Contig-U03376-1
Contig ID Contig-U03376-1
Contig update 2002. 9.13
Contig sequence
>Contig-U03376-1 (Contig-U03376-1Q) /CSM_Contig/Contig-U03376-1Q.Seq.d
ACTGAATTAGCTGACCAAGATAAAACAAATTTAAAATGTGATAAAAAATT
AGTAGTTTCACTTTACATAGATTCACAAAAAGAAAATTCAGAAACATTTA
ATTTTCAAGTTAGTGAAATTAAAGATGAAAATGGTAAATTAAAAACATTA
GTTATACCAATTTCAGTAAAATTTAAAAAATCAGAAACATTTATAAATTA
TCCATTAGTTTATG

Gap no gap
Contig length 214
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 6424590
End point 6424376
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 1
Link to clone list U03376
List of clone(s)

est1=FC-IC0522E,1,215
Translated Amino Acid sequence
TELADQDKTNLKCDKKLVVSLYIDSQKENSETFNFQVSEIKDENGKLKTLVIPISVKFKK
SETFINYPLVY


Translated Amino Acid sequence (All Frames)
Frame A:
TELADQDKTNLKCDKKLVVSLYIDSQKENSETFNFQVSEIKDENGKLKTLVIPISVKFKK
SETFINYPLVY


Frame B:
ln*ltkikqi*nvikn**fhft*ihkkkiqkhlifklvklkmkmvn*kh*lyqfq*nlkn
qkhl*iih*fm


Frame C:
*is*pr*nkfkm**kissftlhrftkrkfrni*fss**n*r*kw*iknisytnfski*ki
rniyklsisl


own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U03376-1 (Contig-U03376-1Q)
/CSM_Contig/Contig-U03376-1Q.Seq.d
(214 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U03376-1 (Contig-U03376-1Q) /CSM_Contig/Conti... 424 e-119
Contig-U06621-1 (Contig-U06621-1Q) /CSM_Contig/Conti... 38 0.004
Contig-U03165-1 (Contig-U03165-1Q) /CSM_Contig/Conti... 38 0.004
Contig-U10908-1 (Contig-U10908-1Q) /CSM_Contig/Conti... 36 0.014
Contig-U10024-1 (Contig-U10024-1Q) /CSM_Contig/Conti... 36 0.014
Contig-U14892-1 (Contig-U14892-1Q) /CSM_Contig/Conti... 34 0.056
Contig-U14745-1 (Contig-U14745-1Q) /CSM_Contig/Conti... 34 0.056
Contig-U13585-1 (Contig-U13585-1Q) /CSM_Contig/Conti... 34 0.056
Contig-U12749-1 (Contig-U12749-1Q) /CSM_Contig/Conti... 34 0.056
Contig-U09438-1 (Contig-U09438-1Q) /CSM_Contig/Conti... 34 0.056

>Contig-U03376-1 (Contig-U03376-1Q) /CSM_Contig/Contig-U03376-1Q.Seq.d
Length = 214

Score = 424 bits (214), Expect = e-119
Identities = 214/214 (100%)
Strand = Plus / Plus


Query: 1 actgaattagctgaccaagataaaacaaatttaaaatgtgataaaaaattagtagtttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgaattagctgaccaagataaaacaaatttaaaatgtgataaaaaattagtagtttca 60


Query: 61 ctttacatagattcacaaaaagaaaattcagaaacatttaattttcaagttagtgaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctttacatagattcacaaaaagaaaattcagaaacatttaattttcaagttagtgaaatt 120


Query: 121 aaagatgaaaatggtaaattaaaaacattagttataccaatttcagtaaaatttaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaagatgaaaatggtaaattaaaaacattagttataccaatttcagtaaaatttaaaaaa 180


Query: 181 tcagaaacatttataaattatccattagtttatg 214
||||||||||||||||||||||||||||||||||
Sbjct: 181 tcagaaacatttataaattatccattagtttatg 214


>Contig-U06621-1 (Contig-U06621-1Q) /CSM_Contig/Contig-U06621-1Q.Seq.d
Length = 571

Score = 38.2 bits (19), Expect = 0.004
Identities = 31/35 (88%)
Strand = Plus / Plus


Query: 104 ttcaagttagtgaaattaaagatgaaaatggtaaa 138
||||| || ||||||||||||||||| ||| ||||
Sbjct: 107 ttcaatttggtgaaattaaagatgaatatgataaa 141


>Contig-U03165-1 (Contig-U03165-1Q) /CSM_Contig/Contig-U03165-1Q.Seq.d
Length = 1394

Score = 38.2 bits (19), Expect = 0.004
Identities = 22/23 (95%)
Strand = Plus / Plus


Query: 123 agatgaaaatggtaaattaaaaa 145
|||||||||||||| ||||||||
Sbjct: 187 agatgaaaatggtatattaaaaa 209


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6872
Number of Sequences: 6905
Number of extensions: 6872
Number of successful extensions: 2368
Number of sequences better than 10.0: 251
length of query: 214
length of database: 5,674,871
effective HSP length: 15
effective length of query: 199
effective length of database: 5,571,296
effective search space: 1108687904
effective search space used: 1108687904
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 5.31
Homology vs DNA
Query= Contig-U03376-1 (Contig-U03376-1Q) /CSM_Contig/Contig-U03376-1Q.Seq.d
(214 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU271669) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 424 e-115 1
(AU271668) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 424 e-115 1
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 264 e-105 2
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 159 4e-47 4
(AC068131) Homo sapiens chromosome 3 clone RP11-692L6, WORKI... 38 5e-04 7
(CU576534) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.002 5
(BI397193) kt58b05.y3 Strongyloides ratti L2 pAMP1 v1 Chiape... 32 0.003 4
(FC811331) Sr_pASP6_07e01_SP6 S. ratti mixed stage pAMP Stro... 32 0.005 4
(CW655488) OG_BBa0005M20.r OG_BBa Oryza glaberrima genomic c... 42 0.007 2
(EW894033) G894P5126FO10.T0 Ixodes scapularis Pooled Non-inf... 38 0.007 2
(BX953187) Homo sapiens mRNA; EST DKFZp781N2143_r1 (from cl... 52 0.008 1
(CN777413) taf63e05.y1 Hydra EST Darmstadt I Hydra magnipapi... 38 0.015 3
(FB763646) Sequence 511 from Patent WO2008031133. 44 0.017 3
(CU468706) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.019 6
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 40 0.020 14
(CT492411) A BAC library has been constructed from cultivar ... 38 0.021 3
(CC797659) SALK_145227.56.00.x Arabidopsis thaliana TDNA ins... 34 0.023 3
(ED812759) ML__Ba0075A18r ML__Ba Mimulus lewisii genomic, ge... 42 0.026 3
(AC114878) Homo sapiens chromosome 1 clone RP11-272L13, comp... 36 0.028 8
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 32 0.041 14
(AC192849) Pan troglodytes BAC clone CH251-552D1 from chromo... 38 0.045 7
(CU856092) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.055 7
(AM468911) Vitis vinifera contig VV78X059175.11, whole genom... 40 0.058 3
(DL195734) TD ANTIGENS. 40 0.064 2
(CS192874) Sequence 1118 from Patent WO2005103073. 40 0.064 2
(DQ396875) Scenedesmus obliquus strain UTEX 393 chloroplast,... 32 0.085 7
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 46 0.087 13
(EW805269) G893P557FM22.T0 Ixodes scapularis Pooled Non-infe... 36 0.091 2
(EW939190) G894P5189FJ13.T0 Ixodes scapularis Pooled Non-inf... 36 0.092 2
(EI221952) OR__Ba0014G18.r OR__Ba Oryza rufipogon genomic cl... 38 0.10 2
(AQ577370) nbxb0090N04f CUGI Rice BAC Library Oryza sativa J... 38 0.10 2
(EI264789) OR__Ba0072D05.f OR__Ba Oryza rufipogon genomic cl... 38 0.10 2
(CL744846) OR_BBa0081L16.r OR_BBa Oryza nivara genomic clone... 38 0.10 2
(EW816463) G893P553FB16.T0 Ixodes scapularis Pooled Non-infe... 36 0.10 2
(EW940043) G894P5185FM23.T0 Ixodes scapularis Pooled Non-inf... 36 0.10 2
(CP001186) Bacillus cereus G9842, complete genome. 34 0.12 15
(AZ931408) 474.dhz65f11.s1 Saccharomyces unisporus NRRL Y-15... 36 0.12 2
(AL591163) Human DNA sequence from clone RP11-242F24 on chro... 48 0.13 1
(AC108123) Homo sapiens chromosome 16 clone RP11-565I1, WORK... 48 0.13 1
(AC095490) Rattus norvegicus clone CH230-7L12, WORKING DRAFT... 48 0.13 1
(AC168295) Bos taurus clone CH240-182N17, WORKING DRAFT SEQU... 48 0.13 1
(DX926737) MUGQ_CH252P076C10T7_EJ33_093 CHORI-252 Vervet Mon... 48 0.13 1
(AC207866) Spermophilus tridecemlineatus clone VMRC20-232J12... 34 0.13 5
(AC159916) Otolemur garnettii clone CH256-262L20, WORKING DR... 38 0.15 3
(AC189578) Brassica rapa subsp. pekinensis clone KBrH011G12,... 38 0.18 4
(CU570945) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.18 6
(CR547126) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 36 0.20 5
(AC022940) Homo sapiens chromosome 5 clone RP11-710F8 map 5,... 38 0.21 4
(CU466411) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 0.22 6
(CT030044) Zebrafish DNA sequence from clone DKEY-145P14 in ... 34 0.24 5
(CO377949) Lr_CHECF_18A06_M13R Earthworm Head Enriched libra... 38 0.25 2
(AC188386) Callithrix jacchus BAC clone CH259-9H12 from chro... 34 0.29 2
(AC230125) Bos taurus clone CH240-520C11, WORKING DRAFT SEQU... 34 0.29 2
(AC058785) Arabidopsis thaliana chromosome 1 BAC F13N6 genom... 34 0.30 2
(AJ969069) Spiroplasma citri pSci1 plasmid. 38 0.33 2
(AC100767) Homo sapiens chromosome 11, clone RP11-787P24, co... 36 0.35 8
(CP000976) Borrelia duttonii Ly, complete genome. 38 0.36 13
(AJ969070) Spiroplasma citri pSci2 plasmid. 38 0.37 2
(FH494202) CHO_OF4610xf02r1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 0.37 2
(FH021094) CHO_OF400xp19r1.ab1 CHO_OF Nicotiana tabacum geno... 36 0.37 2
(AM624697) Entamoeba dispar GSS, clone dispar111f04.p1k. 34 0.37 2
(EC432237) 133234587 Sea Urchin Tube Foot DH5 cDNA library S... 38 0.37 2
(CL527678) EY02345 Drosophila melanogaster P{EPgy2} P elemen... 36 0.39 3
(BH936670) ode12a07.g1 B.oleracea002 Brassica oleracea genom... 38 0.40 3
(CG769142) TcB42.3_A04_SP6 Tribolium BAC library Tribolium c... 30 0.44 4
(ED461656) AUAC-aaj77h11.g1 Ascaris suum whole genome shotgu... 30 0.44 3
(AE014852) Plasmodium falciparum 3D7 chromosome 12, section ... 38 0.45 9
(CT027813) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.46 5
(AC140023) Medicago truncatula clone mth2-32h4, complete seq... 40 0.47 6
(CR391917) Zebrafish DNA sequence from clone DKEY-97O8 in li... 38 0.48 5
(AC141456) Homo sapiens chromosome 16 clone RP11-451A16, WOR... 32 0.48 6
(AC219857) Bos taurus clone CH240-320C21, WORKING DRAFT SEQU... 34 0.50 10
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 32 0.51 7
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 46 0.51 1
(AC122809) Mus musculus BAC clone RP23-272E5 from chromosome... 46 0.51 1
(AC122184) Mus musculus BAC clone RP23-16C12 from chromosome... 46 0.51 1
(AM448428) Vitis vinifera contig VV78X178948.10, whole genom... 46 0.51 1
(AB180899) Brassica rapa S-47 SP11 gene for S locus protein ... 46 0.51 1
(DL219474) NUCLEIC ACIDS AND PROTEINS FROM STREPTOCOCCUS GRO... 46 0.51 1
(DL215928) NUCLEIC ACIDS AND PROTEINS FROM STREPTOCOCCUS GRO... 46 0.51 1
(CQ655069) Sequence 12026 from Patent WO0234771. 46 0.51 1
(CQ655068) Sequence 12025 from Patent WO0234771. 46 0.51 1
(CQ646918) Sequence 3875 from Patent WO0234771. 46 0.51 1
(AX954529) Sequence 1375 from Patent WO03093306. 46 0.51 1
(AX954528) Sequence 1374 from Patent WO03093306. 46 0.51 1
(AX607045) Sequence 4974 from Patent WO02092818. 46 0.51 1
(AX602210) Sequence 139 from Patent WO02092818. 46 0.51 1
(AX392784) Sequence 74 from Patent WO0212526. 46 0.51 1
(AX392733) Sequence 23 from Patent WO0212526. 46 0.51 1
(AR707131) Sequence 74 from patent US 6933145. 46 0.51 1
(AR707080) Sequence 23 from patent US 6933145. 46 0.51 1
(FP102286) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.51 1
(AC215739) Cavia porcellus clone CH234-182A19, WORKING DRAFT... 46 0.51 1
(AC164242) Bos taurus clone CH240-139A8, *** SEQUENCING IN P... 46 0.51 1
(DU110239) JBnY030A08R Brassica napus BAC library JBnY Brass... 46 0.51 1
(CC561705) CH240_472E2.T7 CHORI-240 Bos taurus genomic clone... 46 0.51 1
(DW412643) HHAGE013373 Human liver regeneration after partia... 46 0.51 1
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 46 0.51 1
(CP000114) Streptococcus agalactiae A909, complete genome. 46 0.51 1
(AL766846) Streptococcus agalactiae NEM316 complete genome, ... 46 0.51 1
(AE009948) Streptococcus agalactiae 2603V/R, complete genome. 46 0.51 1
(AY380826) Lymphocystis disease virus - isolate China, compl... 34 0.51 9
(AC112910) Homo sapiens 3 BAC RP11-273F12 (Roswell Park Canc... 40 0.53 4
(CP000046) Staphylococcus aureus subsp. aureus COL, complete... 36 0.53 14
(AC136841) Medicago truncatula chromosome 8 clone mth2-14n9,... 40 0.54 3
(CP000253) Staphylococcus aureus subsp. aureus NCTC 8325, co... 36 0.55 14
(AQ721587) HS_5557_A1_F07_SP6E RPCI-11 Human Male BAC Librar... 38 0.59 2
(G65489) G-107811 Random genomic STS Homo sapiens STS genomi... 38 0.59 2
(AC073972) Homo sapiens chromosome 12 clone RP11-183G3, WORK... 34 0.60 6
(AC167377) Bos taurus clone CH240-192C22, WORKING DRAFT SEQU... 38 0.60 5
(CP000255) Staphylococcus aureus subsp. aureus USA300_FPR375... 36 0.62 14
(CP000730) Staphylococcus aureus subsp. aureus USA300_TCH151... 36 0.62 14
(AC068416) Homo sapiens chromosome 8 clone RP11-266C9 map 8. 34 0.63 6
(CQ613730) Sequence 41488 from Patent WO0171042. 36 0.66 4
(AP009351) Staphylococcus aureus subsp. aureus str. Newman D... 36 0.67 15
(AC152660) Bos taurus clone CH240-12G12, WORKING DRAFT SEQUE... 38 0.69 6
(AP008207) Oryza sativa (japonica cultivar-group) genomic DN... 34 0.72 2
(AC215354) Solanum lycopersicum chromosome 2 clone C02HBa001... 30 0.73 8
(AL356216) Human DNA sequence from clone RP4-613J12 on chrom... 38 0.74 5
(CU993805) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.76 5
(AC232303) Homo sapiens FOSMID clone ABC7-40266400M14 from c... 30 0.76 5
(AC108052) Homo sapiens BAC clone RP11-335K21 from 4, comple... 36 0.84 5
(FF806245) XABT97265.rev Gateway compatible cien cDNA librar... 42 0.85 2
(AQ285615) RPCI11-78G18.TJ RPCI-11 Homo sapiens genomic clon... 38 0.85 2
(EA380738) Sequence 29561 from patent US 7314974. 34 0.85 2
(AC170108) Bos taurus clone CH240-227H5, WORKING DRAFT SEQUE... 36 0.86 6
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 36 0.89 11
(AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3... 32 0.90 8
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome. 32 0.90 9
(EA690294) Sequence 69173 from patent US 7365185. 34 0.94 3
(AY653733) Acanthamoeba polyphaga mimivirus, complete genome. 38 0.94 13
(AC212870) Zea mays chromosome 2 clone CH201-244G16; ZMMBBc0... 44 0.96 2
(EA048113) Sequence 4 from patent US 7154021. 32 0.99 2
(GP062386) Sequence 4 from patent US 7485770. 32 0.99 2
(AX196297) Sequence 4 from Patent WO0151627. 32 1.0 2
(AC095960) Rattus norvegicus clone CH230-24A9, *** SEQUENCIN... 32 1.0 2
(AX323729) Sequence 217 from Patent WO0192565. 38 1.0 3
(GM996077) Sequence 217 from Patent EP2014776. 38 1.0 3
(AC127746) Rattus norvegicus clone CH230-28J15, *** SEQUENCI... 32 1.0 2
(AP003455) Oryza sativa Japonica Group genomic DNA, chromoso... 34 1.1 2
(AP003452) Oryza sativa Japonica Group genomic DNA, chromoso... 34 1.1 2
(CU464158) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 1.1 6
(AC226058) Homo sapiens FOSMID clone ABC14-50160600N22 from ... 30 1.1 5
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 30 1.1 10
(CP001288) Cyanothece sp. PCC 8801 plasmid pP880101, complet... 42 1.1 2
(AC157188) Bos taurus clone CH240-66F14, WORKING DRAFT SEQUE... 40 1.1 5
(Z79754) Caenorhabditis elegans Cosmid F25H2. 34 1.1 2
(BZ018395) oei13b02.b1 B.oleracea002 Brassica oleracea genom... 38 1.2 2
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 30 1.2 11
(CU657949) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 1.2 7
(AC012493) Homo sapiens BAC clone RP11-292K15 from 2, comple... 42 1.2 5
(EJ718724) 1092959438416 Global-Ocean-Sampling_GS-30-02-01-1... 36 1.2 2
(DJ380567) Novel Human Kinases and Polynucleotides Encoding ... 36 1.2 3
(AX224518) Sequence 50 from Patent WO0161016. 36 1.2 3
(EA688745) Sequence 67624 from patent US 7365185. 34 1.2 2
(AG308651) Mus musculus molossinus DNA, clone:MSMg01-090G14.... 40 1.2 2
(AC188935) Canis familiaris chromosome 27, clone XX-470A24, ... 42 1.2 6
(AR338755) Sequence 246 from patent US 6569662. 36 1.2 3
(AX658014) Sequence 4 from Patent WO03000873. 36 1.2 3
(AL050385) Homo sapiens mRNA; cDNA DKFZp564L2416 (from clone... 36 1.2 3
(BA000018) Staphylococcus aureus subsp. aureus N315 DNA, com... 36 1.2 13
(AR338754) Sequence 245 from patent US 6569662. 36 1.2 3
(AP000961) Homo sapiens genomic DNA, chromosome 21q21.1-q21.... 38 1.3 4
(EI910193) VUH2-32C7TV VUUBBa (VUH2) Vigna unguiculata genom... 42 1.3 2
(EJ019368) 1095439026609 Global-Ocean-Sampling_GS-26-01-01-1... 36 1.3 2
(CU929477) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.3 5
(EJ474136) 1095403430590 Global-Ocean-Sampling_GS-28-01-01-1... 40 1.3 2
(AC087272) Homo sapiens chromosome 8, clone RP11-139G7, comp... 38 1.3 6
(ER423112) 1092963725410 Global-Ocean-Sampling_GS-35-01-01-1... 40 1.3 2
(EA654238) Sequence 33117 from patent US 7365185. 34 1.3 2
(EJ100306) 1095467039345 Global-Ocean-Sampling_GS-26-01-01-1... 42 1.4 2
(AC140905) Homo sapiens chromosome 16 clone RP11-844O12, WOR... 34 1.4 5
(AC207834) Saimiri boliviensis boliviensis clone CH254-44M3,... 34 1.4 6
(AC108118) Homo sapiens chromosome 5 clone RP11-44C2, comple... 38 1.4 5
(EJ073105) 1095458101187 Global-Ocean-Sampling_GS-26-01-01-1... 32 1.4 3
(ER580277) 1093015833857 Global-Ocean-Sampling_GS-36-01-01-2... 34 1.4 2
(ET881819) CHO_OF419xn03r1.ab1 CHO_OF Nicotiana tabacum geno... 32 1.4 2
(ET761550) CHO_OF081xb23f1.ab1 CHO_OF Nicotiana tabacum geno... 32 1.4 2
(AM434497) Vitis vinifera contig VV78X071835.12, whole genom... 32 1.4 6
(ET870330) CHO_OF302xf20f1.ab1 CHO_OF Nicotiana tabacum geno... 32 1.4 2
(AC147009) Medicago truncatula clone mth2-139j3, complete se... 40 1.4 5
(ER337072) 1092344316162 Global-Ocean-Sampling_GS-34-01-01-1... 36 1.4 2
(AC007332) Homo sapiens chromosome 4, *** SEQUENCING IN PROG... 30 1.4 7
(AM481310) Vitis vinifera contig VV78X248272.6, whole genome... 36 1.4 5
(AL844507) Plasmodium falciparum chromosome 8. 34 1.4 11
(AP004928) Lotus japonicus genomic DNA, chromosome 2, clone:... 32 1.5 7
(AC135414) Medicago truncatula clone mth2-8n20, complete seq... 40 1.5 5
(BA000017) Staphylococcus aureus subsp. aureus Mu50 DNA, com... 36 1.5 13
(AP009324) Staphylococcus aureus subsp. aureus Mu3 DNA, comp... 36 1.5 13
(DQ088855) Uncultured bacterium eBACmed18B02 predicted fumar... 30 1.5 5
(EJ922282) 1093018653768 Global-Ocean-Sampling_GS-30-02-01-1... 36 1.6 2
(CU695316) Brassica rapa subsp. pekinensis clone KBrH090J04,... 32 1.6 6
(CU466474) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 1.6 6
(AC117202) Mus musculus BAC clone RP23-248L5 from 14, comple... 32 1.6 6
(CP000736) Staphylococcus aureus subsp. aureus JH1, complete... 36 1.6 13
(CP000703) Staphylococcus aureus subsp. aureus JH9, complete... 36 1.6 13
(AC217144) Solanum lycopersicum chromosome 9 clone C09SLm000... 34 1.6 5
(ER414186) 1095390080736 Global-Ocean-Sampling_GS-34-01-01-1... 36 1.6 2
(CT963108) Medicago truncatula chromosome 5 clone mth4-37c5,... 38 1.6 7
(CU856637) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 1.6 6
(AC069522) Homo sapiens chromosome 3 clone RP11-129K1, WORKI... 40 1.7 6
(AC169124) Medicago truncatula chromosome 2 BAC clone mte1-3... 36 1.7 5
(AY619685) Uncultured gamma proteobacterium eBACHOT4E07 clon... 38 1.7 4
(AE017243) Mycoplasma hyopneumoniae J, complete genome. 36 1.8 13
(CP000939) Clostridium botulinum B1 str. Okra, complete genome. 34 1.8 12
(ER605718) 1093016275197 Global-Ocean-Sampling_GS-36-01-01-2... 32 1.8 3
(AC109146) Mus musculus chromosome 8, clone RP23-54G23, comp... 34 1.9 5
(CP000727) Clostridium botulinum A str. Hall, complete genome. 34 1.9 11
(DQ927305) Tetrahymena pigmentosa strain UM1060 mitochondrio... 34 1.9 7
(AC187716) Callithrix jacchus BAC clone CH259-71H12 from chr... 40 1.9 6
(CR450835) Zebrafish DNA sequence from clone CH211-179C12 in... 44 2.0 1
(BX890598) Zebrafish DNA sequence from clone DKEYP-22H4 in l... 44 2.0 1
(CU674834) Synthetic construct Homo sapiens gateway clone IM... 44 2.0 1
(AL773550) Mouse DNA sequence from clone RP23-433P3 on chrom... 44 2.0 1
(AB169753) Macaca fascicularis brain cDNA, clone: QnpA-18508... 44 2.0 1
(AB168777) Macaca fascicularis testis cDNA, clone: QtsA-1473... 44 2.0 1
(AM447993) Vitis vinifera, whole genome shotgun sequence, co... 44 2.0 1
(AC215944) Populus trichocarpa clone POP073-M17, complete se... 44 2.0 1
(GC692538) Sequence 1911 from patent US 6812339. 44 2.0 1
(GC691270) Sequence 643 from patent US 6812339. 44 2.0 1
(GC626358) Sequence 29808 from patent US 7432049. 44 2.0 1
(DD388939) COMPOSITIONS AND METHODS FOR THE DIAGNOSIS AND TR... 44 2.0 1
(CS350928) Sequence 312 from Patent WO2006013561. 44 2.0 1
(CS039449) Sequence 3 from Patent WO2005019258. 44 2.0 1
(CS030497) Sequence 3 from Patent WO2005016962. 44 2.0 1
(CQ783848) Sequence 3988 from Patent EP1396543. 44 2.0 1
(CQ782688) Sequence 2828 from Patent EP1396543. 44 2.0 1
(CQ781279) Sequence 1419 from Patent EP1396543. 44 2.0 1
(CQ720872) Sequence 6806 from Patent WO02068579. 44 2.0 1
(CQ684882) Sequence 29808 from Patent WO02070737. 44 2.0 1
(BD127864) Primer for synthesizing full-length cDNA and use ... 44 2.0 1
(BD127264) Primer for synthesizing full-length cDNA and use ... 44 2.0 1
(BD125988) Primer for synthesizing full-length cDNA and use ... 44 2.0 1
(BD100991) Novel genes cloned in humanneuroblastoma and frag... 44 2.0 1
(BD100982) Novel genes cloned in humanneuroblastoma and frag... 44 2.0 1
(BD021053) Novel gene and novel gene fragment cloned in huma... 44 2.0 1
(BD021044) Novel gene and novel gene fragment cloned in huma... 44 2.0 1
(GN000808) Sequence 3 from Patent EP2014675. 44 2.0 1
(GC750120) Sequence 65365 from patent US 6812339. 44 2.0 1
(GC715211) Sequence 30456 from patent US 6812339. 44 2.0 1
(GC698408) Sequence 13653 from patent US 6812339. 44 2.0 1
(GC697140) Sequence 12385 from patent US 6812339. 44 2.0 1
(AR454604) Sequence 77 from patent US 6682888. 44 2.0 1
(AR157612) Sequence 1 from patent US 6245539. 44 2.0 1
(BC105358) Bos taurus asparaginyl-tRNA synthetase, mRNA (cDN... 44 2.0 1
(D84273) Homo sapiens mRNA for Asparaginyl tRNA Synthetase, ... 44 2.0 1
(BC001687) Homo sapiens asparaginyl-tRNA synthetase, mRNA (c... 44 2.0 1
(AL355595) Human DNA sequence from clone RP11-276G3 on chrom... 44 2.0 1
(AK297777) Homo sapiens cDNA FLJ52703 complete cds, highly s... 44 2.0 1
(AK294763) Homo sapiens cDNA FLJ56692 complete cds, highly s... 44 2.0 1
(AK294364) Homo sapiens cDNA FLJ52485 complete cds, highly s... 44 2.0 1
(AK293985) Homo sapiens cDNA FLJ54981 complete cds, highly s... 44 2.0 1
(AK222835) Homo sapiens mRNA for asparaginyl-tRNA synthetase... 44 2.0 1
(AK129897) Homo sapiens cDNA FLJ26387 fis, clone HRT07202, h... 44 2.0 1
(AK075160) Homo sapiens cDNA FLJ90679 fis, clone PLACE100574... 44 2.0 1
(AK074756) Homo sapiens cDNA FLJ90275 fis, clone NT2RP100026... 44 2.0 1
(AJ000334) Homo sapiens mRNA for cytosolic asparaginyl-tRNA ... 44 2.0 1
(AC226149) Homo sapiens FOSMID clone ABC7-43057100K9 from ch... 44 2.0 1
(AC100847) Homo sapiens chromosome 18, clone RP11-706P11, co... 44 2.0 1
(AC027097) Homo sapiens chromosome 18, clone RP11-35G9, comp... 44 2.0 1
(AC013468) Homo sapiens BAC clone RP11-455J20 from 2, comple... 44 2.0 1
(AC162824) Bos taurus clone CH240-125B6, WORKING DRAFT SEQUE... 44 2.0 1
(AC153126) Bos taurus clone CH240-33H17, WORKING DRAFT SEQUE... 44 2.0 1
(CU651598) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 2.0 1
(CU469423) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 2.0 1
(AC093466) Mus musculus clone RP23-4M7, WORKING DRAFT SEQUEN... 44 2.0 1
(AC068072) Homo sapiens chromosome 18 clone RP11-35G9, WORKI... 44 2.0 1
(CT030147) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 2.0 1
(AP002417) Homo sapiens genomic DNA, chromosome 18q21 clone:... 44 2.0 1
(AP001543) Homo sapiens genomic DNA, chromosome 18q21 clone:... 44 2.0 1
(AC231925) Medicago truncatula chromosome 7 clone mth2-25h7,... 44 2.0 1
(AC222633) Bos taurus clone CH240-443M20, WORKING DRAFT SEQU... 44 2.0 1
(AC222101) Bos taurus clone CH240-372A3, WORKING DRAFT SEQUE... 44 2.0 1
(AC221901) Bos taurus clone CH240-378I2, WORKING DRAFT SEQUE... 44 2.0 1
(AC219267) Bos taurus clone CH240-334O1, WORKING DRAFT SEQUE... 44 2.0 1
(AC208425) Zea mays chromosome 6 clone CH201-259E12; ZMMBBc0... 44 2.0 1
(AC175398) Bos taurus clone CH240-139A5, *** SEQUENCING IN P... 44 2.0 1
(AC171122) Bos taurus clone CH240-212J14, WORKING DRAFT SEQU... 44 2.0 1
(AC170373) Bos taurus clone CH240-219C22, WORKING DRAFT SEQU... 44 2.0 1
(AC009270) Homo sapiens chromosome 18 clone RP11-49M12 map 1... 44 2.0 1
(CR859623) Pongo abelii mRNA; cDNA DKFZp459L1234 (from clone... 44 2.0 1
(CR609633) full-length cDNA clone CS0DN002YD04 of Adult brai... 44 2.0 1
(CR602229) full-length cDNA clone CS0DI047YB22 of Placenta C... 44 2.0 1
(BH404399) AG-ND-155I7.TR ND-TAM Anopheles gambiae genomic c... 44 2.0 1
(BH394736) AG-ND-162O17.TR ND-TAM Anopheles gambiae genomic ... 44 2.0 1
(AZ536204) ENTBV65TF Entamoeba histolytica Sheared DNA Entam... 44 2.0 1
(AZ532404) ENTCH26TR Entamoeba histolytica Sheared DNA Entam... 44 2.0 1
(EJ973178) 1093022097050 Global-Ocean-Sampling_GS-30-02-01-1... 44 2.0 1
(EJ923501) 1093018771774 Global-Ocean-Sampling_GS-30-02-01-1... 44 2.0 1
(EJ922080) 1093018649503 Global-Ocean-Sampling_GS-30-02-01-1... 44 2.0 1
(EJ836033) 1093017634741 Global-Ocean-Sampling_GS-30-02-01-1... 44 2.0 1
(EJ796032) 1093017400892 Global-Ocean-Sampling_GS-30-02-01-1... 44 2.0 1
(EJ780767) 1093017248948 Global-Ocean-Sampling_GS-30-02-01-1... 44 2.0 1
(AQ281511) RPCI11-88L20.TJ RPCI-11 Homo sapiens genomic clon... 44 2.0 1
(DQ052940) Homo sapiens NARS gene, VIRTUAL TRANSCRIPT, parti... 44 2.0 1
(DH029399) Oryzias latipes Fosmid clone:GOLWFno53_k10, rever... 44 2.0 1
(DH029388) Oryzias latipes Fosmid clone:GOLWFno53_j24, rever... 44 2.0 1
(CT366928) Sus scrofa genomic clone CH242-50I6, genomic surv... 44 2.0 1
(CC953273) BOICP23TR BO_1.4_1.6_KB_nuc Brassica oleracea gen... 44 2.0 1
(EH159472) LB01372.CR_I07 GC_BGC-13 Bos taurus cDNA clone IM... 44 2.0 1
(EH158230) LB01367.CR_L15 GC_BGC-13 Bos taurus cDNA clone IM... 44 2.0 1
(EH143870) LB01188.CR_I18 GC_BGC-11 Bos taurus cDNA clone IM... 44 2.0 1
(EH130592) LB01140.CR_H08 GC_BGC-11 Bos taurus cDNA clone IM... 44 2.0 1
(EH076340) PMDA493TR Perkinsus marinus small insert cDNA lib... 44 2.0 1
(EC822817) SME00009491 esmbsro2 Sawyeria marylandensis cDNA,... 44 2.0 1
(EC821529) SME00008011 esmbsro2 Sawyeria marylandensis cDNA,... 44 2.0 1
(AV723330) Homo sapiens cDNA clone:HTBAIA11, 5'end, expresse... 44 2.0 1
(AV695699) Homo sapiens cDNA clone:GKCBHH09, 5'end, expresse... 44 2.0 1
(AV688112) Homo sapiens cDNA clone:GKCBGE10, 5'end, expresse... 44 2.0 1
(AV683678) Homo sapiens cDNA clone:GKCBIH02, 5'end, expresse... 44 2.0 1
(AV683068) Homo sapiens cDNA clone:GKCEBF07, 5'end, expresse... 44 2.0 1
(AV661139) Homo sapiens cDNA clone:GLCGPB01, 3'end, expresse... 44 2.0 1
(EB302845) CNSN01-F-061630-501 Normalized CNS library (juven... 44 2.0 1
(EB279513) CNSN01-F-033658-501 Normalized CNS library (juven... 44 2.0 1
(DY495970) sh2P0017I23_F.ab1 adult sheep fracture callus 7d ... 44 2.0 1
(DY211831) 000217BCEB008944HT BCEB Bos taurus cDNA 5', mRNA ... 44 2.0 1
(DY056673) 000206BCXB003799HT BCXB Bos taurus cDNA 5', mRNA ... 44 2.0 1
(DY042294) 000406BAGA004220HT BAGA Bos taurus cDNA 5', mRNA ... 44 2.0 1
(DW442680) HHAGE040410 Human liver regeneration after partia... 44 2.0 1
(DW441955) HHAGE039685 Human liver regeneration after partia... 44 2.0 1
(DW441008) HHAGE003738 Human liver regeneration after partia... 44 2.0 1
(DW432949) HHAGE031679 Human liver regeneration after partia... 44 2.0 1
(DV909740) LB02815.CR_G11 GC_BGC-28 Bos taurus cDNA clone IM... 44 2.0 1
(DV870617) LB02511.CR_N05 GC_BGC-25 Bos taurus cDNA clone IM... 44 2.0 1
(DV842770) LB01212.CR_L05 GC_BGC-12 Bos taurus cDNA clone IM... 44 2.0 1
(DV832386) LB01922.CR_L04 GC_BGC-19 Bos taurus cDNA clone IM... 44 2.0 1
(DV832171) LB01922.CR_A08 GC_BGC-19 Bos taurus cDNA clone IM... 44 2.0 1
(DV827572) LB0208.CR_L09 GC_BGC-20 Bos taurus cDNA clone IMA... 44 2.0 1
(DV827071) LB0206.CR_C06 GC_BGC-20 Bos taurus cDNA clone IMA... 44 2.0 1
(DV820320) LB0175.CR_M10 GC_BGC-17 Bos taurus cDNA clone IMA... 44 2.0 1
(DV801559) LB01318.CR_B16 GC_BGC-13 Bos taurus cDNA clone IM... 44 2.0 1
(DT827977) LB00255.CR_B12 GC_BGC-02 Bos taurus cDNA clone IM... 44 2.0 1
(DT825999) LB00241.CR_D19 GC_BGC-02 Bos taurus cDNA clone IM... 44 2.0 1
(AU280338) Homo sapiens cDNA clone:N1ESE2001512, 5'end, expr... 44 2.0 1
(DR978337) SM011938 Brain 3' EST Homo sapiens cDNA clone ID_... 44 2.0 1
(DR978331) SM011924 Brain 3' EST Homo sapiens cDNA clone ID_... 44 2.0 1
(DR762387) HESC4_139_G04.g1_A037 NIH_MGC_262 Homo sapiens cD... 44 2.0 1
(DR157933) HESC2_84_A08.g1_A035 NIH_MGC_258 Homo sapiens cDN... 44 2.0 1
(DN993707) TC110958 Human adult whole brain, large insert, p... 44 2.0 1
(DN919307) MCF7RNAL26D18TF Human MCF7 breast cancer cell lin... 44 2.0 1
(DC645214) Macaca fascicularis mRNA, clone: QreB-20057, 5' e... 44 2.0 1
(DC628735) Macaca fascicularis mRNA, clone: QlvC-28186, 5' e... 44 2.0 1
(DC428536) Homo sapiens cDNA, clone MESTC2000454, 5' end, mR... 44 2.0 1
(DC428369) Homo sapiens cDNA, clone LYMPB2001767, 5' end, mR... 44 2.0 1
(DC428282) Homo sapiens cDNA, clone LYMPB2000566, 5' end, mR... 44 2.0 1
(DC428230) Homo sapiens cDNA, clone LYMPB1000087, 5' end, mR... 44 2.0 1
(DC427972) Homo sapiens cDNA, clone HELAC2000313, 5' end, mR... 44 2.0 1
(DC427745) Homo sapiens cDNA, clone ERLTF2000053, 5' end, mR... 44 2.0 1
(DC425288) Homo sapiens cDNA, clone N1ESE2002714, 5' end, mR... 44 2.0 1
(DC424864) Homo sapiens cDNA, clone AHMSC2000016, 5' end, mR... 44 2.0 1
(DC424673) Homo sapiens cDNA, clone PLACE1011204, 5' end, mR... 44 2.0 1
(DC424654) Homo sapiens cDNA, clone PLACE1009256, 5' end, mR... 44 2.0 1
(DC424636) Homo sapiens cDNA, clone PLACE1007695, 5' end, mR... 44 2.0 1
(DC424632) Homo sapiens cDNA, clone PLACE1007273, 5' end, mR... 44 2.0 1
(DC424631) Homo sapiens cDNA, clone PLACE1007262, 5' end, mR... 44 2.0 1
(DC424343) Homo sapiens cDNA, clone NT2RP2005839, 5' end, mR... 44 2.0 1
(DC424277) Homo sapiens cDNA, clone NT2RP2002337, 5' end, mR... 44 2.0 1
(DC423668) Homo sapiens cDNA, clone UTERU3019341, 5' end, mR... 44 2.0 1
(DC421623) Homo sapiens cDNA, clone UTERU2029339, 5' end, mR... 44 2.0 1
(DC421461) Homo sapiens cDNA, clone UTERU2026828, 5' end, mR... 44 2.0 1
(DC421248) Homo sapiens cDNA, clone UTERU2023794, 5' end, mR... 44 2.0 1
(DC420830) Homo sapiens cDNA, clone UTERU2017439, 5' end, mR... 44 2.0 1
(DC420631) Homo sapiens cDNA, clone UTERU2014761, 5' end, mR... 44 2.0 1
(DC420541) Homo sapiens cDNA, clone UTERU2013455, 5' end, mR... 44 2.0 1
(DC420522) Homo sapiens cDNA, clone UTERU2013203, 5' end, mR... 44 2.0 1
(DC420487) Homo sapiens cDNA, clone UTERU2012774, 5' end, mR... 44 2.0 1
(DC420059) Homo sapiens cDNA, clone UTERU2006099, 5' end, mR... 44 2.0 1
(DC420052) Homo sapiens cDNA, clone UTERU2005996, 5' end, mR... 44 2.0 1
(DC419813) Homo sapiens cDNA, clone UTERU2002596, 5' end, mR... 44 2.0 1
(DC419586) Homo sapiens cDNA, clone UMVEN2000400, 5' end, mR... 44 2.0 1
(DC419527) Homo sapiens cDNA, clone TUTER2002745, 5' end, mR... 44 2.0 1
(DC419339) Homo sapiens cDNA, clone TUTER2000092, 5' end, mR... 44 2.0 1
(DC419085) Homo sapiens cDNA, clone TSTOM1000045, 5' end, mR... 44 2.0 1
(DC415966) Homo sapiens cDNA, clone TRACH3007262, 5' end, mR... 44 2.0 1
(DC415662) Homo sapiens cDNA, clone TRACH3003949, 5' end, mR... 44 2.0 1
(DC415267) Homo sapiens cDNA, clone TRACH2025921, 5' end, mR... 44 2.0 1
(DC414708) Homo sapiens cDNA, clone TRACH2017796, 5' end, mR... 44 2.0 1
(DC414553) Homo sapiens cDNA, clone TRACH2014827, 5' end, mR... 44 2.0 1
(DC414519) Homo sapiens cDNA, clone TRACH2013944, 5' end, mR... 44 2.0 1
(DC414252) Homo sapiens cDNA, clone TRACH2008956, 5' end, mR... 44 2.0 1
(DC414112) Homo sapiens cDNA, clone TRACH2006287, 5' end, mR... 44 2.0 1
(DC413937) Homo sapiens cDNA, clone TRACH2002788, 5' end, mR... 44 2.0 1
(DC412442) Homo sapiens cDNA, clone TKIDN2015306, 5' end, mR... 44 2.0 1
(DC411899) Homo sapiens cDNA, clone TKIDN2008493, 5' end, mR... 44 2.0 1
(DC411719) Homo sapiens cDNA, clone TKIDN2006510, 5' end, mR... 44 2.0 1
(DC411498) Homo sapiens cDNA, clone TKIDN2004004, 5' end, mR... 44 2.0 1
(DC411336) Homo sapiens cDNA, clone TKIDN2002190, 5' end, mR... 44 2.0 1
(DC411189) Homo sapiens cDNA, clone TKIDN2000681, 5' end, mR... 44 2.0 1
(DC411031) Homo sapiens cDNA, clone THYMU3046871, 5' end, mR... 44 2.0 1
(DC410784) Homo sapiens cDNA, clone THYMU3043711, 5' end, mR... 44 2.0 1
(DC410772) Homo sapiens cDNA, clone THYMU3043557, 5' end, mR... 44 2.0 1
(DC410685) Homo sapiens cDNA, clone THYMU3042500, 5' end, mR... 44 2.0 1
(DC410301) Homo sapiens cDNA, clone THYMU3037660, 5' end, mR... 44 2.0 1
(DC409507) Homo sapiens cDNA, clone THYMU3027507, 5' end, mR... 44 2.0 1
(DC409310) Homo sapiens cDNA, clone THYMU3024974, 5' end, mR... 44 2.0 1
(DC409267) Homo sapiens cDNA, clone THYMU3024548, 5' end, mR... 44 2.0 1
(DC409116) Homo sapiens cDNA, clone THYMU3022775, 5' end, mR... 44 2.0 1
(DC408776) Homo sapiens cDNA, clone THYMU3018156, 5' end, mR... 44 2.0 1
(DC408745) Homo sapiens cDNA, clone THYMU3017664, 5' end, mR... 44 2.0 1
(DC408577) Homo sapiens cDNA, clone THYMU3015032, 5' end, mR... 44 2.0 1
(DC408570) Homo sapiens cDNA, clone THYMU3014921, 5' end, mR... 44 2.0 1
(DC408540) Homo sapiens cDNA, clone THYMU3014409, 5' end, mR... 44 2.0 1
(DC408475) Homo sapiens cDNA, clone THYMU3013349, 5' end, mR... 44 2.0 1
(DC408393) Homo sapiens cDNA, clone THYMU3012131, 5' end, mR... 44 2.0 1
(DC408299) Homo sapiens cDNA, clone THYMU3010574, 5' end, mR... 44 2.0 1
(DC408269) Homo sapiens cDNA, clone THYMU3010178, 5' end, mR... 44 2.0 1
(DC407973) Homo sapiens cDNA, clone THYMU3006266, 5' end, mR... 44 2.0 1
(DC407715) Homo sapiens cDNA, clone THYMU3002232, 5' end, mR... 44 2.0 1
(DC407682) Homo sapiens cDNA, clone THYMU3001800, 5' end, mR... 44 2.0 1
(DC407663) Homo sapiens cDNA, clone THYMU3001444, 5' end, mR... 44 2.0 1
(DC407521) Homo sapiens cDNA, clone THYMU2040888, 5' end, mR... 44 2.0 1
(DC406384) Homo sapiens cDNA, clone THYMU2027241, 5' end, mR... 44 2.0 1
(DC405917) Homo sapiens cDNA, clone THYMU2019967, 5' end, mR... 44 2.0 1
(DC405701) Homo sapiens cDNA, clone THYMU2016434, 5' end, mR... 44 2.0 1
(DC405533) Homo sapiens cDNA, clone THYMU2013847, 5' end, mR... 44 2.0 1
(DC405262) Homo sapiens cDNA, clone THYMU2009120, 5' end, mR... 44 2.0 1
(DC405013) Homo sapiens cDNA, clone THYMU2005437, 5' end, mR... 44 2.0 1
(DC404593) Homo sapiens cDNA, clone THYMU1000042, 5' end, mR... 44 2.0 1
(DC403907) Homo sapiens cDNA, clone TESTI4045409, 5' end, mR... 44 2.0 1
(DC402522) Homo sapiens cDNA, clone TESTI4029078, 5' end, mR... 44 2.0 1
(DC402293) Homo sapiens cDNA, clone TESTI4026341, 5' end, mR... 44 2.0 1
(DC402215) Homo sapiens cDNA, clone TESTI4025558, 5' end, mR... 44 2.0 1
(DC402076) Homo sapiens cDNA, clone TESTI4023965, 5' end, mR... 44 2.0 1
(DC401779) Homo sapiens cDNA, clone TESTI4020402, 5' end, mR... 44 2.0 1
(DC401532) Homo sapiens cDNA, clone TESTI4017551, 5' end, mR... 44 2.0 1
(DC398473) Homo sapiens cDNA, clone TESTI2038608, 5' end, mR... 44 2.0 1
(DC395130) Homo sapiens cDNA, clone TESTI2005159, 5' end, mR... 44 2.0 1
(DC394257) Homo sapiens cDNA, clone TESOP2006114, 5' end, mR... 44 2.0 1
(DC394094) Homo sapiens cDNA, clone TESOP2004210, 5' end, mR... 44 2.0 1
(DC392977) Homo sapiens cDNA, clone TBAES2004303, 5' end, mR... 44 2.0 1
(DC392974) Homo sapiens cDNA, clone TBAES2004295, 5' end, mR... 44 2.0 1
(DC392555) Homo sapiens cDNA, clone STOMA2007692, 5' end, mR... 44 2.0 1
(DC392463) Homo sapiens cDNA, clone STOMA2006113, 5' end, mR... 44 2.0 1
(DC392313) Homo sapiens cDNA, clone STOMA2003115, 5' end, mR... 44 2.0 1
(DC392103) Homo sapiens cDNA, clone SPLEN2042895, 5' end, mR... 44 2.0 1
(DC392056) Homo sapiens cDNA, clone SPLEN2042390, 5' end, mR... 44 2.0 1
(DC391943) Homo sapiens cDNA, clone SPLEN2040858, 5' end, mR... 44 2.0 1
(DC391744) Homo sapiens cDNA, clone SPLEN2038344, 5' end, mR... 44 2.0 1
(DC391694) Homo sapiens cDNA, clone SPLEN2037709, 5' end, mR... 44 2.0 1
(DC391510) Homo sapiens cDNA, clone SPLEN2035273, 5' end, mR... 44 2.0 1
(DC391336) Homo sapiens cDNA, clone SPLEN2032666, 5' end, mR... 44 2.0 1
(DC391063) Homo sapiens cDNA, clone SPLEN2028981, 5' end, mR... 44 2.0 1
(DC390967) Homo sapiens cDNA, clone SPLEN2027891, 5' end, mR... 44 2.0 1
(DC390627) Homo sapiens cDNA, clone SPLEN2024036, 5' end, mR... 44 2.0 1
(DC390524) Homo sapiens cDNA, clone SPLEN2022811, 5' end, mR... 44 2.0 1
(DC390488) Homo sapiens cDNA, clone SPLEN2022263, 5' end, mR... 44 2.0 1
(DC390432) Homo sapiens cDNA, clone SPLEN2021481, 5' end, mR... 44 2.0 1
(DC390297) Homo sapiens cDNA, clone SPLEN2019706, 5' end, mR... 44 2.0 1
(DC390124) Homo sapiens cDNA, clone SPLEN2017584, 5' end, mR... 44 2.0 1
(DC390122) Homo sapiens cDNA, clone SPLEN2017578, 5' end, mR... 44 2.0 1
(DC390030) Homo sapiens cDNA, clone SPLEN2016465, 5' end, mR... 44 2.0 1
(DC389890) Homo sapiens cDNA, clone SPLEN2014661, 5' end, mR... 44 2.0 1
(DC389298) Homo sapiens cDNA, clone SPLEN2006908, 5' end, mR... 44 2.0 1
(DC389286) Homo sapiens cDNA, clone SPLEN2006651, 5' end, mR... 44 2.0 1
(DC388953) Homo sapiens cDNA, clone SPLEN2000419, 5' end, mR... 44 2.0 1
(DC388764) Homo sapiens cDNA, clone SMINT2017491, 5' end, mR... 44 2.0 1
(DC388721) Homo sapiens cDNA, clone SMINT2016897, 5' end, mR... 44 2.0 1
(DC388605) Homo sapiens cDNA, clone SMINT2015252, 5' end, mR... 44 2.0 1
(DC388485) Homo sapiens cDNA, clone SMINT2013800, 5' end, mR... 44 2.0 1
(DC388335) Homo sapiens cDNA, clone SMINT2012163, 5' end, mR... 44 2.0 1
(DC388148) Homo sapiens cDNA, clone SMINT2009467, 5' end, mR... 44 2.0 1
(DC387612) Homo sapiens cDNA, clone SMINT2002178, 5' end, mR... 44 2.0 1
(DC387526) Homo sapiens cDNA, clone SMINT2001088, 5' end, mR... 44 2.0 1
(DC387415) Homo sapiens cDNA, clone SKNSH2010079, 5' end, mR... 44 2.0 1
(DC387014) Homo sapiens cDNA, clone SKNSH2004123, 5' end, mR... 44 2.0 1
(DC387011) Homo sapiens cDNA, clone SKNSH2004056, 5' end, mR... 44 2.0 1
(DC386955) Homo sapiens cDNA, clone SKNSH2003350, 5' end, mR... 44 2.0 1
(DC386899) Homo sapiens cDNA, clone SKNSH2002430, 5' end, mR... 44 2.0 1
(DC386746) Homo sapiens cDNA, clone SKNSH1000318, 5' end, mR... 44 2.0 1
(DC386682) Homo sapiens cDNA, clone SKNMC2008797, 5' end, mR... 44 2.0 1
(DC386629) Homo sapiens cDNA, clone SKNMC2007658, 5' end, mR... 44 2.0 1
(DC386459) Homo sapiens cDNA, clone SKNMC2005503, 5' end, mR... 44 2.0 1
(DC386332) Homo sapiens cDNA, clone SKNMC2004109, 5' end, mR... 44 2.0 1
(DC386210) Homo sapiens cDNA, clone SKNMC2002679, 5' end, mR... 44 2.0 1
(DC386103) Homo sapiens cDNA, clone SKNMC2001487, 5' end, mR... 44 2.0 1
(DC385999) Homo sapiens cDNA, clone SKNMC1000189, 5' end, mR... 44 2.0 1
(DC384814) Homo sapiens cDNA, clone PUAEN2005826, 5' end, mR... 44 2.0 1
(DC384703) Homo sapiens cDNA, clone PUAEN2004781, 5' end, mR... 44 2.0 1
(DC384654) Homo sapiens cDNA, clone PUAEN2004238, 5' end, mR... 44 2.0 1
(DC384636) Homo sapiens cDNA, clone PUAEN2003999, 5' end, mR... 44 2.0 1
(DC384228) Homo sapiens cDNA, clone PROST2019760, 5' end, mR... 44 2.0 1
(DC384215) Homo sapiens cDNA, clone PROST2019630, 5' end, mR... 44 2.0 1
(DC384110) Homo sapiens cDNA, clone PROST2018054, 5' end, mR... 44 2.0 1
(DC384029) Homo sapiens cDNA, clone PROST2016992, 5' end, mR... 44 2.0 1
(DC383954) Homo sapiens cDNA, clone PROST2015988, 5' end, mR... 44 2.0 1
(DC383936) Homo sapiens cDNA, clone PROST2015810, 5' end, mR... 44 2.0 1
(DC383494) Homo sapiens cDNA, clone PROST2010108, 5' end, mR... 44 2.0 1
(DC383252) Homo sapiens cDNA, clone PROST2006767, 5' end, mR... 44 2.0 1
(DC383128) Homo sapiens cDNA, clone PROST2004847, 5' end, mR... 44 2.0 1
(DC382675) Homo sapiens cDNA, clone PLACE7018105, 5' end, mR... 44 2.0 1
(DC382603) Homo sapiens cDNA, clone PLACE7017330, 5' end, mR... 44 2.0 1
(DC382435) Homo sapiens cDNA, clone PLACE7015148, 5' end, mR... 44 2.0 1
(DC382400) Homo sapiens cDNA, clone PLACE7014507, 5' end, mR... 44 2.0 1
(DC381705) Homo sapiens cDNA, clone PLACE7005756, 5' end, mR... 44 2.0 1
(DC379844) Homo sapiens cDNA, clone PERIC2008703, 5' end, mR... 44 2.0 1
(DC379192) Homo sapiens cDNA, clone PERIC2002915, 5' end, mR... 44 2.0 1
(DC378820) Homo sapiens cDNA, clone PEBLM2008707, 5' end, mR... 44 2.0 1
(DC378724) Homo sapiens cDNA, clone PEBLM2007474, 5' end, mR... 44 2.0 1
(DC378489) Homo sapiens cDNA, clone PEBLM2004605, 5' end, mR... 44 2.0 1
(DC378455) Homo sapiens cDNA, clone PEBLM2004243, 5' end, mR... 44 2.0 1

>(AU271669) Dictyostelium discoideum gamete cDNA clone:FC-IC0522, 3'
end single read.
Length = 215

Score = 424 bits (214), Expect = e-115
Identities = 214/214 (100%)
Strand = Plus / Plus


Query: 1 actgaattagctgaccaagataaaacaaatttaaaatgtgataaaaaattagtagtttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgaattagctgaccaagataaaacaaatttaaaatgtgataaaaaattagtagtttca 60


Query: 61 ctttacatagattcacaaaaagaaaattcagaaacatttaattttcaagttagtgaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctttacatagattcacaaaaagaaaattcagaaacatttaattttcaagttagtgaaatt 120


Query: 121 aaagatgaaaatggtaaattaaaaacattagttataccaatttcagtaaaatttaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaagatgaaaatggtaaattaaaaacattagttataccaatttcagtaaaatttaaaaaa 180


Query: 181 tcagaaacatttataaattatccattagtttatg 214
||||||||||||||||||||||||||||||||||
Sbjct: 181 tcagaaacatttataaattatccattagtttatg 214

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 436,169,884
Number of extensions: 33012237
Number of successful extensions: 10367864
Number of sequences better than 10.0: 1954
Length of query: 214
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 191
Effective length of database: 99,442,330,388
Effective search space: 18993485104108
Effective search space used: 18993485104108
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 7.28
Homology vs Protein
Query= Contig-U03376-1 (Contig-U03376-1Q) /CSM_Contig/Contig-U03376-1Q.Seq.d
(214 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC116979_35(AC116979|pid:none) Dictyostelium discoideum chromoso... 142 3e-33
AB206812_1(AB206812|pid:none) Physarum polycephalum GCS1 mRNA fo... 44 0.002
AC116963_45(AC116963|pid:none) Dictyostelium discoideum chromoso... 39 0.076
AC136522_14(AC136522|pid:none) Oryza sativa (japonica cultivar-g... 34 1.9
AM424065_1(AM424065|pid:none) Vitis vinifera contig VV78X125552.... 33 2.5
CP000881_32(CP000881|pid:none) Hemiselmis andersenii chromosome ... 32 5.5
AE014133_428(AE014133|pid:none) Streptococcus mutans UA159, comp... 32 9.3

>AC116979_35(AC116979|pid:none) Dictyostelium discoideum chromosome
2 map 6445720-6776760 strain AX4, complete sequence.
Length = 572

Score = 142 bits (359), Expect = 3e-33
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = +1

Query: 1 TELADQDKTNLKCDKKLVVSLYIDSQKENSETFNFQVSEIKDENGKLKTLVIPISVKFKK 180
TELADQDKTNLKCDKKLVVSLYIDSQKENSETFNFQVSEIKDENGKLKTLVIPISVKFKK
Sbjct: 38 TELADQDKTNLKCDKKLVVSLYIDSQKENSETFNFQVSEIKDENGKLKTLVIPISVKFKK 97

Query: 181 SETFINYPLVY 213
SETFINYPLVY
Sbjct: 98 SETFINYPLVY 108

Lambda K H
0.312 0.131 0.351

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 191,479,801
Number of extensions: 2472432
Number of successful extensions: 7467
Number of sequences better than 10.0: 7
Number of HSP's gapped: 7462
Number of HSP's successfully gapped: 7
Length of query: 71
Length of database: 1,061,185,681
Length adjustment: 42
Effective length of query: 29
Effective length of database: 923,910,865
Effective search space: 26793415085
Effective search space used: 26793415085
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 27 (15.0 bits)

PSORT

psg: 0.75 gvh: 0.27 alm: 0.50 top: 0.53 tms: 0.00 mit: 0.21 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: nuclear
32.0 %: cytoplasmic
12.0 %: cytoskeletal
8.0 %: mitochondrial
4.0 %: vacuolar

>> prediction for Contig-U03376-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 1