>Contig-U00783-1 (Contig-U00783-1Q) /CSM_Contig/Contig-U00783-1Q.Seq.d
TTTTATGATGCTGGAGAAAGATCAAGGCAATTATTTGAAAATATTTCTCA
TATTAATCANGTTTCATTAGTTTTATTAATATTAAATATAGATCTAAATA
AAACATCACCAACAATAAACTTAATTGGCGAAAAAACATTTGGAGATTTA
AAAAATTATTGNTCTTTTAATATTGATTTTCAAGATATTAATGGAAATAA
AATCAAAGAGTCAGAANTAAAGAAAAAACCATTATTAATAATTGATGGGA
AATCAGTTTCAAGATCATTTATAAAATATGTTGGATTTGAAAATAATACT
TTATGTAATAAAAAATTAATATCAATTAATAATTTATTATTCAAAGATTG
GAGTTCAACATTAGTATTTTCAAATTCATTACTAANATAAACCTTATCAT
TCTTTAGATTTTTATTTTTCATCAATAAC----------CAGCGATGATT
TAGTAACAAAAAATAATAAAATTCATAAATTTGATAGAGGTGATTTGATT
AAAAAAATAATTGTTCCAGTTTTGATTTGTTCAATTACAATTTCTATATT
TATTTTGGTGGCCATTTTTAGGAAAAATATTAAATTGTATTTTGAAAATC
TTAAATCTCCAAATAATGGTAATGTTAGTAACAATAGTATAAATAACAAT
AATAATGTAAATGGTAATTATTTATCAGATATAATAGAATACGAATATGG
AGAATCAGTTGAAGGATTATTCTCTAATCAAACATCGTGTGATAATCCTC
ATACATGTCCATCAAGTTCAAGCCATATCGATCATATTTGCTGTGCTTGA
TAAAAATAACGGATGCTCCAGAATTAGATAATAATGTTTAAAAATAAAAA
TTATATTATTCATTTTAATTTA

est1=CFE579F,1,430
est2=CFE579Z,431,1041
est3=SSM523E,649,1082

fmmlekdqgnylkiflilixfh*fy*y*i*i*ikhhqq*t*lakkhlei*kiixllilif
kilmeiksksqx*rknhy**lmgnqfqdhl*nmldlkiilyvikn*yqliiyyskigvqh
*yfqihy*XKPYHSLDFYFSSI---

---SDDLVTKNNKIHKFDRGDLIKKIIVPVLICSITISIFILVAIFRKNIKLYFENLKSP
NNGNVSNNSINNNNNVNGNYLSDIIEYEYGESVEGLFSNQTSCDNPHTCPSSSSHIDHIC
CA**k*rmlqn*iimfknknyiihfnl

Frame A:
fydagersrqlfenishinxvslvllilnidlnktsptinligektfgdlknyxsfnidf
qdingnkikesexkkkplliidgksvsrsfikyvgfenntlcnkklisinnllfkdwsst
lvfsnsllx*tlsffrflffinn---

---qr*fsnkk**ns*i**r*fd*knncssfdlfnynfyiyfgghf*eky*ivf*ks*is
k*w*c**q*yk*q**ckw*lfirynririwris*riil*sniv**ssymsikfkpyrsyl
lclikitdapeldnnv*k*klyysf*f

Frame B:
fmmlekdqgnylkiflilixfh*fy*y*i*i*ikhhqq*t*lakkhlei*kiixllilif
kilmeiksksqx*rknhy**lmgnqfqdhl*nmldlkiilyvikn*yqliiyyskigvqh
*yfqihy*XKPYHSLDFYFSSI---

---SDDLVTKNNKIHKFDRGDLIKKIIVPVLICSITISIFILVAIFRKNIKLYFENLKSP
NNGNVSNNSINNNNNVNGNYLSDIIEYEYGESVEGLFSNQTSCDNPHTCPSSSSHIDHIC
CA**k*rmlqn*iimfknknyiihfnl

Frame C:
l*cwrkikaii*kyfsy*sxfisfinikyrsk*nitnnklnwrkniwrfkkllxf*y*fs
ry*wk*nqrvrxkektiinn*weisfkiiykicwi*k*yfm**kinin**fiiqrlefni
sifkfitxinliil*ififhq*---

---ami**qkiikfinlievi*lkk*lfqf*fvqlqflylfwwpflgkilncilkilnlq
imvmlvtiv*itiim*mviiyqi**ntnmenqlkdyslikhrviilihvhqvqaisiifa
vldknngcsrir**clkikiilfili

Query= Contig-U00783-1 (Contig-U00783-1Q)
/CSM_Contig/Contig-U00783-1Q.Seq.d
         (872 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U00783-1 (Contig-U00783-1Q) /CSM_Contig/Conti...  1604  0.0
Contig-U11162-1 (Contig-U11162-1Q) /CSM_Contig/Conti...    60  6e-09
Contig-U02008-1 (Contig-U02008-1Q) /CSM_Contig/Conti...    48  2e-05
Contig-U15786-1 (Contig-U15786-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U06812-1 (Contig-U06812-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U15766-1 (Contig-U15766-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U15558-1 (Contig-U15558-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U12948-1 (Contig-U12948-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U07029-1 (Contig-U07029-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U06262-1 (Contig-U06262-1Q) /CSM_Contig/Conti...    40  0.006

>Contig-U00783-1 (Contig-U00783-1Q) /CSM_Contig/Contig-U00783-1Q.Seq.d
          Length = 872

 Score = 1604 bits (809), Expect = 0.0
 Identities = 865/872 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttttatgatgctggagaaagatcaaggcaattatttgaaaatatttctcatattaatcan 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttttatgatgctggagaaagatcaaggcaattatttgaaaatatttctcatattaatcan 60

                                                                       
Query: 61  gtttcattagttttattaatattaaatatagatctaaataaaacatcaccaacaataaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtttcattagttttattaatattaaatatagatctaaataaaacatcaccaacaataaac 120

                                                                       
Query: 121 ttaattggcgaaaaaacatttggagatttaaaaaattattgntcttttaatattgatttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaattggcgaaaaaacatttggagatttaaaaaattattgntcttttaatattgatttt 180

                                                                       
Query: 181 caagatattaatggaaataaaatcaaagagtcagaantaaagaaaaaaccattattaata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caagatattaatggaaataaaatcaaagagtcagaantaaagaaaaaaccattattaata 240

                                                                       
Query: 241 attgatgggaaatcagtttcaagatcatttataaaatatgttggatttgaaaataatact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attgatgggaaatcagtttcaagatcatttataaaatatgttggatttgaaaataatact 300

                                                                       
Query: 301 ttatgtaataaaaaattaatatcaattaataatttattattcaaagattggagttcaaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttatgtaataaaaaattaatatcaattaataatttattattcaaagattggagttcaaca 360

                                                                       
Query: 361 ttagtattttcaaattcattactaanataaaccttatcattctttagatttttatttttc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttagtattttcaaattcattactaanataaaccttatcattctttagatttttatttttc 420

                                                                       
Query: 421 atcaataacnnnnnnnnnncagcgatgatttagtaacaaaaaataataaaattcataaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcaataacnnnnnnnnnncagcgatgatttagtaacaaaaaataataaaattcataaat 480

                                                                       
Query: 481 ttgatagaggtgatttgattnnnnnnntaattgttccagttttgatttgttcaattacaa 540
           ||||||||||||||||||||       |||||||||||||||||||||||||||||||||
Sbjct: 481 ttgatagaggtgatttgattaaaaaaataattgttccagttttgatttgttcaattacaa 540

                                                                       
Query: 541 tttctatatttattttggtggccatttttaggaaaaatattaaattgtattttgaaaatc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttctatatttattttggtggccatttttaggaaaaatattaaattgtattttgaaaatc 600

                                                                       
Query: 601 ttaaatctccaaataatggtaatgttagtaacaatagtataaataacaataataatgtaa 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttaaatctccaaataatggtaatgttagtaacaatagtataaataacaataataatgtaa 660

                                                                       
Query: 661 atggtaattatttatcagatataatagaatacgaatatggagaatcagttgaaggattat 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atggtaattatttatcagatataatagaatacgaatatggagaatcagttgaaggattat 720

                                                                       
Query: 721 tctctaatcaaacatcgtgtgataatcctcatacatgtccatcaagttcaagccatatcg 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tctctaatcaaacatcgtgtgataatcctcatacatgtccatcaagttcaagccatatcg 780

                                                                       
Query: 781 atcatatttgctgtgcttgataaaaataacggatgctccagaattagataataatgttta 840
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 atcatatttgctgtgcttgataaaaataacggatgctccagaattagataataatgttta 840

                                           
Query: 841 aaaataaaaattatattattcattttaattta 872
           ||||||||||||||||||||||||||||||||
Sbjct: 841 aaaataaaaattatattattcattttaattta 872


>Contig-U11162-1 (Contig-U11162-1Q) /CSM_Contig/Contig-U11162-1Q.Seq.d
          Length = 1342

 Score = 60.0 bits (30), Expect = 6e-09
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 629 taacaatagtataaataacaataataatgtaaat 662
           |||||||||||||||||||||||||||| |||||
Sbjct: 285 taacaatagtataaataacaataataatataaat 318


 Score = 52.0 bits (26), Expect = 1e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 629 taacaatagtataaataacaataata 654
           ||||||||||||||||||||||||||
Sbjct: 93  taacaatagtataaataacaataata 118


 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 629 taacaatagtataaataacaataata 654
           |||||||| |||||||||||||||||
Sbjct: 108 taacaataatataaataacaataata 133


 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 629 taacaatagtataaataacaataata 654
           |||||||| |||||||||||||||||
Sbjct: 138 taacaataatataaataacaataata 163


 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 629 taacaatagtataaataacaataata 654
           |||||||| |||||||||||||||||
Sbjct: 123 taacaataatataaataacaataata 148


 Score = 38.2 bits (19), Expect = 0.022
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 629 taacaatagtataaataacaata 651
           |||||||| ||||||||||||||
Sbjct: 270 taacaataatataaataacaata 292


 Score = 38.2 bits (19), Expect = 0.022
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 632 caatagtataaataacaataata 654
           ||||| |||||||||||||||||
Sbjct: 258 caataatataaataacaataata 280


 Score = 32.2 bits (16), Expect = 1.4
 Identities = 22/24 (91%)
 Strand = Plus / Plus

                                   
Query: 633 aatagtataaataacaataataat 656
           |||| |||||| ||||||||||||
Sbjct: 352 aataatataaacaacaataataat 375


 Score = 32.2 bits (16), Expect = 1.4
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                               
Query: 632 caatagtataaataacaata 651
           ||||| ||||||||||||||
Sbjct: 81  caataatataaataacaata 100


>Contig-U02008-1 (Contig-U02008-1Q) /CSM_Contig/Contig-U02008-1Q.Seq.d
          Length = 733

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 837 tttaaaaataaaaattatattatt 860
           ||||||||||||||||||||||||
Sbjct: 543 tttaaaaataaaaattatattatt 520


  Database: CSM
    Posted date:  Jun 21, 2004 12:56 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 47,650
Number of Sequences: 8402
Number of extensions: 47650
Number of successful extensions: 6749
Number of sequences better than 10.0: 911
length of query: 872
length of database: 8,075,542
effective HSP length: 16
effective length of query: 856
effective length of database: 7,941,110
effective search space: 6797590160
effective search space used: 6797590160
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U00783-1 (Contig-U00783-1Q) /CSM_Contig/Contig-U00783-1Q.Seq.d
         (872 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...   714   0.0    7
(BJ358688) Dictyostelium discoideum cDNA clone:ddc10m19, 5' ...   827   0.0    1
(C93284) Dictyostelium discoideum slug cDNA, clone SSM523.        240   e-172  5
(BJ372014) Dictyostelium discoideum cDNA clone:ddc10m19, 3' ...   260   e-117  3
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214...    36   6e-08  12
(AF165818) Guillardia theta nucleomorph chromosome 1, comple...    34   2e-07  17
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s...    44   3e-07  13
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome.       38   6e-07  16
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    40   6e-07  12
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi...    36   7e-07  16
(FB571381) Sequence 248 from Patent EP1865317.                     38   7e-07  10
(FB571325) Sequence 192 from Patent EP1865317.                     38   7e-07  10
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    38   1e-06  15
(AL844509) Plasmodium falciparum chromosome 13.                    40   2e-06  13
(EU028329) Glycine max clone BAC gmw1-24M16 genomic sequence.      44   3e-06  10
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s...    42   3e-06  16
(AF250284) Amsacta moorei entomopoxvirus, complete genome.         40   4e-06  19
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g...    42   4e-06  14
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    36   4e-06  15
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1...    36   3e-05  13
(AL844506) Plasmodium falciparum chromosome  7.                    46   3e-05  17
(CP001158) Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisu...    38   3e-05  19
(BA000016) Clostridium perfringens str. 13 DNA, complete gen...    38   3e-05  18
(AF442957) Ostrinia nubilalis mitochondrion, complete genome.      40   5e-05  5
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699...    38   5e-05  15
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...    38   8e-05  15
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117...    48   9e-05  10
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7...    32   1e-04  15
(AE014843) Plasmodium falciparum 3D7 chromosome 11 section 8...    36   1e-04  14
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5...    42   1e-04  12
(AL929354) Plasmodium falciparum strain 3D7, chromosome 5, s...    38   1e-04  14
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771...    36   2e-04  7
(AE014824) Plasmodium falciparum 3D7 chromosome 14 section 9...    38   2e-04  14
(AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3...    34   2e-04  14
(CP000246) Clostridium perfringens ATCC 13124, complete genome.    38   2e-04  19
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-...    36   2e-04  13
(CP001161) Buchnera aphidicola str. 5A (Acyrthosiphon pisum)...    38   2e-04  19
(DQ927304) Tetrahymena paravorax strain RP mitochondrion, co...    40   2e-04  6
(DD061484) Methods and nucleic acids for the analysis of  he...    40   3e-04  7
(AX599046) Sequence 386 from Patent WO02077272.                    40   3e-04  7
(BD061520) Genome DNA of symbiotic bacteria of aphid.              38   3e-04  18
(AR409405) Sequence 1 from patent US 6632935.                      38   3e-04  18
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum...    38   3e-04  18
(CP000312) Clostridium perfringens SM101, complete genome.         36   3e-04  19
(AM180355) Clostridium difficile 630 complete genome.              46   3e-04  15
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome.         34   6e-04  17
(AF538053) Monosiga brevicollis mitochondrion, complete genome.    36   6e-04  9
(ET071888) QM0AAA6AF10FM1 CCL1 Citrus clementina genomic clo...    50   6e-04  3
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    38   7e-04  15
(AJ235271) Rickettsia prowazekii strain Madrid E, complete g...    32   7e-04  13
(CP000728) Clostridium botulinum F str. Langeland, complete ...    40   8e-04  17
(GC698458) Sequence 13703 from patent US 6812339.                  44   9e-04  7
(DD010735) Diagnosis of known genetic Parameters within the ...    40   0.001  12
(AL109814) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    38   0.001  10
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s...    34   0.002  16
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6...    34   0.002  14
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet...    40   0.002  16
(AJ011856) Saccharomyces cerevisiae complete mitochondrial g...    34   0.002  10
(AC187774) Trichinella spiralis BAC clone TS195-13H12 from c...    40   0.002  9
(CR382399) Plasmodium falciparum chromosome 6, complete sequ...    34   0.002  13
(AP006628) Onion yellows phytoplasma OY-M DNA, complete genome.    34   0.002  21
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423...    36   0.002  16
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1...    34   0.002  15
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124...    36   0.002  12
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255...    36   0.002  17
(EU004203) Saccharomyces cerevisiae YJM789 mitochondrion, co...    34   0.002  11
(AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7...    32   0.002  15
(CP000049) Borrelia turicatae 91E135, complete genome.             34   0.003  19
(AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5...    40   0.003  16
(AX344559) Sequence 10 from Patent WO0200932.                      34   0.003  15
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome.         38   0.003  18
(AC187278) Medicago truncatula chromosome 8 clone mth2-189b1...    34   0.003  8
(AX346201) Sequence 1272 from Patent WO0200928.                    42   0.003  5
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    40   0.004  13
(AE017263) Mesoplasma florum L1 complete genome.                   34   0.004  18
(EF621724) Papilio xuthus mitochondrion, partial genome.           40   0.004  4
(AG376784) Mus musculus molossinus DNA, clone:MSMg01-184I09....    32   0.004  4
(CP000678) Methanobrevibacter smithii ATCC 35061, complete g...    36   0.004  20
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643...    34   0.004  12
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    36   0.004  14
(AE014827) Plasmodium falciparum 3D7 chromosome 14 section 1...    36   0.004  11
(CP000361) Arcobacter butzleri RM4018, complete genome.            36   0.005  20
(CU694785) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   0.005  7
(AL157783) Human DNA sequence from clone RP11-134A8 on chrom...    44   0.005  7
(CP000013) Borrelia garinii PBi, complete genome.                  34   0.005  20
(AE016826) Buchnera aphidicola str. Bp (Baizongia pistaciae)...    34   0.005  15
(DQ158856) Bigelowiella natans nucleomorph chromosome 1, com...    34   0.006  12
(FB571359) Sequence 226 from Patent EP1865317.                     38   0.006  11
(FB571303) Sequence 170 from Patent EP1865317.                     38   0.006  11
(AC233100) Medicago truncatula clone mth2-132a8, WORKING DRA...    34   0.006  11
(AE014841) Plasmodium falciparum 3D7 chromosome 11 section 6...    32   0.007  13
(AX392737) Sequence 27 from Patent WO0212526.                      40   0.007  7
(AR707084) Sequence 27 from patent US 6933145.                     40   0.007  7
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen...    44   0.008  13
(AC006279) Plasmodium falciparum chromosome 12 clone PFYAC61...    36   0.008  12
(CS468878) Sequence 69 from Patent EP1748080.                      34   0.008  14
(CS419355) Sequence 69 from Patent WO2006094836.                   34   0.008  14
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    38   0.008  11
(AM458799) Vitis vinifera contig VV78X274141.2, whole genome...    54   0.009  1
(AM433540) Vitis vinifera contig VV78X109716.9, whole genome...    54   0.009  1
(BG620668) 602619553F1 NIH_MGC_79 Homo sapiens cDNA clone IM...    54   0.009  1
(AL844507) Plasmodium falciparum chromosome 8.                     36   0.010  15
(DD010736) Diagnosis of known genetic Parameters within the ...    38   0.010  11
(AX392736) Sequence 26 from Patent WO0212526.                      32   0.010  9
(AR707083) Sequence 26 from patent US 6933145.                     32   0.010  9
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    32   0.011  12
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    38   0.011  16
(AX344565) Sequence 16 from Patent WO0200932.                      32   0.012  14
(AE014846) Plasmodium falciparum 3D7 chromosome 12, section ...    30   0.012  14
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    32   0.012  14
(AX347076) Sequence 2147 from Patent WO0200928.                    36   0.012  10
(DQ832717) Phytophthora sojae mitochondrion, complete genome.      34   0.012  9
(CP000382) Clostridium novyi NT, complete genome.                  36   0.013  17
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595...    36   0.013  9
(AP008126) Lotus japonicus genomic DNA, chromosome 6, clone:...    42   0.013  7
(CR548612) Paramecium tetraurelia macronuclear largest chrom...    40   0.013  16
(CP000087) Rickettsia bellii RML369-C, complete genome.            36   0.014  20
(AF467260) Ostrinia furnacalis mitochondrion, complete genome.     40   0.014  4
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69...    38   0.015  11
(AC216689) Populus trichocarpa clone POP101-J02, complete se...    38   0.015  6
(AX344569) Sequence 20 from Patent WO0200932.                      36   0.017  11
(AE017308) Mycoplasma mobile 163K complete genome.                 36   0.017  19
(AM466767) Vitis vinifera contig VV78X001893.3, whole genome...    52   0.018  2
(X95276) Plasmodium falciparum complete gene map of plastid-...    30   0.018  6
(AM434497) Vitis vinifera contig VV78X071835.12, whole genom...    36   0.018  8
(AL929355) Plasmodium falciparum strain 3D7, chromosome 9; s...    36   0.018  14
(EU401918) Bombus hypocrita sapporoensis mitochondrion, part...    30   0.020  7
(CR382398) Plasmodium falciparum chromosome 6, complete sequ...    40   0.021  15
(AC184063) Populus trichocarpa clone Pop1-108K13, complete s...    36   0.023  6
(AC226823) Solanum lycopersicum chromosome 5 clone C05HBa006...    32   0.023  10
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975...    34   0.025  9
(CP000881) Hemiselmis andersenii chromosome 1, complete sequ...    32   0.026  13
(AL035475) Plasmodium falciparum MAL4P2.                           32   0.027  13
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2...    32   0.028  16
(AY863213) Smittium culisetae mitochondrion, complete genome.      30   0.029  10
(AP009049) Clostridium kluyveri NBRC 12016 DNA, complete gen...    44   0.029  18
(AE014845) Plasmodium falciparum 3D7 chromosome 12, section ...    32   0.029  14
(CP000743) Methanococcus aeolicus Nankai-3, complete genome.       34   0.031  13
(AF030694) Plasmodium falciparum strain Dd2 heat shock prote...    46   0.031  5
(AX344566) Sequence 17 from Patent WO0200932.                      36   0.031  14
(AC214592) Populus trichocarpa clone POP002-I03, complete se...    34   0.032  9
(AE015927) Clostridium tetani E88, complete genome.                38   0.034  14
(AC005506) Plasmodium falciparum chromosome 12 clone PFYAC35...    38   0.035  14
(CP000673) Clostridium kluyveri DSM 555, complete genome.          44   0.036  18
(AM463647) Vitis vinifera contig VV78X107456.10, whole genom...    52   0.037  1
(CS468877) Sequence 68 from Patent EP1748080.                      34   0.037  13
(CS419354) Sequence 68 from Patent WO2006094836.                   34   0.037  13
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572...    34   0.037  11
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098...    32   0.037  11
(X65223) T.rubrum mitochondrion genes for cytochrome oxidase...    36   0.040  4
(AC149486) Populus trichocarpa clone Pop1-8L22, complete seq...    34   0.041  8
(Z98547) Plasmodium falciparum MAL3P3.                             32   0.042  10
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ...    34   0.042  16
(FJ546412) Syntrichia ruralis chloroplast, complete genome.        32   0.043  8
(AC115584) Dictyostelium discoideum chromosome 2 map complem...    42   0.044  6
(AG311154) Mus musculus molossinus DNA, clone:MSMg01-093N01....    44   0.046  2
(AE014839) Plasmodium falciparum 3D7 chromosome 11 section 4...    32   0.046  13
(AE014816) Plasmodium falciparum 3D7 chromosome 14 section 1...    32   0.046  13
(AX344574) Sequence 25 from Patent WO0200932.                      38   0.046  11
(AE016821) Ashbya gossypii (= Eremothecium gossypii) ATCC 10...    36   0.047  6
(CR936247) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   0.049  8
(CP001056) Clostridium botulinum B str. Eklund 17B, complete...    42   0.049  13
(AL121821) Human chromosome 14 DNA sequence BAC C-2298J14 of...    32   0.053  8
(FG072732) UI-FF-IF0-aam-j-22-0-UI.r1 Ceratitis capitata emb...    36   0.054  3
(AC222736) Bos taurus clone CH240-440P2, WORKING DRAFT SEQUE...    34   0.056  5
(AL844501) Plasmodium falciparum strain 3D7, chromosome 1.         40   0.057  14
(BD460438) Diagnosis of Diseases Associated with Cell Cycle.       38   0.057  4
(BD452360) Diagnosis of Diseases Associated with Cell Cycle.       38   0.057  4
(AX348759) Sequence 217 from Patent WO0202807.                     38   0.057  4
(AX344366) Sequence 213 from Patent WO0200926.                     38   0.057  4
(AX251974) Sequence 235 from Patent WO0168911.                     38   0.057  4
(AX344564) Sequence 15 from Patent WO0200932.                      34   0.058  15
(AX344551) Sequence 2 from Patent WO0200932.                       34   0.058  15
(CU062421) M.truncatula DNA sequence from clone MTH2-105J18 ...    36   0.058  7
(AC092944) Homo sapiens 3 BAC RP11-550I24 (Roswell Park Canc...    38   0.059  6
(AX344506) Sequence 353 from Patent WO0200926.                     32   0.060  8
(AL034556) Plasmodium falciparum MAL3P5.                           32   0.060  8
(AL049185) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    34   0.063  14
(AB367651) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367650) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367649) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367648) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367647) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367646) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367645) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367644) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367643) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367641) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367640) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367639) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367638) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367637) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367636) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367635) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367634) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367633) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367615) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(AB367614) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.065  4
(CR936407) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    40   0.066  7
(AC116925) Dictyostelium discoideum chromosome 2 map 4189423...    32   0.070  8
(AM488622) Vitis vinifera, whole genome shotgun sequence, co...    32   0.070  7
(CU179680) Mycoplasma agalactiae PG2 chromosome, complete se...    36   0.072  19
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    34   0.072  16
(AB177484) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.074  4
(AB177482) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.074  4
(AB177481) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.074  4
(AB177479) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.074  4
(AB177473) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.074  4
(AB177471) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.074  4
(CU468277) M.truncatula DNA sequence *** SEQUENCING CANCELLE...    40   0.074  8
(AC025757) Homo sapiens chromosome 5 clone CTD-2195H9, compl...    36   0.075  8
(AB075955) Ixodes holocyclus mitochondrial DNA, complete seq...    40   0.076  6
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s...    42   0.077  16
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet...    36   0.078  16
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135...    38   0.079  8
(CU302301) Zebrafish DNA sequence from clone CH211-178D20 in...    36   0.079  7
(AM450609) Vitis vinifera contig VV78X048548.7, whole genome...    46   0.082  3
(AX344573) Sequence 24 from Patent WO0200932.                      32   0.085  14
(AE014829) Plasmodium falciparum 3D7 chromosome 10 section 1...    36   0.086  2
(AX347340) Sequence 2411 from Patent WO0200928.                    36   0.087  4
(BB897832) Macaca fascicularis cDNA clone: Qlv-U204A-B4, 3'e...    32   0.088  4
(ET071868) QM0AAA6AE10FM1 CCL1 Citrus clementina genomic clo...    46   0.089  2
(AY048187) Bombyx mori strain Xiafang mitochondrion, complet...    40   0.089  5
(FJ384796) Bombyx mandarina strain Qingzhou mitochondrion, c...    40   0.090  5
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s...    38   0.090  14
(AE014826) Plasmodium falciparum 3D7 chromosome 14 section 1...    34   0.091  11
(AY531391) Schizaphis graminum mitochondrion, complete genome.     32   0.092  6
(CU326372) S.lycopersicum DNA sequence from clone SL_MboI-30...    38   0.093  9
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-...    34   0.094  10
(CU459182) Zebrafish DNA sequence from clone CH211-108I17 in...    34   0.095  8
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041...    34   0.095  12
(AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3...    34   0.096  11
(AF081585) Dictyostelium discoideum developmental protein DG...    40   0.100  2
(AC084807) Arabidopsis thaliana chromosome 1 BAC T18F15 geno...    50   0.100  4
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8...    36   0.10   10
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    34   0.10   17
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com...    34   0.10   17
(BD428844) Method and nucleic acids for pharmacogenomic meth...    38   0.10   5
(AX348323) Sequence 18 from Patent WO0202806.                      38   0.10   5
(AX345121) Sequence 192 from Patent WO0200928.                     38   0.10   5
(AC216671) Populus trichocarpa clone POP018-E21, complete se...    32   0.10   10
(AC005308) Plasmodium falciparum chromosome 12 clone PFYAC49...    30   0.10   12
(AF303741) Chilo iridescent virus complete genome.                 34   0.10   9
(AC216600) Populus trichocarpa clone POP074-D07, complete se...    34   0.10   8
(AC149543) Populus trichocarpa clone Pop1-47M20, complete se...    36   0.11   6
(AB037920) Clostridium botulinum genes for ORF-22, HA-70, HA...    34   0.11   5
(BZ432282) BONKB81TR BO_1.6_2_KB_tot Brassica oleracea genom...    38   0.11   2
(EH011886) USDA-FP_184841 Lysiphlebus testaceipes adult whol...    34   0.11   3
(AM434702) Vitis vinifera contig VV79X000958.5, whole genome...    36   0.11   3
(AC209513) Solanum lycopersicum chromosome 6 clone C06HBa028...    36   0.11   6
(AC144807) Medicago truncatula clone mth2-9j13, complete seq...    36   0.12   10
(EF506945) Leptosira terrestris UTEX 333 chloroplast, comple...    36   0.12   11
(EU591879) Glossina morsitans submorsitans isolate Gms_IAEA ...    36   0.12   3
(CU571217) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   0.12   7
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    38   0.12   16
(AC116100) Dictyostelium discoideum chromosome 2 map 6163571...    34   0.12   7
(AE017197) Rickettsia typhi str. Wilmington complete genome.       36   0.12   16
(AM398681) Flavobacterium psychrophilum JIP02/86 complete ge...    36   0.12   16
(AM444260) Vitis vinifera contig VV78X101414.5, whole genome...    36   0.13   6
(AC184086) Populus trichocarpa clone Pop1-58C2, complete seq...    36   0.13   8
(AJ925855) Theileria annulata EST, clone tam009a05_q1k.            32   0.13   4
(CP000993) Borrelia recurrentis A1, complete genome.               36   0.13   20
(FB744742) Sequence 65 from Patent WO2008011620.                   34   0.13   9
(FB332203) Sequence 10 from Patent WO2007115213.                   34   0.13   9
(CS448326) Sequence 10 from Patent WO2006117381.                   34   0.13   9
(GM987246) Sequence 10 from Patent EP2009115.                      34   0.13   9
(GM841799) Sequence 122 from Patent WO2008122447.                  34   0.13   9
(BX248583) Blochmannia floridanus complete genome.                 32   0.13   14
(AE014819) Plasmodium falciparum 3D7 chromosome 14 section 4...    36   0.13   13
(CP000061) Aster yellows witches'-broom phytoplasma AYWB, co...    36   0.13   14
(AE014844) Plasmodium falciparum 3D7 chromosome 12, section ...    30   0.13   13
(DX549573) GH_MBb0081M06r GH_MBb Gossypium hirsutum genomic ...    32   0.13   4
(ER938871) AF__Bb0030D23r AF__Bb Aquilegia formosa genomic, ...    34   0.13   4
(FB676006) Sequence 9 from Patent WO2007118704.                    34   0.14   9
(EH013136) USDA-FP_185967 Lysiphlebus testaceipes adult whol...    34   0.14   3
(CR788285) Zebrafish DNA sequence from clone DKEYP-99C4 in l...    36   0.14   5
(AE015929) Staphylococcus epidermidis ATCC 12228, complete g...    42   0.14   18
(AC214415) Populus trichocarpa clone POP031-A03, complete se...    34   0.14   11
(AP005672) Physcomitrella patens subsp. patens chloroplast D...    38   0.14   7
(CT737286) Pig DNA sequence from clone CH242-125E23 on chrom...    34   0.14   10
(EK194838) 1095460034985 Global-Ocean-Sampling_GS-31-01-01-1...    38   0.14   2
(AC094226) Rattus norvegicus clone CH230-3B11, WORKING DRAFT...    50   0.14   1
(BZ131181) CH230-298J16.TV CHORI-230 Segment 2 Rattus norveg...    50   0.14   1
(DX544365) GH_MBb0074J24r GH_MBb Gossypium hirsutum genomic ...    34   0.15   3
(AC014109) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    38   0.15   6
(AP007663) Lotus japonicus genomic DNA, chromosome 1, clone:...    36   0.15   6
(EH013718) USDA-FP_186490 Lysiphlebus testaceipes adult whol...    34   0.15   3
(AC136037) Rattus norvegicus X BAC CH230-378N18 (Children's ...    36   0.15   7
(AX458511) Sequence 57 from Patent WO0246454.                      38   0.16   5
(AX345078) Sequence 149 from Patent WO0200928.                     38   0.16   5
(EU912438) Vaucheria litorea chloroplast, complete genome.         32   0.16   11
(AC079910) Homo sapiens 3 BAC RP11-418B12 (Roswell Park Canc...    32   0.16   10
(CR376751) Zebrafish DNA sequence from clone CH211-220M6 in ...    36   0.16   9
(CR382401) Plasmodium falciparum chromosome 6, complete sequ...    32   0.16   14
(AC210555) Populus trichocarpa clone POP104-J03, complete se...    36   0.17   6
(AP008019) Lotus japonicus genomic DNA, chromosome 1, clone:...    34   0.17   9
(AX348564) Sequence 22 from Patent WO0202807.                      40   0.17   5
(AX345019) Sequence 90 from Patent WO0200928.                      40   0.17   5
(AX344173) Sequence 20 from Patent WO0200926.                      40   0.17   5
(AL445647) Human DNA sequence from clone RP11-471M2 on chrom...    44   0.18   4
(BD452869) Diagnosis of Diseases Associated with tumor suppr...    34   0.18   5
(AX251348) Sequence 316 from Patent WO0168912.                     34   0.18   5
(AC114258) Dictyostelium discoideum chromosome 2 map complem...    40   0.18   5
(AM433555) Vitis vinifera contig VV78X216283.9, whole genome...    36   0.19   4
(EK229100) 1095460172156 Global-Ocean-Sampling_GS-31-01-01-1...    32   0.19   4
(FH436560) CHO_OF4993xc12f1.ab1 CHO_OF4 Nicotiana tabacum ge...    40   0.19   3
(AF166114) Mesostigma viride chloroplast DNA, complete genome.     30   0.19   11
(AC187125) Pan troglodytes BAC clone CH251-544O16 from chrom...    42   0.20   8
(EU286785) Manduca sexta mitochondrion, complete genome.           30   0.20   7
(CP000552) Prochlorococcus marinus str. MIT 9515, complete g...    34   0.20   18
(AC115581) Dictyostelium discoideum chromosome 2 map complem...    32   0.21   9
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ...    38   0.21   12
(CP000814) Campylobacter jejuni subsp. jejuni 81116, complet...    32   0.21   20
(AL929124) Zebrafish DNA sequence from clone CH211-128D23.         36   0.21   8
(AL929351) Plasmodium falciparum strain 3D7, chromosome 5, s...    34   0.21   14
(AM422018) Candidatus Phytoplasma australiense complete genome.    36   0.21   17
(AC061997) Homo sapiens chromosome 11, clone RP11-324K6, com...    38   0.21   7
(AC189481) Brassica rapa subsp. pekinensis clone KBrB082I19,...    38   0.22   9
(AC182688) Populus trichocarpa clone Pop1-39N8, complete seq...    34   0.22   8
(AC215358) Solanum lycopersicum chromosome 2 clone C02HBa002...    34   0.22   7
(AG877429) Oryza sativa Indica Group genomic DNA, BAC end se...    40   0.22   3
(AM470589) Vitis vinifera contig VV78X258052.13, whole genom...    38   0.22   6
(AB367682) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367681) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367680) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367678) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367677) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367632) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367631) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367630) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367629) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367628) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367627) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367625) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367624) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367623) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367622) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367621) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367613) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(AB367612) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.22   4
(EK369729) 1095469411738 Global-Ocean-Sampling_GS-31-01-01-1...    36   0.23   3
(AC187847) Zea mays chromosome UNKNOWN clone ZMMBBb-606N10; ...    34   0.23   8
(AC093786) Homo sapiens BAC clone RP11-213A7 from 4, complet...    40   0.24   7
(BX511005) Zebrafish DNA sequence from clone DKEY-72N1 in li...    38   0.25   8
(DQ529237) Campodea lubbocki mitochondrion, complete genome.       36   0.25   5
(AC223846) Bos taurus clone CH240-456E21, WORKING DRAFT SEQU...    36   0.25   7
(AB177497) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AB177496) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AB177495) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AB177494) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AB177493) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AB177492) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AB177491) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AB177490) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AB177489) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AB177488) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AB177487) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AB177486) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AB177485) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AB177480) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AB177474) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AB177472) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AB177469) Curculio hilgendorfi mitochondrial ND5 gene for N...    30   0.25   4
(AC117082) Dictyostelium discoideum chromosome 2 map complem...    40   0.26   5
(CP000932) Campylobacter lari RM2100, complete genome.             32   0.26   17
(AP009351) Staphylococcus aureus subsp. aureus str. Newman D...    34   0.27   21
(AP009394) Solanum lycopersicum genomic DNA, chromosome 8, c...    40   0.27   7
(AC209043) Populus trichocarpa clone POP055-H02, complete se...    40   0.28   7
(AC117080) Dictyostelium discoideum chromosome 2 map complem...    38   0.28   9
(AB041992) Homo sapiens genomic DNA, chromosome 6q21, clone:...    32   0.28   7
(AL935191) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    38   0.29   6
(AL935268) Zebrafish DNA sequence from clone CH211-199H23 in...    38   0.29   6
(AC004153) Plasmodium falciparum chromosome 12 clone PFYAC81...    36   0.29   10
(BD460383) Diagnosis of Diseases Associated with Cell Cycle.       34   0.29   4
(BD452929) Diagnosis of Diseases Associated with tumor suppr...    34   0.29   4
(BD452305) Diagnosis of Diseases Associated with Cell Cycle.       34   0.29   4
(AX458468) Sequence 14 from Patent WO0246454.                      34   0.29   4
(AX348724) Sequence 182 from Patent WO0202807.                     34   0.29   4
(AX346255) Sequence 1326 from Patent WO0200928.                    34   0.29   4
(AX344315) Sequence 162 from Patent WO0200926.                     34   0.29   4
(AX251919) Sequence 180 from Patent WO0168911.                     34   0.29   4
(AX251408) Sequence 376 from Patent WO0168912.                     34   0.29   4
(AC140774) Medicago truncatula clone mth2-5e11, complete seq...    34   0.29   8
(CR940353) Theileria annulata genomic DNA chromosome 4.            34   0.30   17
(AC107420) Homo sapiens chromosome 3 clone RP11-771N9, WORKI...    36   0.30   10
(AC208935) Populus trichocarpa clone JGIACSB1085-D05, comple...    38   0.30   3
(AX344568) Sequence 19 from Patent WO0200932.                      36   0.30   13
(AX344555) Sequence 6 from Patent WO0200932.                       32   0.30   13
(AL034558) Plasmodium falciparum MAL3P2.                           30   0.31   12
(AM454733) Vitis vinifera contig VV78X008724.11, whole genom...    44   0.31   4
(AJ927400) Theileria annulata EST, clone tam029f09_q1k.            38   0.32   3
(AM468296) Vitis vinifera contig VV78X023826.39, whole genom...    38   0.32   3
(EF494739) Blastocystis sp. DMP/02-328 mitochondrion, comple...    32   0.32   7
(AC220431) Bos taurus clone CH240-359A23, WORKING DRAFT SEQU...    34   0.32   2
(AC172970) Bos taurus clone CH240-279O16, WORKING DRAFT SEQU...    34   0.32   2
(FB571363) Sequence 230 from Patent EP1865317.                     34   0.33   6
(AP008118) Lotus japonicus genomic DNA, chromosome 2, clone:...    36   0.33   2
(AC023652) Homo sapiens chromosome 2 clone RP11-727O11 map 2...    34   0.34   6
(AF288092) Naegleria gruberi mitochondrial DNA, complete gen...    34   0.34   2
(AX344558) Sequence 9 from Patent WO0200932.                       38   0.35   12
(AX344560) Sequence 11 from Patent WO0200932.                      36   0.35   12
(CU466938) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   0.35   6
(AB084781) Mycoplasma mobile genes for P123, Gli349, Gli521,...    34   0.35   2
(DQ642846) Plasmodium falciparum HB3 apicoplast, complete ge...    30   0.37   6
(FE724375) SB05015A1F06.f1 Normalized subtracted Keck-Tagu L...    40   0.37   2
(AB059403) Mycoplasma mobile gene for adhesion protein, comp...    34   0.37   2
(CP000976) Borrelia duttonii Ly, complete genome.                  32   0.37   19
(AB074422) Mycoplasma mobile gene for adhesion protein, comp...    34   0.37   2
(AB074421) Mycoplasma mobile gene for truncated adhesin prot...    34   0.37   2
(AC188946) Gallus gallus BAC clone CH261-68C18 from chromoso...    42   0.38   3
(AY653733) Acanthamoeba polyphaga mimivirus, complete genome.      34   0.38   19
(CR450778) Zebrafish DNA sequence from clone DKEY-14I6 in li...    40   0.39   7
(AC189544) Brassica rapa subsp. pekinensis clone KBrH004I05,...    40   0.39   6
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g...    34   0.39   16
(AC221623) Bos taurus clone CH240-390B20, WORKING DRAFT SEQU...    38   0.40   8
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome.    36   0.40   15
(AM485869) Vitis vinifera contig VV78X169430.5, whole genome...    30   0.40   5
(BH941967) odf46g02.b1 B.oleracea002 Brassica oleracea genom...    46   0.41   2
(A06290) Synthetic nucleotide sequence for proteins from the...    32   0.41   4
(X13022) Plasmodium falciparum gene for thrombospondin relat...    32   0.41   4
(DX547696) GH_MBb0038F18f GH_MBb Gossypium hirsutum genomic ...    34   0.41   2
(AC005505) Plasmodium falciparum chromosome 12 clone PFYAC18...    36   0.41   10
(GE409700) 293807611 Nasonia vitripennis Female Pupae Nasoni...    38   0.42   2
(AY863212) Rhizopus oryzae mitochondrion, complete genome.         40   0.42   6
(DT989558) CLJ244-D10.x1d-t SHGC-CLJ Gasterosteus aculeatus ...    40   0.42   3
(CU929239) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    36   0.42   7
(AF466146) Melipona bicolor mitochondrial genome, partial se...    32   0.43   7
(Z97337) Arabidopsis thaliana DNA chromosome 4, ESSA I FCA c...    30   0.43   11
(AC214463) Solanum lycopersicum chromosome 9 clone C09HBa008...    32   0.43   8
(AP004953) Lotus japonicus genomic DNA, chromosome 3, clone:...    32   0.43   9
(CP000084) Candidatus Pelagibacter ubique HTCC1062, complete...    38   0.43   18
(AC215631) Populus trichocarpa clone POP063-B01, complete se...    32   0.43   9
(AC138056) Medicago truncatula clone mth2-13i6, complete seq...    40   0.44   7
(EU556754) Tetranychus urticae strain BR-VL mitochondrion, c...    32   0.44   6
(EU345430) Tetranychus urticae mitochondrion, complete genome.     32   0.44   6
(AC203076) Populus trichocarpa clone Pop1-41F08, complete se...    32   0.44   9
(AC234291) Homo sapiens chromosome UNKNOWN clone ABC11-47170...    38   0.44   6
(AY068538) Schmidtea mediterranea clone H.60.5h unknown mRNA...    38   0.45   3
(AC097383) Rattus norvegicus clone CH230-6B6, WORKING DRAFT ...    36   0.45   8
(AL049183) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    36   0.46   11
(AY894835) Phytophthora infestans haplotype Ia mitochondrion...    32   0.46   7
(AY333898) Cotesia acuminata from China NADH dehydrogenase s...    38   0.46   3
(AM486561) Vitis vinifera contig VV78X237443.7, whole genome...    44   0.46   2
(U17009) Phytophthora infestans mitochondrion, complete genome.    32   0.46   7
(AC216293) Solanum lycopersicum chromosome 12 clone LE_HBa-2...    32   0.47   9
(AL096783) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    30   0.47   9
(CT025837) Medicago truncatula chromosome 5 clone mth2-28f11...    40   0.47   6
(AY333897) Cotesia acuminata from Spain NADH dehydrogenase s...    38   0.48   3
(AC187864) Populus trichocarpa clone Pop1-32E3, complete seq...    38   0.49   6
(DX521329) GH_MBb0046O22f GH_MBb Gossypium hirsutum genomic ...    32   0.49   4
(AC144389) Medicago truncatula clone mth2-25e14, complete se...    34   0.49   7
(AL360354) Plasmodium vivax telomeric YAC clone, complete fi...    32   0.49   11
(FP102034) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   0.49   5
(AC018511) Homo sapiens chromosome 10 clone RP11-77G23, comp...    38   0.50   5
(AL159988) Human DNA sequence from clone RP11-480M11 on chro...    44   0.50   5
(FM992695) Candida dubliniensis CD36 chromosome R, complete ...    36   0.51   19
(BX004981) Zebrafish DNA sequence from clone CH211-169J7 in ...    40   0.51   7
(CU856525) Zebrafish DNA sequence from clone CH73-293C13 in ...    36   0.51   8
(EU168190) Heterosigma akashiwo strain NIES 293 chloroplast,...    34   0.51   8
(DX560317) GH_MBb0030P17f GH_MBb Gossypium hirsutum genomic ...    40   0.52   3
(AC169939) Bos taurus clone CH240-242P15, WORKING DRAFT SEQU...    46   0.52   6
(CU459184) Zebrafish DNA sequence from clone CH73-104C12 in ...    38   0.53   7
(BX548248) Zebrafish DNA sequence from clone DKEY-245P14 in ...    36   0.53   9
(AC187620) Pan troglodytes BAC clone CH251-546M4 from chromo...    30   0.53   12
(AC174379) Medicago truncatula chromosome 8 clone mth2-57p18...    32   0.54   10
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568...    32   0.54   10
(BX914197) Zebrafish DNA sequence from clone DKEYP-81F11 in ...    32   0.55   8
(CP000551) Prochlorococcus marinus str. AS9601, complete gen...    34   0.56   19
(CU695295) Brassica rapa subsp. pekinensis clone KBrH034J20,...    34   0.56   7
(CT485798) Medicago truncatula chromosome 5 clone mth2-24d7,...    30   0.56   9
(CT574579) Zebrafish DNA sequence from clone DKEY-233H12 in ...    48   0.57   1
(AP008208) Oryza sativa (japonica cultivar-group) genomic DN...    48   0.57   1
(AP005007) Oryza sativa Japonica Group genomic DNA, chromoso...    48   0.57   1
(CU914458) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.57   1
(ER286458) 1092343573070 Global-Ocean-Sampling_GS-34-01-01-1...    48   0.57   1
(ED738233) GM_WBb0098H06.f GM_WBb Glycine max genomic clone ...    48   0.57   1
(DE952403) Macropus eugenii DNA, BAC clone: MEB1-150O06_R, 3...    48   0.57   1
(CW555092) OA_ABa0075B24.r OA_ABa Oryza australiensis genomi...    48   0.57   1
(CT560467) A BAC library has been constructed from cultivar ...    48   0.57   1
(CT379686) Sus scrofa genomic clone CH242-295N21, genomic su...    48   0.57   1
(CL358303) RPCI44_414H5.f RPCI-44 Sus scrofa genomic clone R...    48   0.57   1
(EE601852) BT-TYLCV-055-1-F5-T3_F05 Whitefly Bemisia tabaci ...    48   0.57   1
(EE597313) HBT007_A06_T3_040 Whitefly Bemisia tabaci (non-vi...    48   0.57   1
(EB681315) KL4B.113B13F.060131T7 KL4B Nicotiana tabacum cDNA...    48   0.57   1
(EB439922) KN6B.104N13F.060103T7 KN6B Nicotiana tabacum cDNA...    48   0.57   1
(DW622044) CLJ325-G11.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    48   0.57   1
(DW622043) CLJ325-G11.x1d-t SHGC-CLJ2 Gasterosteus aculeatus...    48   0.57   1
(AU039177) Dictyostelium discoideum slug cDNA, clone SSM481.       48   0.57   1
(AU037304) Dictyostelium discoideum slug cDNA, clone SSB739.       48   0.57   1
(AC133341) Medicago truncatula clone mth2-28i3, complete seq...    38   0.57   6
(AY898628) Phytophthora infestans haplotype IIb mitochondrio...    32   0.57   7
(AY898627) Phytophthora infestans haplotype IIa mitochondrio...    32   0.58   7
(ED537360) KBrB130J01F KBrB, Brassica rapa BamHI BAC library...    46   0.59   2
(CB831308) ri23e11.y1 Meloidogyne chitwoodi egg pAMP1 v1 Mel...    28   0.59   4
(AX323793) Sequence 281 from Patent WO0192565.                     34   0.59   5
(GM996141) Sequence 281 from Patent EP2014776.                     34   0.59   5
(AC209510) Solanum lycopersicum chromosome 6 clone C06HBa010...    38   0.59   7
(AC214100) Populus trichocarpa clone POP063-I02, complete se...    40   0.60   6
(AC213926) Populus trichocarpa clone POP063-D18, complete se...    40   0.60   6
(CR382400) Plasmodium falciparum chromosome 6, complete sequ...    32   0.61   16

>(AC116957) Dictyostelium discoideum chromosome 2 map 1685067-2090751
              strain AX4, complete sequence.
          Length = 405682

 Score =  714 bits (360), Expect(7) = 0.0
 Identities = 378/385 (98%)
 Strand = Plus / Plus


Query: 1      ttttatgatgctggagaaagatcaaggcaattatttgaaaatatttctcatattaatcan 60
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299813 ttttatgatgctggagaaagatcaaggcaattatttgaaaatatttctcatattaatcaa 299872


Query: 61     gtttcattagttttattaatattaaatatagatctaaataaaacatcaccaacaataaac 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299873 gtttcattagttttattaatattaaatatagatctaaataaaacatcaccaacaataaac 299932


Query: 121    ttaattggcgaaaaaacatttggagatttaaaaaattattgntcttttaatattgatttt 180
              |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 299933 ttaattggtgaaaaaacatttggagatttaaaaaattattgttcttttaatattgatttt 299992


Query: 181    caagatattaatggaaataaaatcaaagagtcagaantaaagaaaaaaccattattaata 240
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 299993 caagatattaatggaaataaaatcaaagagtcagaaataaagaaaaaaccattattaata 300052


Query: 241    attgatgggaaatcagtttcaagatcatttataaaatatgttggatttgaaaataatact 300
              |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 300053 attgatgggaaatcagtttcaagatcatttataaaatatgctgcatttgaaaataatact 300112


Query: 301    ttatgtaataaaaaattaatatcaattaataatttattattcaaagattggagttcaaca 360
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300113 ttatgtaataaaaaattcatatcaattaataatttattattcaaagattggagttcaaca 300172


Query: 361    ttagtattttcaaattcattactaa 385
              |||||||||||||||||||||||||
Sbjct: 300173 ttagtattttcaaattcattactaa 300197

 Score =  240 bits (121), Expect(7) = 0.0
 Identities = 121/121 (100%)
 Strand = Plus / Plus


Query: 669    tatttatcagatataatagaatacgaatatggagaatcagttgaaggattattctctaat 728
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301277 tatttatcagatataatagaatacgaatatggagaatcagttgaaggattattctctaat 301336


Query: 729    caaacatcgtgtgataatcctcatacatgtccatcaagttcaagccatatcgatcatatt 788
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301337 caaacatcgtgtgataatcctcatacatgtccatcaagttcaagccatatcgatcatatt 301396


Query: 789    t 789
              |
Sbjct: 301397 t 301397

 Score =  186 bits (94), Expect(7) = 0.0
 Identities = 94/94 (100%)
 Strand = Plus / Plus


Query: 508    taattgttccagttttgatttgttcaattacaatttctatatttattttggtggccattt 567
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301116 taattgttccagttttgatttgttcaattacaatttctatatttattttggtggccattt 301175


Query: 568    ttaggaaaaatattaaattgtattttgaaaatct 601
              ||||||||||||||||||||||||||||||||||
Sbjct: 301176 ttaggaaaaatattaaattgtattttgaaaatct 301209

 Score =  121 bits (61), Expect(7) = 0.0
 Identities = 61/61 (100%)
 Strand = Plus / Plus


Query: 440    cagcgatgatttagtaacaaaaaataataaaattcataaatttgatagaggtgatttgat 499
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301048 cagcgatgatttagtaacaaaaaataataaaattcataaatttgatagaggtgatttgat 301107


Query: 500    t 500
              |
Sbjct: 301108 t 301108

 Score =  121 bits (61), Expect(7) = 0.0
 Identities = 61/61 (100%)
 Strand = Plus / Plus


Query: 812    gatgctccagaattagataataatgtttaaaaataaaaattatattattcattttaattt 871
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301418 gatgctccagaattagataataatgtttaaaaataaaaattatattattcattttaattt 301477


Query: 872    a 872
              |
Sbjct: 301478 a 301478

 Score = 85.7 bits (43), Expect(7) = 0.0
 Identities = 43/43 (100%)
 Strand = Plus / Plus


Query: 387    ataaaccttatcattctttagatttttatttttcatcaataac 429
              |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300198 ataaaccttatcattctttagatttttatttttcatcaataac 300240

 Score = 42.1 bits (21), Expect(7) = 0.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus


Query: 791    ctgtgcttgataaaaataacg 811
              |||||||||||||||||||||
Sbjct: 301398 ctgtgcttgataaaaataacg 301418

 Score = 30.2 bits (15), Expect(16) = 4e-04
 Identities = 15/15 (100%)
 Strand = Plus / Minus


Query: 539   aatttctatatttat 553
             |||||||||||||||
Sbjct: 19537 aatttctatatttat 19523

 Score = 30.2 bits (15), Expect(16) = 4e-04
 Identities = 15/15 (100%)
 Strand = Plus / Minus


Query: 326    ttaataatttattat 340
              |||||||||||||||
Sbjct: 264390 ttaataatttattat 264376

 Score = 30.2 bits (15), Expect(16) = 4e-04
 Identities = 15/15 (100%)
 Strand = Plus / Minus


Query: 292    aataatactttatgt 306
              |||||||||||||||
Sbjct: 332148 aataatactttatgt 332134

 Score = 30.2 bits (15), Expect(16) = 4e-04
 Identities = 15/15 (100%)
 Strand = Plus / Minus


Query: 231    attattaataattga 245
              |||||||||||||||
Sbjct: 393115 attattaataattga 393101

 Score = 30.2 bits (15), Expect(16) = 4e-04
 Identities = 15/15 (100%)
 Strand = Plus / Minus


Query: 71     ttttattaatattaa 85
              |||||||||||||||
Sbjct: 404646 ttttattaatattaa 404632

 Score = 28.2 bits (14), Expect(16) = 4e-04
 Identities = 17/18 (94%)
 Strand = Plus / Minus


Query: 848   aaattatattattcattt 865
             |||||||||||| |||||
Sbjct: 18797 aaattatattatccattt 18780

 Score = 28.2 bits (14), Expect(16) = 4e-04
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 458    aaaaaataataaaa 471
              ||||||||||||||
Sbjct: 129061 aaaaaataataaaa 129048

 Score = 28.2 bits (14), Expect(16) = 4e-04
 Identities = 17/18 (94%)
 Strand = Plus / Minus


Query: 409    tttttatttttcatcaat 426
              |||||||||||| |||||
Sbjct: 153405 tttttatttttcttcaat 153388

 Score = 28.2 bits (14), Expect(16) = 4e-04
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 372    aaattcattactaa 385
              ||||||||||||||
Sbjct: 189515 aaattcattactaa 189502

 Score = 28.2 bits (14), Expect(16) = 4e-04
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 312    aaaattaatatcaa 325
              ||||||||||||||
Sbjct: 294151 aaaattaatatcaa 294138

 Score = 28.2 bits (14), Expect(16) = 4e-04
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 270    tataaaatatgttg 283
              ||||||||||||||
Sbjct: 347466 tataaaatatgttg 347453

 Score = 28.2 bits (14), Expect(16) = 4e-04
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 147    tttaaaaaattatt 160
              ||||||||||||||
Sbjct: 393304 tttaaaaaattatt 393291

 Score = 26.3 bits (13), Expect(16) = 4e-04
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 526   tttgttcaattac 538
             |||||||||||||
Sbjct: 62057 tttgttcaattac 62045

 Score = 26.3 bits (13), Expect(16) = 4e-04
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 467    taaaattcataaa 479
              |||||||||||||
Sbjct: 122294 taaaattcataaa 122282

 Score = 26.3 bits (13), Expect(16) = 4e-04
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 448    atttagtaacaaa 460
              |||||||||||||
Sbjct: 132238 atttagtaacaaa 132226

 Score = 26.3 bits (13), Expect(16) = 4e-04
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 339    attcaaagattgg 351
              |||||||||||||
Sbjct: 225178 attcaaagattgg 225166

 Score = 40.1 bits (20), Expect(15) = 0.034
 Identities = 20/20 (100%)
 Strand = Plus / Plus


Query: 96    aaataaaacatcaccaacaa 115
             ||||||||||||||||||||
Sbjct: 27136 aaataaaacatcaccaacaa 27155

 Score = 34.2 bits (17), Expect(15) = 0.034
 Identities = 20/21 (95%)
 Strand = Plus / Plus


Query: 318    aatatcaattaataatttatt 338
              |||||||| ||||||||||||
Sbjct: 149554 aatatcaaataataatttatt 149574

 Score = 28.2 bits (14), Expect(15) = 0.034
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 67    ttagttttattaat 80
             ||||||||||||||
Sbjct: 22145 ttagttttattaat 22158

 Score = 28.2 bits (14), Expect(15) = 0.034
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 144   agatttaaaaaatt 157
             ||||||||||||||
Sbjct: 79703 agatttaaaaaatt 79716

 Score = 28.2 bits (14), Expect(15) = 0.034
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 847    aaaattatattatt 860
              ||||||||||||||
Sbjct: 218274 aaaattatattatt 218287

 Score = 26.3 bits (13), Expect(15) = 0.034
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 196    aataaaatcaaag 208
              |||||||||||||
Sbjct: 110066 aataaaatcaaag 110078

 Score = 26.3 bits (13), Expect(15) = 0.034
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 307    aataaaaaattaa 319
              |||||||||||||
Sbjct: 147566 aataaaaaattaa 147578

 Score = 26.3 bits (13), Expect(15) = 0.034
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 340    ttcaaagattgga 352
              |||||||||||||
Sbjct: 153978 ttcaaagattgga 153990

 Score = 26.3 bits (13), Expect(15) = 0.034
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 405    tagatttttattt 417
              |||||||||||||
Sbjct: 175542 tagatttttattt 175554

 Score = 26.3 bits (13), Expect(15) = 0.034
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 414    atttttcatcaat 426
              |||||||||||||
Sbjct: 181383 atttttcatcaat 181395

 Score = 26.3 bits (13), Expect(15) = 0.034
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 459    aaaaataataaaa 471
              |||||||||||||
Sbjct: 198772 aaaaataataaaa 198784

 Score = 26.3 bits (13), Expect(15) = 0.034
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 470    aattcataaattt 482
              |||||||||||||
Sbjct: 199407 aattcataaattt 199419

 Score = 26.3 bits (13), Expect(15) = 0.034
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 573    aaaaatattaaat 585
              |||||||||||||
Sbjct: 201409 aaaaatattaaat 201421

 Score = 26.3 bits (13), Expect(15) = 0.034
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 717    ttattctctaatc 729
              |||||||||||||
Sbjct: 212929 ttattctctaatc 212941

 Score = 26.3 bits (13), Expect(15) = 0.034
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 838    ttaaaaataaaaa 850
              |||||||||||||
Sbjct: 215382 ttaaaaataaaaa 215394

 Score = 34.2 bits (17), Expect(12) = 0.054
 Identities = 17/17 (100%)
 Strand = Plus / Plus


Query: 839    taaaaataaaaattata 855
              |||||||||||||||||
Sbjct: 391026 taaaaataaaaattata 391042

 Score = 30.2 bits (15), Expect(12) = 0.054
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 32    tatttgaaaatattt 46
             |||||||||||||||
Sbjct: 96815 tatttgaaaatattt 96829

 Score = 30.2 bits (15), Expect(12) = 0.054
 Identities = 18/19 (94%)
 Strand = Plus / Plus


Query: 138    atttggagatttaaaaaat 156
              |||||||||||||| ||||
Sbjct: 114370 atttggagatttaacaaat 114388

 Score = 30.2 bits (15), Expect(12) = 0.054
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 227    aaccattattaataa 241
              |||||||||||||||
Sbjct: 181066 aaccattattaataa 181080

 Score = 30.2 bits (15), Expect(12) = 0.054
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 314    aattaatatcaatta 328
              |||||||||||||||
Sbjct: 206030 aattaatatcaatta 206044

 Score = 28.2 bits (14), Expect(12) = 0.054
 Identities = 20/22 (90%)
 Strand = Plus / Plus


Query: 179    ttcaagatattaatggaaataa 200
              |||| ||||| |||||||||||
Sbjct: 152749 ttcatgatataaatggaaataa 152770

 Score = 28.2 bits (14), Expect(12) = 0.054
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 305    gtaataaaaaatta 318
              ||||||||||||||
Sbjct: 194195 gtaataaaaaatta 194208

 Score = 28.2 bits (14), Expect(12) = 0.054
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 398    cattctttagattt 411
              ||||||||||||||
Sbjct: 219377 cattctttagattt 219390

 Score = 28.2 bits (14), Expect(12) = 0.054
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 456    acaaaaaataataa 469
              ||||||||||||||
Sbjct: 229229 acaaaaaataataa 229242

 Score = 28.2 bits (14), Expect(12) = 0.054
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 573    aaaaatattaaatt 586
              ||||||||||||||
Sbjct: 246416 aaaaatattaaatt 246429

 Score = 26.3 bits (13), Expect(12) = 0.054
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 74     tattaatattaaa 86
              |||||||||||||
Sbjct: 100582 tattaatattaaa 100594

 Score = 26.3 bits (13), Expect(12) = 0.054
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 356    caacattagtatt 368
              |||||||||||||
Sbjct: 207813 caacattagtatt 207825

 Score = 34.2 bits (17), Expect(10) = 0.30
 Identities = 20/21 (95%)
 Strand = Plus / Minus


Query: 458   aaaaaataataaaattcataa 478
             |||||||||||||||| ||||
Sbjct: 97826 aaaaaataataaaattaataa 97806

 Score = 32.2 bits (16), Expect(10) = 0.30
 Identities = 19/20 (95%)
 Strand = Plus / Minus


Query: 308    ataaaaaattaatatcaatt 327
              |||| |||||||||||||||
Sbjct: 190485 ataataaattaatatcaatt 190466

 Score = 32.2 bits (16), Expect(10) = 0.30
 Identities = 16/16 (100%)
 Strand = Plus / Minus


Query: 142    ggagatttaaaaaatt 157
              ||||||||||||||||
Sbjct: 308679 ggagatttaaaaaatt 308664

 Score = 30.2 bits (15), Expect(10) = 0.30
 Identities = 15/15 (100%)
 Strand = Plus / Minus


Query: 539   aatttctatatttat 553
             |||||||||||||||
Sbjct: 25108 aatttctatatttat 25094

 Score = 30.2 bits (15), Expect(10) = 0.30
 Identities = 15/15 (100%)
 Strand = Plus / Minus


Query: 408    atttttatttttcat 422
              |||||||||||||||
Sbjct: 104222 atttttatttttcat 104208

 Score = 28.2 bits (14), Expect(10) = 0.30
 Identities = 17/18 (94%)
 Strand = Plus / Minus


Query: 848   aaattatattattcattt 865
             |||||||||||| |||||
Sbjct: 24348 aaattatattatccattt 24331

 Score = 28.2 bits (14), Expect(10) = 0.30
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 361    ttagtattttcaaa 374
              ||||||||||||||
Sbjct: 139494 ttagtattttcaaa 139481

 Score = 28.2 bits (14), Expect(10) = 0.30
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 72     tttattaatattaa 85
              ||||||||||||||
Sbjct: 323999 tttattaatattaa 323986

 Score = 26.3 bits (13), Expect(10) = 0.30
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 324    aattaataattta 336
              |||||||||||||
Sbjct: 165446 aattaataattta 165434

 Score = 26.3 bits (13), Expect(10) = 0.30
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 282    tggatttgaaaat 294
              |||||||||||||
Sbjct: 210735 tggatttgaaaat 210723

 Score = 30.2 bits (15), Expect(15) = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus


Query: 539   aatttctatatttat 553
             |||||||||||||||
Sbjct: 10790 aatttctatatttat 10776

 Score = 30.2 bits (15), Expect(15) = 1.7
 Identities = 15/15 (100%)
 Strand = Plus / Minus


Query: 165    ttttaatattgattt 179
              |||||||||||||||
Sbjct: 161385 ttttaatattgattt 161371

 Score = 28.2 bits (14), Expect(15) = 1.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 372   aaattcattactaa 385
             ||||||||||||||
Sbjct: 16434 aaattcattactaa 16421

 Score = 28.2 bits (14), Expect(15) = 1.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 231    attattaataattg 244
              ||||||||||||||
Sbjct: 109787 attattaataattg 109774

 Score = 28.2 bits (14), Expect(15) = 1.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 147    tttaaaaaattatt 160
              ||||||||||||||
Sbjct: 282793 tttaaaaaattatt 282780

 Score = 28.2 bits (14), Expect(15) = 1.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 138    atttggagatttaa 151
              ||||||||||||||
Sbjct: 301222 atttggagatttaa 301209

 Score = 28.2 bits (14), Expect(15) = 1.7
 Identities = 17/18 (94%)
 Strand = Plus / Minus


Query: 73     ttattaatattaaatata 90
              ||||||||||| ||||||
Sbjct: 311580 ttattaatattcaatata 311563

 Score = 28.2 bits (14), Expect(15) = 1.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 65     cattagttttatta 78
              ||||||||||||||
Sbjct: 403801 cattagttttatta 403788

 Score = 26.3 bits (13), Expect(15) = 1.7
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 839  taaaaataaaaat 851
            |||||||||||||
Sbjct: 3169 taaaaataaaaat 3157

 Score = 26.3 bits (13), Expect(15) = 1.7
 Identities = 16/17 (94%)
 Strand = Plus / Minus


Query: 403   tttagatttttattttt 419
             |||| ||||||||||||
Sbjct: 12132 tttaaatttttattttt 12116

 Score = 26.3 bits (13), Expect(15) = 1.7
 Identities = 16/17 (94%)
 Strand = Plus / Minus


Query: 325   attaataatttattatt 341
             ||||| |||||||||||
Sbjct: 17620 attaaaaatttattatt 17604

 Score = 26.3 bits (13), Expect(15) = 1.7
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 318   aatatcaattaat 330
             |||||||||||||
Sbjct: 87155 aatatcaattaat 87143

 Score = 26.3 bits (13), Expect(15) = 1.7
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 306    taataaaaaatta 318
              |||||||||||||
Sbjct: 103091 taataaaaaatta 103079

 Score = 26.3 bits (13), Expect(15) = 1.7
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 267    atttataaaatat 279
              |||||||||||||
Sbjct: 109660 atttataaaatat 109648

 Score = 26.3 bits (13), Expect(15) = 1.7
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 190    aatggaaataaaa 202
              |||||||||||||
Sbjct: 127074 aatggaaataaaa 127062

 Score = 32.2 bits (16), Expect(11) = 7.4
 Identities = 16/16 (100%)
 Strand = Plus / Minus


Query: 324    aattaataatttatta 339
              ||||||||||||||||
Sbjct: 401911 aattaataatttatta 401896

 Score = 30.2 bits (15), Expect(11) = 7.4
 Identities = 18/19 (94%)
 Strand = Plus / Minus


Query: 575    aaatattaaattgtatttt 593
              |||| ||||||||||||||
Sbjct: 207676 aaattttaaattgtatttt 207658

 Score = 30.2 bits (15), Expect(11) = 7.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus


Query: 458    aaaaaataataaaat 472
              |||||||||||||||
Sbjct: 275764 aaaaaataataaaat 275750

 Score = 30.2 bits (15), Expect(11) = 7.4
 Identities = 15/15 (100%)
 Strand = Plus / Minus


Query: 307    aataaaaaattaata 321
              |||||||||||||||
Sbjct: 401971 aataaaaaattaata 401957

 Score = 28.2 bits (14), Expect(11) = 7.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 859   ttcattttaattta 872
             ||||||||||||||
Sbjct: 88166 ttcattttaattta 88153

 Score = 28.2 bits (14), Expect(11) = 7.4
 Identities = 17/18 (94%)
 Strand = Plus / Minus


Query: 519    gttttgatttgttcaatt 536
              |||||| |||||||||||
Sbjct: 230385 gttttgttttgttcaatt 230368

 Score = 28.2 bits (14), Expect(11) = 7.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 406    agatttttattttt 419
              ||||||||||||||
Sbjct: 373745 agatttttattttt 373732

 Score = 28.2 bits (14), Expect(11) = 7.4
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 165    ttttaatattgatt 178
              ||||||||||||||
Sbjct: 405047 ttttaatattgatt 405034

 Score = 26.3 bits (13), Expect(11) = 7.4
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 848    aaattatattatt 860
              |||||||||||||
Sbjct: 135116 aaattatattatt 135104

 Score = 26.3 bits (13), Expect(11) = 7.4
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 839    taaaaataaaaat 851
              |||||||||||||
Sbjct: 175574 taaaaataaaaat 175562

 Score = 26.3 bits (13), Expect(11) = 7.4
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 822    aattagataataa 834
              |||||||||||||
Sbjct: 176194 aattagataataa 176182

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,464,964,675
Number of extensions: 112076104
Number of successful extensions: 10965349
Number of sequences better than 10.0: 1849
Length of query: 872
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 848
Effective length of database: 99,340,224,878
Effective search space: 84240510696544
Effective search space used: 84240510696544
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U00783-1 (Contig-U00783-1Q) /CSM_Contig/Contig-U00783-1Q.Seq.d
         (872 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116957_106(AC116957|pid:none) Dictyostelium discoideum chromos...   191   5e-51
CP001357_1883(CP001357|pid:none) Brachyspira hyodysenteriae WA1,...    35   3.3
CP000880_2288(CP000880|pid:none) Salmonella enterica subsp. ariz...    34   5.6
AM942759_2679(AM942759|pid:none) Proteus mirabilis strain HI4320...    34   5.6

>AC116957_106(AC116957|pid:none) Dictyostelium discoideum chromosome
           2 map 1685067-2090751 strain AX4, complete sequence.
          Length = 566

 Score =  191 bits (485), Expect(2) = 5e-51
 Identities = 96/117 (82%), Positives = 96/117 (82%)
 Frame = +1

Query: 1   FYDAGERSRQLFENXXXXXXXXXXXXXXXXDLNKTSPTINLIGEKTFGDLKNYXSFNIDF 180
           FYDAGERSRQLFEN                DLNKTSPTINLIGEKTFGDLKNY SFNIDF
Sbjct: 23  FYDAGERSRQLFENISHINQVSLVLLILNIDLNKTSPTINLIGEKTFGDLKNYCSFNIDF 82

Query: 181 QDINGNKIKESEXKKKPLLIIDGKSVSRSFIKYVGFENNTLCNKKLISINNLLFKDW 351
           QDINGNKIKESE KKKPLLIIDGKSVSRSFIKY  FENNTLCNKK ISINNLLFKDW
Sbjct: 83  QDINGNKIKESEIKKKPLLIIDGKSVSRSFIKYAAFENNTLCNKKFISINNLLFKDW 139

 Score = 34.3 bits (77), Expect(2) = 5e-51
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +2

Query: 389 KPYHSLDFYFSSIT 430
           KPYHSLDFYFSSIT
Sbjct: 152 KPYHSLDFYFSSIT 165

 Score =  191 bits (486), Expect(2) = 3e-48
 Identities = 97/116 (83%), Positives = 97/116 (83%)
 Frame = +3

Query: 441 SDDLVTKNNKIHKFDRGDLIKKIIVPVLICSITISIFILVAIFRKNIKLYFENLKSPXXX 620
           SDDLVTKNNKIHKFDRGDLIKKIIVPVLICSITISIFILVAIFRKNIKLYFENLKSP
Sbjct: 435 SDDLVTKNNKIHKFDRGDLIKKIIVPVLICSITISIFILVAIFRKNIKLYFENLKSPNNG 494

Query: 621 XXXXXXXXXXXXXXXXYLSDIIEYEYGESVEGLFSNQTSCDNPHTCPSSSSHIDHI 788
                           YLSDIIEYEYGESVEGLFSNQTSCDNPHTCPSSSSHIDHI
Sbjct: 495 NVSTNSINTNNNVNGNYLSDIIEYEYGESVEGLFSNQTSCDNPHTCPSSSSHIDHI 550

 Score = 24.6 bits (52), Expect(2) = 3e-48
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 785 YLLCLIKITDAPELDNNV 838
           ++  L K  DAPELDNNV
Sbjct: 549 HISVLDKNNDAPELDNNV 566

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 951,988,378
Number of extensions: 15058477
Number of successful extensions: 40147
Number of sequences better than 10.0: 4
Number of HSP's gapped: 40134
Number of HSP's successfully gapped: 7
Length of query: 290
Length of database: 1,051,180,864
Length adjustment: 127
Effective length of query: 163
Effective length of database: 640,137,871
Effective search space: 104342472973
Effective search space used: 104342472973
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.78  gvh: 0.46  alm: 0.14  top: 0.50  tms: 0.07  mit: 0.22  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.25  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 24.0 %: endoplasmic reticulum
	 20.0 %: cytoplasmic
	 16.0 %: mitochondrial
	 16.0 %: nuclear
	 12.0 %: Golgi
	  8.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U00783-1 is end