Contig-U03447-1
Contig ID Contig-U03447-1
Contig update 2001. 8.29
Contig sequence
>Contig-U03447-1 (Contig-U03447-1Q) /CSM_Contig/Contig-U03447-1Q.Seq.d
ATTACTTCAATATCACCATCACCACCATCATCATCATCATTGTCATCAAC
AACTCCAACACCAACTACCACATCAATACCATATTCTCCAAATAATAATA
TCAATAATAATGTAAACTATAATAAAACTAGAAAGTATCTTATAAATGGA
GTAATTGGTGCATCTTTATTGGGCGGATCGTTATTTTATAGAGAAAGAAA
GTCAATTTATCTTTTAACAGGCGGTTTATGGCTTAACAAAGGTTTATTAA
TATTTAA

Gap no gap
Contig length 257
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 3159588
End point 3159850
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U03447
List of clone(s)

est1=SFC705Z,1,258
Translated Amino Acid sequence
ITSISPSPPSSSSLSSTTPTPTTTSIPYSPNNNINNNVNYNKTRKYLINGVIGASLLGGS
LFYRERKSIYLLTGGLWLNKGLLIF


Translated Amino Acid sequence (All Frames)
Frame A:
ITSISPSPPSSSSLSSTTPTPTTTSIPYSPNNNINNNVNYNKTRKYLINGVIGASLLGGS
LFYRERKSIYLLTGGLWLNKGLLIF


Frame B:
llqyhhhhhhhhhchqqlqhqlphqyhilqiiisiim*tiiklesil*me*lvhlywadr
yfiekesqfif*qavygltkvy*yl


Frame C:
yfnitittiiiiivinnsntnyhintifsk**yq**ckl**n*kvsykwsnwcifigriv
il*rkkvnlsfnrrfma*qrfini*


own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U03447-1 (Contig-U03447-1Q)
/CSM_Contig/Contig-U03447-1Q.Seq.d
(257 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U03447-1 (Contig-U03447-1Q) /CSM_Contig/Conti... 414 e-116
Contig-U12020-1 (Contig-U12020-1Q) /CSM_Contig/Conti... 44 7e-05
Contig-U11411-1 (Contig-U11411-1Q) /CSM_Contig/Conti... 44 7e-05
Contig-U12926-1 (Contig-U12926-1Q) /CSM_Contig/Conti... 42 3e-04
Contig-U12216-1 (Contig-U12216-1Q) /CSM_Contig/Conti... 42 3e-04
Contig-U09479-1 (Contig-U09479-1Q) /CSM_Contig/Conti... 42 3e-04
Contig-U04462-1 (Contig-U04462-1Q) /CSM_Contig/Conti... 42 3e-04
Contig-U10880-1 (Contig-U10880-1Q) /CSM_Contig/Conti... 40 0.001
Contig-U08402-1 (Contig-U08402-1Q) /CSM_Contig/Conti... 40 0.001
Contig-U06778-1 (Contig-U06778-1Q) /CSM_Contig/Conti... 36 0.017

>Contig-U03447-1 (Contig-U03447-1Q) /CSM_Contig/Contig-U03447-1Q.Seq.d
Length = 257

Score = 414 bits (209), Expect = e-116
Identities = 209/209 (100%)
Strand = Plus / Plus


Query: 49 acaactccaacaccaactaccacatcaataccatattctccaaataataatatcaataat 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 acaactccaacaccaactaccacatcaataccatattctccaaataataatatcaataat 108


Query: 109 aatgtaaactataataaaactagaaagtatcttataaatggagtaattggtgcatcttta 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 aatgtaaactataataaaactagaaagtatcttataaatggagtaattggtgcatcttta 168


Query: 169 ttgggcggatcgttattttatagagaaagaaagtcaatttatcttttaacaggcggttta 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 ttgggcggatcgttattttatagagaaagaaagtcaatttatcttttaacaggcggttta 228


Query: 229 tggcttaacaaaggtttattaatatttaa 257
|||||||||||||||||||||||||||||
Sbjct: 229 tggcttaacaaaggtttattaatatttaa 257


>Contig-U12020-1 (Contig-U12020-1Q) /CSM_Contig/Contig-U12020-1Q.Seq.d
Length = 1440

Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 88 ccaaataataatatcaataata 109
||||||||||||||||||||||
Sbjct: 368 ccaaataataatatcaataata 389


>Contig-U11411-1 (Contig-U11411-1Q) /CSM_Contig/Contig-U11411-1Q.Seq.d
Length = 1518

Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 91 aataataatatcaataataatg 112
||||||||||||||||||||||
Sbjct: 224 aataataatatcaataataatg 245


Score = 30.2 bits (15), Expect = 1.1
Identities = 18/19 (94%)
Strand = Plus / Minus


Query: 75 aataccatattctccaaat 93
|||||||||||||| ||||
Sbjct: 1382 aataccatattctctaaat 1364


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6294
Number of Sequences: 6905
Number of extensions: 6294
Number of successful extensions: 2397
Number of sequences better than 10.0: 618
length of query: 257
length of database: 5,674,871
effective HSP length: 15
effective length of query: 242
effective length of database: 5,571,296
effective search space: 1348253632
effective search space used: 1348253632
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 5.31
Homology vs DNA
Query= Contig-U03447-1 (Contig-U03447-1Q) /CSM_Contig/Contig-U03447-1Q.Seq.d
(257 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ399465) Dictyostelium discoideum cDNA clone:dds6j01, 3' e... 347 1e-91 1
(FP102463) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 54 0.003 1
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 52 0.010 1
(AC177699) Strongylocentrotus purpuratus clone R3-1011L8, WO... 50 0.040 1
(AY191013) Dictyostelium discoideum autophagy protein 6 (apg... 44 0.049 2
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 36 0.060 4
(BX005065) Zebrafish DNA sequence from clone CH211-163B2 in ... 42 0.082 4
(DY892924) CeleSEQ12062 Cunninghamella elegans pBluescript (... 48 0.16 1
(DY888753) CeleSEQ6037 Cunninghamella elegans pBluescript (E... 48 0.16 1
(CT990620) Zebrafish DNA sequence from clone DKEY-45H18 in l... 42 0.31 3
(BX322611) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 40 0.32 3
(DE321032) Bombyx mori genomic DNA, BAC clone:BES_624_P24. 34 0.46 2
(DE317252) Bombyx mori genomic DNA, BAC clone:BES_612_B13. 34 0.46 2
(AC116987) Dictyostelium discoideum chromosome 2 map 3527441... 42 0.46 3
(AC184949) Bos taurus clone CH240-306D1, WORKING DRAFT SEQUE... 36 0.59 3
(CR847974) Zebrafish DNA sequence from clone CH211-241P16 in... 46 0.62 1
(CR589875) Zebrafish DNA sequence from clone DKEY-15K16 in l... 46 0.62 1
(BX649642) Zebrafish DNA sequence from clone CH211-136J9 in ... 46 0.62 1
(BX649566) Zebrafish DNA sequence from clone CH211-15I6 in l... 46 0.62 1
(AL844856) Mouse DNA sequence from clone RP23-377G1 on chrom... 46 0.62 1
(Z35845) S.cerevisiae chromosome II reading frame ORF YBL084c. 46 0.62 1
(X79489) S.cerevisiae genomic DNA, chromosome II from Y elem... 46 0.62 1
(AM469711) Vitis vinifera contig VV78X002236.4, whole genome... 46 0.62 1
(EA376271) Sequence 25094 from patent US 7314974. 46 0.62 1
(DL338335) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS. 46 0.62 1
(DJ204784) Method for identification of useful proteins deri... 46 0.62 1
(DJ025870) Genome-wide DNA marker of Saccharomyces cerevisiae. 46 0.62 1
(AX829958) Sequence 678 from Patent WO03072602. 46 0.62 1
(AX818928) Sequence 678 from Patent EP1338608. 46 0.62 1
(AX595010) Sequence 664 from Patent EP1258494. 46 0.62 1
(AC170068) Tachyglossus aculeatus clone TA_Ba-186I24, comple... 46 0.62 1
(CP000181) Drosophila melanogaster genomic scaffold 21100002... 46 0.62 1
(AC116922) Dictyostelium discoideum chromosome 2 map 6061442... 46 0.62 1
(AC151893) Aotus nancymaae clone CH258-487I23, WORKING DRAFT... 46 0.62 1
(FP103057) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.62 1
(FP016145) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.62 1
(CU655815) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.62 1
(AC184656) Strongylocentrotus purpuratus clone R3-3070N22, W... 46 0.62 1
(AC180507) Strongylocentrotus purpuratus clone R3-3099O07, W... 46 0.62 1
(AC176687) Strongylocentrotus purpuratus clone R3-3088G02, W... 46 0.62 1
(AQ427180) CITBI-E1-2555D13.TR CITBI-E1 Homo sapiens genomic... 46 0.62 1
(DX525995) GH_MBb0055I06f GH_MBb Gossypium hirsutum genomic ... 46 0.62 1
(DX159100) OR_ABa0012O15.f OR_ABa Oryza ridleyi genomic clon... 46 0.62 1
(DE373644) Bombyx mori genomic DNA, BAC clone:BET_640_G19. 46 0.62 1
(DE371014) Bombyx mori genomic DNA, BAC clone:BET_631_M24. 46 0.62 1
(EC823147) SME00001534 esmbsro2 Sawyeria marylandensis cDNA,... 46 0.62 1
(AM052137) Dasytricha ruminantium EST, clone Dr07_C11. 46 0.62 1
(FE670346) mh2_0026_H08 Chickpea leave library Cicer arietin... 46 0.62 1
(FE242275) CAPG7089.fwd CAPG Naegleria gruberi amoeba stage ... 46 0.62 1
(FP102246) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.91 4
(BX323467) Zebrafish DNA sequence from clone DKEY-48N15 in l... 44 0.96 2
(AC176861) Strongylocentrotus purpuratus clone R3-3120P24, W... 44 0.99 2
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 44 1.0 2
(AC172381) Strongylocentrotus purpuratus clone R3-1004M1, WO... 42 1.1 2
(CR391948) Zebrafish DNA sequence from clone DKEY-42O15 in l... 44 1.3 3
(CU929937) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 1.3 2
(CR354607) Zebrafish DNA sequence from clone CH211-278G15 in... 38 1.4 2
(CR388373) Zebrafish DNA sequence from clone DKEY-178O8 in l... 42 1.5 2
(BJ686268) Paralabidochromis chilotes cDNA clone:no119c03. 38 1.5 2
(FC593330) CAXP7516.rev CAXP Lottia gigantea from head, foot... 34 1.7 2
(DQ273272) Allium cepa clone S1D12, *** SEQUENCING IN PROGRE... 44 2.0 3
(CR555292) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 2.1 2
(AE014829) Plasmodium falciparum 3D7 chromosome 10 section 1... 36 2.1 4
(CT788141) Paramecium tetraurelia 5-PRIME EST from clone LK0... 40 2.2 2
(CR931784) Zebrafish DNA sequence from clone DKEY-237H12 in ... 36 2.4 3
(CU683892) Zebrafish DNA sequence from clone ZFOS-335G10 in ... 44 2.5 1
(CR855321) Zebrafish DNA sequence from clone CH211-87E10 in ... 44 2.5 1
(BX663517) Zebrafish DNA sequence from clone CH211-145E12 in... 44 2.5 1
(BX629340) Zebrafish DNA sequence from clone DKEY-183O11 in ... 44 2.5 1
(BX571899) Zebrafish DNA sequence from clone DKEY-256I3 in l... 44 2.5 1
(BX511147) Zebrafish DNA sequence from clone DKEYP-36E3 in l... 44 2.5 1
(BX470150) Zebrafish DNA sequence from clone DKEY-164K14 in ... 44 2.5 1
(BX255929) Zebrafish DNA sequence from clone CH211-271P5 in ... 44 2.5 1
(BX248414) Zebrafish DNA sequence from clone CH211-236E8. 44 2.5 1
(BX247899) Zebrafish DNA sequence from clone CH211-229B6 in ... 44 2.5 1
(BX088695) Zebrafish DNA sequence from clone DKEY-18E5 in li... 44 2.5 1
(BX005412) Zebrafish DNA sequence from clone DKEY-23O4 in li... 44 2.5 1
(BX004822) Zebrafish DNA sequence from clone DKEY-18F18. 44 2.5 1
(BX000991) Zebrafish DNA sequence from clone CH211-203L7 in ... 44 2.5 1
(AL845359) Zebrafish DNA sequence from clone CH211-11M22 in ... 44 2.5 1
(AL772250) Zebrafish DNA sequence from clone CH211-160M22 in... 44 2.5 1
(AC212789) Macaca mulatta BAC CH250-285M20 (Children's Hosp... 44 2.5 1
(AC210126) Macaca mulatta BAC CH250-213E5 (Children's Hospi... 44 2.5 1
(AC198104) MACACA MULATTA BAC clone CH250-357M16 from chromo... 44 2.5 1
(AC188565) Pan troglodytes BAC clone CH251-588C7 from chromo... 44 2.5 1
(AC146163) Pan troglodytes BAC clone RP43-24D16 from chromos... 44 2.5 1
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ... 44 2.5 1
(FB596838) Sequence 12561 from Patent WO2004081186. 44 2.5 1
(DL266799) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS. 44 2.5 1
(DL174135) Enzyme and SNP marker for disease. 44 2.5 1
(DJ133248) Method for identification of useful proteins deri... 44 2.5 1
(AX590980) Sequence 420 from Patent WO02086113. 44 2.5 1
(GM049169) Sequence 1005 from Patent WO2007026255. 44 2.5 1
(GC815387) Sequence 130632 from patent US 6812339. 44 2.5 1
(GC815386) Sequence 130631 from patent US 6812339. 44 2.5 1
(GC815385) Sequence 130630 from patent US 6812339. 44 2.5 1
(GC815384) Sequence 130629 from patent US 6812339. 44 2.5 1
(GC700180) Sequence 15425 from patent US 6812339. 44 2.5 1
(CR382398) Plasmodium falciparum chromosome 6, complete sequ... 44 2.5 1
(CP000223) Drosophila melanogaster genomic scaffold 21100002... 44 2.5 1
(AY160093) Dictyostelium discoideum nucleotide exchange fact... 44 2.5 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 44 2.5 1
(AL390857) Human DNA sequence from clone RP11-51N22 on chrom... 44 2.5 1
(AL160153) Human DNA sequence from clone RP11-397O8 on chrom... 44 2.5 1
(AL096802) Human DNA sequence from clone GS1-13C1 on chromos... 44 2.5 1
(AE014303) Homo sapiens chromosome 13q34 schizophrenia regio... 44 2.5 1
(AC107387) Homo sapiens BAC clone RP11-321I11 from 2, comple... 44 2.5 1
(AC007316) Homo sapiens BAC clone RP11-356B17 from 7, comple... 44 2.5 1
(AC149972) Strongylocentrotus purpuratus clone R3-32A16, WOR... 44 2.5 1
(AC130615) Rattus norvegicus clone CH230-12A13, WORKING DRAF... 44 2.5 1
(AC123962) Magnaporthe grisea chromosome 7 clone 01D19, *** ... 44 2.5 1
(AC122611) Rattus norvegicus clone CH230-45H4, *** SEQUENCIN... 44 2.5 1
(AC111605) Rattus norvegicus clone CH230-181F1, *** SEQUENCI... 44 2.5 1
(AC106591) Rattus norvegicus clone CH230-212K18, *** SEQUENC... 44 2.5 1
(AC104074) Homo sapiens chromosome UNK clone RP11-370G4, WOR... 44 2.5 1
(AC098163) Rattus norvegicus clone CH230-16J17, *** SEQUENCI... 44 2.5 1
(CU929412) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 2.5 1
(CU914145) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 2.5 1
(AC046156) Homo sapiens chromosome 3p clone RP11-691n10, WOR... 44 2.5 1
(CT025902) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 2.5 1
(CT025866) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 2.5 1
(CR925721) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 44 2.5 1
(BX546472) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 2.5 1
(AC222461) Bos taurus clone CH240-418O15, WORKING DRAFT SEQU... 44 2.5 1
(AC220916) Pongo abelii chromosome UNKNOWN clone CH276-212F1... 44 2.5 1
(AC219115) Macaca mulatta clone CH250-85F19, WORKING DRAFT S... 44 2.5 1
(AC209447) Macaca mulatta clone CH250-317A11, WORKING DRAFT ... 44 2.5 1
(AC206915) Homo sapiens chromosome UNK clone ABC9-45471300H1... 44 2.5 1
(AC205188) Macaca mulatta chromosome UNKNOWN clone CH250-285... 44 2.5 1
(AC184268) Strongylocentrotus purpuratus clone R3-12M10, WOR... 44 2.5 1
(AC181720) Strongylocentrotus purpuratus clone R3-1039G14, W... 44 2.5 1
(AC181109) Strongylocentrotus purpuratus clone R3-3042N16, W... 44 2.5 1
(AC180977) Strongylocentrotus purpuratus clone R3-3058G18, W... 44 2.5 1
(AC180233) Strongylocentrotus purpuratus clone R3-36E7, WORK... 44 2.5 1
(AC178770) Strongylocentrotus purpuratus clone R3-3001O05, W... 44 2.5 1
(AC178738) Strongylocentrotus purpuratus clone R3-13L11, WOR... 44 2.5 1
(AC178711) Strongylocentrotus purpuratus clone R3-12L17, WOR... 44 2.5 1
(AC178362) Strongylocentrotus purpuratus clone R3-3106G20, W... 44 2.5 1
(AC177955) Strongylocentrotus purpuratus clone R3-3049C24, W... 44 2.5 1
(AC176933) Strongylocentrotus purpuratus clone R3-33L24, WOR... 44 2.5 1
(AC175923) Strongylocentrotus purpuratus clone R3-12L10, WOR... 44 2.5 1
(AC173512) Bos taurus clone CH240-301F21, WORKING DRAFT SEQU... 44 2.5 1
(AC168842) Strongylocentrotus purpuratus clone R3-13B19, WOR... 44 2.5 1
(AC168806) Strongylocentrotus purpuratus clone R3-13H13, WOR... 44 2.5 1
(AC168687) Strongylocentrotus purpuratus clone R3-3014J3, WO... 44 2.5 1
(AC165666) Bos taurus clone CH240-165D5, WORKING DRAFT SEQUE... 44 2.5 1
(BH177761) 010_K_20-21 SmBAC1 Schistosoma mansoni genomic cl... 44 2.5 1
(AZ194701) SP_1028_B2_B03_T7A Strongylocentrotus purpuratus,... 44 2.5 1
(EK350214) 1095467881763 Global-Ocean-Sampling_GS-31-01-01-1... 44 2.5 1
(EK340231) 1095467059127 Global-Ocean-Sampling_GS-31-01-01-1... 44 2.5 1
(AL614720) T7 end of clone 010BF10 of library SmBAC1 from st... 44 2.5 1
(EI775245) PM1009F16TR BAC library from the prostate metasta... 44 2.5 1
(AL065339) Drosophila melanogaster genome survey sequence TE... 44 2.5 1
(AL055553) Drosophila melanogaster genome survey sequence T7... 44 2.5 1
(CR956462) Equus caballus GSS, BAC clone CH241-113M5, T7 end... 44 2.5 1
(AG732014) Macaca fuscata fuscata DNA, clone: MSB2-187N12_R,... 44 2.5 1
(DY542532) HPO-N-S01-0505-LF Hematopoietic cDNA library Pena... 44 2.5 1
(AM051747) Dasytricha ruminantium EST, clone Dr02_F08. 44 2.5 1
(BM274003) PfESToaa62e05.y1 Plasmodium falciparum 3D7 gameto... 44 2.5 1
(BM273777) PfESToaa59d09.y1 Plasmodium falciparum 3D7 gameto... 44 2.5 1
(BJ401943) Dictyostelium discoideum cDNA clone:dds19l22, 3' ... 44 2.5 1
(BJ371220) Dictyostelium discoideum cDNA clone:ddc57j06, 5' ... 44 2.5 1
(BJ335227) Dictyostelium discoideum cDNA clone:dda49m07, 5' ... 44 2.5 1
(FK885842) EST_crog_evp_908565 crog_evp Caligus rogercressey... 44 2.5 1
(EY350819) CAWZ17793.rev CAWZ Helobdella robusta Primary Lat... 44 2.5 1
(EY309847) CAWX21820.rev CAWX Helobdella robusta Primary Ear... 44 2.5 1
(EY296131) CAWX12639.fwd CAWX Helobdella robusta Primary Ear... 44 2.5 1
(EY296130) CAWX12639.rev CAWX Helobdella robusta Primary Ear... 44 2.5 1
(EY292052) CAWX10341.rev CAWX Helobdella robusta Primary Ear... 44 2.5 1
(EV431647) 210805464 NVP Nasonia vitripennis cDNA clone 222G... 44 2.5 1
(EV430621) 210799134 NVP Nasonia vitripennis cDNA clone 222G... 44 2.5 1
(ES649745) NVPT437TR NVPP Nasonia vitripennis cDNA, mRNA seq... 44 2.5 1
(ES635168) NVPB506TR NVPA Nasonia vitripennis cDNA, mRNA seq... 44 2.5 1
(BX530723) Zebrafish DNA sequence from clone DKEYP-119B4 in ... 42 3.6 2
(EA033536) Sequence 38 from patent US 7144701. 38 3.8 2
(DD220428) ECIST MICROARRAYS FOR DUAL SCREENING OF DNA HYPER... 38 3.8 2
(AR374386) Sequence 38 from patent US 6605432. 38 3.8 2
(Z98745) Human DNA sequence from clone RP1-29K1 on chromosom... 38 3.8 2
(CR626879) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 4.3 3
(AC212632) Solanum lycopersicum chromosome 7 clone C07HBa012... 32 4.4 4
(BX927393) Zebrafish DNA sequence from clone CH211-231B2 in ... 42 4.4 2
(CP000119) Anabaena variabilis ATCC 29413 plasmid A, complet... 30 4.4 2
(CU062635) Zebrafish DNA sequence from clone DKEY-95B21 in l... 42 4.7 3
(AU053344) Dictyostelium discoideum slug cDNA, clone SLI432. 34 4.7 2
(AC231551) Mustela putorius furo clone CH237-32H13, WORKING ... 40 4.7 2
(CR361552) Zebrafish DNA sequence from clone CH211-239J15 in... 42 4.8 2
(CU457775) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 4.8 2
(AC213152) Populus trichocarpa clone POP016-F22, complete se... 38 4.9 2
(AC005678) Homo sapiens PAC clone RP11-569I24 from 7, comple... 38 5.3 2
(BF711650) MI-P-E6-ace-d-01-1-UM.s1 MI-P-E6 Sus scrofa cDNA ... 34 5.4 2
(AC141144) Rattus norvegicus clone CH230-143O1, WORKING DRAF... 36 5.4 2
(BX897693) Zebrafish DNA sequence from clone CH211-147C1 in ... 34 5.5 3
(AC174784) Bos taurus clone CH240-199H23, WORKING DRAFT SEQU... 36 5.6 4
(CU656038) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 5.7 2
(BX248100) Zebrafish DNA sequence from clone CH211-222O11 in... 42 6.2 2
(AC069257) Homo sapiens 3 BAC RP11-447L10 (Roswell Park Canc... 36 6.3 3
(AC179093) Strongylocentrotus purpuratus clone R3-4011B12, W... 42 6.4 2
(AJ930349) Theileria annulata EST, clone ta0077F01_2_b. 38 6.4 2
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 42 6.4 3
(FH571996) CHO_OF4239xe01r1.ab1 CHO_OF4 Nicotiana tabacum ge... 38 6.7 2
(AC100031) Mus musculus clone RP23-30O3, LOW-PASS SEQUENCE S... 36 6.9 2
(BX649429) Zebrafish DNA sequence from clone DKEY-1H4 in lin... 42 7.2 2
(BW636499) Dugesia ryukyuensis mRNA, clone: Dr_sW_005_K07, 5... 34 7.6 2
(AC180464) Strongylocentrotus purpuratus clone R3-3102G21, W... 36 7.6 2
(FI215802) CccaBa054-M18TR CccABa Cajanus cajan genomic clon... 36 8.0 2
(CT027824) Zebrafish DNA sequence from clone DKEY-232N5 in l... 38 8.8 4
(BX005176) Zebrafish DNA sequence from clone CH211-106N13 in... 42 8.9 4
(EJ354231) 1092963619995 Global-Ocean-Sampling_GS-28-01-01-1... 36 9.1 2
(U67923) Dictyostelium discoideum (pXi) mRNA, partial cds. 34 9.3 2
(AC179476) Strongylocentrotus purpuratus clone R3-63L7, WORK... 42 9.5 3
(CU914144) Zebrafish DNA sequence from clone ZFOS-1056B4 in ... 42 9.7 1
(CU861513) Zebrafish DNA sequence from clone CH73-145N13. 42 9.7 1
(CU693375) Zebrafish DNA sequence from clone CH211-59P9 in l... 42 9.7 1
(CU682777) Zebrafish DNA sequence from clone CH73-269M23 in ... 42 9.7 1
(CU655828) Zebrafish DNA sequence from clone CH1073-132M13 C... 42 9.7 1
(CU633783) Zebrafish DNA sequence from clone CH73-253N14 in ... 42 9.7 1
(CU633477) Zebrafish DNA sequence from clone CH73-87C18 in l... 42 9.7 1
(CU571251) Zebrafish DNA sequence from clone CH73-178H11 in ... 42 9.7 1
(CU469509) Zebrafish DNA sequence from clone CH73-144D13 in ... 42 9.7 1
(CU469093) Zebrafish DNA sequence from clone CH73-211P17 in ... 42 9.7 1
(CU467985) Zebrafish DNA sequence from clone CH73-26N20 in l... 42 9.7 1
(CU467964) Zebrafish DNA sequence from clone DKEY-225N22 in ... 42 9.7 1
(CU467655) Zebrafish DNA sequence from clone DKEY-88E18 in l... 42 9.7 1
(CU464112) Zebrafish DNA sequence from clone CH211-122M3 in ... 42 9.7 1
(CU462909) Zebrafish DNA sequence from clone RP71-8I12 in li... 42 9.7 1
(CU459013) Zebrafish DNA sequence from clone CH73-57K5 in li... 42 9.7 1
(CU457819) Zebrafish DNA sequence from clone CH73-368J24 in ... 42 9.7 1
(CU457793) Zebrafish DNA sequence from clone DKEY-181I1 in l... 42 9.7 1
(CU367849) Zebrafish DNA sequence from clone CH73-344P5 in l... 42 9.7 1
(CU302202) Zebrafish DNA sequence from clone DKEY-156M2 in l... 42 9.7 1
(CU137682) Zebrafish DNA sequence from clone DKEY-197A14 in ... 42 9.7 1
(CU062431) Zebrafish DNA sequence from clone DKEY-194J22 in ... 42 9.7 1
(CT998561) Zebrafish DNA sequence from clone DKEYP-13B9 in l... 42 9.7 1
(CT737163) Zebrafish DNA sequence from clone DKEYP-3G2 in li... 42 9.7 1
(CT737154) Zebrafish DNA sequence from clone DKEY-168A14 in ... 42 9.7 1
(CT583723) Zebrafish DNA sequence from clone DKEY-33B17 in l... 42 9.7 1
(CT573429) Zebrafish DNA sequence from clone CH73-233K15 in ... 42 9.7 1
(CT033817) Zebrafish DNA sequence from clone CH211-216D10 in... 42 9.7 1
(CT027987) Zebrafish DNA sequence from clone CH211-247E2 in ... 42 9.7 1
(CT027674) Zebrafish DNA sequence from clone CH211-57L19 in ... 42 9.7 1
(CT025925) Zebrafish DNA sequence from clone CH73-292B4 in l... 42 9.7 1
(CT009603) Zebrafish DNA sequence from clone CH73-346N20 in ... 42 9.7 1
(CR936499) Zebrafish DNA sequence from clone CH211-130N3 in ... 42 9.7 1
(CR931783) Zebrafish DNA sequence from clone DKEY-28D7 in li... 42 9.7 1
(CR855137) Zebrafish DNA sequence from clone CH211-37E10 in ... 42 9.7 1
(CR853302) Zebrafish DNA sequence from clone DKEY-91M3 in li... 42 9.7 1
(CR848814) Zebrafish DNA sequence from clone CH211-167J9 in ... 42 9.7 1
(CR848750) Zebrafish DNA sequence from clone RP71-4B23 in li... 42 9.7 1
(CR848707) Zebrafish DNA sequence from clone CH211-276P5 in ... 42 9.7 1
(CR847971) Zebrafish DNA sequence from clone CH211-147M20 in... 42 9.7 1
(CR847946) Zebrafish DNA sequence from clone CH211-274N1 in ... 42 9.7 1
(CR847882) Zebrafish DNA sequence from clone RP71-18L21 in l... 42 9.7 1
(CR847806) Zebrafish DNA sequence from clone CH211-267J10 in... 42 9.7 1
(CR792456) Zebrafish DNA sequence from clone RP71-18A8 in li... 42 9.7 1
(CR589884) Zebrafish DNA sequence from clone CH211-206L14 in... 42 9.7 1
(CR556723) Zebrafish DNA sequence from clone CH211-176K6 in ... 42 9.7 1
(CR548631) Zebrafish DNA sequence from clone CH211-117I20 in... 42 9.7 1
(CR533578) Zebrafish DNA sequence from clone CH211-216F21 in... 42 9.7 1
(CR450840) Zebrafish DNA sequence from clone CH211-261D9 in ... 42 9.7 1
(CR450829) Zebrafish DNA sequence from clone CH211-197G2 in ... 42 9.7 1
(CR407562) Zebrafish DNA sequence from clone DKEY-161J6 in l... 42 9.7 1
(CR388072) Zebrafish DNA sequence from clone DKEY-113P2 in l... 42 9.7 1
(CR388023) Zebrafish DNA sequence from clone DKEY-245J10 in ... 42 9.7 1
(CR387991) Zebrafish DNA sequence from clone CH211-285C3 in ... 42 9.7 1
(CR387981) Zebrafish DNA sequence from clone DKEY-107I9 in l... 42 9.7 1
(CR383672) Zebrafish DNA sequence from clone DKEY-11P10 in l... 42 9.7 1
(CR376844) Zebrafish DNA sequence from clone DKEYP-51B7 in l... 42 9.7 1
(CR339051) Zebrafish DNA sequence from clone DKEY-223N8 in l... 42 9.7 1
(CR318657) Zebrafish DNA sequence from clone DKEY-114G7 in l... 42 9.7 1
(CR318606) Zebrafish DNA sequence from clone CH211-207N1 in ... 42 9.7 1
(CR318596) Zebrafish DNA sequence from clone DKEY-104N16 in ... 42 9.7 1
(CR293504) Zebrafish DNA sequence from clone CH211-147G3 in ... 42 9.7 1
(BX957316) Zebrafish DNA sequence from clone CH211-120B19 in... 42 9.7 1
(BX957241) Zebrafish DNA sequence from clone CH211-197N10 in... 42 9.7 1
(BX936364) Zebrafish DNA sequence from clone CH211-247G11 in... 42 9.7 1
(BX936345) Zebrafish DNA sequence from clone DKEY-118M15 in ... 42 9.7 1
(BX927185) Zebrafish DNA sequence from clone CH211-198G1 in ... 42 9.7 1
(BX927095) Zebrafish DNA sequence from clone CH211-202E13 in... 42 9.7 1
(BX927081) Zebrafish DNA sequence from clone DKEYP-85H7 in l... 42 9.7 1
(BX927078) Zebrafish DNA sequence from clone CH211-284J7 in ... 42 9.7 1
(BX908384) Zebrafish DNA sequence from clone DKEY-38K3 in li... 42 9.7 1
(BX901942) Zebrafish DNA sequence from clone DKEY-121B10 in ... 42 9.7 1
(BX890591) Zebrafish DNA sequence from clone DKEY-184J23 in ... 42 9.7 1
(BX664607) Zebrafish DNA sequence from clone CH211-132B12 in... 42 9.7 1
(BX649501) Zebrafish DNA sequence from clone DKEY-123F20 in ... 42 9.7 1
(BX649484) Zebrafish DNA sequence from clone CH211-197H24 in... 42 9.7 1
(BX649457) Zebrafish DNA sequence from clone DKEYP-87E7 in l... 42 9.7 1
(BX649370) Zebrafish DNA sequence from clone DKEY-97I11 in l... 42 9.7 1
(BX649245) Zebrafish DNA sequence from clone CH211-213C4 in ... 42 9.7 1
(BX640470) Zebrafish DNA sequence from clone CH211-205H10 in... 42 9.7 1
(BX629343) Zebrafish DNA sequence from clone DKEY-66M17 in l... 42 9.7 1
(BX571973) Zebrafish DNA sequence from clone DKEY-254A11 in ... 42 9.7 1
(BX548002) Zebrafish DNA sequence from clone CH211-170I2 in ... 42 9.7 1
(BX537143) Zebrafish DNA sequence from clone CH211-86H15 in ... 42 9.7 1
(BX537130) Zebrafish DNA sequence from clone DKEY-104I23 in ... 42 9.7 1
(BX537118) Zebrafish DNA sequence from clone CH211-202N8 in ... 42 9.7 1
(BX530079) Zebrafish DNA sequence from clone DKEY-51A16 in l... 42 9.7 1
(BX470100) Zebrafish DNA sequence from clone DKEY-239K7 in l... 42 9.7 1
(BX323883) Zebrafish DNA sequence from clone CH211-285M21 in... 42 9.7 1
(BX322795) Zebrafish DNA sequence from clone CH211-106E12 in... 42 9.7 1
(BX322577) Zebrafish DNA sequence from clone RP71-52F21 in l... 42 9.7 1
(BX294167) Zebrafish DNA sequence from clone CH211-244O18 in... 42 9.7 1
(BX255941) Zebrafish DNA sequence from clone BUSM1-182C22 in... 42 9.7 1
(BX255893) Zebrafish DNA sequence from clone CH211-272H10 in... 42 9.7 1
(BX255881) Zebrafish DNA sequence from clone CH211-268E23 in... 42 9.7 1
(BX248080) Zebrafish DNA sequence from clone CH211-226C1 in ... 42 9.7 1
(BX120011) Zebrafish DNA sequence from clone DKEY-18O5 in li... 42 9.7 1
(BX119963) Zebrafish DNA sequence from clone DKEY-6A5 in lin... 42 9.7 1
(BX005437) Zebrafish DNA sequence from clone CH211-158M21 in... 42 9.7 1
(BX005382) Zebrafish DNA sequence from clone DKEY-242E14. 42 9.7 1
(BX005044) Zebrafish DNA sequence from clone DKEY-7L6 in lin... 42 9.7 1
(BX004838) Zebrafish DNA sequence from clone DKEY-29N1 in li... 42 9.7 1
(BX004817) Zebrafish DNA sequence from clone DKEY-169B7 in l... 42 9.7 1
(BX000460) Zebrafish DNA sequence from clone CH211-15E22 in ... 42 9.7 1
(BX000363) Zebrafish DNA sequence from clone CH211-10K11 in ... 42 9.7 1
(AL935202) Zebrafish DNA sequence from clone CH211-197E11 in... 42 9.7 1
(AL929379) Zebrafish DNA sequence from clone CH211-156H6. 42 9.7 1
(AL929243) Zebrafish DNA sequence from clone DKEYP-15G8. 42 9.7 1
(AL929135) Zebrafish DNA sequence from clone CH211-125A22 in... 42 9.7 1
(AL929109) Zebrafish DNA sequence from clone CH211-134D6. 42 9.7 1
(AL929103) Zebrafish DNA sequence from clone CH211-122O8. 42 9.7 1
(AL928901) Zebrafish DNA sequence from clone CH211-155M12 in... 42 9.7 1
(AL928828) Zebrafish DNA sequence from clone CH211-30I2 in l... 42 9.7 1
(AL928676) Zebrafish DNA sequence from clone DKEY-121K17. 42 9.7 1
(AL845369) Zebrafish DNA sequence from clone CH211-12E13 in ... 42 9.7 1
(AL831721) Zebrafish DNA sequence from clone CH211-211O10 in... 42 9.7 1
(AL772274) Zebrafish DNA sequence from clone CH211-196D14 in... 42 9.7 1
(AL645755) Zebrafish DNA sequence from clone RP71-1N18 in li... 42 9.7 1
(AL627256) Zebrafish DNA sequence from clone RP71-1L10 in li... 42 9.7 1
(AL627168) Zebrafish DNA sequence from clone RP71-1M12 in li... 42 9.7 1
(AL627094) Zebrafish DNA sequence from clone RP71-PACKTRZ in... 42 9.7 1
(BN000872) TPA: Mus musculus immunoglobulin heavy chain vari... 42 9.7 1
(BV610653) S216P61669FA8.T0 Masuku Pan troglodytes troglodyt... 42 9.7 1
(BV326378) S241P6183FH2.T0 IndiaGrayWolf Canis lupus STS gen... 42 9.7 1
(CT025584) Mouse DNA sequence from clone RP23-78N7 on chromo... 42 9.7 1
(AL837507) Mouse DNA sequence from clone RP23-267B2 on chrom... 42 9.7 1
(AL773534) Mouse DNA sequence from clone RP23-183O12 on chro... 42 9.7 1
(AL683847) Mouse DNA sequence from clone RP23-109A3 on chrom... 42 9.7 1
(AC170887) Mus musculus BAC clone RP24-67J21 from chromosome... 42 9.7 1
(AC166750) Mus musculus chromosome 8, clone RP23-9K18, compl... 42 9.7 1
(AC165975) Mus musculus BAC clone RP23-3L23 from chromosome ... 42 9.7 1
(AC163626) Mus musculus BAC clone RP23-137D2 from chromosome... 42 9.7 1
(AC163348) Mus musculus BAC clone RP23-230L2 from chromosome... 42 9.7 1
(AC160135) Mus musculus BAC clone RP23-160P11 from chromosom... 42 9.7 1
(AC160113) Mus musculus BAC clone RP24-84O12 from chromosome... 42 9.7 1
(AC158594) Mus musculus 10 BAC RP23-197I5 (Roswell Park Canc... 42 9.7 1
(AC157564) Mus musculus chromosome 8, clone RP23-363J16, com... 42 9.7 1
(AC153520) Mus musculus 10 BAC RP23-144O19 (Roswell Park Can... 42 9.7 1
(AC114915) Mus musculus BAC clone RP23-54K21 from 2, complet... 42 9.7 1
(AC025047) Mus musculus chromosome 1, clone RP23-56I8, compl... 42 9.7 1
(AC215550) Macaca mulatta BAC CH250-122N22 (Children's Hosp... 42 9.7 1
(AC214202) Macaca mulatta BAC CH250-203N7 (Children's Hospi... 42 9.7 1
(AC197800) MACACA MULATTA BAC clone CH250-262J20 from chromo... 42 9.7 1
(FM992693) Candida dubliniensis CD36 chromosome 6, complete ... 42 9.7 1
(DQ987600) Vitis vinifera stilbene synthase gene, promoter r... 42 9.7 1
(AP008214) Oryza sativa (japonica cultivar-group) genomic DN... 42 9.7 1
(AP008208) Oryza sativa (japonica cultivar-group) genomic DN... 42 9.7 1
(AP007171) Aspergillus oryzae RIB40 genomic DNA, SC011. 42 9.7 1
(AP005816) Oryza sativa Japonica Group genomic DNA, chromoso... 42 9.7 1
(AP005254) Oryza sativa Japonica Group genomic DNA, chromoso... 42 9.7 1
(AP005111) Oryza sativa Japonica Group genomic DNA, chromoso... 42 9.7 1
(AP004028) Oryza sativa Japonica Group genomic DNA, chromoso... 42 9.7 1
(AM480038) Vitis vinifera contig VV78X147942.2, whole genome... 42 9.7 1
(AM464146) Vitis vinifera contig VV78X271996.5, whole genome... 42 9.7 1
(AM459697) Vitis vinifera contig VV78X010546.15, whole genom... 42 9.7 1
(AM445493) Vitis vinifera contig VV78X143789.5, whole genome... 42 9.7 1
(AC215623) Populus trichocarpa clone POP004-A06, complete se... 42 9.7 1
(AB257127) Brassica rapa BrSRK-8, BrSP11-8, BrSLG-8 genes fo... 42 9.7 1
(FB669714) Sequence 359 from Patent WO2007144105. 42 9.7 1
(EA685154) Sequence 64033 from patent US 7365185. 42 9.7 1
(CQ584915) Sequence 12673 from Patent WO0171042. 42 9.7 1
(GC886168) Sequence 201413 from patent US 6812339. 42 9.7 1
(GC886054) Sequence 201299 from patent US 6812339. 42 9.7 1
(GC852444) Sequence 167689 from patent US 6812339. 42 9.7 1
(GC852337) Sequence 167582 from patent US 6812339. 42 9.7 1
(GC701222) Sequence 16467 from patent US 6812339. 42 9.7 1
(GC701221) Sequence 16466 from patent US 6812339. 42 9.7 1
(CU466306) Platypus DNA sequence from clone CLM1-102P15. 42 9.7 1
(AC170742) Sorex araneus clone SA_Ba-580J7, complete sequence. 42 9.7 1
(Z81094) Caenorhabditis elegans Cosmid F58G11. 42 9.7 1
(CR382400) Plasmodium falciparum chromosome 6, complete sequ... 42 9.7 1
(CP000192) Drosophila melanogaster genomic scaffold 21100002... 42 9.7 1
(AY183918) Drosophila melanogaster centromeric satellite seq... 42 9.7 1
(AY170918) Dictyostelium discoideum pats1 gene, partial cds. 42 9.7 1
(AL929354) Plasmodium falciparum strain 3D7, chromosome 5, s... 42 9.7 1
(AL929351) Plasmodium falciparum strain 3D7, chromosome 5, s... 42 9.7 1
(AL121804) Drosophila melanogaster BAC clone BACR7C10. 42 9.7 1
(AF482961) Dictyostelium discoideum ABC transporter AbcH.2 (... 42 9.7 1
(AF365402) Drosophila melanogaster HMS-Beagle transposable e... 42 9.7 1
(AF310895) Dictyostelium discoideum RIM (rimA) and RacI (rac... 42 9.7 1
(AF102575) Dictyostelium discoideum cell surface protein DTF... 42 9.7 1
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8... 42 9.7 1
(AE014298) Drosophila melanogaster chromosome X, complete se... 42 9.7 1
(AE014297) Drosophila melanogaster chromosome 3R, complete s... 42 9.7 1
(AE014134) Drosophila melanogaster chromosome 2L, complete s... 42 9.7 1
(AE013599) Drosophila melanogaster chromosome 2R, complete s... 42 9.7 1
(AC171134) Helobdella robusta clone CH306-1A5, complete sequ... 42 9.7 1
(AC171131) Helobdella robusta clone CH306-1A2, complete sequ... 42 9.7 1
(AC171127) Helobdella robusta clone CH306-1A1, complete sequ... 42 9.7 1
(AC158490) Capitella capitata clone JGIAUTO-1A3, complete se... 42 9.7 1
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 42 9.7 1
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 42 9.7 1
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 42 9.7 1
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 42 9.7 1
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 42 9.7 1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 42 9.7 1
(AC104511) Drosophila melanogaster X BAC RP98-39D14 (Roswell... 42 9.7 1
(AC104510) Drosophila melanogaster X BAC RP98-26J12 (Roswell... 42 9.7 1
(AC104140) Drosophila melanogaster X BAC RP98-9H13 (Roswell ... 42 9.7 1
(AC093439) Drosophila melanogaster clone BACR28A12, complete... 42 9.7 1
(AC093177) Drosophila melanogaster, chromosome 2L, region 36... 42 9.7 1
(AC012646) Drosophila melanogaster, chromosome 3R, region 85... 42 9.7 1
(AC009744) Drosophila melanogaster clone BACR06G16, complete... 42 9.7 1
(AC009214) Drosophila melanogaster clone BACR05E09, complete... 42 9.7 1
(AC009212) Drosophila melanogaster, chromosome 3R, region 82... 42 9.7 1
(AC008326) Drosophila melanogaster, chromosome 2L, region 27... 42 9.7 1
(AC007977) Drosophila melanogaster, chromosome 2L, region 27... 42 9.7 1
(AC007852) Drosophila melanogaster clone BACR33A10, complete... 42 9.7 1
(AC007589) Drosophila melanogaster clone BACR20D10, complete... 42 9.7 1
(AC007571) Drosophila melanogaster, chromosome 3R, region 85... 42 9.7 1
(AC007185) Drosophila melanogaster, chromosome 2L, region 36... 42 9.7 1
(AC004563) Drosophila melanogaster DNA sequence (P1 DS06300 ... 42 9.7 1
(AP001576) Homo sapiens genomic DNA, chromosome 6q25.2, clon... 42 9.7 1
(AP000888) Homo sapiens genomic DNA, chromosome 6q25.2, clon... 42 9.7 1
(AL391833) Human DNA sequence from clone RP11-307K1 on chrom... 42 9.7 1
(AL135929) Human DNA sequence from clone RP4-801G22 on chrom... 42 9.7 1
(AL031777) Human DNA sequence from clone RP1-34B20 on chromo... 42 9.7 1
(AC108721) Homo sapiens 12 BAC RP11-272B17 (Roswell Park Can... 42 9.7 1
(AC108360) Homo sapiens 12q BAC RP11-29C9 (Roswell Park Canc... 42 9.7 1
(AC098935) Homo sapiens chromosome 1 clone RP11-564A8, compl... 42 9.7 1
(AC092823) Homo sapiens 12 BAC RP11-235A16 (Roswell Park Can... 42 9.7 1
(AC017091) Homo sapiens BAC clone RP11-506N2 from 4, complet... 42 9.7 1
(AC010387) Homo sapiens chromosome 5 clone CTD-2074D8, compl... 42 9.7 1
(AC007198) Homo sapiens, clone 18_A_13, complete sequence. 42 9.7 1
(AC151866) Ornithorhynchus anatinus clone DP-27M2, WORKING D... 42 9.7 1
(AC149106) Papio anubis clone RP41-137C10, WORKING DRAFT SEQ... 42 9.7 1
(AC146984) Strongylocentrotus purpuratus clone R3-40I9, WORK... 42 9.7 1
(AC135817) Rattus norvegicus clone CH230-330C1, *** SEQUENCI... 42 9.7 1
(AC134094) Rattus norvegicus clone CH230-34B17, *** SEQUENCI... 42 9.7 1
(AC131513) Strongylocentrotus purpuratus clone Sp91A10, *** ... 42 9.7 1
(AC130580) Rattus norvegicus clone CH230-198B19, WORKING DRA... 42 9.7 1
(AC130140) Rattus norvegicus clone CH230-187O5, *** SEQUENCI... 42 9.7 1
(AC127726) Rattus norvegicus clone CH230-402A14, WORKING DRA... 42 9.7 1
(AC126292) Rattus norvegicus clone CH230-127A16, WORKING DRA... 42 9.7 1
(AC116537) Drosophila melanogaster chromosome X clone RP98-9... 42 9.7 1
(AC102192) Mus musculus clone RP24-284B6, WORKING DRAFT SEQU... 42 9.7 1
(AC099142) Rattus norvegicus clone CH230-51G12, *** SEQUENCI... 42 9.7 1
(AC095011) Rattus norvegicus clone CH230-6L9, *** SEQUENCING... 42 9.7 1
(FP103072) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(FP102918) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 9.7 1
(FP085406) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(FP074903) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(FP016221) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 9.7 1
(CU929362) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CU896659) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CU896657) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CU896653) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CU856157) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CU640375) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 9.7 1
(CU571258) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 42 9.7 1
(CU469502) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(AC092382) Homo sapiens chromosome 5 clone RP11-75H1, WORKIN... 42 9.7 1
(AC079529) Mus musculus clone RP23-338C7, WORKING DRAFT SEQU... 42 9.7 1
(AC079426) Mus musculus chromosome 16 clone RP23-115J16, WOR... 42 9.7 1
(AC073771) Mus musculus clone RP23-363J16, WORKING DRAFT SEQ... 42 9.7 1
(AC060776) Homo sapiens chromosome 12 clone RP11-272B17 map ... 42 9.7 1
(AC027549) Homo sapiens chromosome 5 clone RP11-31A4 map 5, ... 42 9.7 1
(CU466948) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 9.7 1
(CU463234) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CU424438) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 9.7 1
(CU302412) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CU280367) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CU183096) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 42 9.7 1
(CU019635) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 42 9.7 1
(CT737207) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CT583676) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CT573173) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 42 9.7 1
(CT033805) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CT030007) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CT027667) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CT025921) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CT009688) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CT009666) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 42 9.7 1
(CR931791) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CR854886) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CR456622) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(CR376828) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(BX957364) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(BX890561) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 42 9.7 1
(BX640544) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(BX530093) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 42 9.7 1
(BX470165) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 42 9.7 1
(BX323999) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 42 9.7 1
(BX321918) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.7 1
(AL844509) Plasmodium falciparum chromosome 13. 42 9.7 1
(AL844506) Plasmodium falciparum chromosome 7. 42 9.7 1
(AL359892) Human DNA sequence *** SEQUENCING CANCELLED *** f... 42 9.7 1
(AL353721) Human DNA sequence *** SEQUENCING CANCELLED *** f... 42 9.7 1
(AC225543) Medicago truncatula clone mth2-72c14, WORKING DRA... 42 9.7 1
(AC224080) Bos taurus clone CH240-450F6, WORKING DRAFT SEQUE... 42 9.7 1

>(BJ399465) Dictyostelium discoideum cDNA clone:dds6j01, 3' end,
single read.
Length = 258

Score = 347 bits (175), Expect = 1e-91
Identities = 175/175 (100%)
Strand = Plus / Minus


Query: 83 attctccaaataataatatcaataataatgtaaactataataaaactagaaagtatctta 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 attctccaaataataatatcaataataatgtaaactataataaaactagaaagtatctta 117


Query: 143 taaatggagtaattggtgcatctttattgggcggatcgttattttatagagaaagaaagt 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 taaatggagtaattggtgcatctttattgggcggatcgttattttatagagaaagaaagt 57


Query: 203 caatttatcttttaacaggcggtttatggcttaacaaaggtttattaatatttaa 257
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 caatttatcttttaacaggcggtttatggcttaacaaaggtttattaatatttaa 2

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 266,957,131
Number of extensions: 17848748
Number of successful extensions: 1536650
Number of sequences better than 10.0: 762
Length of query: 257
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 234
Effective length of database: 99,442,330,388
Effective search space: 23269505310792
Effective search space used: 23269505310792
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 7.28
Homology vs Protein
Query= Contig-U03447-1 (Contig-U03447-1Q) /CSM_Contig/Contig-U03447-1Q.Seq.d
(257 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

***** No hits found ******

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 246,459,718
Number of extensions: 3506405
Number of successful extensions: 5865
Number of sequences better than 10.0: 0
Number of HSP's gapped: 5865
Number of HSP's successfully gapped: 0
Length of query: 85
Length of database: 1,061,185,681
Length adjustment: 55
Effective length of query: 30
Effective length of database: 881,421,041
Effective search space: 26442631230
Effective search space used: 26442631230
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 27 (15.0 bits)

PSORT

psg: 0.85 gvh: 0.52 alm: 0.37 top: 0.67 tms: 0.00 mit: 0.49 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

64.0 %: mitochondrial
24.0 %: nuclear
8.0 %: cytoplasmic
4.0 %: cytoskeletal

>> prediction for Contig-U03447-1 is mit

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0