: Full=Delta-like protein B; Short=Delt... 32 9.0
AK149698_1(AK149698|pid:none) Mus musculus bone marrow macrophag... 32 9.0
BT075051_1(BT075051|pid:none) Osmerus mordax clone omor-rgc-518-... 32 9.0
(A0JPN4) RecName: Full=Ribonuclease ZC3H12A; EC=3.1.-.-... 32 9.0
EU965399_1(EU965399|pid:none) Zea mays clone 285780 zinc finger ... 32 9.0
AK289553_1(AK289553|pid:none) Homo sapiens cDNA FLJ76207 complet... 32 9.0
>AP007174_123(AP007174|pid:none) Aspergillus oryzae RIB40 genomic
DNA, SC103.
Length = 235
Score = 89.4 bits (220), Expect = 4e-17
Identities = 48/131 (36%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Frame = +1
Query: 4 KCLYIHPSI-PCKFGINCTNVDCVYNHPQRPTAPVATPPAMNEIPCRNGFACPNKKTGCG 180
+C Y HP PC++G CTN +C + HP+ CRNG C +K GC
Sbjct: 85 ECKYSHPDAEPCRYGAGCTNSNCRFRHPKSRL-------------CRNGAGC--RKLGCT 129
Query: 181 FYHP-PPACKFGTSCNMGKACPFGHGK--PCLYGLNCVTPNCTFAHHSVEQPIPDCKFGK 351
F HP P C++G C C F H C G NC+ C F H V+ C+FG
Sbjct: 130 FAHPEAPDCRYGVGCT-NTLCSFKHPSVPACRDGANCMVDKCKFFHPEVK----PCRFGT 184
Query: 352 ECTNPKCKFNH 384
CTN C F H
Sbjct: 185 RCTNKNCTFRH 195
Score = 53.1 bits (126), Expect = 3e-06
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Frame = +1
Query: 7 CLYIHPSIP-CKFGINCTNVDCVYNHPQRPTAPVATPPAMNEI--------PCRNGFACP 159
C + HP P C++G+ CTN C + HP P +++ PCR G C
Sbjct: 128 CTFAHPEAPDCRYGVGCTNTLCSFKHPSVPACRDGANCMVDKCKFFHPEVKPCRFGTRCT 187
Query: 160 NKKTGCGFYHPPP 198
NK C F HPPP
Sbjct: 188 NK--NCTFRHPPP 198
Score = 47.0 bits (110), Expect = 2e-04
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = +1
Query: 1 DKCLYIHPSI-PCKFGINCTNVDCVYNHPQRP--TAPVATPPAMNE 129
DKC + HP + PC+FG CTN +C + HP P P A+ +M++
Sbjct: 168 DKCKFFHPEVKPCRFGTRCTNKNCTFRHPPPPYTKEPTASAKSMDD 213
Score = 37.7 bits (86), Expect = 0.13
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 262 CLYGLNCVTPNCTFAHHSVEQPIPDCKFGKECTNPKCKFNHTEQR 396
C G C C ++H E C++G CTN C+F H + R
Sbjct: 75 CRNGAGCRVIECKYSHPDAEP----CRYGAGCTNSNCRFRHPKSR 115
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 828,322,921
Number of extensions: 20476756
Number of successful extensions: 46693
Number of sequences better than 10.0: 241
Number of HSP's gapped: 46163
Number of HSP's successfully gapped: 352
Length of query: 133
Length of database: 1,061,185,681
Length adjustment: 98
Effective length of query: 35
Effective length of database: 740,877,777
Effective search space: 25930722195
Effective search space used: 25930722195
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
1 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |