>Contig-U00751-1 (Contig-U00751-1Q) /CSM_Contig/Contig-U00751-1Q.Seq.d
AAGGTTAAAAGGNAAAAAAAAAGTGGGAAAAAANCCTTTAAAAAAAAAAN
AANNCCCCCNAAAANGGGGGNTTCNAAAAANGNGGNTTCNAAAAANGNGG
NTTCNAAAAANGNGGNTTCNAAAAANGNGGNAATTTTNAAAAAGTTNAAA
ANGNANNAATTTATTTNTTNAAAAAAAAACNAAAAAAAAAACTAAAAAAA
AAAAACTAAAAATATC

est1=CFC504Z,1,217

RLKGKKKVGKXPLKKKXXPXKXGXXKXXXXKXXXXKXXXXKXXXFXKSXKXXNLFXXKKT
KKKTKKKKLKI

Frame A:
kvkrxkksgkkxfkkkxxppkxgxskxxxskxxxskxxxskxxxixkkxkxxxfixxkkn
xkkn*kkktkni


Frame B:
RLKGKKKVGKXPLKKKXXPXKXGXXKXXXXKXXXXKXXXXKXXXFXKSXKXXNLFXXKKT
KKKTKKKKLKI


Frame C:
g*kxkkkwekxl*kkxxxpxxggfxkxgfxkxgfxkxgfxkxgnfxkvxxxxiyxxkkkx
kkklkkkn*ky

Query= Contig-U00751-1 (Contig-U00751-1Q)
/CSM_Contig/Contig-U00751-1Q.Seq.d
         (216 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


 ***** No hits found ******

  Database: CSM
    Posted date:  Jun 21, 2004 12:56 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 0
Number of Sequences: 8402
Number of extensions: 0
Number of successful extensions: 0
Number of sequences better than 10.0: 0
length of query: 216
length of database: 8,075,542
effective HSP length: 15
effective length of query: 201
effective length of database: 7,949,512
effective search space: 1597851912
effective search space used: 1597851912
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)

Query= Contig-U00751-1 (Contig-U00751-1Q) /CSM_Contig/Contig-U00751-1Q.Seq.d
         (216 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

 ***** No hits found ******

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 0
Number of sequences better than 10.0: 0
Length of query: 216
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 193
Effective length of database: 99,442,330,388
Effective search space: 19192369764884
Effective search space used: 19192369764884
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

Query= Contig-U00751-1 (Contig-U00751-1Q) /CSM_Contig/Contig-U00751-1Q.Seq.d
         (216 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

 ***** No hits found ******

Lambda     K      H
   0.304    0.125    0.326

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 52,296,292
Number of extensions: 3610103
Number of successful extensions: 99
Number of sequences better than 10.0: 0
Number of HSP's gapped: 96
Number of HSP's successfully gapped: 0
Length of query: 72
Length of database: 1,051,180,864
Length adjustment: 43
Effective length of query: 29
Effective length of database: 912,008,827
Effective search space: 26448255983
Effective search space used: 26448255983
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 27 (15.0 bits)

 psg: 0.51  gvh: 0.32  alm: 0.70  top: 0.53  tms: 0.00  mit: 0.39  mip: 0.00
 nuc: 0.34  erl: 0.00  erm: 0.60  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 68.0 %: nuclear
	 20.0 %: cytoplasmic
	 12.0 %: mitochondrial

>> prediction for Contig-U00751-1 is nuc