Contig-U03440-1
Contig ID Contig-U03440-1
Contig update 2002. 9.13
Contig sequence
>Contig-U03440-1 (Contig-U03440-1Q) /CSM_Contig/Contig-U03440-1Q.Seq.d
ATTTTGAATAAAATTTAAATTTCTTACAATTGGAAAAGCACACACACACA
CCCACACTTACATATAGAGAGTAACAATGAGCAAAGAGATTTTTATTGGC
ATTGATGGTGGTGGTACAAAAACATCAACGGTTGCAGTTGATTCAAATGG
TCAAGAATTAGCAAGACATACATCACCATGTAGTAACTATCATAGTGTTG
GTGAAGATTTAGCAAAAGCAGCAATTAACGAAGGTATAAAATATGTAATT
AGAAAAGTTAAGGAGACAATCACAGATGATGATAATAAAGAAGTTACAGT
TGGATCAATTTGTTTAGGTATGAGTGGTGTAGATAGAGAGAAAGATAAAC
TATTAGTTAAATCATGGGTAACTGAATTATTGGGAGAATCAATCAACTAC
AGCATTCACAACGATGCAATCGTAGCTTTATCAAGTGGAACTCAAGGTAA
ACTATTTGGAGTTGTCATTATCTGTGGCACAGGTTGCATTTCATTAGGAT
TCAATAGGGAGGGTGTCTCAGGCAGATCAGGTGGTTGGGGACCATTATTA
GGCGACTATGGCAGTGGCTACCAAATTGGTTACGATATCCTCAGACATGT
TTTAAAAGCAAAAGATCAAGTTGGTCCAAAAACTTCACTAACTCAAGTTT
TATTAGAAAAATTACAACTCACCAAAGAAGAAGATTTAATCTCATGGGCT
TATGATCCAAAAACTCAAAGTTGGCAAAAGTTTGCTCAATTATCACCTTT
AGCTTTTGAGCAAGCCCAATTAGGTGATGAAATTTCAAATTTAATTTTAG
TTGATGCTGCAAATGCACTTTATGATTTAATTAATAGTGTTATTAAAAAG
TTGGGATTGGATAAAGAAGAGAAATTCCCATTGGTTTATACTGGAGGAAA
TATTGAGAGAAAAGGTATTCTTTCTGATCTTTTATCCAAGAAAATTATGG
AAAATTATCCAAATGCTGAAATTTTAAATACTACTTGTGATCCTTCAATG
GGTGCTGCTTTATTGGCATTAAACTCTAAGAAATAAACTTATTTTTATCT
TTTTTTTTCCAANGAAAATATAATATAAAATAAAATAAAAATAAAAA

Gap no gap
Contig length 1097
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 1988810
End point 1989908
Strand (PLUS/MINUS) PLUS
Number of clones 3
Number of EST 4
Link to clone list U03440
List of clone(s)

est1=VFB457E,1,1062
est2=VFC880E,6,1062
est3=SFC471F,37,163
est4=SFC471Z,380,1098
Translated Amino Acid sequence
f*ikfkfltigkahththtyi*RVTMSKEIFIGIDGGGTKTSTVAVDSNGQELARHTSPC
SNYHSVGEDLAKAAINEGIKYVIRKVKETITDDDNKEVTVGSICLGMSGVDREKDKLLVK
SWVTELLGESINYSIHNDAIVALSSGTQGKLFGVVIICGTGCISLGFNREGVSGRSGGWG
PLLGDYGSGYQIGYDILRHVLKAKDQVGPKTSLTQVLLEKLQLTKEEDLISWAYDPKTQS
WQKFAQLSPLAFEQAQLGDEISNLILVDAANALYDLINSVIKKLGLDKEEKFPLVYTGGN
IERKGILSDLLSKKIMENYPNAEILNTTCDPSMGAALLALNSKK*tyfylffsxenii*n
kikik


Translated Amino Acid sequence (All Frames)
Frame A:
ilnki*isynwksththphlhiesnneqrdfywh*wwwykningcs*fkwsrisktyitm
**ls*cw*rfskssn*rrykicn*ks*gdnhr****rsyswinlfryewcr*rer*tis*
imgn*iigrinqlqhsqrcnrsfikwnsr*tiwschylwhrlhfiriq*ggclrqirwlg
tiirrlwqwlpnwlrypqtcfkskrsswsknftnssfirkitthqrrrfnlmgl*sknsk
lakvcsiitfsf*aspir**nfkfnfs*cckctl*fn**cy*kvgig*rreipiglywrk
y*ekrysf*sfiqenygklskc*nfkyyl*sfngccfigikl*einlflsfffqxkynik
*nknk


Frame B:
f*ikfkfltigkahththtyi*RVTMSKEIFIGIDGGGTKTSTVAVDSNGQELARHTSPC
SNYHSVGEDLAKAAINEGIKYVIRKVKETITDDDNKEVTVGSICLGMSGVDREKDKLLVK
SWVTELLGESINYSIHNDAIVALSSGTQGKLFGVVIICGTGCISLGFNREGVSGRSGGWG
PLLGDYGSGYQIGYDILRHVLKAKDQVGPKTSLTQVLLEKLQLTKEEDLISWAYDPKTQS
WQKFAQLSPLAFEQAQLGDEISNLILVDAANALYDLINSVIKKLGLDKEEKFPLVYTGGN
IERKGILSDLLSKKIMENYPNAEILNTTCDPSMGAALLALNSKK*tyfylffsxenii*n
kikik


Frame C:
fe*nlnflqlekhthtptltyre*q*akrfllalmvvvqkhqrlqliqmvkn*qdihhhv
vtiivlvki*qkqqltkv*nm*leklrrqsqmmiikklqldqfv*v*vv*ierkiny*ln
hg*lnywenqsttafttmqs*lyqvelkvnylelslsvaqvafh*dsigrvsqadqvvgd
hy*atmavatklvtissdmf*kqkiklvqklh*lkfy*knynspkkki*shglmiqklkv
gksllnyhl*llskpn*vmkfqi*f*lmlqmhfmi*livllkswdwikkrnshwfileei
lrekvfflifyprklwkiiqmlkf*illvilqwvllywh*tlrnklififffpxki*yki
k*k*k


own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U03440-1 (Contig-U03440-1Q)
/CSM_Contig/Contig-U03440-1Q.Seq.d
(1097 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U03440-1 (Contig-U03440-1Q) /CSM_Contig/Conti... 1966 0.0
Contig-U11036-1 (Contig-U11036-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U14097-1 (Contig-U14097-1Q) /CSM_Contig/Conti... 36 0.078
Contig-U10054-1 (Contig-U10054-1Q) /CSM_Contig/Conti... 36 0.078
Contig-U04555-1 (Contig-U04555-1Q) /CSM_Contig/Conti... 36 0.078
Contig-U13791-1 (Contig-U13791-1Q) /CSM_Contig/Conti... 34 0.31
Contig-U12551-1 (Contig-U12551-1Q) /CSM_Contig/Conti... 34 0.31
Contig-U12486-1 (Contig-U12486-1Q) /CSM_Contig/Conti... 34 0.31
Contig-U12257-1 (Contig-U12257-1Q) /CSM_Contig/Conti... 34 0.31
Contig-U12074-1 (Contig-U12074-1Q) /CSM_Contig/Conti... 34 0.31

>Contig-U03440-1 (Contig-U03440-1Q) /CSM_Contig/Contig-U03440-1Q.Seq.d
Length = 1097

Score = 1966 bits (992), Expect = 0.0
Identities = 992/992 (100%)
Strand = Plus / Plus


Query: 58 ttacatatagagagtaacaatgagcaaagagatttttattggcattgatggtggtggtac 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 ttacatatagagagtaacaatgagcaaagagatttttattggcattgatggtggtggtac 117


Query: 118 aaaaacatcaacggttgcagttgattcaaatggtcaagaattagcaagacatacatcacc 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 aaaaacatcaacggttgcagttgattcaaatggtcaagaattagcaagacatacatcacc 177


Query: 178 atgtagtaactatcatagtgttggtgaagatttagcaaaagcagcaattaacgaaggtat 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 atgtagtaactatcatagtgttggtgaagatttagcaaaagcagcaattaacgaaggtat 237


Query: 238 aaaatatgtaattagaaaagttaaggagacaatcacagatgatgataataaagaagttac 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 aaaatatgtaattagaaaagttaaggagacaatcacagatgatgataataaagaagttac 297


Query: 298 agttggatcaatttgtttaggtatgagtggtgtagatagagagaaagataaactattagt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 agttggatcaatttgtttaggtatgagtggtgtagatagagagaaagataaactattagt 357


Query: 358 taaatcatgggtaactgaattattgggagaatcaatcaactacagcattcacaacgatgc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 taaatcatgggtaactgaattattgggagaatcaatcaactacagcattcacaacgatgc 417


Query: 418 aatcgtagctttatcaagtggaactcaaggtaaactatttggagttgtcattatctgtgg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aatcgtagctttatcaagtggaactcaaggtaaactatttggagttgtcattatctgtgg 477


Query: 478 cacaggttgcatttcattaggattcaatagggagggtgtctcaggcagatcaggtggttg 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cacaggttgcatttcattaggattcaatagggagggtgtctcaggcagatcaggtggttg 537


Query: 538 gggaccattattaggcgactatggcagtggctaccaaattggttacgatatcctcagaca 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gggaccattattaggcgactatggcagtggctaccaaattggttacgatatcctcagaca 597


Query: 598 tgttttaaaagcaaaagatcaagttggtccaaaaacttcactaactcaagttttattaga 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tgttttaaaagcaaaagatcaagttggtccaaaaacttcactaactcaagttttattaga 657


Query: 658 aaaattacaactcaccaaagaagaagatttaatctcatgggcttatgatccaaaaactca 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 aaaattacaactcaccaaagaagaagatttaatctcatgggcttatgatccaaaaactca 717


Query: 718 aagttggcaaaagtttgctcaattatcacctttagcttttgagcaagcccaattaggtga 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 aagttggcaaaagtttgctcaattatcacctttagcttttgagcaagcccaattaggtga 777


Query: 778 tgaaatttcaaatttaattttagttgatgctgcaaatgcactttatgatttaattaatag 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tgaaatttcaaatttaattttagttgatgctgcaaatgcactttatgatttaattaatag 837


Query: 838 tgttattaaaaagttgggattggataaagaagagaaattcccattggtttatactggagg 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 tgttattaaaaagttgggattggataaagaagagaaattcccattggtttatactggagg 897


Query: 898 aaatattgagagaaaaggtattctttctgatcttttatccaagaaaattatggaaaatta 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 aaatattgagagaaaaggtattctttctgatcttttatccaagaaaattatggaaaatta 957


Query: 958 tccaaatgctgaaattttaaatactacttgtgatccttcaatgggtgctgctttattggc 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 tccaaatgctgaaattttaaatactacttgtgatccttcaatgggtgctgctttattggc 1017


Query: 1018 attaaactctaagaaataaacttatttttatc 1049
||||||||||||||||||||||||||||||||
Sbjct: 1018 attaaactctaagaaataaacttatttttatc 1049


Score = 75.8 bits (38), Expect = 9e-14
Identities = 38/38 (100%)
Strand = Plus / Plus


Query: 1 attttgaataaaatttaaatttcttacaattggaaaag 38
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attttgaataaaatttaaatttcttacaattggaaaag 38


>Contig-U11036-1 (Contig-U11036-1Q) /CSM_Contig/Contig-U11036-1Q.Seq.d
Length = 1347

Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus


Query: 275 gatgatgataataaagaagttacag 299
|||||||||||||||||| ||||||
Sbjct: 595 gatgatgataataaagaaattacag 619


>Contig-U14097-1 (Contig-U14097-1Q) /CSM_Contig/Contig-U14097-1Q.Seq.d
Length = 401

Score = 36.2 bits (18), Expect = 0.078
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 824 gatttaattaatagtgtt 841
||||||||||||||||||
Sbjct: 363 gatttaattaatagtgtt 380


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,314
Number of Sequences: 6905
Number of extensions: 14314
Number of successful extensions: 1675
Number of sequences better than 10.0: 201
length of query: 1097
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1081
effective length of database: 5,564,391
effective search space: 6015106671
effective search space used: 6015106671
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5.31
Homology vs DNA
Query= Contig-U03440-1 (Contig-U03440-1Q) /CSM_Contig/Contig-U03440-1Q.Seq.d
(1097 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ430351) Dictyostelium discoideum cDNA clone:ddv6p20, 3' e... 1376 0.0 1
(BJ399381) Dictyostelium discoideum cDNA clone:dds5n18, 3' e... 1328 0.0 1
(BJ429443) Dictyostelium discoideum cDNA clone:ddv3b16, 3' e... 1211 0.0 3
(BJ411225) Dictyostelium discoideum cDNA clone:ddv3b16, 5' e... 963 0.0 2
(BJ412099) Dictyostelium discoideum cDNA clone:ddv6p20, 5' e... 965 0.0 2
(BJ387897) Dictyostelium discoideum cDNA clone:dds5n18, 5' e... 210 8e-50 1
(DA504447) Homo sapiens cDNA clone FCBBF3019643, 5' end, mRN... 46 0.001 3
(EK187279) 1095460006160 Global-Ocean-Sampling_GS-31-01-01-1... 42 0.21 2
(CU694785) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.72 1
(DU883146) 386724 Tomato HindIII BAC Library Solanum lycoper... 42 0.87 2
(AC192293) Pan troglodytes BAC clone CH251-160F14 from chrom... 40 0.91 3
(CU915741) S.lycopersicum DNA sequence from clone LE_HBa-105... 44 0.91 4
(AE002145) Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 34 1.2 5
(CR931727) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 1.2 7
(BX548160) Zebrafish DNA sequence from clone DKEY-25G11 in l... 34 1.2 7
(BZ984693) PUGGI79TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 38 1.5 3
(AC108745) Homo sapiens 3 BAC RP11-232M24 (Roswell Park Canc... 38 1.6 4
(AC161406) Medicago truncatula chromosome 2 BAC clone mth2-8... 40 1.6 4
(EJ194379) 1092344224246 Global-Ocean-Sampling_GS-27-01-01-1... 32 1.7 3
(AC102851) Mus musculus clone RP24-444B2, WORKING DRAFT SEQU... 40 1.7 4
(DC219417) Plasmodium berghei strain ANKA cDNA clone:MZ00103... 36 1.8 2
(DC223056) Plasmodium berghei strain ANKA cDNA clone:MZ00684... 36 1.8 2
(EK353711) 1095468277775 Global-Ocean-Sampling_GS-31-01-01-1... 34 1.9 2
(EJ046439) 1095454119893 Global-Ocean-Sampling_GS-26-01-01-1... 34 1.9 2
(EJ144112) 1092343678152 Global-Ocean-Sampling_GS-27-01-01-1... 34 1.9 2
(BI784888) saf95a07.y3 Gm-c1079 Glycine max cDNA clone GENOM... 36 2.0 2
(AZ522394) 206PbC03 Pb MBN #21 Plasmodium berghei genomic 3'... 36 2.0 2
(AC068448) Homo sapiens chromosome 15, clone RP11-624A21, co... 34 2.0 7
(BV407970) S229P690RA11.T0 GermanShepherd Canis familiaris S... 40 2.0 2
(DC220522) Plasmodium berghei strain ANKA cDNA clone:MZ00275... 36 2.3 2
(DC223672) Plasmodium berghei strain ANKA cDNA clone:MZ00780... 36 2.4 2
(BB970786) Plasmodium berghei str. ANKA cDNA clone: OK000432... 36 2.5 2
(DC222400) Plasmodium berghei strain ANKA cDNA clone:MZ00580... 36 2.5 2
(EJ283777) 1095368005745 Global-Ocean-Sampling_GS-27-01-01-1... 44 2.5 2
(EL699632) CBSU1042.fwd NICHD_XGC_tropLimb_m Xenopus (Silura... 36 2.6 2
(AC159146) Medicago truncatula chromosome 7 BAC clone mth2-7... 46 2.9 1
(GN008115) Sequence 556 from Patent EP2014669. 46 2.9 1
(AP001331) Homo sapiens genomic DNA, chromosome 8q23, clone:... 46 2.9 1
(AC087620) Homo sapiens chromosome 8, clone RP11-35G22, comp... 46 2.9 1
(CU606929) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.9 1
(AC084258) Homo sapiens chromosome 8 clone RP1-29P15 map 8, ... 46 2.9 1
(AC083931) Homo sapiens chromosome 8 clone RP11-80D8 map 8, ... 46 2.9 1
(AC233038) Oryza minuta clone OM__Ba0101H21, *** SEQUENCING ... 46 2.9 1
(AC229928) Oryza minuta clone OM__Ba0138B13, *** SEQUENCING ... 46 2.9 1
(AC225233) Oryza officinalis clone OO__Ba0002C19, *** SEQUEN... 46 2.9 1
(AC214385) Oryza punctata clone OP__Ba0003F16, *** SEQUENCIN... 46 2.9 1
(AC020991) Homo sapiens clone RP11-22P7, WORKING DRAFT SEQUE... 46 2.9 1
(AC018588) Homo sapiens clone RP11-11O5, WORKING DRAFT SEQUE... 46 2.9 1
(AC016997) Homo sapiens chromosome 8 clone RP11-35G22, WORKI... 46 2.9 1
(EI349068) GM_WBc0096I02.f GM_WBc Glycine max genomic clone ... 46 2.9 1
(DE276057) Oryzias latipes DNA, clone: ola1-228B07.F, genomi... 46 2.9 1
(ES393130) MUS11-E08.x1d-t SHGC-MUS Mytilus californianus cD... 46 2.9 1
(ES390059) MUS13-I22.x1d-t SHGC-MUS Mytilus californianus cD... 46 2.9 1
(FG289053) 1108793291971 New World Screwworm Egg 9261 ESTs C... 42 2.9 2
(AM438353) Vitis vinifera contig VV78X082759.10, whole genom... 40 3.0 3
(AC077691) Mus musculus strain C57BL6/J chromosome 12 clone ... 38 3.0 6
(DD141712) NANOMACHINE COMPOSITIONS AND METHODS OF USE. 36 3.4 6
(AC233177) Medicago truncatula chromosome 2 clone mth2-54k10... 40 4.5 3
(AC168603) Strongylocentrotus purpuratus clone R3-3046L7, WO... 38 4.9 6
(AC168757) Strongylocentrotus purpuratus clone R3-3004H24, W... 36 4.9 7
(AC168555) Strongylocentrotus purpuratus clone R3-3091F3, WO... 36 5.3 10
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 32 5.3 10
(AC026297) Homo sapiens chromosome 15 clone RP11-747O24, WOR... 38 5.6 5
(AM466985) Vitis vinifera contig VV78X163583.3, whole genome... 42 5.8 3
(AC157857) Papio anubis clone RP41-109C2, WORKING DRAFT SEQU... 44 6.3 2
(AC006876) Caenorhabditis elegans clone Y54F10y, *** SEQUENC... 42 7.0 4
(BX088652) Zebrafish DNA sequence from clone DKEY-256M19 in ... 44 7.1 3
(CL088825) ISB1-11K2_T7.1 ISB1 Xenopus (Silurana) tropicalis... 32 7.2 2
(CR847930) Zebrafish DNA sequence from clone DKEY-148H19 in ... 40 7.6 3
(BM634176) 17000687508769 A.Gam.ad.cDNA1 Anopheles gambiae c... 40 7.7 2
(AV656280) Homo sapiens cDNA clone:GLCEPF11, 3'end, expresse... 42 8.0 2
(AV656258) Homo sapiens cDNA clone:GLCEPD12, 3'end, expresse... 42 8.1 2
(CR936966) Zebrafish DNA sequence from clone DKEY-118G14 in ... 42 8.3 5
(AC169310) Bos taurus clone CH240-255C6, WORKING DRAFT SEQUE... 34 8.5 6
(AM427612) Vitis vinifera contig VV78X263984.4, whole genome... 38 8.8 5
(FD215230) CBZF12897.g1 CBZF: Normalized blue catfish cDNA l... 42 8.9 2
(DX823020) GH_MBb0025B05f GH_MBb Gossypium hirsutum genomic ... 36 8.9 3
(BX511229) Zebrafish DNA sequence from clone CH211-194H2 in ... 34 9.0 6
(FH008194) CHO_OF403xj19r1.ab1 CHO_OF Nicotiana tabacum geno... 38 9.2 2
(CS605036) Sequence 4022 from Patent WO2007039234. 34 9.4 3
(CS603388) Sequence 2374 from Patent WO2007039234. 34 9.4 3
(AC024813) Caenorhabditis elegans cosmid Y54F10AL, complete ... 42 9.7 3
(BX537287) Zebrafish DNA sequence from clone CH211-206O8 in ... 40 9.8 3
(AM457683) Vitis vinifera contig VV78X133673.15, whole genom... 32 10.0 5

>(BJ430351) Dictyostelium discoideum cDNA clone:ddv6p20, 3' end,
single read.
Length = 707

Score = 1376 bits (694), Expect = 0.0
Identities = 694/694 (100%)
Strand = Plus / Minus


Query: 356 gttaaatcatgggtaactgaattattgggagaatcaatcaactacagcattcacaacgat 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gttaaatcatgggtaactgaattattgggagaatcaatcaactacagcattcacaacgat 648


Query: 416 gcaatcgtagctttatcaagtggaactcaaggtaaactatttggagttgtcattatctgt 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gcaatcgtagctttatcaagtggaactcaaggtaaactatttggagttgtcattatctgt 588


Query: 476 ggcacaggttgcatttcattaggattcaatagggagggtgtctcaggcagatcaggtggt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ggcacaggttgcatttcattaggattcaatagggagggtgtctcaggcagatcaggtggt 528


Query: 536 tggggaccattattaggcgactatggcagtggctaccaaattggttacgatatcctcaga 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tggggaccattattaggcgactatggcagtggctaccaaattggttacgatatcctcaga 468


Query: 596 catgttttaaaagcaaaagatcaagttggtccaaaaacttcactaactcaagttttatta 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 catgttttaaaagcaaaagatcaagttggtccaaaaacttcactaactcaagttttatta 408


Query: 656 gaaaaattacaactcaccaaagaagaagatttaatctcatgggcttatgatccaaaaact 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gaaaaattacaactcaccaaagaagaagatttaatctcatgggcttatgatccaaaaact 348


Query: 716 caaagttggcaaaagtttgctcaattatcacctttagcttttgagcaagcccaattaggt 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 caaagttggcaaaagtttgctcaattatcacctttagcttttgagcaagcccaattaggt 288


Query: 776 gatgaaatttcaaatttaattttagttgatgctgcaaatgcactttatgatttaattaat 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gatgaaatttcaaatttaattttagttgatgctgcaaatgcactttatgatttaattaat 228


Query: 836 agtgttattaaaaagttgggattggataaagaagagaaattcccattggtttatactgga 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 agtgttattaaaaagttgggattggataaagaagagaaattcccattggtttatactgga 168


Query: 896 ggaaatattgagagaaaaggtattctttctgatcttttatccaagaaaattatggaaaat 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ggaaatattgagagaaaaggtattctttctgatcttttatccaagaaaattatggaaaat 108


Query: 956 tatccaaatgctgaaattttaaatactacttgtgatccttcaatgggtgctgctttattg 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tatccaaatgctgaaattttaaatactacttgtgatccttcaatgggtgctgctttattg 48


Query: 1016 gcattaaactctaagaaataaacttatttttatc 1049
||||||||||||||||||||||||||||||||||
Sbjct: 47 gcattaaactctaagaaataaacttatttttatc 14

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,405,016,177
Number of extensions: 86741750
Number of successful extensions: 7331660
Number of sequences better than 10.0: 85
Length of query: 1097
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1073
Effective length of database: 99,340,224,878
Effective search space: 106592061294094
Effective search space used: 106592061294094
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.28
Homology vs Protein
Query= Contig-U03440-1 (Contig-U03440-1Q) /CSM_Contig/Contig-U03440-1Q.Seq.d
(1097 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54PM7) RecName: Full=N-acetyl-D-glucosamine kinase; S... 639 0.0
AK227991_1(AK227991|pid:none) Arabidopsis thaliana mRNA for hypo... 216 9e-55
AC009917_16(AC009917|pid:none) Arabidopsis thaliana chromosome 1... 212 2e-53
EU964915_1(EU964915|pid:none) Zea mays clone 282525 ATPase mRNA,... 200 6e-50
AK319058_1(AK319058|pid:none) Arabidopsis thaliana AT1G30540 mRN... 198 2e-49
AK101816_1(AK101816|pid:none) Oryza sativa Japonica Group cDNA c... 197 4e-49
EU973919_1(EU973919|pid:none) Zea mays clone 424247 ATPase mRNA,... 196 9e-49
AP006716_193(AP006716|pid:none) Staphylococcus haemolyticus JCSC... 157 6e-37
AE001437_178(AE001437|pid:none) Clostridium acetobutylicum ATCC ... 151 3e-35
CP001037_4237(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 147 5e-34
AG2387(AG2387) hypothetical protein alr4655 [imported] - Nostoc ... 145 3e-33
CP000724_4029(CP000724|pid:none) Alkaliphilus metalliredigens QY... 144 4e-33
AE008691_200(AE008691|pid:none) Thermoanaerobacter tengcongensis... 138 4e-31
CP000393_2178(CP000393|pid:none) Trichodesmium erythraeum IMS101... 135 2e-30
AP008955_1344(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 131 4e-29
CP000820_6548(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 131 4e-29
CT573072_723(CT573072|pid:none) Kuenenia stuttgartiensis genome ... 131 5e-29
CP000927_318(CP000927|pid:none) Caulobacter sp. K31, complete ge... 130 6e-29
CP000246_2102(CP000246|pid:none) Clostridium perfringens ATCC 13... 130 1e-28
CP000312_1824(CP000312|pid:none) Clostridium perfringens SM101, ... 129 1e-28
AP006840_292(AP006840|pid:none) Symbiobacterium thermophilum IAM... 128 4e-28
CP000382_1821(CP000382|pid:none) Clostridium novyi NT, complete ... 126 1e-27
CP000817_3718(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 125 3e-27
CP000817_737(CP000817|pid:none) Lysinibacillus sphaericus C3-41,... 122 2e-26
CP000386_614(CP000386|pid:none) Rubrobacter xylanophilus DSM 994... 120 7e-26
CP000682_1371(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 120 7e-26
CP001146_107(CP001146|pid:none) Dictyoglomus thermophilum H-6-12... 120 9e-26
AM747722_462(AM747722|pid:none) Burkholderia cenocepacia J2315 c... 119 2e-25
AM180355_3124(AM180355|pid:none) Clostridium difficile 630 compl... 118 4e-25
CP000885_1113(CP000885|pid:none) Clostridium phytofermentans ISD... 117 9e-25
CP001056_1430(CP001056|pid:none) Clostridium botulinum B str. Ek... 117 9e-25
CP001251_334(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 117 9e-25
AP009153_2004(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 116 2e-24
AL939125_100(AL939125|pid:none) Streptomyces coelicolor A3(2) co... 114 8e-24
CP001399_2136(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 113 1e-23
CP001251_1607(CP001251|pid:none) Dictyoglomus turgidum DSM 6724,... 113 1e-23
AE006641_2967(AE006641|pid:none) Sulfolobus solfataricus P2, com... 110 1e-22
CP001078_1345(CP001078|pid:none) Clostridium botulinum E3 str. A... 110 1e-22
CP001276_712(CP001276|pid:none) Thermomicrobium roseum DSM 5159 ... 109 2e-22
AM412317_3360(AM412317|pid:none) Clostridium botulinum A str. AT... 108 3e-22
CP000728_3335(CP000728|pid:none) Clostridium botulinum F str. La... 107 6e-22
CP001581_3570(CP001581|pid:none) Clostridium botulinum A2 str. K... 107 7e-22
CP001146_1496(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 105 3e-21
CP000764_1714(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 105 4e-21
CP000910_3364(CP000910|pid:none) Renibacterium salmoninarum ATCC... 104 6e-21
CP000474_2700(CP000474|pid:none) Arthrobacter aurescens TC1, com... 102 2e-20
CU458896_360(CU458896|pid:none) Mycobacterium abscessus chromoso... 102 2e-20
CP001398_382(CP001398|pid:none) Thermococcus gammatolerans EJ3, ... 101 4e-20
CP000159_361(CP000159|pid:none) Salinibacter ruber DSM 13855, co... 101 4e-20
CP000227_2283(CP000227|pid:none) Bacillus cereus Q1, complete ge... 100 7e-20
CP001186_2259(CP001186|pid:none) Bacillus cereus G9842, complete... 100 1e-19
AE016877_2250(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 100 1e-19
AE017194_2480(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 100 2e-19
CP000474_1965(CP000474|pid:none) Arthrobacter aurescens TC1, com... 99 3e-19
CP001215_2047(CP001215|pid:none) Bacillus anthracis str. CDC 684... 98 5e-19
AE016879_2270(AE016879|pid:none) Bacillus anthracis str. Ames, c... 98 5e-19
CP001472_1281(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 97 8e-19
CP000686_3851(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 97 1e-18
AE017355_2223(AE017355|pid:none) Bacillus thuringiensis serovar ... 97 1e-18
CP000360_3349(CP000360|pid:none) Acidobacteria bacterium Ellin34... 96 2e-18
CP001283_2393(CP001283|pid:none) Bacillus cereus AH820, complete... 96 2e-18
CP000812_1527(CP000812|pid:none) Thermotoga lettingae TMO, compl... 96 2e-18
CP000001_2187(CP000001|pid:none) Bacillus cereus E33L, complete ... 95 4e-18
CP001634_674(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, co... 95 4e-18
AP006840_2749(AP006840|pid:none) Symbiobacterium thermophilum IA... 92 4e-17
CP000852_812(CP000852|pid:none) Caldivirga maquilingensis IC-167... 91 7e-17
BC167978_1(BC167978|pid:none) Xenopus laevis cDNA clone MGC:1800... 89 2e-16
CP001622_2855(CP001622|pid:none) Rhizobium leguminosarum bv. tri... 88 6e-16
BT080029_1(BT080029|pid:none) Esox lucius clone eluc-evq-531-221... 88 6e-16
CP000282_3028(CP000282|pid:none) Saccharophagus degradans 2-40, ... 87 8e-16
CP000133_2860(CP000133|pid:none) Rhizobium etli CFN 42, complete... 87 1e-15
CP000910_1117(CP000910|pid:none) Renibacterium salmoninarum ATCC... 86 2e-15
CP000975_1689(CP000975|pid:none) Methylacidiphilum infernorum V4... 85 4e-15
BT076984_1(BT076984|pid:none) Caligus rogercresseyi clone crog-e... 85 4e-15
AM236080_3360(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 85 5e-15
CP000759_788(CP000759|pid:none) Ochrobactrum anthropi ATCC 49188... 84 9e-15
CT978603_2218(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 82 3e-14
CP001191_2615(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 80 1e-13
BC005371_1(BC005371|pid:none) Homo sapiens N-acetylglucosamine k... 80 1e-13
BA000012_3670(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 80 1e-13
CP000480_184(CP000480|pid:none) Mycobacterium smegmatis str. MC2... 80 1e-13
CP000446_2924(CP000446|pid:none) Shewanella sp. MR-4, complete g... 80 2e-13
CP000554_2416(CP000554|pid:none) Prochlorococcus marinus str. MI... 79 2e-13
BX548175_2362(BX548175|pid:none) Prochlorococcus marinus MIT9313... 79 2e-13
CP001614_721(CP001614|pid:none) Teredinibacter turnerae T7901, c... 79 2e-13
CP000088_2315(CP000088|pid:none) Thermobifida fusca YX, complete... 79 4e-13
AK222645_1(AK222645|pid:none) Homo sapiens mRNA for N-Acetylgluc... 79 4e-13
AY335625_1(AY335625|pid:none) Synthetic construct Homo sapiens N... 78 5e-13
AK001812_1(AK001812|pid:none) Homo sapiens cDNA FLJ10950 fis, cl... 78 5e-13
AL939132_55(AL939132|pid:none) Streptomyces coelicolor A3(2) com... 78 5e-13
AE014297_2086(AE014297|pid:none) Drosophila melanogaster chromos... 78 6e-13
(Q9QZ08) RecName: Full=N-acetyl-D-glucosamine kinase; S... 78 6e-13
(Q3SZM9) RecName: Full=N-acetyl-D-glucosamine kinase; S... 77 1e-12
CP000097_2049(CP000097|pid:none) Synechococcus sp. CC9902, compl... 77 1e-12
CP000493_1526(CP000493|pid:none) Hyperthermus butylicus DSM 5456... 77 1e-12
BA000030_5386(BA000030|pid:none) Streptomyces avermitilis MA-468... 77 1e-12
AE014299_3411(AE014299|pid:none) Shewanella oneidensis MR-1, com... 77 1e-12
CS185546_1(CS185546|pid:none) Sequence 29 from Patent EP1591448. 76 2e-12
CP000444_2995(CP000444|pid:none) Shewanella sp. MR-7, complete g... 76 2e-12
CP001192_374(CP001192|pid:none) Rhizobium leguminosarum bv. trif... 75 3e-12
BX569689_283(BX569689|pid:none) Synechococcus sp. WH8102 complet... 75 3e-12
CP000155_6681(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 75 3e-12
AJ242910_1(AJ242910|pid:none) Homo sapiens mRNA for N-Acetylgluc... 75 3e-12
CP001032_835(CP001032|pid:none) Opitutus terrae PB90-1, complete... 75 5e-12
CP000503_3051(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 75 5e-12
CP000413_1709(CP000413|pid:none) Lactobacillus gasseri ATCC 3332... 74 7e-12
AM420293_488(AM420293|pid:none) Saccharopolyspora erythraea NRRL... 74 7e-12
CP000435_321(CP000435|pid:none) Synechococcus sp. CC9311, comple... 74 7e-12
CP000472_3539(CP000472|pid:none) Shewanella piezotolerans WP3, c... 74 7e-12
CP000738_3368(CP000738|pid:none) Sinorhizobium medicae WSM419, c... 74 9e-12
AE014292_495(AE014292|pid:none) Brucella suis 1330 chromosome II... 74 9e-12
AC3604(AC3604) n-acetylglucosamine kinase (EC 2.7.1.59) [importe... 74 1e-11
CP001618_367(CP001618|pid:none) Beutenbergia cavernae DSM 12333,... 73 2e-11
CP000474_1149(CP000474|pid:none) Arthrobacter aurescens TC1, com... 73 2e-11
CP001389_3451(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 73 2e-11
CP000606_1114(CP000606|pid:none) Shewanella loihica PV-4, comple... 73 2e-11
CP001623_692(CP001623|pid:none) Rhizobium leguminosarum bv. trif... 73 2e-11
AP009493_4869(AP009493|pid:none) Streptomyces griseus subsp. gri... 72 3e-11
CP000151_167(CP000151|pid:none) Burkholderia sp. 383 chromosome ... 72 3e-11
CP000378_2842(CP000378|pid:none) Burkholderia cenocepacia AU 105... 72 3e-11
CP000958_227(CP000958|pid:none) Burkholderia cenocepacia MC0-3 c... 72 3e-11
CP000388_123(CP000388|pid:none) Pseudoalteromonas atlantica T6c,... 72 5e-11
CP000753_1123(CP000753|pid:none) Shewanella baltica OS185, compl... 72 5e-11
AM920427_1320(AM920427|pid:none) Penicillium chrysogenum Wiscons... 71 6e-11
CP000891_1172(CP000891|pid:none) Shewanella baltica OS195, compl... 71 6e-11
CP001052_3762(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 71 6e-11
CP000563_1069(CP000563|pid:none) Shewanella baltica OS155, compl... 71 8e-11
AK007240_1(AK007240|pid:none) Mus musculus adult male testis cDN... 71 8e-11
CP000086_3126(CP000086|pid:none) Burkholderia thailandensis E264... 70 1e-10
CR378664_155(CR378664|pid:none) Photobacterium profundum SS9; se... 70 1e-10
CP000851_1099(CP000851|pid:none) Shewanella pealeana ATCC 700345... 70 1e-10
AM747720_122(AM747720|pid:none) Burkholderia cenocepacia J2315 c... 70 1e-10
DQ463745_2(DQ463745|pid:none) Proteobacterium AI21 GlcNAc-6P dea... 70 2e-10
BC151923_1(BC151923|pid:none) Danio rerio zgc:171682, mRNA (cDNA... 69 2e-10
CP000749_1636(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 69 2e-10
BX571965_3346(BX571965|pid:none) Burkholderia pseudomallei strai... 69 2e-10
CP000852_1636(CP000852|pid:none) Caldivirga maquilingensis IC-16... 69 2e-10
AL591688_200(AL591688|pid:none) Sinorhizobium meliloti 1021 comp... 69 3e-10
CP000821_1210(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 69 3e-10
CP001025_170(CP001025|pid:none) Burkholderia ambifaria MC40-6 ch... 69 3e-10
CP000812_1515(CP000812|pid:none) Thermotoga lettingae TMO, compl... 69 4e-10
CP000358_485(CP000358|pid:none) Deinococcus geothermalis DSM 113... 69 4e-10
CP000910_3464(CP000910|pid:none) Renibacterium salmoninarum ATCC... 69 4e-10
CP000507_297(CP000507|pid:none) Shewanella amazonensis SB2B, com... 68 5e-10
CP000033_1420(CP000033|pid:none) Lactobacillus acidophilus NCFM,... 68 5e-10
CP001634_1937(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, c... 68 7e-10
BA000012_5715(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 67 9e-10
CP000934_1132(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 67 1e-09
T34482(T34482) hypothetical protein W06B4.2 - Caenorhabditis ele... 67 1e-09
CP000614_192(CP000614|pid:none) Burkholderia vietnamiensis G4 ch... 67 1e-09
CP000570_3805(CP000570|pid:none) Burkholderia pseudomallei 668 c... 67 1e-09
CP000759_369(CP000759|pid:none) Ochrobactrum anthropi ATCC 49188... 67 1e-09
AE017283_1127(AE017283|pid:none) Propionibacterium acnes KPA1712... 66 2e-09
CP000270_4286(CP000270|pid:none) Burkholderia xenovorans LB400 c... 65 3e-09
AE017261_11(AE017261|pid:none) Picrophilus torridus DSM 9790, co... 65 4e-09
BA000031_2485(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 65 4e-09
CP000629_1502(CP000629|pid:none) Agrobacterium radiobacter K84 c... 64 7e-09
CP000390_2677(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 64 9e-09
CP001102_906(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 63 2e-08
CP000789_3313(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 63 2e-08
CP000961_1303(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 63 2e-08
FM954972_2387(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 63 2e-08
AL939113_137(AL939113|pid:none) Streptomyces coelicolor A3(2) co... 63 2e-08
CP000302_2688(CP000302|pid:none) Shewanella denitrificans OS217,... 62 3e-08
AE017261_1094(AE017261|pid:none) Picrophilus torridus DSM 9790, ... 62 4e-08
CP000020_2173(CP000020|pid:none) Vibrio fischeri ES114 chromosom... 62 4e-08
CP001139_2172(CP001139|pid:none) Vibrio fischeri MJ11 chromosome... 62 5e-08
CP000507_939(CP000507|pid:none) Shewanella amazonensis SB2B, com... 61 6e-08
AE017224_977(AE017224|pid:none) Brucella abortus biovar 1 str. 9... 61 8e-08
CP000888_955(CP000888|pid:none) Brucella abortus S19 chromosome ... 61 8e-08
FN357726_15(FN357726|pid:none) Schistosoma mansoni genome sequen... 60 1e-07
CP000264_1358(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 60 2e-07
CP000873_1066(CP000873|pid:none) Brucella canis ATCC 23365 chrom... 59 3e-07
CP001654_701(CP001654|pid:none) Dickeya dadantii Ech703, complet... 58 5e-07
AL445063_120(AL445063|pid:none) Thermoplasma acidophilum complet... 58 5e-07
CP000481_1850(CP000481|pid:none) Acidothermus cellulolyticus 11B... 58 7e-07
CP000376_120(CP000376|pid:none) Silicibacter sp. TM1040 mega pla... 57 2e-06
AE016825_2896(AE016825|pid:none) Chromobacterium violaceum ATCC ... 56 2e-06
AE003852_602(AE003852|pid:none) Vibrio cholerae O1 biovar eltor ... 56 3e-06
CP000627_134(CP000627|pid:none) Vibrio cholerae O395 chromosome ... 56 3e-06
CP001013_4192(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 56 3e-06
CP000644_2883(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 56 3e-06
CR857520_1(CR857520|pid:none) Pongo abelii mRNA; cDNA DKFZp459B0... 55 3e-06
CP000489_2444(CP000489|pid:none) Paracoccus denitrificans PD1222... 55 4e-06
AP007162_334(AP007162|pid:none) Aspergillus oryzae RIB40 genomic... 54 1e-05
BA000037_2740(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 54 1e-05
CP001116_29(CP001116|pid:none) Deinococcus deserti VCD115 plasmi... 54 1e-05
AE016795_1539(AE016795|pid:none) Vibrio vulnificus CMCP6 chromos... 54 1e-05
CP001400_1139(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 53 2e-05
AB355991_3(AB355991|pid:none) Aeromonas hydrophila strain SUWA-9... 53 2e-05
CP001401_1180(CP001401|pid:none) Sulfolobus islandicus M.16.27, ... 52 4e-05
CP000110_272(CP000110|pid:none) Synechococcus sp. CC9605, comple... 52 5e-05
FM178379_2581(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ... 50 1e-04
CP000472_1569(CP000472|pid:none) Shewanella piezotolerans WP3, c... 50 2e-04
AP009493_6500(AP009493|pid:none) Streptomyces griseus subsp. gri... 49 4e-04
CP001655_3037(CP001655|pid:none) Dickeya zeae Ech1591, complete ... 48 5e-04
CP000821_2931(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 48 7e-04
A90246(A90246) hypothetical protein SSO0950 [imported] - Sulfolo... 47 0.002
CP000143_19(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 chr... 45 0.003
AE008692_1169(AE008692|pid:none) Zymomonas mobilis subsp. mobili... 45 0.006
AM238663_1103(AM238663|pid:none) Streptomyces ambofaciens ATCC 2... 44 0.010
CP000436_1261(CP000436|pid:none) Haemophilus somnus 129PT, compl... 44 0.010
CP000478_485(CP000478|pid:none) Syntrophobacter fumaroxidans MPO... 44 0.013
CP000577_95(CP000577|pid:none) Rhodobacter sphaeroides ATCC 1702... 44 0.013
CP000606_1422(CP000606|pid:none) Shewanella loihica PV-4, comple... 43 0.017
CP000031_1805(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 43 0.017
AE004439_1375(AE004439|pid:none) Pasteurella multocida subsp. mu... 43 0.023
CP000961_3791(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 42 0.029
CP000034_320(CP000034|pid:none) Shigella dysenteriae Sd197, comp... 42 0.039
CP000880_2438(CP000880|pid:none) Salmonella enterica subsp. ariz... 42 0.039
CP000964_4264(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 42 0.039
AE017220_434(AE017220|pid:none) Salmonella enterica subsp. enter... 42 0.039
CP000826_1030(CP000826|pid:none) Serratia proteamaculans 568, co... 42 0.039
AP006725_1064(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 42 0.050
AL939107_259(AL939107|pid:none) Streptomyces coelicolor A3(2) co... 42 0.050
CP000360_282(CP000360|pid:none) Acidobacteria bacterium Ellin345... 41 0.066
AY809433_1(AY809433|pid:none) Schistosoma japonicum SJCHGC07453 ... 41 0.066
AE006468_383(AE006468|pid:none) Salmonella enterica subsp. enter... 41 0.066
AE005674_331(AE005674|pid:none) Shigella flexneri 2a str. 301, c... 41 0.086
CP000653_858(CP000653|pid:none) Enterobacter sp. 638, complete g... 41 0.086
CP001138_395(CP001138|pid:none) Salmonella enterica subsp. enter... 41 0.086
AE014073_320(AE014073|pid:none) Shigella flexneri 2a str. 2457T,... 41 0.086
CP000613_815(CP000613|pid:none) Rhodospirillum centenum SW, comp... 41 0.086
CP000647_328(CP000647|pid:none) Klebsiella pneumoniae subsp. pne... 40 0.15
CP000924_569(CP000924|pid:none) Thermoanaerobacter pseudethanoli... 40 0.15
CP001393_512(CP001393|pid:none) Anaerocellum thermophilum DSM 67... 40 0.19
CP000961_1142(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 40 0.19
CP000822_2704(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 40 0.19
AP009153_1220(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 40 0.19
CP000927_2120(CP000927|pid:none) Caulobacter sp. K31, complete g... 40 0.19
CU459003_3735(CU459003|pid:none) Magnetospirillum gryphiswaldens... 40 0.19
CU928158_2534(CU928158|pid:none) Escherichia fergusonii ATCC 354... 39 0.25
CP000970_410(CP000970|pid:none) Escherichia coli SMS-3-5, comple... 39 0.25
CP000946_3172(CP000946|pid:none) Escherichia coli ATCC 8739, com... 39 0.25
CU928160_375(CU928160|pid:none) Escherichia coli IAI1 chromosome... 39 0.25
(P23917) RecName: Full=Fructokinase; EC=2.7.1.4; AltNam... 39 0.25
CP000247_447(CP000247|pid:none) Escherichia coli 536, complete g... 39 0.25
AE014299_1624(AE014299|pid:none) Shewanella oneidensis MR-1, com... 39 0.25
CP000112_92(CP000112|pid:none) Desulfovibrio desulfuricans G20, ... 39 0.33
BX950851_1093(BX950851|pid:none) Erwinia carotovora subsp. atros... 39 0.33
CU928145_388(CU928145|pid:none) Escherichia coli 55989 chromosom... 39 0.33
CP001616_46(CP001616|pid:none) Tolumonas auensis DSM 9187, compl... 39 0.43
CP000038_350(CP000038|pid:none) Shigella sonnei Ss046, complete ... 39 0.43
CP000394_217(CP000394|pid:none) Granulibacter bethesdensis CGDNI... 38 0.56
CP000302_2585(CP000302|pid:none) Shewanella denitrificans OS217,... 38 0.56
CP000447_1311(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 38 0.56
CP000891_1497(CP000891|pid:none) Shewanella baltica OS195, compl... 38 0.56
CP000753_1447(CP000753|pid:none) Shewanella baltica OS185, compl... 38 0.56
BA000016_81(BA000016|pid:none) Clostridium perfringens str. 13 D... 38 0.73
AE010300_1436(AE010300|pid:none) Leptospira interrogans serovar ... 38 0.73
CP000851_1437(CP000851|pid:none) Shewanella pealeana ATCC 700345... 38 0.73
CP000923_1036(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 37 0.95
CP000563_1456(CP000563|pid:none) Shewanella baltica OS155, compl... 37 0.95
AE008691_1823(AE008691|pid:none) Thermoanaerobacter tengcongensi... 37 0.95
EU016573_13(EU016573|pid:none) Uncultured marine microorganism H... 37 0.95
AE015928_3616(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 37 0.95
CP000927_150(CP000927|pid:none) Caulobacter sp. K31, complete ge... 37 0.95
AE005176_759(AE005176|pid:none) Lactococcus lactis subsp. lactis... 37 1.2
CP000444_2662(CP000444|pid:none) Shewanella sp. MR-7, complete g... 37 1.2
CP000934_1239(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 37 1.2
AB0390(AB0390) conserved hypothetical protein YPO3211 [imported]... 37 1.6
AP006841_938(AP006841|pid:none) Bacteroides fragilis YCH46 DNA, ... 37 1.6
BX936398_914(BX936398|pid:none) Yersinia pseudotuberculosis IP32... 37 1.6
CP001357_1003(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 36 2.1
BC044116_1(BC044116|pid:none) Xenopus laevis keratin 8, mRNA (cD... 36 2.1
CP001100_773(CP001100|pid:none) Chloroherpeton thalassium ATCC 3... 36 2.1
CP000555_2076(CP000555|pid:none) Methylibium petroleiphilum PM1,... 36 2.8
AE014299_3014(AE014299|pid:none) Shewanella oneidensis MR-1, com... 36 2.8
(Q2T9I5) RecName: Full=RNA-binding protein 26; AltName: Full=RNA... 36 2.8
CP000139_2512(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 36 2.8
CP000383_778(CP000383|pid:none) Cytophaga hutchinsonii ATCC 3340... 36 2.8
BC125790_1(BC125790|pid:none) Xenopus tropicalis hypothetical pr... 35 3.6
CP000644_431(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 35 3.6
CU207366_2103(CU207366|pid:none) Gramella forsetii KT0803 comple... 35 3.6
CP000721_4811(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 35 3.6
AE014075_4387(AE014075|pid:none) Escherichia coli CFT073, comple... 35 4.7
AK127803_1(AK127803|pid:none) Homo sapiens cDNA FLJ45904 fis, cl... 35 4.7
CP001146_951(CP001146|pid:none) Dictyoglomus thermophilum H-6-12... 35 4.7
CR749850_1(CR749850|pid:none) Homo sapiens mRNA; cDNA DKFZp686B2... 35 4.7
(Q96JM2) RecName: Full=Zinc finger protein 462; &BC172445_1(BC1... 35 4.7
CU928164_4146(CU928164|pid:none) Escherichia coli IAI39 chromoso... 35 4.7
CP001339_2616(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ... 35 4.7
CU651637_3538(CU651637|pid:none) Escherichia coli LF82 chromosom... 35 4.7
CP000243_4120(CP000243|pid:none) Escherichia coli UTI89, complet... 35 4.7
BX648965_1(BX648965|pid:none) Homo sapiens mRNA; cDNA DKFZp686L2... 35 4.7
CP000931_1514(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 35 4.7
CP001251_1054(CP001251|pid:none) Dictyoglomus turgidum DSM 6724,... 35 6.1
AJ938182_2377(AJ938182|pid:none) Staphylococcus aureus RF122 com... 35 6.1
GN110490_1(GN110490|pid:none) Sequence 15271 from Patent WO20090... 35 6.1
AP009324_2491(AP009324|pid:none) Staphylococcus aureus subsp. au... 35 6.1
GN110578_1(GN110578|pid:none) Sequence 15359 from Patent WO20090... 35 6.1
CP000096_2077(CP000096|pid:none) Pelodictyon luteolum DSM 273, c... 35 6.1
AF071081_1(AF071081|pid:none) Mycobacterium tuberculosis proline... 35 6.1
FM864216_427(FM864216|pid:none) Mycoplasma conjunctivae HRC/581T... 35 6.1
AE015928_4652(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 35 6.1
GN110586_1(GN110586|pid:none) Sequence 15367 from Patent WO20090... 35 6.1
(Q8VE11) RecName: Full=Myotubularin-related protein 6; ... 35 6.1
BX571856_2535(BX571856|pid:none) Staphylococcus aureus subsp. au... 35 6.1
CP000965_113(CP000965|pid:none) Klebsiella pneumoniae 342 plasmi... 34 8.0
CP000721_3452(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 34 8.0
CP000739_141(CP000739|pid:none) Sinorhizobium medicae WSM419 pla... 34 8.0

>(Q54PM7) RecName: Full=N-acetyl-D-glucosamine kinase;
Short=N-acetylglucosamine kinase; EC=2.7.1.59;
AltName: Full=GlcNAc kinase;
Length = 323

Score = 639 bits (1647), Expect = 0.0
Identities = 322/322 (100%), Positives = 322/322 (100%)
Frame = +2

Query: 68 RVTMSKEIFIGIDGGGTKTSTVAVDSNGQELARHTSPCSNYHSVGEDLAKAAINEGIKYV 247
RVTMSKEIFIGIDGGGTKTSTVAVDSNGQELARHTSPCSNYHSVGEDLAKAAINEGIKYV
Sbjct: 2 RVTMSKEIFIGIDGGGTKTSTVAVDSNGQELARHTSPCSNYHSVGEDLAKAAINEGIKYV 61

Query: 248 IRKVKETITDDDNKEVTVGSICLGMSGVDREKDKLLVKSWVTELLGESINYSIHNDAIVA 427
IRKVKETITDDDNKEVTVGSICLGMSGVDREKDKLLVKSWVTELLGESINYSIHNDAIVA
Sbjct: 62 IRKVKETITDDDNKEVTVGSICLGMSGVDREKDKLLVKSWVTELLGESINYSIHNDAIVA 121

Query: 428 LSSGTQGKLFGVVIICGTGCISLGFNREGVSGRSGGWGPLLGDYGSGYQIGYDILRHVLK 607
LSSGTQGKLFGVVIICGTGCISLGFNREGVSGRSGGWGPLLGDYGSGYQIGYDILRHVLK
Sbjct: 122 LSSGTQGKLFGVVIICGTGCISLGFNREGVSGRSGGWGPLLGDYGSGYQIGYDILRHVLK 181

Query: 608 AKDQVGPKTSLTQVLLEKLQLTKEEDLISWAYDPKTQSWQKFAQLSPLAFEQAQLGDEIS 787
AKDQVGPKTSLTQVLLEKLQLTKEEDLISWAYDPKTQSWQKFAQLSPLAFEQAQLGDEIS
Sbjct: 182 AKDQVGPKTSLTQVLLEKLQLTKEEDLISWAYDPKTQSWQKFAQLSPLAFEQAQLGDEIS 241

Query: 788 NLILVDAANALYDLINSVIKKLGLDKEEKFPLVYTGGNIERKGILSDLLSKKIMENYPNA 967
NLILVDAANALYDLINSVIKKLGLDKEEKFPLVYTGGNIERKGILSDLLSKKIMENYPNA
Sbjct: 242 NLILVDAANALYDLINSVIKKLGLDKEEKFPLVYTGGNIERKGILSDLLSKKIMENYPNA 301

Query: 968 EILNTTCDPSMGAALLALNSKK 1033
EILNTTCDPSMGAALLALNSKK
Sbjct: 302 EILNTTCDPSMGAALLALNSKK 323

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,782,083,937
Number of extensions: 36618755
Number of successful extensions: 117395
Number of sequences better than 10.0: 301
Number of HSP's gapped: 115875
Number of HSP's successfully gapped: 301
Length of query: 365
Length of database: 1,061,185,681
Length adjustment: 130
Effective length of query: 235
Effective length of database: 636,287,441
Effective search space: 149527548635
Effective search space used: 149527548635
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.83 gvh: 0.35 alm: 0.26 top: 0.57 tms: 0.07 mit: 0.27 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.60 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.10 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 1.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

28.0 %: cytoplasmic
28.0 %: nuclear
20.0 %: mitochondrial
8.0 %: plasma membrane
8.0 %: endoplasmic reticulum
4.0 %: vesicles of secretory system
4.0 %: peroxisomal

>> prediction for Contig-U03440-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 2
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0