Contig-U16571-1
Contig ID Contig-U16571-1
Contig update 2004. 6.11
Contig sequence
>Contig-U16571-1 (Contig-U16571-1Q) /CSM_Contig/Contig-U16571-1Q.Seq.d
TATGGGGAGAATTGGTCAGATATCATTCCACTTATTGAATTTGCAATGAA
CTCATCAATGAGCAAGTCTACAAAGATGTCACCATTCCAAATCGTTTATG
GATTCCAATCCACCAACTCCCGTTAATCATTTCAATTCATTAACAAAGAC
TCGTATACCAATGAGCAACATCAAAAAAGATTGTCCGGTGATAATATACT
AGATGCTCAAATCAATGCTCAAAAGTATTACAACCGAGGGTCGTGGTGAT
GTTATCTTCGTAGTCGGAGAAAAAGGTGATGGTTAAAAGAAAATTCTTCC
AAACTAATCTTTCAAAAGATCTAATCTCTCACAAACTTGAATCCAAGAAT
TGTGGACCATTCATAATCACTGCCGTTCATGGTAATAATGTAACACTCGA
GTTTAGTAGGTTATCCAAAGAAACACAATGTGTTCAACAAGGATCAAATC
GTAAAACTATACGAGGACAGTGAGTGGTTAAGAGAAGAGATATCGATGCC
CGAACCTGAGGAGATGGACGAAGCAAGTTACGAAGTTGAAAGTATTCTCA
ATCACGATAAAGTCAAAAAGATGTACCTAGTGAAGTTCAAAGGTTACCCA
GAACCTGAATGGATCAAAGAAGTCGATACAGACTGTGAAGAGTTAGTCAG
AGAGTATTGGAATAACGTGCAGAAGAAACAATTGAATCTCAAGAAGAGAA
AGAGAGAATGTAACTACAGAAGCCGTTGAGCCAATTGTGTCACCTCCACT
CTTCCCAAGAAGTTCAAAGTTCTCAAACATTGCAACCAATTACTCCAAGA
CAACAAAACTCCATCTCAAATCAAAGAAACCAATCAAAGAAAAGAAAATC
AAGAAATCAAAATACTTCAAGTGAGGATGATGAACTTGATCTTAGTTTAC
AAATTAAAACAACTAGATCAGGAAGAAAAGTTACACCCAAGAGTTTATAG
TCCACCTCTGAGCCATAGCTAGCCTAAAGAAGGAAGGGGAAGGTGTTAGA
GACTCAAAACTAAATTAATTTAAAGTTAGTATGAGCTCAACAACGTAACA
AATTCGCGCATCTCCATGTAAAAATATTTCATTTAATTTTTATTTTTATT
TTTTAATTTTTTAATTTTTTATTTTTTTCAGTCAAAAAAATAAAAAATTA
AATTAAAAAAAATTAAATTAAATTAAAATTTAAAAAAAATAATAAAAATT
CTGATTTTTCGGTTTAGTTGGAATAAC----------ATCATAATAAAGA
AAGATCAAGATGTTGAACCAACAAAGAAACAAATCTATTATTCAACAGAT
GATCATAAGAGACATGTCGAAGAAATGGTTATCAAATTTATAGATTTAGG
TATTATCAAAAGATCAGAATCAAATTACTCATCTCCAATCATGTTATTAA
AGAAGAGAGATTCATGGCGTGTAGTCCACGACTATCGTCAACTAAATAAA
GTCACTGTTAGAGACGATCATCCATTCACTCCGGTTGATAGTCTTTTAAA
TCAATGTAAAGATTCAAAGCTTTTCTCAAAGTTTGACATGATTATGGGTT
ATTTCCAAGTGTTAATTAATCCAGAACACGCAAAGTACACCGCTTTCATT
ACACATATTGGTAAATTTGAATATACTAGAATGCCACAAGGTTTAGTCAA
CTCTCCATCCACATTCGCCAGATTGATGGTCGAAATATTTGGAAAAATCA
AAAGTTTATTACAATACTTTGATGATCTTTTGGTTCATTCAAAACTCGAC
TACATGGTACATTTCATTGAAATAATTAGAATGCTTCTATATTGTAGAAA
GTACCTATTATTCATTTCAAGAGAAAAGAGTGAAATGTTAAAGACTGAAG
TAGATTTCCTTGGTTTCCACATTCATAAAGATGGTATATCTCCAAGAGCT
GCAAAGGTTAGAGCTATCTCTGAGTTACCTGAACCAAGAAACGCCAAAGA
AGCTGAAGCTGCATTAGGTCTTTTTGGATTCTTCAGGAGACACATTGAAA
ATTACGCTGAAAAAACCTATCACCTTTCCAAAGAATCAAAAGGAAAAAAC
AAGAAAACACTTTCTGATGAATCACTCAAAGAATTCAATAATCTAAAGAA
AGAGTTTGAAGGTGAAAATATTGTCGCTATTCCAATTGAACAAGATAACT
CCATACCAATAGATATCGAAAAGGTTAAAGCATCAACAGACATGCCAATC
CATTCAGATAATAATAATCTAAACAATGGTAGTTTTCACTTGTATTGTGA
TGTTAGTGATAAAGCATTATCAGGTGTATTATATCAAATTCAAGGTAATA
AATTCAAAGTCATTTGGTTTCATAGTAGAAAACTTACTGATACTCAAAAG
AGGTACAGCATAGGTGATAGAGAGTTCCTTTCAATCATTGATTCTCTAAA
GAAGTTTCAACATTTATTAATTGGTAAAAAGGTTTCAATCTACACTGATC
ACCAAAATCTTACATATATTATCAATAAGTCAAACGATAAACCGTTCACA
AAGAGACAAGATAATTATATGAAATATATTAAAGAATTTGATTATGAATT
AAGACATATAAGTGGTAAAAAGAATGGTATAGCTGATTTCTTATCTCGTA
AATATGATAATTTCCAATGGGATGAATCGTTTTTAAATAAAATTAAGGAA
GAACAAATCAATTCTCAATGGCTATTAGAGATGAAAAAGAATCCAAATTT
ATGCATTGAAGAAATTAATGATATCTGTTACCTTAGTGAAGATGGGTTCA
AGAAATTAATCATCATAGATAAAGAAACTATTCATACCGTCATTAGAGAA
TATCACGATACCAAATATAGTGGTCATCACGCTTTAGATATCACATACAA
TAATATAAGACAAGATTACTATTTCAAAGAAATGTTTTCTATTATCAAGA
GGTACATAAAGTCTTGTGCAACATGTCAATTGAACATTAACCGTAAAGAT
AATGGTATACTCCAAAGTTTAGAAATTCCCTTTGAAGTTTGGAGAGATAT
ATCAATCGATTTCTTATCGCTACCAAAAACAATGTATGCAATAAACGGAT
TTACAGTTGAAGTCGATCAAGTTTGTGTCATTGTTTGTAGATTATCTAAA
ATGGTTCATATAGTTCCATGTCATAAGACAATAGATGCCCAACATACTGC
TCAATTATTGTTGAATCATGTGTTCAGACTCCATGGTTATCCAAGAACAA
TCGTCTCCGATAGAGATCCAAGATTCCTTTCAGAAATATGGGAGAGATGG
GCAAAGACGATGGATTCTAAACTCAAGATGACTGTGGCACACAGAGCACA
AGCTGATGGTCAAACTGAAAGAATGAATAGAGAAATTATTAGAATATTAA
CTAAAGCCTCAACAGAGTATGGGGAGAATTGGTCAGATATCATTCCCACT
TATTGAATTTGCAATGAACTCATCAATGAGCAAGTCTACAAAGATGTCAC
CATTCCCAAATCGTATATGGATTCAATCCACCAACTCCCGTTAATCATTT
CAATTCATTAACAAAGACTCGTATACCAATGAGCAACATCAAAAAGATTG
TCCGTGATAATATACTAGATGCTCAAATCAATGCTCAAAAGTATTACAAC
CGAGGTCGTGGTGATGTTATCTTCGTAGTCGGAGAAAAGGTGATGGTTAA
AAGAAAATTCTTCCAAACTAATCTTTCAAAAGATCTAATCTCTCACAAAC
TTGAATCCAAGAATTGTGGACCATTCATAATCACTGCCGTTCATGGTAAT
AATGTAACACTCGATTTAGTAGGTTATCCAAAGAAACACAATGTGTTCAA
CAAGGATCAAATCGTAAAACTATACGAGGACAGTGAGTGGTTAAGAGAAG
AGATATCGATGCCCGAACCTGAGGAGATGGACGAAGCAAGTTACGAAGTT
GAAAGTATTCTCAATCACGATAAAGTCAAAAAGATGTACCTAGTGAAGTT
CAAAGGTTACCCAGAACCTGAATGGATCAAAGAAGTCGATACAGACTGTG
AAGAGTTAGTCAGAGAGTATTGGAATAACGTGCAGAAGAAACAATTGAAC
TCAAGAAGAGAAAGAGAGAATGTAACTACAGAAGCCGTTGAGCCAATTGT
GTCACCTCCACTCTCCCAAGAAGTTCAAAGTTCTCAAACATTGCAACCAA
TTACTCCAAGACAACAAAACTCCATCTCAAATCAAAGAAACCAATCAAAG
AAAAGAAAATCAAGAAATCAAAATACTTCAAGTGAGGATGATGAACTTGA
TCTTAGTTTACAAATTAAAACAACTAGATCAGGAAGAAAAGTTACACCCA
AGAGTTTATAGTCCACCTCTGAGCCATAGCTAGCCTAAAGAAGGAAGGGG
AAGGTGTTAGAGACTCAAAACTAAATTAATTTAAAGTTAGTATGAGCTCA
ACAACGTAACAAATTCGCGCATCTCCATGTAAAAATATTTCATTTAATTT
TTATTTTTATTTTTTAATTTTTTATTTTTTCAGTCAAAAAAATAAAAAAT
TAAATTAAAAAAAATTAAATTAAATTAAAATTTAAAAAAAATAATAAAAA
TTCTGATTTTCGGTTTAGTTTCATAACGCCCTTACTTTTAAAAAAAAAA

Gap gap included
Contig length 4589
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 1130
End point 1368
Strand (PLUS/MINUS) PLUS
Number of clones 43
Number of EST 79
Link to clone list U16571
List of clone(s)

est1=SHC842Z,1,796
est2=SHA658Z,90,827
est3=CFG815Z,92,829
est4=CHD524Z,99,764
est5=CHQ302Z,166,809
est6=CHF305Z,239,830
est7=CHS368Z,413,1192
est8=SHG481Z,483,1227
est9=SHE552Z,553,1225
est10=AHA263F,1228,1854
est11=AHF244F,1261,1883
est12=AHA839F,1263,1882
est13=CHF305F,1272,1870
est14=AFJ106F,1277,1907
est15=AFJ206F,1277,1891
est16=SHA658F,1282,1894
est17=VHK722F,1305,1896
est18=AHK272F,1321,1893
est19=AHK466F,1323,1893
est20=CHQ302F,1337,1807
est21=AHL678F,1351,1921
est22=CHS368F,1385,2023
est23=AHM541F,1413,2018
est24=AHP375F,1414,1834
est25=VHK230F,1435,2021
est26=AHI385F,1436,2018
est27=VHI225F,1486,1704
est28=VHJ256F,1494,2045
est29=CHC783Z,1524,1814
est30=AHD676F,1568,2225
est31=SHE552F,1575,2109
est32=AHM774F,1611,2226
est33=VHE256F,1611,2233
est34=VHJ583F,1649,2193
est35=SHI786F,1765,2356
est36=AHE636F,1771,2353
est37=VHE463F,1804,2461
est38=SHC842F,1809,2416
est39=VHJ274F,1823,2331
est40=SHG481F,1828,2462
est41=AFJ206Z,1927,2563
est42=AFJ106Z,1937,2563
est43=CFG815F,2374,3034
est44=VFC501F,2401,2967
est45=VFC503F,2401,2813
est46=CHD524F,2755,3368
est47=SHE845F,2767,2933
est48=AFC284F,2769,3309
est49=AFL417F,3117,3714
est50=AHA263Z,3372,4180
est51=VFA550F,3388,3911
est52=AHC690Z,3397,4182
est53=AHD676Z,3409,4165
est54=AHM541Z,3409,4182
est55=AHF244Z,3410,4182
est56=VHK230Z,3410,4184
est57=VHJ274Z,3451,4162
est58=AHI385Z,3453,4180
est59=AHE636Z,3455,4182
est60=AHK466Z,3455,4161
est61=AHL678Z,3455,4180
est62=VHI225Z,3461,4183
est63=VHJ256Z,3471,4183
est64=AFC284Z,3552,4179
est65=VHE256Z,3553,4184
est66=VHK722Z,3594,4183
est67=AHP375Z,3617,4183
est68=AHP820Z,3617,4182
est69=VFC501Z,3618,4181
est70=VSH120E,3758,4550
est71=AHA839Z,3819,4570
est72=AHK272Z,3843,4570
est73=AFL417Z,3844,4550
est74=AHM774Z,3866,4570
est75=VHE463Z,3906,4558
est76=VHJ583Z,3910,4572
est77=VFA550Z,3914,4550
est78=VSI147F,4032,4589
est79=VSI147Z,4047,4538
Translated Amino Acid sequence
ygenwsdiipliefamnssmskstkmspfqivygfqstnsr*sfqfinkdsytneqhqkr
lsgdnildaqinaqkyynrgsw*cylrsrrkr*wlkenssklifqki*sltnlnprivdh
s*slpfmvim*hsslvgypkkhnvfnkdqivklyedsewlreeismpepeemdeasyeve
silnhdkvkkmylvkfkgypepewikevdtdceelvreywnnvqkkqlnlkkrkrecnyr
sr*ancvtstlpkkfkvlkhcnqllqdnktpsqiketnqrkenqeikilqvrmmnlilvy
klkqldqeeklhprvyspplshs*pkegrgrc*rlktkli*s*yelnnvtnsrism*kyf
i*flflffnflifyffqskk*kiklkkikln*NLKKIIKILIFRFSWNN---

---IIIKKDQDVEPTKKQIYYSTDDHKRHVEEMVIKFIDLGIIKRSESNYSSPIMLLKKR
DSWRVVHDYRQLNKVTVRDDHPFTPVDSLLNQCKDSKLFSKFDMIMGYFQVLINPEHAKY
TAFITHIGKFEYTRMPQGLVNSPSTFARLMVEIFGKIKSLLQYFDDLLVHSKLDYMVHFI
EIIRMLLYCRKYLLFISREKSEMLKTEVDFLGFHIHKDGISPRAAKVRAISELPEPRNAK
EAEAALGLFGFFRRHIENYAEKTYHLSKESKGKNKKTLSDESLKEFNNLKKEFEGENIVA
IPIEQDNSIPIDIEKVKASTDMPIHSDNNNLNNGSFHLYCDVSDKALSGVLYQIQGNKFK
VIWFHSRKLTDTQKRYSIGDREFLSIIDSLKKFQHLLIGKKVSIYTDHQNLTYIINKSND
KPFTKRQDNYMKYIKEFDYELRHISGKKNGIADFLSRKYDNFQWDESFLNKIKEEQINSQ
WLLEMKKNPNLCIEEINDICYLSEDGFKKLIIIDKETIHTVIREYHDTKYSGHHALDITY
NNIRQDYYFKEMFSIIKRYIKSCATCQLNINRKDNGILQSLEIPFEVWRDISIDFLSLPK
TMYAINGFTVEVDQVCVIVCRLSKMVHIVPCHKTIDAQHTAQLLLNHVFRLHGYPRTIVS
DRDPRFLSEIWERWAKTMDSKLKMTVAHRAQADGQTERMNREIIRILTKASTEYGENWSD
IIPTY*icnelineqvykdvtipksymdsihqlpliisih*qrlvyq*atskrlsviiy*
mlksmlksittevvvmlss*sekr*wlkenssklifqki*sltnlnprivdhs*slpfmv
im*hsi**viqrntmcstriks*nytrtvsg*ekryrcpnlrrwtkqvtklkvfsitiks
krct**sskvtqnlngskksiqtvks*sesigitcrrnn*tqeekerm*lqkplsqlchl
hspkkfkvlkhcnqllqdnktpsqiketnqrkenqeikilqvrmmnlilvyklkqldqee
klhprvyspplshs*pkegrgrc*rlktkli*s*yelnnvtnsrism*kyfi*flflffn
flffqskk*kiklkkikln*nlkkiikilifglvs*rpyf*kk


Translated Amino Acid sequence (All Frames)
Frame A:
ygenwsdiipliefamnssmskstkmspfqivygfqstnsr*sfqfinkdsytneqhqkr
lsgdnildaqinaqkyynrgsw*cylrsrrkr*wlkenssklifqki*sltnlnprivdh
s*slpfmvim*hsslvgypkkhnvfnkdqivklyedsewlreeismpepeemdeasyeve
silnhdkvkkmylvkfkgypepewikevdtdceelvreywnnvqkkqlnlkkrkrecnyr
sr*ancvtstlpkkfkvlkhcnqllqdnktpsqiketnqrkenqeikilqvrmmnlilvy
klkqldqeeklhprvyspplshs*pkegrgrc*rlktkli*s*yelnnvtnsrism*kyf
i*flflffnflifyffqskk*kiklkkikln*NLKKIIKILIFRFSWNN---

---IIIKKDQDVEPTKKQIYYSTDDHKRHVEEMVIKFIDLGIIKRSESNYSSPIMLLKKR
DSWRVVHDYRQLNKVTVRDDHPFTPVDSLLNQCKDSKLFSKFDMIMGYFQVLINPEHAKY
TAFITHIGKFEYTRMPQGLVNSPSTFARLMVEIFGKIKSLLQYFDDLLVHSKLDYMVHFI
EIIRMLLYCRKYLLFISREKSEMLKTEVDFLGFHIHKDGISPRAAKVRAISELPEPRNAK
EAEAALGLFGFFRRHIENYAEKTYHLSKESKGKNKKTLSDESLKEFNNLKKEFEGENIVA
IPIEQDNSIPIDIEKVKASTDMPIHSDNNNLNNGSFHLYCDVSDKALSGVLYQIQGNKFK
VIWFHSRKLTDTQKRYSIGDREFLSIIDSLKKFQHLLIGKKVSIYTDHQNLTYIINKSND
KPFTKRQDNYMKYIKEFDYELRHISGKKNGIADFLSRKYDNFQWDESFLNKIKEEQINSQ
WLLEMKKNPNLCIEEINDICYLSEDGFKKLIIIDKETIHTVIREYHDTKYSGHHALDITY
NNIRQDYYFKEMFSIIKRYIKSCATCQLNINRKDNGILQSLEIPFEVWRDISIDFLSLPK
TMYAINGFTVEVDQVCVIVCRLSKMVHIVPCHKTIDAQHTAQLLLNHVFRLHGYPRTIVS
DRDPRFLSEIWERWAKTMDSKLKMTVAHRAQADGQTERMNREIIRILTKASTEYGENWSD
IIPTY*icnelineqvykdvtipksymdsihqlpliisih*qrlvyq*atskrlsviiy*
mlksmlksittevvvmlss*sekr*wlkenssklifqki*sltnlnprivdhs*slpfmv
im*hsi**viqrntmcstriks*nytrtvsg*ekryrcpnlrrwtkqvtklkvfsitiks
krct**sskvtqnlngskksiqtvks*sesigitcrrnn*tqeekerm*lqkplsqlchl
hspkkfkvlkhcnqllqdnktpsqiketnqrkenqeikilqvrmmnlilvyklkqldqee
klhprvyspplshs*pkegrgrc*rlktkli*s*yelnnvtnsrism*kyfi*flflffn
flffqskk*kiklkkikln*nlkkiikilifglvs*rpyf*kk

Frame B:
mgrigqisfhllnlq*thq*aslqrchhsksfmdsnpptpvnhfnsltktripmsnikkd
cpviiy*mlksmlksittegrgdvifvvgekgdg*kkilpn*sfkrsnlsqt*iqelwti
hnhcrsw**cntrv**viqrntmcstriks*nytrtvsg*ekryrcpnlrrwtkqvtklk
vfsitikskrct**sskvtqnlngskksiqtvks*sesigitcrrnn*isrrerenvtte
avepivspplfprsskfsniatnyskttklhlkskkpikekkikkskyfk*g**t*s*ft
n*nn*irkksytqefivhl*aiaslkkegegvrdskln*fkvsmsstt*qiraspcknis
fnfyfyflif*ffiffsqknkkln*kkln*iki*kk**kf*ffglvgi---

---s**rkikmlnqqrnksiiqqmiirdmskkwlsnl*i*vlskdqnqithlqscy*rre
ihgv*sttivn*ikslletiihslrlivf*invkiqsfsqslt*lwviskc*liqntqst
plslhilvnlnilechkv*stlhphspd*wskylekskvyyntlmifwfiqnsttwyisl
k*lecfyivestyysfqekrvkc*rlk*islvstfikmvylqelqrlelslsylnqetpk
klklh*vfldssgdtlkitlkkpitfpknqkektrkhflmnhsknsii*rkslkvkilsl
fqlnkitpyq*iskrlkhqqtcqsiqiiii*tmvvftcivmlvikhyqvyyikfkvinsk
sfgfivenllilkrgta*viessfqslil*rsfniy*lvkrfqstlitkilhilsisqti
nrsqrdkiii*nilknlimn*di*vvkrmv*lisylvnmiisngmnrf*iklrknksiln
gy*r*kriqiyalkklmisvtlvkmgsrn*ss*ikklfipslenitipnivvitl*isht
ii*dkitiskkcfllsrgt*slvqhvn*tltvkimvyskv*kfplkfgeiyqsisyryqk
qcmq*tdlqlksikfvslfvdylkwfi*fhvirq*mpnillnyc*imcsdsmviqeqssp
ieiqdsfqkygrdgqrrwilnsr*lwhtehklmvklke*ieklley*lkpqqsmgrigqi
sfpliefamnssmskstkmspfpnriwiqstnsr*sfqfinkdsytneqhqkdcp**ytr
csnqcskvlqprsw*cylrsrrkgdg*kkilpn*sfkrsnlsqt*iqelwtihnhcrsw*
*cntrfsrlsketqcvqqgsnrktirgq*vvkrrdidart*gdgrsklrs*kysqsr*sq
kdvpsevqrlprt*mdqrsryrl*rvsqrvle*raeetielkkrkrecnyrsr*ancvts
tlprsskfsniatnyskttklhlkskkpikekkikkskyfk*g**t*s*ftn*nn*irkk
sytqefivhl*aiaslkkegegvrdskln*fkvsmsstt*qiraspcknisfnfyfyfli
fyffsqknkkln*kkln*iki*kk**kf*fsv*fhnaltfkkk

Frame C:
wgelvryhsty*icnelineqvykdvtipnrlwipihqlpliisih*qrlvyq*atskki
vr**ytrcsnqcskvlqprvvvmlss*sekkvmvkrkffqtnlskdlishkleskncgpf
iitavhgnnvtlefsrlsketqcvqqgsnrktirgq*vvkrrdidart*gdgrsklrs*k
ysqsr*sqkdvpsevqrlprt*mdqrsryrl*rvsqrvle*raeetiesqeekerm*lqk
plsqlchlhssqevqssqtlqpitprqqnsisnqrnqskkrksrnqntsseddeldlslq
ikttrsgrkvtpksl*stsep*la*rrkgkvletqn*inlklv*aqqrnkfahlhvkifh
lififif*ffnflffsvkkikn*ikkn*iklkfkknnknsdfsv*le*---

---hnkersrc*tnketnllfnr*s*etcrrngyqiyrfryyqkirikllisnhvikeer
fmacsprlsstk*shc*rrssihsg**sfksm*rfkaflkv*hdyglfpsvn*srtrkvh
rfhytyw*i*iy*natrfsqlsihirqidgrniwknqkfitil**sfgsfktrlhgtfh*
nn*nasil*kvpiihfkrke*nvkd*srfpwfphs*rwyisksckg*syl*vt*tkkrqr
s*scirsfwilqeth*klr*knlspfqrikrkkqentf**itqriq*skerv*r*kycry
sn*tr*lhtnryrkg*sinrhanpfr***skqw*fslvl*c***siirciisnsr**iqs
hlvs**kty*yskevqhr**rvpfnh*fskevstfinw*kgfnlh*spksyiyyq*vkr*
tvhketr*lyeiy*ri*l*iktykw*kewys*flis*i**fpmg*ivfk*n*grtnqfsm
airdekeskfmh*rn**yllp**rwvqeinhhr*rnysyrh*risryqi*wssrfryhiq
*yktrllfqrnvfyyqevhkvlcnmsieh*p*r*wytpkfrnsl*sleryinrfliatkn
nvcnkriys*srsslchcl*ii*ngsyssms*dnrcptycsiivescvqtpwlsknnrlr
*rskipfrnmgemgkddgf*tqddcgtqsts*wsn*kne*rny*nin*slnrvwgelvry
hshllnlq*thq*aslqrchhsqivygfnpptpvnhfnsltktripmsnikkivrdnild
aqinaqkyynrgrgdvifvvgekvmvkrkffqtnlskdlishkleskncgpfiitavhgn
nvtldlvgypkkhnvfnkdqivklyedsewlreeismpepeemdeasyevesilnhdkvk
kmylvkfkgypepewikevdtdceelvreywnnvqkkqlnsrrerenvtteavepivspp
lsqevqssqtlqpitprqqnsisnqrnqskkrksrnqntsseddeldlslqikttrsgrk
vtpksl*stsep*la*rrkgkvletqn*inlklv*aqqrnkfahlhvkifhlififif*f
fifsvkkikn*ikkn*iklkfkknnknsdfrfsfitplllkkk

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U16571-1 (Contig-U16571-1Q)
/CSM_Contig/Contig-U16571-1Q.Seq.d
(4599 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U16571-1 (Contig-U16571-1Q) /CSM_Contig/Conti... 5812 0.0
Contig-U16569-1 (Contig-U16569-1Q) /CSM_Contig/Conti... 2113 0.0
Contig-U16568-1 (Contig-U16568-1Q) /CSM_Contig/Conti... 289 2e-77
Contig-U13513-1 (Contig-U13513-1Q) /CSM_Contig/Conti... 174 8e-43
Contig-U16178-1 (Contig-U16178-1Q) /CSM_Contig/Conti... 38 0.12
Contig-U15592-1 (Contig-U15592-1Q) /CSM_Contig/Conti... 38 0.12
Contig-U14342-1 (Contig-U14342-1Q) /CSM_Contig/Conti... 38 0.12
Contig-U13585-1 (Contig-U13585-1Q) /CSM_Contig/Conti... 38 0.12
Contig-U11429-1 (Contig-U11429-1Q) /CSM_Contig/Conti... 38 0.12
Contig-U16535-1 (Contig-U16535-1Q) /CSM_Contig/Conti... 36 0.47

>Contig-U16571-1 (Contig-U16571-1Q) /CSM_Contig/Contig-U16571-1Q.Seq.d
Length = 4599

Score = 5812 bits (2932), Expect = 0.0
Identities = 2962/2962 (100%)
Strand = Plus / Plus


Query: 1199 ttctgatttttcggtttagttggaataacnnnnnnnnnnatcataataaagaaagatcaa 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 ttctgatttttcggtttagttggaataacnnnnnnnnnnatcataataaagaaagatcaa 1258


Query: 1259 gatgttgaaccaacaaagaaacaaatctattattcaacagatgatcataagagacatgtc 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 gatgttgaaccaacaaagaaacaaatctattattcaacagatgatcataagagacatgtc 1318


Query: 1319 gaagaaatggttatcaaatttatagatttaggtattatcaaaagatcagaatcaaattac 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1319 gaagaaatggttatcaaatttatagatttaggtattatcaaaagatcagaatcaaattac 1378


Query: 1379 tcatctccaatcatgttattaaagaagagagattcatggcgtgtagtccacgactatcgt 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1379 tcatctccaatcatgttattaaagaagagagattcatggcgtgtagtccacgactatcgt 1438


Query: 1439 caactaaataaagtcactgttagagacgatcatccattcactccggttgatagtctttta 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1439 caactaaataaagtcactgttagagacgatcatccattcactccggttgatagtctttta 1498


Query: 1499 aatcaatgtaaagattcaaagcttttctcaaagtttgacatgattatgggttatttccaa 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1499 aatcaatgtaaagattcaaagcttttctcaaagtttgacatgattatgggttatttccaa 1558


Query: 1559 gtgttaattaatccagaacacgcaaagtacaccgctttcattacacatattggtaaattt 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1559 gtgttaattaatccagaacacgcaaagtacaccgctttcattacacatattggtaaattt 1618


Query: 1619 gaatatactagaatgccacaaggtttagtcaactctccatccacattcgccagattgatg 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1619 gaatatactagaatgccacaaggtttagtcaactctccatccacattcgccagattgatg 1678


Query: 1679 gtcgaaatatttggaaaaatcaaaagtttattacaatactttgatgatcttttggttcat 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1679 gtcgaaatatttggaaaaatcaaaagtttattacaatactttgatgatcttttggttcat 1738


Query: 1739 tcaaaactcgactacatggtacatttcattgaaataattagaatgcttctatattgtaga 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1739 tcaaaactcgactacatggtacatttcattgaaataattagaatgcttctatattgtaga 1798


Query: 1799 aagtacctattattcatttcaagagaaaagagtgaaatgttaaagactgaagtagatttc 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1799 aagtacctattattcatttcaagagaaaagagtgaaatgttaaagactgaagtagatttc 1858


Query: 1859 cttggtttccacattcataaagatggtatatctccaagagctgcaaaggttagagctatc 1918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1859 cttggtttccacattcataaagatggtatatctccaagagctgcaaaggttagagctatc 1918


Query: 1919 tctgagttacctgaaccaagaaacgccaaagaagctgaagctgcattaggtctttttgga 1978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1919 tctgagttacctgaaccaagaaacgccaaagaagctgaagctgcattaggtctttttgga 1978


Query: 1979 ttcttcaggagacacattgaaaattacgctgaaaaaacctatcacctttccaaagaatca 2038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1979 ttcttcaggagacacattgaaaattacgctgaaaaaacctatcacctttccaaagaatca 2038


Query: 2039 aaaggaaaaaacaagaaaacactttctgatgaatcactcaaagaattcaataatctaaag 2098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2039 aaaggaaaaaacaagaaaacactttctgatgaatcactcaaagaattcaataatctaaag 2098


Query: 2099 aaagagtttgaaggtgaaaatattgtcgctattccaattgaacaagataactccatacca 2158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2099 aaagagtttgaaggtgaaaatattgtcgctattccaattgaacaagataactccatacca 2158


Query: 2159 atagatatcgaaaaggttaaagcatcaacagacatgccaatccattcagataataataat 2218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2159 atagatatcgaaaaggttaaagcatcaacagacatgccaatccattcagataataataat 2218


Query: 2219 ctaaacaatggtagttttcacttgtattgtgatgttagtgataaagcattatcaggtgta 2278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2219 ctaaacaatggtagttttcacttgtattgtgatgttagtgataaagcattatcaggtgta 2278


Query: 2279 ttatatcaaattcaaggtaataaattcaaagtcatttggtttcatagtagaaaacttact 2338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2279 ttatatcaaattcaaggtaataaattcaaagtcatttggtttcatagtagaaaacttact 2338


Query: 2339 gatactcaaaagaggtacagcataggtgatagagagttcctttcaatcattgattctcta 2398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2339 gatactcaaaagaggtacagcataggtgatagagagttcctttcaatcattgattctcta 2398


Query: 2399 aagaagtttcaacatttattaattggtaaaaaggtttcaatctacactgatcaccaaaat 2458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2399 aagaagtttcaacatttattaattggtaaaaaggtttcaatctacactgatcaccaaaat 2458


Query: 2459 cttacatatattatcaataagtcaaacgataaaccgttcacaaagagacaagataattat 2518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2459 cttacatatattatcaataagtcaaacgataaaccgttcacaaagagacaagataattat 2518


Query: 2519 atgaaatatattaaagaatttgattatgaattaagacatataagtggtaaaaagaatggt 2578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2519 atgaaatatattaaagaatttgattatgaattaagacatataagtggtaaaaagaatggt 2578


Query: 2579 atagctgatttcttatctcgtaaatatgataatttccaatgggatgaatcgtttttaaat 2638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2579 atagctgatttcttatctcgtaaatatgataatttccaatgggatgaatcgtttttaaat 2638


Query: 2639 aaaattaaggaagaacaaatcaattctcaatggctattagagatgaaaaagaatccaaat 2698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2639 aaaattaaggaagaacaaatcaattctcaatggctattagagatgaaaaagaatccaaat 2698


Query: 2699 ttatgcattgaagaaattaatgatatctgttaccttagtgaagatgggttcaagaaatta 2758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2699 ttatgcattgaagaaattaatgatatctgttaccttagtgaagatgggttcaagaaatta 2758


Query: 2759 atcatcatagataaagaaactattcataccgtcattagagaatatcacgataccaaatat 2818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2759 atcatcatagataaagaaactattcataccgtcattagagaatatcacgataccaaatat 2818


Query: 2819 agtggtcatcacgctttagatatcacatacaataatataagacaagattactatttcaaa 2878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2819 agtggtcatcacgctttagatatcacatacaataatataagacaagattactatttcaaa 2878


Query: 2879 gaaatgttttctattatcaagaggtacataaagtcttgtgcaacatgtcaattgaacatt 2938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2879 gaaatgttttctattatcaagaggtacataaagtcttgtgcaacatgtcaattgaacatt 2938


Query: 2939 aaccgtaaagataatggtatactccaaagtttagaaattccctttgaagtttggagagat 2998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2939 aaccgtaaagataatggtatactccaaagtttagaaattccctttgaagtttggagagat 2998


Query: 2999 atatcaatcgatttcttatcgctaccaaaaacaatgtatgcaataaacggatttacagtt 3058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2999 atatcaatcgatttcttatcgctaccaaaaacaatgtatgcaataaacggatttacagtt 3058


Query: 3059 gaagtcgatcaagtttgtgtcattgtttgtagattatctaaaatggttcatatagttcca 3118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3059 gaagtcgatcaagtttgtgtcattgtttgtagattatctaaaatggttcatatagttcca 3118


Query: 3119 tgtcataagacaatagatgcccaacatactgctcaattattgttgaatcatgtgttcaga 3178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3119 tgtcataagacaatagatgcccaacatactgctcaattattgttgaatcatgtgttcaga 3178


Query: 3179 ctccatggttatccaagaacaatcgtctccgatagagatccaagattcctttcagaaata 3238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3179 ctccatggttatccaagaacaatcgtctccgatagagatccaagattcctttcagaaata 3238


Query: 3239 tgggagagatgggcaaagacgatggattctaaactcaagatgactgtggcacacagagca 3298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3239 tgggagagatgggcaaagacgatggattctaaactcaagatgactgtggcacacagagca 3298


Query: 3299 caagctgatggtcaaactgaaagaatgaatagagaaattattagaatattaactaaagcc 3358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3299 caagctgatggtcaaactgaaagaatgaatagagaaattattagaatattaactaaagcc 3358


Query: 3359 tcaacagagtatggggagaattggtcagatatcattcccacttattgaatttgcaatgaa 3418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3359 tcaacagagtatggggagaattggtcagatatcattcccacttattgaatttgcaatgaa 3418


Query: 3419 ctcatcaatgagcaagtctacaaagatgtcaccattcccaaatcgtatatggattcaatc 3478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3419 ctcatcaatgagcaagtctacaaagatgtcaccattcccaaatcgtatatggattcaatc 3478


Query: 3479 caccaactcccgttaatcatttcaattcattaacaaagactcgtataccaatgagcaaca 3538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3479 caccaactcccgttaatcatttcaattcattaacaaagactcgtataccaatgagcaaca 3538


Query: 3539 tcaaaaagattgtccgtgataatatactagatgctcaaatcaatgctcaaaagtattaca 3598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3539 tcaaaaagattgtccgtgataatatactagatgctcaaatcaatgctcaaaagtattaca 3598


Query: 3599 accgaggtcgtggtgatgttatcttcgtagtcggagaaaaggtgatggttaaaagaaaat 3658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3599 accgaggtcgtggtgatgttatcttcgtagtcggagaaaaggtgatggttaaaagaaaat 3658


Query: 3659 tcttccaaactaatctttcaaaagatctaatctctcacaaacttgaatccaagaattgtg 3718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3659 tcttccaaactaatctttcaaaagatctaatctctcacaaacttgaatccaagaattgtg 3718


Query: 3719 gaccattcataatcactgccgttcatggtaataatgtaacactcgatttagtaggttatc 3778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3719 gaccattcataatcactgccgttcatggtaataatgtaacactcgatttagtaggttatc 3778


Query: 3779 caaagaaacacaatgtgttcaacaaggatcaaatcgtaaaactatacgaggacagtgagt 3838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3779 caaagaaacacaatgtgttcaacaaggatcaaatcgtaaaactatacgaggacagtgagt 3838


Query: 3839 ggttaagagaagagatatcgatgcccgaacctgaggagatggacgaagcaagttacgaag 3898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3839 ggttaagagaagagatatcgatgcccgaacctgaggagatggacgaagcaagttacgaag 3898


Query: 3899 ttgaaagtattctcaatcacgataaagtcaaaaagatgtacctagtgaagttcaaaggtt 3958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3899 ttgaaagtattctcaatcacgataaagtcaaaaagatgtacctagtgaagttcaaaggtt 3958


Query: 3959 acccagaacctgaatggatcaaagaagtcgatacagactgtgaagagttagtcagagagt 4018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3959 acccagaacctgaatggatcaaagaagtcgatacagactgtgaagagttagtcagagagt 4018


Query: 4019 attggaataacgtgcagaagaaacaattgaactcaagaagagaaagagagaatgtaacta 4078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4019 attggaataacgtgcagaagaaacaattgaactcaagaagagaaagagagaatgtaacta 4078


Query: 4079 cagaagccgttgagccaattgtgtcacctccactctcccaagaagttcaaagttctcaaa 4138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4079 cagaagccgttgagccaattgtgtcacctccactctcccaagaagttcaaagttctcaaa 4138


Query: 4139 cattgcaaccaattactccaag 4160
||||||||||||||||||||||
Sbjct: 4139 cattgcaaccaattactccaag 4160


Score = 1586 bits (800), Expect = 0.0
Identities = 800/800 (100%)
Strand = Plus / Plus


Query: 1 tatggggagaattggtcagatatcattccacttattgaatttgcaatgaactcatcaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatggggagaattggtcagatatcattccacttattgaatttgcaatgaactcatcaatg 60


Query: 61 agcaagtctacaaagatgtcaccattccaaatcgtttatggattccaatccaccaactcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcaagtctacaaagatgtcaccattccaaatcgtttatggattccaatccaccaactcc 120


Query: 121 cgttaatcatttcaattcattaacaaagactcgtataccaatgagcaacatcaaaaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgttaatcatttcaattcattaacaaagactcgtataccaatgagcaacatcaaaaaaga 180


Query: 181 ttgtccggtgataatatactagatgctcaaatcaatgctcaaaagtattacaaccgaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgtccggtgataatatactagatgctcaaatcaatgctcaaaagtattacaaccgaggg 240


Query: 241 tcgtggtgatgttatcttcgtagtcggagaaaaaggtgatggttaaaagaaaattcttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcgtggtgatgttatcttcgtagtcggagaaaaaggtgatggttaaaagaaaattcttcc 300


Query: 301 aaactaatctttcaaaagatctaatctctcacaaacttgaatccaagaattgtggaccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaactaatctttcaaaagatctaatctctcacaaacttgaatccaagaattgtggaccat 360


Query: 361 tcataatcactgccgttcatggtaataatgtaacactcgagtttagtaggttatccaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcataatcactgccgttcatggtaataatgtaacactcgagtttagtaggttatccaaag 420


Query: 421 aaacacaatgtgttcaacaaggatcaaatcgtaaaactatacgaggacagtgagtggtta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaacacaatgtgttcaacaaggatcaaatcgtaaaactatacgaggacagtgagtggtta 480


Query: 481 agagaagagatatcgatgcccgaacctgaggagatggacgaagcaagttacgaagttgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agagaagagatatcgatgcccgaacctgaggagatggacgaagcaagttacgaagttgaa 540


Query: 541 agtattctcaatcacgataaagtcaaaaagatgtacctagtgaagttcaaaggttaccca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agtattctcaatcacgataaagtcaaaaagatgtacctagtgaagttcaaaggttaccca 600


Query: 601 gaacctgaatggatcaaagaagtcgatacagactgtgaagagttagtcagagagtattgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaacctgaatggatcaaagaagtcgatacagactgtgaagagttagtcagagagtattgg 660


Query: 661 aataacgtgcagaagaaacaattgaatctcaagaagagaaagagagaatgtaactacaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aataacgtgcagaagaaacaattgaatctcaagaagagaaagagagaatgtaactacaga 720


Query: 721 agccgttgagccaattgtgtcacctccactcttcccaagaagttcaaagttctcaaacat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agccgttgagccaattgtgtcacctccactcttcccaagaagttcaaagttctcaaacat 780


Query: 781 tgcaaccaattactccaaga 800
||||||||||||||||||||
Sbjct: 781 tgcaaccaattactccaaga 800


Score = 1423 bits (718), Expect = 0.0
Identities = 791/802 (98%), Gaps = 10/802 (1%)
Strand = Plus / Plus


Query: 1 tatggggagaattggtcagatatcattcc-acttattgaatttgcaatgaactcatcaat 59
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3368 tatggggagaattggtcagatatcattcccacttattgaatttgcaatgaactcatcaat 3427


Query: 60 gagcaagtctacaaagatgtcaccattcc-aaatcgtttatggattccaatccaccaact 118
||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 3428 gagcaagtctacaaagatgtcaccattcccaaatcgtatatggattc-aatccaccaact 3486


Query: 119 cccgttaatcatttcaattcattaacaaagactcgtataccaatgagcaacatcaaaaaa 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3487 cccgttaatcatttcaattcattaacaaagactcgtataccaatgagcaacatcaaaaa- 3545


Query: 179 gattgtccggtgataatatactagatgctcaaatcaatgctcaaaagtattacaaccgag 238
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3546 gattgtccg-tgataatatactagatgctcaaatcaatgctcaaaagtattacaaccgag 3604


Query: 239 ggtcgtggtgatgttatcttcgtagtcggagaaaaaggtgatggttaaaagaaaattctt 298
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3605 g-tcgtggtgatgttatcttcgtagtcggagaaaa-ggtgatggttaaaagaaaattctt 3662


Query: 299 ccaaactaatctttcaaaagatctaatctctcacaaacttgaatccaagaattgtggacc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3663 ccaaactaatctttcaaaagatctaatctctcacaaacttgaatccaagaattgtggacc 3722


Query: 359 attcataatcactgccgttcatggtaataatgtaacactcgagtttagtaggttatccaa 418
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3723 attcataatcactgccgttcatggtaataatgtaacactcga-tttagtaggttatccaa 3781


Query: 419 agaaacacaatgtgttcaacaaggatcaaatcgtaaaactatacgaggacagtgagtggt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3782 agaaacacaatgtgttcaacaaggatcaaatcgtaaaactatacgaggacagtgagtggt 3841


Query: 479 taagagaagagatatcgatgcccgaacctgaggagatggacgaagcaagttacgaagttg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3842 taagagaagagatatcgatgcccgaacctgaggagatggacgaagcaagttacgaagttg 3901


Query: 539 aaagtattctcaatcacgataaagtcaaaaagatgtacctagtgaagttcaaaggttacc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3902 aaagtattctcaatcacgataaagtcaaaaagatgtacctagtgaagttcaaaggttacc 3961


Query: 599 cagaacctgaatggatcaaagaagtcgatacagactgtgaagagttagtcagagagtatt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3962 cagaacctgaatggatcaaagaagtcgatacagactgtgaagagttagtcagagagtatt 4021


Query: 659 ggaataacgtgcagaagaaacaattgaatctcaagaagagaaagagagaatgtaactaca 718
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4022 ggaataacgtgcagaagaaacaattgaa-ctcaagaagagaaagagagaatgtaactaca 4080


Query: 719 gaagccgttgagccaattgtgtcacctccactcttcccaagaagttcaaagttctcaaac 778
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4081 gaagccgttgagccaattgtgtcacctccactc-tcccaagaagttcaaagttctcaaac 4139


Query: 779 attgcaaccaattactccaaga 800
||||||||||||||||||||||
Sbjct: 4140 attgcaaccaattactccaaga 4161


Score = 1421 bits (717), Expect = 0.0
Identities = 790/801 (98%), Gaps = 10/801 (1%)
Strand = Plus / Plus


Query: 3368 tatggggagaattggtcagatatcattcccacttattgaatttgcaatgaactcatcaat 3427
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 tatggggagaattggtcagatatcattcc-acttattgaatttgcaatgaactcatcaat 59


Query: 3428 gagcaagtctacaaagatgtcaccattcccaaatcgtatatggattc-aatccaccaact 3486
||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 60 gagcaagtctacaaagatgtcaccattcc-aaatcgtttatggattccaatccaccaact 118


Query: 3487 cccgttaatcatttcaattcattaacaaagactcgtataccaatgagcaacatcaaaaa- 3545
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 cccgttaatcatttcaattcattaacaaagactcgtataccaatgagcaacatcaaaaaa 178


Query: 3546 gattgtccg-tgataatatactagatgctcaaatcaatgctcaaaagtattacaaccgag 3604
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 gattgtccggtgataatatactagatgctcaaatcaatgctcaaaagtattacaaccgag 238


Query: 3605 g-tcgtggtgatgttatcttcgtagtcggagaaaa-ggtgatggttaaaagaaaattctt 3662
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 239 ggtcgtggtgatgttatcttcgtagtcggagaaaaaggtgatggttaaaagaaaattctt 298


Query: 3663 ccaaactaatctttcaaaagatctaatctctcacaaacttgaatccaagaattgtggacc 3722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ccaaactaatctttcaaaagatctaatctctcacaaacttgaatccaagaattgtggacc 358


Query: 3723 attcataatcactgccgttcatggtaataatgtaacactcga-tttagtaggttatccaa 3781
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 359 attcataatcactgccgttcatggtaataatgtaacactcgagtttagtaggttatccaa 418


Query: 3782 agaaacacaatgtgttcaacaaggatcaaatcgtaaaactatacgaggacagtgagtggt 3841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 agaaacacaatgtgttcaacaaggatcaaatcgtaaaactatacgaggacagtgagtggt 478


Query: 3842 taagagaagagatatcgatgcccgaacctgaggagatggacgaagcaagttacgaagttg 3901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 taagagaagagatatcgatgcccgaacctgaggagatggacgaagcaagttacgaagttg 538


Query: 3902 aaagtattctcaatcacgataaagtcaaaaagatgtacctagtgaagttcaaaggttacc 3961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 aaagtattctcaatcacgataaagtcaaaaagatgtacctagtgaagttcaaaggttacc 598


Query: 3962 cagaacctgaatggatcaaagaagtcgatacagactgtgaagagttagtcagagagtatt 4021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 cagaacctgaatggatcaaagaagtcgatacagactgtgaagagttagtcagagagtatt 658


Query: 4022 ggaataacgtgcagaagaaacaattgaa-ctcaagaagagaaagagagaatgtaactaca 4080
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 659 ggaataacgtgcagaagaaacaattgaatctcaagaagagaaagagagaatgtaactaca 718


Query: 4081 gaagccgttgagccaattgtgtcacctccactc-tcccaagaagttcaaagttctcaaac 4139
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 719 gaagccgttgagccaattgtgtcacctccactcttcccaagaagttcaaagttctcaaac 778


Query: 4140 attgcaaccaattactccaag 4160
|||||||||||||||||||||
Sbjct: 779 attgcaaccaattactccaag 799


Score = 434 bits (219), Expect = e-121
Identities = 219/219 (100%)
Strand = Plus / Plus


Query: 4224 tacttcaagtgaggatgatgaacttgatcttagtttacaaattaaaacaactagatcagg 4283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 tacttcaagtgaggatgatgaacttgatcttagtttacaaattaaaacaactagatcagg 922


Query: 4284 aagaaaagttacacccaagagtttatagtccacctctgagccatagctagcctaaagaag 4343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 aagaaaagttacacccaagagtttatagtccacctctgagccatagctagcctaaagaag 982


Query: 4344 gaaggggaaggtgttagagactcaaaactaaattaatttaaagttagtatgagctcaaca 4403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 gaaggggaaggtgttagagactcaaaactaaattaatttaaagttagtatgagctcaaca 1042


Query: 4404 acgtaacaaattcgcgcatctccatgtaaaaatatttca 4442
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 acgtaacaaattcgcgcatctccatgtaaaaatatttca 1081


Score = 434 bits (219), Expect = e-121
Identities = 219/219 (100%)
Strand = Plus / Plus


Query: 863 tacttcaagtgaggatgatgaacttgatcttagtttacaaattaaaacaactagatcagg 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 tacttcaagtgaggatgatgaacttgatcttagtttacaaattaaaacaactagatcagg 922


Query: 923 aagaaaagttacacccaagagtttatagtccacctctgagccatagctagcctaaagaag 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 aagaaaagttacacccaagagtttatagtccacctctgagccatagctagcctaaagaag 982


Query: 983 gaaggggaaggtgttagagactcaaaactaaattaatttaaagttagtatgagctcaaca 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 gaaggggaaggtgttagagactcaaaactaaattaatttaaagttagtatgagctcaaca 1042


Query: 1043 acgtaacaaattcgcgcatctccatgtaaaaatatttca 1081
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 acgtaacaaattcgcgcatctccatgtaaaaatatttca 1081


Score = 434 bits (219), Expect = e-121
Identities = 219/219 (100%)
Strand = Plus / Plus


Query: 4224 tacttcaagtgaggatgatgaacttgatcttagtttacaaattaaaacaactagatcagg 4283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4224 tacttcaagtgaggatgatgaacttgatcttagtttacaaattaaaacaactagatcagg 4283


Query: 4284 aagaaaagttacacccaagagtttatagtccacctctgagccatagctagcctaaagaag 4343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4284 aagaaaagttacacccaagagtttatagtccacctctgagccatagctagcctaaagaag 4343


Query: 4344 gaaggggaaggtgttagagactcaaaactaaattaatttaaagttagtatgagctcaaca 4403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4344 gaaggggaaggtgttagagactcaaaactaaattaatttaaagttagtatgagctcaaca 4403


Query: 4404 acgtaacaaattcgcgcatctccatgtaaaaatatttca 4442
|||||||||||||||||||||||||||||||||||||||
Sbjct: 4404 acgtaacaaattcgcgcatctccatgtaaaaatatttca 4442


Score = 434 bits (219), Expect = e-121
Identities = 219/219 (100%)
Strand = Plus / Plus


Query: 863 tacttcaagtgaggatgatgaacttgatcttagtttacaaattaaaacaactagatcagg 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4224 tacttcaagtgaggatgatgaacttgatcttagtttacaaattaaaacaactagatcagg 4283


Query: 923 aagaaaagttacacccaagagtttatagtccacctctgagccatagctagcctaaagaag 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4284 aagaaaagttacacccaagagtttatagtccacctctgagccatagctagcctaaagaag 4343


Query: 983 gaaggggaaggtgttagagactcaaaactaaattaatttaaagttagtatgagctcaaca 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4344 gaaggggaaggtgttagagactcaaaactaaattaatttaaagttagtatgagctcaaca 4403


Query: 1043 acgtaacaaattcgcgcatctccatgtaaaaatatttca 1081
|||||||||||||||||||||||||||||||||||||||
Sbjct: 4404 acgtaacaaattcgcgcatctccatgtaaaaatatttca 4442


Score = 77.8 bits (39), Expect = 1e-13
Identities = 39/39 (100%)
Strand = Plus / Plus


Query: 4551 ttctgattttcggtttagtttcataacgcccttactttt 4589
|||||||||||||||||||||||||||||||||||||||
Sbjct: 4551 ttctgattttcggtttagtttcataacgcccttactttt 4589


>Contig-U16569-1 (Contig-U16569-1Q) /CSM_Contig/Contig-U16569-1Q.Seq.d
Length = 1601

Score = 2113 bits (1066), Expect = 0.0
Identities = 1145/1158 (98%), Gaps = 10/1158 (0%)
Strand = Plus / Plus


Query: 3011 ttcttatcgctaccaaaaacaatgtatgcaataaacggatttacagttgaagtcgatcaa 3070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcttatcgctaccaaaaacaatgtatgcaataaacggatttacagttgaagtcgatcaa 60


Query: 3071 gtttgtgtcattgtttgtagattatctaaaatggttcatatagttccatgtcataagaca 3130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtttgtgtcattgtttgtagattatctaaaatggttcatatagttccatgtcataagaca 120


Query: 3131 atagatgcccaacatactgctcaattattgttgaatcatgtgttcagactccatggttat 3190
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atagatgcccaacataccgttcaattattgttgaatcatgtgttcagactccatggttat 180


Query: 3191 ccaagaacaatcgtctccgatagagatccaagattcctttcagaaatatgggagagatgg 3250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaagaacaatcgtctccgatagagatccaagattcctttcagaaatatgggagagatgg 240


Query: 3251 gcaaagacgatggattctaaactcaagatgactgtggcacacagagcacaagctgatggt 3310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcaaagacgatggattctaaactcaagatgactgtggcacacagagcacaagctgatggt 300


Query: 3311 caaactgaaagaatgaatagagaaattattagaatattaactaaagcctcaacagagtat 3370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaactgaaagaatgaatagagaaattattagaatattaactaaagcctcaacagagtat 360


Query: 3371 ggggagaattggtcagatatcattcccacttattgaatttgcaatgaactcatcaatgag 3430
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 361 ggggagaattggtcagatatcatt-ccacttattgaatttgcaatgaactcatcaatgag 419


Query: 3431 caagtctacaaagatgtcaccattcccaaatcgtatatggatt-caatccaccaactccc 3489
|||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||
Sbjct: 420 caagtctacaaagatgtcaccatt-ccaaatcgtttatggattccaatccaccaactccc 478


Query: 3490 gttaatcatttcaattcattaacaaagactcgtataccaatgagcaacatc-aaaaagat 3548
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 479 gttaatcatttcaattcattaacaaagactcgtataccaatgagcaacatcaaaaaagat 538


Query: 3549 tgtcc-gtgataatatactagatgctcaaatcaatgctcaaaagtattacaaccga-ggt 3606
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 539 tgtccggtgataatatactagatgctcaaatcaatgctcaaaagtattacaaccgagggt 598


Query: 3607 cgtggtgatgttatcttcgtagtcggag-aaaaggtgatggttaaaagaaaattcttcca 3665
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 599 cgtggtgatgttatcttcgtagtcggagaaaaaggtgatggttaaaagaaaattcttcca 658


Query: 3666 aactaatctttcaaaagatctaatctctcacaaacttgaatccaagaattgtggaccatt 3725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 aactaatctttcaaaagatctaatctctcacaaacttgaatccaagaattgtggaccatt 718


Query: 3726 cataatcactgccgttcatggtaataatgtaacactcga-tttagtaggttatccaaaga 3784
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 719 cataatcactgccgttcatggtaataatgtaacactcgagtttagtaggttatccaaaga 778


Query: 3785 aacacaatgtgttcaacaaggatcaaatcgtaaaactatacgaggacagtgagtggttaa 3844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 aacacaatgtgttcaacaaggatcaaatcgtaaaactatacgaggacagtgagtggttaa 838


Query: 3845 gagaagagatatcgatgcccgaacctgaggagatggacgaagcaagttacgaagttgaaa 3904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 gagaagagatatcgatgcccgaacctgaggagatggacgaagcaagttacgaagttgaaa 898


Query: 3905 gtattctcaatcacgataaagtcaaaaagatgtacctagtgaagttcaaaggttacccag 3964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 gtattctcaatcacgataaagtcaaaaagatgtacctagtgaagttcaaaggttacccag 958


Query: 3965 aacctgaatggatcaaagaagtcgatacagactgtgaagagttagtcagagagtattgga 4024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 aacctgaatggatcaaagaagtcgatacagactgtgaagagttagtcagagagtattgga 1018


Query: 4025 ataacgtgcagaagaaacaattgaa-ctcaagaagagaaagagagaatgtaactacagaa 4083
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1019 ataacgtgcagaagaaacaattgaatctcaagaagagaaagagagaatgtaactacagaa 1078


Query: 4084 gccgttgagccaattgtgtcacctccactc-tcccaagaagttcaaagttctcaaacatt 4142
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1079 gccgttgagccaattgtgtcacctccactcttcccaagaagttcaaagttctcaaacatt 1138


Query: 4143 gcaaccaattactccaag 4160
||||||||||||||||||
Sbjct: 1139 gcaaccaattactccaag 1156


Score = 1586 bits (800), Expect = 0.0
Identities = 800/800 (100%)
Strand = Plus / Plus


Query: 1 tatggggagaattggtcagatatcattccacttattgaatttgcaatgaactcatcaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tatggggagaattggtcagatatcattccacttattgaatttgcaatgaactcatcaatg 417


Query: 61 agcaagtctacaaagatgtcaccattccaaatcgtttatggattccaatccaccaactcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 agcaagtctacaaagatgtcaccattccaaatcgtttatggattccaatccaccaactcc 477


Query: 121 cgttaatcatttcaattcattaacaaagactcgtataccaatgagcaacatcaaaaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cgttaatcatttcaattcattaacaaagactcgtataccaatgagcaacatcaaaaaaga 537


Query: 181 ttgtccggtgataatatactagatgctcaaatcaatgctcaaaagtattacaaccgaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ttgtccggtgataatatactagatgctcaaatcaatgctcaaaagtattacaaccgaggg 597


Query: 241 tcgtggtgatgttatcttcgtagtcggagaaaaaggtgatggttaaaagaaaattcttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tcgtggtgatgttatcttcgtagtcggagaaaaaggtgatggttaaaagaaaattcttcc 657


Query: 301 aaactaatctttcaaaagatctaatctctcacaaacttgaatccaagaattgtggaccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 aaactaatctttcaaaagatctaatctctcacaaacttgaatccaagaattgtggaccat 717


Query: 361 tcataatcactgccgttcatggtaataatgtaacactcgagtttagtaggttatccaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tcataatcactgccgttcatggtaataatgtaacactcgagtttagtaggttatccaaag 777


Query: 421 aaacacaatgtgttcaacaaggatcaaatcgtaaaactatacgaggacagtgagtggtta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 aaacacaatgtgttcaacaaggatcaaatcgtaaaactatacgaggacagtgagtggtta 837


Query: 481 agagaagagatatcgatgcccgaacctgaggagatggacgaagcaagttacgaagttgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 agagaagagatatcgatgcccgaacctgaggagatggacgaagcaagttacgaagttgaa 897


Query: 541 agtattctcaatcacgataaagtcaaaaagatgtacctagtgaagttcaaaggttaccca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 agtattctcaatcacgataaagtcaaaaagatgtacctagtgaagttcaaaggttaccca 957


Query: 601 gaacctgaatggatcaaagaagtcgatacagactgtgaagagttagtcagagagtattgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 gaacctgaatggatcaaagaagtcgatacagactgtgaagagttagtcagagagtattgg 1017


Query: 661 aataacgtgcagaagaaacaattgaatctcaagaagagaaagagagaatgtaactacaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 aataacgtgcagaagaaacaattgaatctcaagaagagaaagagagaatgtaactacaga 1077


Query: 721 agccgttgagccaattgtgtcacctccactcttcccaagaagttcaaagttctcaaacat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1078 agccgttgagccaattgtgtcacctccactcttcccaagaagttcaaagttctcaaacat 1137


Query: 781 tgcaaccaattactccaaga 800
||||||||||||||||||||
Sbjct: 1138 tgcaaccaattactccaaga 1157


Score = 434 bits (219), Expect = e-121
Identities = 219/219 (100%)
Strand = Plus / Plus


Query: 4224 tacttcaagtgaggatgatgaacttgatcttagtttacaaattaaaacaactagatcagg 4283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 tacttcaagtgaggatgatgaacttgatcttagtttacaaattaaaacaactagatcagg 1279


Query: 4284 aagaaaagttacacccaagagtttatagtccacctctgagccatagctagcctaaagaag 4343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1280 aagaaaagttacacccaagagtttatagtccacctctgagccatagctagcctaaagaag 1339


Query: 4344 gaaggggaaggtgttagagactcaaaactaaattaatttaaagttagtatgagctcaaca 4403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 gaaggggaaggtgttagagactcaaaactaaattaatttaaagttagtatgagctcaaca 1399


Query: 4404 acgtaacaaattcgcgcatctccatgtaaaaatatttca 4442
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1400 acgtaacaaattcgcgcatctccatgtaaaaatatttca 1438


Score = 434 bits (219), Expect = e-121
Identities = 219/219 (100%)
Strand = Plus / Plus


Query: 863 tacttcaagtgaggatgatgaacttgatcttagtttacaaattaaaacaactagatcagg 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 tacttcaagtgaggatgatgaacttgatcttagtttacaaattaaaacaactagatcagg 1279


Query: 923 aagaaaagttacacccaagagtttatagtccacctctgagccatagctagcctaaagaag 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1280 aagaaaagttacacccaagagtttatagtccacctctgagccatagctagcctaaagaag 1339


Query: 983 gaaggggaaggtgttagagactcaaaactaaattaatttaaagttagtatgagctcaaca 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 gaaggggaaggtgttagagactcaaaactaaattaatttaaagttagtatgagctcaaca 1399


Query: 1043 acgtaacaaattcgcgcatctccatgtaaaaatatttca 1081
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1400 acgtaacaaattcgcgcatctccatgtaaaaatatttca 1438


Score = 58.0 bits (29), Expect = 1e-07
Identities = 29/29 (100%)
Strand = Plus / Plus


Query: 1199 ttctgatttttcggtttagttggaataac 1227
|||||||||||||||||||||||||||||
Sbjct: 1556 ttctgatttttcggtttagttggaataac 1584


Score = 36.2 bits (18), Expect = 0.47
Identities = 31/34 (91%), Gaps = 1/34 (2%)
Strand = Plus / Plus


Query: 4557 ttttcggtttagtttca-taacgcccttactttt 4589
|||||||||||||| | ||||||||||||||||
Sbjct: 1563 ttttcggtttagttggaataacgcccttactttt 1596


>Contig-U16568-1 (Contig-U16568-1Q) /CSM_Contig/Contig-U16568-1Q.Seq.d
Length = 2264

Score = 289 bits (146), Expect = 2e-77
Identities = 146/146 (100%)
Strand = Plus / Plus


Query: 1238 atcataataaagaaagatcaagatgttgaaccaacaaagaaacaaatctattattcaaca 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2119 atcataataaagaaagatcaagatgttgaaccaacaaagaaacaaatctattattcaaca 2178


Query: 1298 gatgatcataagagacatgtcgaagaaatggttatcaaatttatagatttaggtattatc 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2179 gatgatcataagagacatgtcgaagaaatggttatcaaatttatagatttaggtattatc 2238


Query: 1358 aaaagatcagaatcaaattactcatc 1383
||||||||||||||||||||||||||
Sbjct: 2239 aaaagatcagaatcaaattactcatc 2264


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 68,841
Number of Sequences: 8402
Number of extensions: 68841
Number of successful extensions: 5653
Number of sequences better than 10.0: 144
length of query: 4599
length of database: 8,075,542
effective HSP length: 17
effective length of query: 4582
effective length of database: 7,932,708
effective search space: 36347668056
effective search space used: 36347668056
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 4.12
Homology vs DNA
Query= Contig-U16571-1 (Contig-U16571-1Q) /CSM_Contig/Contig-U16571-1Q.Seq.d
(4599 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AF049230) Dictyostelium discoideum LTR-retrotransposon Skip... 2646 0.0 3
(AF017040) Dictyostelium discoideum LTR-retrotransposon Skip... 2646 0.0 3
(FJ387222) Dictyostelium discoideum chromosome 3 centromere ... 2603 0.0 3
(FJ387224) Dictyostelium discoideum chromosome 2 C2 inner ce... 2583 0.0 3
(FJ387223) Dictyostelium discoideum chromosome 2 C2 outer ce... 2559 0.0 5
(BJ351940) Dictyostelium discoideum cDNA clone:dda45h06, 3' ... 1493 0.0 3
(BJ444442) Dictyostelium discoideum cDNA clone:ddv56k12, 3' ... 1461 0.0 1
(BJ355853) Dictyostelium discoideum cDNA clone:dda58n09, 3' ... 1461 0.0 1
(BJ355260) Dictyostelium discoideum cDNA clone:dda56a11, 3' ... 1390 0.0 2
(BJ350887) Dictyostelium discoideum cDNA clone:dda41g12, 3' ... 1390 0.0 2
(BJ350128) Dictyostelium discoideum cDNA clone:dda38g20, 3' ... 1390 0.0 2
(BJ349526) Dictyostelium discoideum cDNA clone:dda36c24, 3' ... 1390 0.0 2
(BJ348729) Dictyostelium discoideum cDNA clone:dda34l06, 3' ... 1390 0.0 2
(BJ347937) Dictyostelium discoideum cDNA clone:dda31m16, 3' ... 1390 0.0 2
(BJ352461) Dictyostelium discoideum cDNA clone:dda46g21, 3' ... 1388 0.0 1
(BJ408839) Dictyostelium discoideum cDNA clone:dds47j06, 3' ... 1386 0.0 2
(BJ404680) Dictyostelium discoideum cDNA clone:dds29d12, 3' ... 1386 0.0 3
(BJ352193) Dictyostelium discoideum cDNA clone:dda45p20, 3' ... 1380 0.0 1
(BJ442932) Dictyostelium discoideum cDNA clone:ddv51k08, 3' ... 1366 0.0 2
(BJ404381) Dictyostelium discoideum cDNA clone:dds28i09, 3' ... 1360 0.0 1
(BJ352371) Dictyostelium discoideum cDNA clone:dda46d17, 3' ... 1360 0.0 1
(BJ441601) Dictyostelium discoideum cDNA clone:ddv47a08, 3' ... 1358 0.0 1
(BJ373818) Dictyostelium discoideum cDNA clone:ddc4k04, 3' e... 1354 0.0 2
(BJ353822) Dictyostelium discoideum cDNA clone:dda51d18, 3' ... 1354 0.0 1
(BJ355670) Dictyostelium discoideum cDNA clone:dda57h24, 3' ... 1350 0.0 1
(BJ358130) Dictyostelium discoideum cDNA clone:dda65h23, 3' ... 1348 0.0 1
(BJ352826) Dictyostelium discoideum cDNA clone:dda48e04, 3' ... 1346 0.0 1
(BJ350571) Dictyostelium discoideum cDNA clone:dda40g10, 3' ... 1346 0.0 1
(BJ352772) Dictyostelium discoideum cDNA clone:dda47j21, 3' ... 1344 0.0 1
(BJ351093) Dictyostelium discoideum cDNA clone:dda42d03, 3' ... 1344 0.0 1
(BJ442382) Dictyostelium discoideum cDNA clone:ddv49o14, 3' ... 1340 0.0 1
(BJ403555) Dictyostelium discoideum cDNA clone:dds25c16, 3' ... 1338 0.0 1
(BJ444604) Dictyostelium discoideum cDNA clone:ddv56l21, 3' ... 1330 0.0 2
(BJ406691) Dictyostelium discoideum cDNA clone:dds36j06, 3' ... 1328 0.0 1
(BJ354828) Dictyostelium discoideum cDNA clone:dda54k20, 3' ... 1328 0.0 1
(BJ442400) Dictyostelium discoideum cDNA clone:ddv49c20, 3' ... 1318 0.0 2
(BJ353945) Dictyostelium discoideum cDNA clone:dda52b02, 3' ... 1312 0.0 1
(BJ353970) Dictyostelium discoideum cDNA clone:dda52h01, 3' ... 1304 0.0 1
(BJ359381) Dictyostelium discoideum cDNA clone:ddc14n04, 5' ... 1302 0.0 1
(BJ327096) Dictyostelium discoideum cDNA clone:dda19k01, 5' ... 1227 0.0 1
(BJ363942) Dictyostelium discoideum cDNA clone:ddc29o05, 5' ... 1217 0.0 1
(BJ330696) Dictyostelium discoideum cDNA clone:dda32n10, 5' ... 1213 0.0 1
(BJ333059) Dictyostelium discoideum cDNA clone:dda41g12, 5' ... 1211 0.0 1
(BJ439803) Dictyostelium discoideum cDNA clone:ddv41m13, 3' ... 1207 0.0 1
(BJ391872) Dictyostelium discoideum cDNA clone:dds25c16, 5' ... 1207 0.0 1
(BJ330470) Dictyostelium discoideum cDNA clone:dda31m16, 5' ... 1207 0.0 1
(BJ371573) Dictyostelium discoideum cDNA clone:ddc58h17, 5' ... 1197 0.0 1
(BJ327097) Dictyostelium discoideum cDNA clone:dda19k02, 5' ... 1195 0.0 1
(BJ402032) Dictyostelium discoideum cDNA clone:dds20a08, 3' ... 1178 0.0 1
(AU061463) Dictyostelium discoideum slug cDNA, clone SLE345. 1174 0.0 1
(BJ364550) Dictyostelium discoideum cDNA clone:ddc32j01, 5' ... 1172 0.0 1
(BJ439190) Dictyostelium discoideum cDNA clone:ddv39o14, 3' ... 1168 0.0 1
(AU061465) Dictyostelium discoideum slug cDNA, clone SLE355. 1166 0.0 1
(BJ341247) Dictyostelium discoideum cDNA clone:dda5g22, 3' e... 1162 0.0 1
(BJ424349) Dictyostelium discoideum cDNA clone:ddv52l05, 5' ... 1150 0.0 1
(BJ439216) Dictyostelium discoideum cDNA clone:ddv39c24, 3' ... 1146 0.0 3
(BJ376598) Dictyostelium discoideum cDNA clone:ddc29o05, 3' ... 1142 0.0 4
(BJ335783) Dictyostelium discoideum cDNA clone:dda51d18, 5' ... 1132 0.0 1
(BJ335829) Dictyostelium discoideum cDNA clone:dda51o18, 5' ... 1128 0.0 1
(BJ411827) Dictyostelium discoideum cDNA clone:ddv6a01, 5' e... 1124 0.0 1
(BJ336717) Dictyostelium discoideum cDNA clone:dda54k20, 5' ... 1124 0.0 1
(BJ443185) Dictyostelium discoideum cDNA clone:ddv52l05, 3' ... 1096 0.0 1
(BJ378560) Dictyostelium discoideum cDNA clone:ddc32j01, 3' ... 1094 0.0 1
(BJ334803) Dictyostelium discoideum cDNA clone:dda47j21, 5' ... 1090 0.0 1
(BJ424102) Dictyostelium discoideum cDNA clone:ddv51k08, 5' ... 1086 0.0 1
(BJ407462) Dictyostelium discoideum cDNA clone:dds38k16, 3' ... 1076 0.0 1
(BJ348282) Dictyostelium discoideum cDNA clone:dda32b21, 3' ... 1076 0.0 1
(BJ372796) Dictyostelium discoideum cDNA clone:ddc14n04, 3' ... 1066 0.0 2
(BJ445726) Dictyostelium discoideum cDNA clone:ddv60n12, 3' ... 1047 0.0 2
(BJ407862) Dictyostelium discoideum cDNA clone:dds43l20, 3' ... 1027 0.0 3
(BJ385155) Dictyostelium discoideum cDNA clone:ddc54d01, 3' ... 1019 0.0 3
(BJ394857) Dictyostelium discoideum cDNA clone:dds36b22, 5' ... 825 0.0 2
(BJ420560) Dictyostelium discoideum cDNA clone:ddv39n16, 5' ... 821 0.0 2
(BJ332353) Dictyostelium discoideum cDNA clone:dda38g20, 5' ... 821 0.0 2
(BJ389832) Dictyostelium discoideum cDNA clone:dds20a08, 5' ... 749 0.0 3
(BJ328117) Dictyostelium discoideum cDNA clone:dda23b06, 5' ... 527 0.0 4
(BJ442798) Dictyostelium discoideum cDNA clone:ddv51b04, 3' ... 1001 0.0 2
(BJ349002) Dictyostelium discoideum cDNA clone:dda35f01, 3' ... 751 0.0 4
(BJ355431) Dictyostelium discoideum cDNA clone:dda57f02, 3' ... 1072 0.0 1
(BJ420563) Dictyostelium discoideum cDNA clone:ddv39o14, 5' ... 737 0.0 2
(BJ324337) Dictyostelium discoideum cDNA clone:dda5g22, 5' e... 1065 0.0 1
(BJ337095) Dictyostelium discoideum cDNA clone:dda56a11, 5' ... 1041 0.0 2
(BJ386544) Dictyostelium discoideum cDNA clone:ddc58h17, 3' ... 729 0.0 4
(BJ392884) Dictyostelium discoideum cDNA clone:dds29d12, 5' ... 733 0.0 2
(BJ356987) Dictyostelium discoideum cDNA clone:dda62h06, 3' ... 1049 0.0 1
(BJ356898) Dictyostelium discoideum cDNA clone:dda61f19, 3' ... 1049 0.0 1
(BJ389972) Dictyostelium discoideum cDNA clone:dds20a20, 5' ... 702 0.0 3
(BJ430068) Dictyostelium discoideum cDNA clone:ddv6a01, 3' e... 1047 0.0 1
(BJ440427) Dictyostelium discoideum cDNA clone:ddv43l17, 3' ... 1043 0.0 1
(BJ386187) Dictyostelium discoideum cDNA clone:ddc57m08, 3' ... 704 0.0 4
(BJ344395) Dictyostelium discoideum cDNA clone:dda19k01, 3' ... 946 0.0 3
(BJ407191) Dictyostelium discoideum cDNA clone:dds37c20, 3' ... 664 0.0 5
(BJ344396) Dictyostelium discoideum cDNA clone:dda19k02, 3' ... 918 0.0 4
(BJ396237) Dictyostelium discoideum cDNA clone:dds41l21, 5' ... 607 0.0 2
(BJ348183) Dictyostelium discoideum cDNA clone:dda32n10, 3' ... 640 0.0 5
(BJ401892) Dictyostelium discoideum cDNA clone:dds19b20, 3' ... 668 0.0 4
(BJ337245) Dictyostelium discoideum cDNA clone:dda56d19, 5' ... 636 0.0 3
(BJ410965) Dictyostelium discoideum cDNA clone:ddv2c13, 5' e... 902 0.0 2
(BJ332913) Dictyostelium discoideum cDNA clone:dda40g10, 5' ... 601 0.0 2
(BJ437375) Dictyostelium discoideum cDNA clone:ddv34f06, 3' ... 993 0.0 1
(BJ406881) Dictyostelium discoideum cDNA clone:dds36b22, 3' ... 609 0.0 5
(BJ423579) Dictyostelium discoideum cDNA clone:ddv49o14, 5' ... 969 0.0 1
(BJ353873) Dictyostelium discoideum cDNA clone:dda51o18, 3' ... 559 0.0 6
(BJ358250) Dictyostelium discoideum cDNA clone:dda56d19, 3' ... 555 0.0 5
(BJ423908) Dictyostelium discoideum cDNA clone:ddv50e21, 5' ... 662 0.0 2
(BJ370405) Dictyostelium discoideum cDNA clone:ddc54d01, 5' ... 918 0.0 1
(BJ345220) Dictyostelium discoideum cDNA clone:dda23b06, 3' ... 585 0.0 4
(BJ403806) Dictyostelium discoideum cDNA clone:dds26h07, 3' ... 561 0.0 4
(BJ349346) Dictyostelium discoideum cDNA clone:dda36p01, 3' ... 549 0.0 5
(BJ409475) Dictyostelium discoideum cDNA clone:dds42a11, 3' ... 878 0.0 1
(BJ408586) Dictyostelium discoideum cDNA clone:dds46f10, 3' ... 492 0.0 3
(BJ394040) Dictyostelium discoideum cDNA clone:dds33g13, 5' ... 775 0.0 2
(BJ439186) Dictyostelium discoideum cDNA clone:ddv39n16, 3' ... 460 0.0 5
(BJ399372) Dictyostelium discoideum cDNA clone:dds5l18, 3' e... 494 0.0 4
(AU034801) Dictyostelium discoideum slug cDNA, clone SLE345. 466 0.0 3
(BJ442728) Dictyostelium discoideum cDNA clone:ddv50e21, 3' ... 470 0.0 5
(BJ389696) Dictyostelium discoideum cDNA clone:dds19b20, 5' ... 773 0.0 2
(BJ423595) Dictyostelium discoideum cDNA clone:ddv49c20, 5' ... 549 0.0 2
(BJ405940) Dictyostelium discoideum cDNA clone:dds33g13, 3' ... 470 0.0 4
(BJ411849) Dictyostelium discoideum cDNA clone:ddv6e01, 5' e... 799 0.0 1
(BJ338509) Dictyostelium discoideum cDNA clone:dda61f19, 5' ... 787 0.0 1
(BJ429148) Dictyostelium discoideum cDNA clone:ddv2c13, 3' e... 460 0.0 4
(BJ407829) Dictyostelium discoideum cDNA clone:dds43d20, 3' ... 704 0.0 2
(AU266936) Dictyostelium discoideum vegetative cDNA clone:VS... 749 0.0 1
(BJ409463) Dictyostelium discoideum cDNA clone:dds41l21, 3' ... 412 0.0 6
(BJ409400) Dictyostelium discoideum cDNA clone:dds41e15, 3' ... 420 0.0 5
(BJ349867) Dictyostelium discoideum cDNA clone:dda37l20, 3' ... 648 0.0 1
(AU266937) Dictyostelium discoideum vegetative cDNA clone:VS... 420 e-175 2
(BJ384600) Dictyostelium discoideum cDNA clone:ddc50e05, 3' ... 597 e-175 2
(BJ395373) Dictyostelium discoideum cDNA clone:dds38k16, 5' ... 620 e-172 1
(AU268225) Dictyostelium discoideum vegetative cDNA clone:VS... 420 e-171 4
(BJ396147) Dictyostelium discoideum cDNA clone:dds41e15, 5' ... 615 e-171 1
(U63593) Dictyostelium discoideum Tdd-4 transposable element... 609 e-169 1
(AU268226) Dictyostelium discoideum vegetative cDNA clone:VS... 420 e-162 2
(BJ409338) Dictyostelium discoideum cDNA clone:dds41a03, 3' ... 555 e-156 2
(BJ387890) Dictyostelium discoideum cDNA clone:dds5l18, 5' e... 293 e-152 3
(BJ409379) Dictyostelium discoideum cDNA clone:dds41f10, 3' ... 420 e-127 2
(BJ422847) Dictyostelium discoideum cDNA clone:ddv47a08, 5' ... 418 e-112 1
(AF049229) Dictyostelium discoideum LTR-retrotransposon Skip... 208 e-104 3
(AF017047) Dictyostelium discoideum LTR-retrotransposon Skip... 343 e-102 2
(AF017044) Dictyostelium discoideum LTR-retrotransposon Skip... 341 e-102 2
(BJ335906) Dictyostelium discoideum cDNA clone:dda52b02, 5' ... 363 4e-95 1
(AU034930) Dictyostelium discoideum slug cDNA, clone SLE355. 327 8e-95 3
(C94068) Dictyostelium discoideum slug cDNA, clone SSG367. 309 1e-92 2
(AF017046) Dictyostelium discoideum LTR-retrotransposon Skip... 307 9e-86 3
(BJ337707) Dictyostelium discoideum cDNA clone:dda58n09, 5' ... 319 5e-82 1
(AF017045) Dictyostelium discoideum LTR-retrotransposon Skip... 295 2e-81 3
(BJ393985) Dictyostelium discoideum cDNA clone:dds33j12, 5' ... 238 1e-77 2
(AF298624) Dictyostelium discoideum chromosome 2 repeat region. 299 5e-76 1
(AU034331) Dictyostelium discoideum slug cDNA, clone SLC703. 281 1e-70 1
(BJ408772) Dictyostelium discoideum cDNA clone:dds46l20, 3' ... 281 1e-70 1
(BJ445989) Dictyostelium discoideum cDNA clone:ddv61e08, 3' ... 278 2e-69 1
(BJ440638) Dictyostelium discoideum cDNA clone:ddv44e12, 3' ... 278 2e-69 1
(BJ409201) Dictyostelium discoideum cDNA clone:dds39m19, 3' ... 278 2e-69 1
(BJ408022) Dictyostelium discoideum cDNA clone:dds44n12, 3' ... 278 2e-69 1
(BJ352155) Dictyostelium discoideum cDNA clone:dda45g23, 3' ... 278 2e-69 1
(BJ405570) Dictyostelium discoideum cDNA clone:dds32l02, 3' ... 167 5e-52 3
(BJ352521) Dictyostelium discoideum cDNA clone:dda47d03, 3' ... 117 7e-47 4
(AF017043) Dictyostelium discoideum LTR-retrotransposon Skip... 163 5e-43 3
(AF017041) Dictyostelium discoideum LTR-retrotransposon Skip... 163 3e-41 3
(AU267490) Dictyostelium discoideum vegetative cDNA clone:VS... 151 6e-40 3
(AU267513) Dictyostelium discoideum vegetative cDNA clone:VS... 151 3e-38 3
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 151 3e-34 13
(AU267514) Dictyostelium discoideum vegetative cDNA clone:VS... 151 3e-34 3
(AU267491) Dictyostelium discoideum vegetative cDNA clone:VS... 151 3e-34 3
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 147 6e-34 2
(AF017042) Dictyostelium discoideum LTR-retrotransposon Skip... 123 2e-33 4
(BJ417958) Dictyostelium discoideum cDNA clone:ddv31m05, 5' ... 155 2e-32 1
(BJ329146) Dictyostelium discoideum cDNA clone:dda30p21, 5' ... 155 2e-32 1
(BJ395921) Dictyostelium discoideum cDNA clone:dds40n13, 5' ... 147 4e-30 1
(BJ386768) Dictyostelium discoideum cDNA clone:dds10g15, 5' ... 147 4e-30 1
(BJ369345) Dictyostelium discoideum cDNA clone:ddc50o06, 5' ... 147 4e-30 1
(BJ363459) Dictyostelium discoideum cDNA clone:ddc26b24, 5' ... 147 4e-30 1
(BJ362403) Dictyostelium discoideum cDNA clone:ddc21k13, 5' ... 147 4e-30 1
(BJ324024) Dictyostelium discoideum cDNA clone:dda4k09, 5' e... 147 4e-30 1
(BJ419431) Dictyostelium discoideum cDNA clone:ddv36h04, 5' ... 143 7e-29 1
(BJ418157) Dictyostelium discoideum cDNA clone:ddv31h22, 5' ... 143 7e-29 1
(BJ388461) Dictyostelium discoideum cDNA clone:dds9l16, 5' e... 143 7e-29 1
(BJ369199) Dictyostelium discoideum cDNA clone:ddc49n15, 5' ... 143 7e-29 1
(BJ364850) Dictyostelium discoideum cDNA clone:ddc33p05, 5' ... 143 7e-29 1
(BJ364357) Dictyostelium discoideum cDNA clone:ddc31n08, 5' ... 143 7e-29 1
(BJ361110) Dictyostelium discoideum cDNA clone:ddc9l19, 5' e... 143 7e-29 1
(BJ337873) Dictyostelium discoideum cDNA clone:dda59c12, 5' ... 143 7e-29 1
(BJ324315) Dictyostelium discoideum cDNA clone:dda5b19, 5' e... 143 7e-29 1
(BJ323571) Dictyostelium discoideum cDNA clone:dda11a09, 5' ... 143 7e-29 1
(BJ369055) Dictyostelium discoideum cDNA clone:ddc49k05, 5' ... 139 1e-27 1
(BJ424110) Dictyostelium discoideum cDNA clone:ddv51l12, 5' ... 137 4e-27 1
(BJ360103) Dictyostelium discoideum cDNA clone:ddc4d10, 5' e... 137 4e-27 1
(BJ335927) Dictyostelium discoideum cDNA clone:dda52h01, 5' ... 137 4e-27 1
(BJ417571) Dictyostelium discoideum cDNA clone:ddv28e06, 5' ... 135 2e-26 1
(BJ325662) Dictyostelium discoideum cDNA clone:dda1j20, 5' e... 135 2e-26 1
(BJ427449) Dictyostelium discoideum cDNA clone:ddv62p07, 5' ... 131 3e-25 1
(BJ415929) Dictyostelium discoideum cDNA clone:ddv24o05, 5' ... 131 3e-25 1
(BJ327181) Dictyostelium discoideum cDNA clone:dda19c13, 5' ... 131 3e-25 1
(BJ390200) Dictyostelium discoideum cDNA clone:dds21c14, 5' ... 127 4e-24 1
(BJ362439) Dictyostelium discoideum cDNA clone:ddc21d19, 5' ... 127 4e-24 1
(BJ329041) Dictyostelium discoideum cDNA clone:dda30f13, 5' ... 127 4e-24 1
(BJ324538) Dictyostelium discoideum cDNA clone:dda6e22, 5' e... 127 4e-24 1
(BJ338448) Dictyostelium discoideum cDNA clone:dda61f15, 5' ... 123 6e-23 1
(BJ420380) Dictyostelium discoideum cDNA clone:ddv39i04, 5' ... 121 3e-22 1
(BJ416097) Dictyostelium discoideum cDNA clone:ddv24o22, 5' ... 105 2e-17 1
(BJ334298) Dictyostelium discoideum cDNA clone:dda45g23, 5' ... 54 2e-04 2
(BJ362433) Dictyostelium discoideum cDNA clone:ddc21b23, 5' ... 54 2e-04 2
(BJ426846) Dictyostelium discoideum cDNA clone:ddv60n12, 5' ... 60 8e-04 1
(BJ394684) Dictyostelium discoideum cDNA clone:dds36j06, 5' ... 58 0.003 1
(BJ334854) Dictyostelium discoideum cDNA clone:dda48e04, 5' ... 56 0.013 1
(BJ424183) Dictyostelium discoideum cDNA clone:ddv51l15, 5' ... 36 0.040 2
(BJ391451) Dictyostelium discoideum cDNA clone:dds13o24, 5' ... 36 0.040 2
(BJ369303) Dictyostelium discoideum cDNA clone:ddc50e05, 5' ... 36 0.041 2
(CZ430618) OA_BBa0097K16.f OA_BBa Oryza alta genomic clone O... 54 0.050 1
(CZ143441) OA_BBa0040P13.f OA_BBa Oryza alta genomic clone O... 54 0.050 1
(FE095113) LV_GL_RA25D05f Litopenaeus vannamei gills cDNA li... 38 0.30 2
(FE095112) LV_GL_RA25B05r Litopenaeus vannamei gills cDNA li... 38 0.30 2
(ER838072) PPTEY93TR Solanum tuberosum RHPOTKEY BAC ends Sol... 36 0.37 4
(CU416310) Pleurobrachia pileus 5-PRIME EST from clone SQ0AA... 50 0.78 1
(DU831891) KBrS009D05R KBrS, Brassica rapa Sau3AI BAC librar... 42 2.3 2
(AM461229) Vitis vinifera contig VV78X101286.4, whole genome... 38 2.6 2
(AC220944) Pan troglodytes BAC clone CH251-656L19 from chrom... 48 3.1 1
(AC213006) Pan troglodytes BAC clone CH251-68I11 from chromo... 48 3.1 1
(AC073048) Homo sapiens BAC clone RP11-54E21 from 7, complet... 48 3.1 1
(AC080074) Homo sapiens chromosome 7 clone RP11-338F10, WORK... 48 3.1 1
(CZ997995) 187186 Tomato MboI BAC Library Solanum lycopersic... 48 3.1 1
(EG547369) RrLX2a28k02f1 1YR+II Rutilus rutilus cDNA clone 2... 48 3.1 1
(AC155664) Bos taurus clone CH240-31P11, WORKING DRAFT SEQUE... 42 3.5 6
(AC144212) Macaca mulatta clone CH250-270E1, *** SEQUENCING ... 40 5.2 2
(U49829) Caenorhabditis elegans cosmid F27D9, complete seque... 42 6.8 2
(CE124728) tigr-gss-dog-17000325947071 Dog Library Canis lup... 46 7.1 2
(BI251715) 602994217F1 NCI_CGAP_Mam5 Mus musculus cDNA clone... 36 7.5 2
(BV006911) ORS 28 Sunflower strain HA89 lambda ZAP express H... 36 7.6 2
(BZ479865) BONAQ70TF BO_1.6_2_KB_tot Brassica oleracea genom... 36 8.9 2

>(AF049230) Dictyostelium discoideum LTR-retrotransposon Skipper, Gag
(gag) gene, complete cds; and Pro (pro) and Pol (pol)
genes, partial cds.
Length = 6998

Score = 2646 bits (1335), Expect(3) = 0.0
Identities = 1338/1339 (99%)
Strand = Plus / Plus


Query: 2058 cactttctgatgaatcactcaaagaattcaataatctaaagaaagagtttgaaggtgaaa 2117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4314 cactttctgatgaatcactcaaagaattcaataatctaaagaaagagtttgaaggtgaaa 4373


Query: 2118 atattgtcgctattccaattgaacaagataactccataccaatagatatcgaaaaggtta 2177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4374 atattgtcgctattccaattgaacaagataactccataccaatagatatcgaaaaggtta 4433


Query: 2178 aagcatcaacagacatgccaatccattcagataataataatctaaacaatggtagttttc 2237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4434 aagcatcaacagacatgccaatccattcagataataataatctaaacaatggtagttttc 4493


Query: 2238 acttgtattgtgatgttagtgataaagcattatcaggtgtattatatcaaattcaaggta 2297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4494 acttgtattgtgatgttagtgataaagcattatcaggtgtattatatcaaattcaaggta 4553


Query: 2298 ataaattcaaagtcatttggtttcatagtagaaaacttactgatactcaaaagaggtaca 2357
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4554 ataaattcaaagtcatttggtttcattgtagaaaacttactgatactcaaaagaggtaca 4613


Query: 2358 gcataggtgatagagagttcctttcaatcattgattctctaaagaagtttcaacatttat 2417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4614 gcataggtgatagagagttcctttcaatcattgattctctaaagaagtttcaacatttat 4673


Query: 2418 taattggtaaaaaggtttcaatctacactgatcaccaaaatcttacatatattatcaata 2477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4674 taattggtaaaaaggtttcaatctacactgatcaccaaaatcttacatatattatcaata 4733


Query: 2478 agtcaaacgataaaccgttcacaaagagacaagataattatatgaaatatattaaagaat 2537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4734 agtcaaacgataaaccgttcacaaagagacaagataattatatgaaatatattaaagaat 4793


Query: 2538 ttgattatgaattaagacatataagtggtaaaaagaatggtatagctgatttcttatctc 2597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4794 ttgattatgaattaagacatataagtggtaaaaagaatggtatagctgatttcttatctc 4853


Query: 2598 gtaaatatgataatttccaatgggatgaatcgtttttaaataaaattaaggaagaacaaa 2657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4854 gtaaatatgataatttccaatgggatgaatcgtttttaaataaaattaaggaagaacaaa 4913


Query: 2658 tcaattctcaatggctattagagatgaaaaagaatccaaatttatgcattgaagaaatta 2717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4914 tcaattctcaatggctattagagatgaaaaagaatccaaatttatgcattgaagaaatta 4973


Query: 2718 atgatatctgttaccttagtgaagatgggttcaagaaattaatcatcatagataaagaaa 2777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4974 atgatatctgttaccttagtgaagatgggttcaagaaattaatcatcatagataaagaaa 5033


Query: 2778 ctattcataccgtcattagagaatatcacgataccaaatatagtggtcatcacgctttag 2837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5034 ctattcataccgtcattagagaatatcacgataccaaatatagtggtcatcacgctttag 5093


Query: 2838 atatcacatacaataatataagacaagattactatttcaaagaaatgttttctattatca 2897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5094 atatcacatacaataatataagacaagattactatttcaaagaaatgttttctattatca 5153


Query: 2898 agaggtacataaagtcttgtgcaacatgtcaattgaacattaaccgtaaagataatggta 2957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5154 agaggtacataaagtcttgtgcaacatgtcaattgaacattaaccgtaaagataatggta 5213


Query: 2958 tactccaaagtttagaaattccctttgaagtttggagagatatatcaatcgatttcttat 3017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5214 tactccaaagtttagaaattccctttgaagtttggagagatatatcaatcgatttcttat 5273


Query: 3018 cgctaccaaaaacaatgtatgcaataaacggatttacagttgaagtcgatcaagtttgtg 3077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5274 cgctaccaaaaacaatgtatgcaataaacggatttacagttgaagtcgatcaagtttgtg 5333


Query: 3078 tcattgtttgtagattatctaaaatggttcatatagttccatgtcataagacaatagatg 3137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5334 tcattgtttgtagattatctaaaatggttcatatagttccatgtcataagacaatagatg 5393


Query: 3138 cccaacatactgctcaattattgttgaatcatgtgttcagactccatggttatccaagaa 3197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5394 cccaacatactgctcaattattgttgaatcatgtgttcagactccatggttatccaagaa 5453


Query: 3198 caatcgtctccgatagagatccaagattcctttcagaaatatgggagagatgggcaaaga 3257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5454 caatcgtctccgatagagatccaagattcctttcagaaatatgggagagatgggcaaaga 5513


Query: 3258 cgatggattctaaactcaagatgactgtggcacacagagcacaagctgatggtcaaactg 3317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5514 cgatggattctaaactcaagatgactgtggcacacagagcacaagctgatggtcaaactg 5573


Query: 3318 aaagaatgaatagagaaattattagaatattaactaaagcctcaacagagtatggggaga 3377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5574 aaagaatgaatagagaaattattagaatattaactaaagcctcaacagagtatggggaga 5633


Query: 3378 attggtcagatatcattcc 3396
|||||||||||||||||||
Sbjct: 5634 attggtcagatatcattcc 5652

Score = 1473 bits (743), Expect = 0.0
Identities = 755/759 (99%)
Strand = Plus / Plus


Query: 1238 atcataataaagaaagatcaagatgttgaaccaacaaagaaacaaatctattattcaaca 1297
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3494 atcatattaaagaaagatcaagatgttgaaccaacaaagaaacaaatctattattcaaca 3553


Query: 1298 gatgatcataagagacatgtcgaagaaatggttatcaaatttatagatttaggtattatc 1357
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3554 gatgatcataagagacatgtcgaagaaatggttctcaaatttatagatttaggtattatc 3613


Query: 1358 aaaagatcagaatcaaattactcatctccaatcatgttattaaagaagagagattcatgg 1417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3614 aaaagatcagaatcaaattactcatctccaatcatgttattaaagaagagagattcatgg 3673


Query: 1418 cgtgtagtccacgactatcgtcaactaaataaagtcactgttagagacgatcatccattc 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3674 cgtgtagtccacgactatcgtcaactaaataaagtcactgttagagacgatcatccattc 3733


Query: 1478 actccggttgatagtcttttaaatcaatgtaaagattcaaagcttttctcaaagtttgac 1537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3734 actccggttgatagtcttttaaatcaatgtaaagattcaaagcttttctcaaagtttgac 3793


Query: 1538 atgattatgggttatttccaagtgttaattaatccagaacacgcaaagtacaccgctttc 1597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3794 atgattatgggttatttccaagtgttaattaatccagaacacgcaaagtacaccgctttc 3853


Query: 1598 attacacatattggtaaatttgaatatactagaatgccacaaggtttagtcaactctcca 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3854 attacacatattggtaaatttgaatatactagaatgccacaaggtttagtcaactctcca 3913


Query: 1658 tccacattcgccagattgatggtcgaaatatttggaaaaatcaaaagtttattacaatac 1717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3914 tccacattcgccagattgatggtcgaaatatttggaaaaatcaaaagtttattacaatac 3973


Query: 1718 tttgatgatcttttggttcattcaaaactcgactacatggtacatttcattgaaataatt 1777
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3974 tttgatgatcttttggttcattcaaaactcgactacatggtacatttcattgaaatcatt 4033


Query: 1778 agaatgcttctatattgtagaaagtacctattattcatttcaagagaaaagagtgaaatg 1837
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4034 agaatgcttctatattgtagaaagtacctattattcatttcacgagaaaagagtgaaatg 4093


Query: 1838 ttaaagactgaagtagatttccttggtttccacattcataaagatggtatatctccaaga 1897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4094 ttaaagactgaagtagatttccttggtttccacattcataaagatggtatatctccaaga 4153


Query: 1898 gctgcaaaggttagagctatctctgagttacctgaaccaagaaacgccaaagaagctgaa 1957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4154 gctgcaaaggttagagctatctctgagttacctgaaccaagaaacgccaaagaagctgaa 4213


Query: 1958 gctgcattaggtctttttggattcttcaggagacacatt 1996
|||||||||||||||||||||||||||||||||||||||
Sbjct: 4214 gctgcattaggtctttttggattcttcaggagacacatt 4252

Score = 1350 bits (681), Expect(3) = 0.0
Identities = 696/701 (99%)
Strand = Plus / Plus


Query: 3456 ccaaatcgtatatggattcaatccaccaactcccgttaatcatttcaattcattaacaaa 3515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5710 ccaaatcgtatatggattcaatccaccaactcccgttaatcatttcaattcattaacaaa 5769


Query: 3516 gactcgtataccaatgagcaacatcaaaaagattgtccgtgataatatactagatgctca 3575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5770 gactcgtataccaatgagcaacatcaaaaagattgtccgtgataatatactagatgctca 5829


Query: 3576 aatcaatgctcaaaagtattacaaccgaggtcgtggtgatgttatcttcgtagtcggaga 3635
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5830 aatcaatgctccaaagtattacaaccgaggtcgtggtgatgttatcttcgtagtcggaga 5889


Query: 3636 aaaggtgatggttaaaagaaaattcttccaaactaatctttcaaaagatctaatctctca 3695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5890 aaaggtgatggttaaaagaaaattcttccaaactaatctttcaaaagatctaatctctca 5949


Query: 3696 caaacttgaatccaagaattgtggaccattcataatcactgccgttcatggtaataatgt 3755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5950 caaacttgaatccaagaattgtggaccattcataatcactgccgttcatggtaataatgt 6009


Query: 3756 aacactcgatttagtaggttatccaaagaaacacaatgtgttcaacaaggatcaaatcgt 3815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6010 aacactcgatttagtaggttatccaaagaaacacaatgtgttcaacaaggatcaaatcgt 6069


Query: 3816 aaaactatacgaggacagtgagtggttaagagaagagatatcgatgcccgaacctgagga 3875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6070 aaaactatacgaggacagtgagtggttaagagaagagatatcgatgcccgaacctgagga 6129


Query: 3876 gatggacgaagcaagttacgaagttgaaagtattctcaatcacgataaagtcaaaaagat 3935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6130 gatggacgaagcaagttacgaagttgaaagtattctcaatcacgataaagtcaaaaagat 6189


Query: 3936 gtacctagtgaagttcaaaggttacccagaacctgaatggatcaaagaagtcgatacaga 3995
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 6190 gtacctagtgaagttcaaaggttacccagaacctgaatggatcagagaagtcgatacaga 6249


Query: 3996 ctgtgaagagttagtcagagagtattggaataacgtgcagaagaaacaattgaactcaag 4055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6250 ctgtgaagagttagtcagagagtattggaataacgtgcagaagaaacaattgaactcaag 6309


Query: 4056 aagagaaagagagaatgtaactacagaagccgttgagccaattgtgtcacctccactctc 4115
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 6310 aagagaaagagagaatgtaactacagaagcagttgagccaattgtgtcacctccactctc 6369


Query: 4116 ccaagaagttcaaagttctcaaacattgcaaccaattactc 4156
| ||||||||||||||||||||||||||||||||||||||
Sbjct: 6370 cacagaagttcaaagttctcaaacattgcaaccaattactc 6410

Score = 557 bits (281), Expect(9) = 0.0
Identities = 284/285 (99%)
Strand = Plus / Plus


Query: 402 tttagtaggttatccaaagaaacacaatgtgttcaacaaggatcaaatcgtaaaactata 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6019 tttagtaggttatccaaagaaacacaatgtgttcaacaaggatcaaatcgtaaaactata 6078


Query: 462 cgaggacagtgagtggttaagagaagagatatcgatgcccgaacctgaggagatggacga 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6079 cgaggacagtgagtggttaagagaagagatatcgatgcccgaacctgaggagatggacga 6138


Query: 522 agcaagttacgaagttgaaagtattctcaatcacgataaagtcaaaaagatgtacctagt 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6139 agcaagttacgaagttgaaagtattctcaatcacgataaagtcaaaaagatgtacctagt 6198


Query: 582 gaagttcaaaggttacccagaacctgaatggatcaaagaagtcgatacagactgtgaaga 641
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6199 gaagttcaaaggttacccagaacctgaatggatcagagaagtcgatacagactgtgaaga 6258


Query: 642 gttagtcagagagtattggaataacgtgcagaagaaacaattgaa 686
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6259 gttagtcagagagtattggaataacgtgcagaagaaacaattgaa 6303

Score = 258 bits (130), Expect(9) = 0.0
Identities = 130/130 (100%)
Strand = Plus / Plus


Query: 271 aaaaggtgatggttaaaagaaaattcttccaaactaatctttcaaaagatctaatctctc 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5889 aaaaggtgatggttaaaagaaaattcttccaaactaatctttcaaaagatctaatctctc 5948


Query: 331 acaaacttgaatccaagaattgtggaccattcataatcactgccgttcatggtaataatg 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5949 acaaacttgaatccaagaattgtggaccattcataatcactgccgttcatggtaataatg 6008


Query: 391 taacactcga 400
||||||||||
Sbjct: 6009 taacactcga 6018

Score = 200 bits (101), Expect(9) = 0.0
Identities = 104/105 (99%)
Strand = Plus / Plus


Query: 1 tatggggagaattggtcagatatcattccacttattgaatttgcaatgaactcatcaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5624 tatggggagaattggtcagatatcattccacttattgaatttgcaatgaactcatcaatg 5683


Query: 61 agcaagtctacaaagatgtcaccattccaaatcgtttatggattc 105
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5684 agcaagtctacaaagatgtcaccattccaaatcgtatatggattc 5728

Score = 143 bits (72), Expect(9) = 0.0
Identities = 72/72 (100%)
Strand = Plus / Plus


Query: 106 caatccaccaactcccgttaatcatttcaattcattaacaaagactcgtataccaatgag 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5728 caatccaccaactcccgttaatcatttcaattcattaacaaagactcgtataccaatgag 5787


Query: 166 caacatcaaaaa 177
||||||||||||
Sbjct: 5788 caacatcaaaaa 5799

Score = 121 bits (61), Expect(3) = 0.0
Identities = 61/61 (100%)
Strand = Plus / Plus


Query: 3396 ccacttattgaatttgcaatgaactcatcaatgagcaagtctacaaagatgtcaccattc 3455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5651 ccacttattgaatttgcaatgaactcatcaatgagcaagtctacaaagatgtcaccattc 5710


Query: 3456 c 3456
|
Sbjct: 5711 c 5711

Score = 121 bits (61), Expect(9) = 0.0
Identities = 64/65 (98%)
Strand = Plus / Plus


Query: 688 ctcaagaagagaaagagagaatgtaactacagaagccgttgagccaattgtgtcacctcc 747
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 6304 ctcaagaagagaaagagagaatgtaactacagaagcagttgagccaattgtgtcacctcc 6363


Query: 748 actct 752
|||||
Sbjct: 6364 actct 6368

Score = 95.6 bits (48), Expect(9) = 0.0
Identities = 51/52 (98%)
Strand = Plus / Plus


Query: 188 gtgataatatactagatgctcaaatcaatgctcaaaagtattacaaccgagg 239
||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5808 gtgataatatactagatgctcaaatcaatgctccaaagtattacaaccgagg 5859

Score = 75.8 bits (38), Expect(9) = 0.0
Identities = 38/38 (100%)
Strand = Plus / Plus


Query: 758 agaagttcaaagttctcaaacattgcaaccaattactc 795
||||||||||||||||||||||||||||||||||||||
Sbjct: 6373 agaagttcaaagttctcaaacattgcaaccaattactc 6410

Score = 69.9 bits (35), Expect(9) = 0.0
Identities = 35/35 (100%)
Strand = Plus / Plus


Query: 239 ggtcgtggtgatgttatcttcgtagtcggagaaaa 273
|||||||||||||||||||||||||||||||||||
Sbjct: 5858 ggtcgtggtgatgttatcttcgtagtcggagaaaa 5892

Score = 28.2 bits (14), Expect(9) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 174 aaaaagattgtccg 187
||||||||||||||
Sbjct: 5795 aaaaagattgtccg 5808

Score = 396 bits (200), Expect(5) = e-151
Identities = 209/212 (98%)
Strand = Plus / Plus


Query: 4225 acttcaagtgaggatgatgaacttgatcttagtttacaaattaaaacaactagatcagga 4284
||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 6479 acttcaagtgatgatgatgaacatgatcttagtttacaaattaaaacaactagatcagga 6538


Query: 4285 agaaaagttacacccaagagtttatagtccacctctgagccatagctagcctaaagaagg 4344
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 6539 agaaaagttacacccaagagtttatagtccacctctgagccatagctggcctaaagaagg 6598


Query: 4345 aaggggaaggtgttagagactcaaaactaaattaatttaaagttagtatgagctcaacaa 4404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6599 aaggggaaggtgttagagactcaaaactaaattaatttaaagttagtatgagctcaacaa 6658


Query: 4405 cgtaacaaattcgcgcatctccatgtaaaaat 4436
||||||||||||||||||||||||||||||||
Sbjct: 6659 cgtaacaaattcgcgcatctccatgtaaaaat 6690

Score = 163 bits (82), Expect(5) = e-151
Identities = 82/82 (100%)
Strand = Plus / Plus


Query: 994 tgttagagactcaaaactaaattaatttaaagttagtatgagctcaacaacgtaacaaat 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgttagagactcaaaactaaattaatttaaagttagtatgagctcaacaacgtaacaaat 60


Query: 1054 tcgcgcatctccatgtaaaaat 1075
||||||||||||||||||||||
Sbjct: 61 tcgcgcatctccatgtaaaaat 82

Score = 42.1 bits (21), Expect(5) = e-151
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 4569 tttcataacgcccttactttt 4589
|||||||||||||||||||||
Sbjct: 6823 tttcataacgcccttactttt 6843

Score = 38.2 bits (19), Expect(5) = e-151
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 1201 ctgatttttcggtttagtt 1219
|||||||||||||||||||
Sbjct: 197 ctgatttttcggtttagtt 215

Score = 30.2 bits (15), Expect(5) = e-151
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 4557 ttttcggtttagttt 4571
|||||||||||||||
Sbjct: 6810 ttttcggtttagttt 6824

Score = 396 bits (200), Expect(2) = e-107
Identities = 209/212 (98%)
Strand = Plus / Plus


Query: 864 acttcaagtgaggatgatgaacttgatcttagtttacaaattaaaacaactagatcagga 923
||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 6479 acttcaagtgatgatgatgaacatgatcttagtttacaaattaaaacaactagatcagga 6538


Query: 924 agaaaagttacacccaagagtttatagtccacctctgagccatagctagcctaaagaagg 983
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 6539 agaaaagttacacccaagagtttatagtccacctctgagccatagctggcctaaagaagg 6598


Query: 984 aaggggaaggtgttagagactcaaaactaaattaatttaaagttagtatgagctcaacaa 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6599 aaggggaaggtgttagagactcaaaactaaattaatttaaagttagtatgagctcaacaa 6658


Query: 1044 cgtaacaaattcgcgcatctccatgtaaaaat 1075
||||||||||||||||||||||||||||||||
Sbjct: 6659 cgtaacaaattcgcgcatctccatgtaaaaat 6690

Score = 38.2 bits (19), Expect(2) = e-107
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 1201 ctgatttttcggtttagtt 1219
|||||||||||||||||||
Sbjct: 6805 ctgatttttcggtttagtt 6823

Score = 163 bits (82), Expect(3) = 2e-38
Identities = 82/82 (100%)
Strand = Plus / Plus


Query: 4355 tgttagagactcaaaactaaattaatttaaagttagtatgagctcaacaacgtaacaaat 4414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgttagagactcaaaactaaattaatttaaagttagtatgagctcaacaacgtaacaaat 60


Query: 4415 tcgcgcatctccatgtaaaaat 4436
||||||||||||||||||||||
Sbjct: 61 tcgcgcatctccatgtaaaaat 82

Score = 42.1 bits (21), Expect(3) = 2e-38
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 4569 tttcataacgcccttactttt 4589
|||||||||||||||||||||
Sbjct: 215 tttcataacgcccttactttt 235

Score = 30.2 bits (15), Expect(3) = 2e-38
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 4557 ttttcggtttagttt 4571
|||||||||||||||
Sbjct: 202 ttttcggtttagttt 216

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 4,915,864,450
Number of extensions: 290923673
Number of successful extensions: 23161331
Number of sequences better than 10.0: 231
Length of query: 4599
Length of database: 101,790,757,118
Length adjustment: 25
Effective length of query: 4574
Effective length of database: 99,238,119,368
Effective search space: 453915157989232
Effective search space used: 453915157989232
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.28
Homology vs Protein
Query= Contig-U16571-1 (Contig-U16571-1Q) /CSM_Contig/Contig-U16571-1Q.Seq.d
(4599 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AF049230_3(AF049230|pid:none) Dictyostelium discoideum LTR-retro... 1459 0.0
AY198186_2(AY198186|pid:none) Saccharomyces paradoxus Ty3-like r... 327 2e-93
(Q99315) RecName: Full=Transposon Ty3-G Gag-Pol polyprotein; Alt... 322 5e-92
M34549_2(M34549|pid:none) Saccharomyces cerevisiae tRNA-Cys gene... 322 5e-92
(Q7LHG5) RecName: Full=Transposon Ty3-I Gag-Pol polyprotein; Alt... 323 2e-91
M23367_2(M23367|pid:none) Saccharomyces cerevisiae TY3-2 complet... 323 2e-91
AF541963_5(AF541963|pid:none) Glycine max cv Williams 82 BAC clo... 339 6e-91
CR382131_591(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 333 3e-89
AJ746250_2(AJ746250|pid:none) Yarrowia lipolytica retrotransposo... 333 3e-89
AB430324_1(AB430324|pid:none) Lotus japonicus Ty3-gypsy LORE2B2 ... 318 2e-88
AB430326_1(AB430326|pid:none) Lotus japonicus Ty3-gypsy LORE2B4 ... 316 2e-88
EU522675_1(EU522675|pid:none) Ananas comosus clone pC17Dea2 retr... 329 5e-88
AB430329_1(AB430329|pid:none) Lotus japonicus Ty3-gypsy LORE2B7 ... 316 9e-88
AB430321_1(AB430321|pid:none) Lotus japonicus Ty3-gypsy LORE2B r... 316 9e-88
AF448416_9(AF448416|pid:none) Zea mays B73 chromosome 9S bz geno... 313 1e-87
AF061282_3(AF061282|pid:none) Sorghum bicolor 22 kDa kafirin clu... 327 3e-87
AB458444_61(AB458444|pid:none) Oryza sativa Indica Group Kasalat... 327 3e-87
CR855171_12(CR855171|pid:none) Oryza sativa (indica cultivar-gro... 310 3e-87
AL606459_9(AL606459|pid:none) Oryza sativa genomic DNA, chromoso... 310 3e-87
AC022352_18(AC022352|pid:none) Genomic Sequence for Oryza sativa... 326 6e-87
CR855068_4(CR855068|pid:none) Oryza sativa genomic DNA, chromoso... 324 2e-86
AC079634_1(AC079634|pid:none) Genomic Sequence for Oryza sativa,... 324 2e-86
CR855217_8(CR855217|pid:none) Oryza sativa (indica cultivar-grou... 323 3e-86
AC137616_13(AC137616|pid:none) Oryza sativa (japonica cultivar-g... 323 3e-86
AL662958_8(AL662958|pid:none) Oryza sativa genomic DNA, chromoso... 323 3e-86
Z46728_15(Z46728|pid:none) S.cerevisiae chromosome IX cosmid 9910. 323 4e-86
AF061282_20(AF061282|pid:none) Sorghum bicolor 22 kDa kafirin cl... 312 5e-86
AB028236_3(AB028236|pid:none) Tricholoma matsutake LTR retroelem... 293 6e-86
AL606682_9(AL606682|pid:none) Oryza sativa genomic DNA, chromoso... 305 8e-86
AC135916_2(AC135916|pid:none) Genomic sequence for Oryza sativa,... 322 1e-85
AC124142_14(AC124142|pid:none) Oryza sativa (japonica cultivar-g... 321 2e-85
AP008213_862(AP008213|pid:none) Oryza sativa (japonica cultivar-... 321 2e-85
AC150244_6(AC150244|pid:none) Medicago truncatula chromosome 7 c... 320 3e-85
AC134044_16(AC134044|pid:none) Oryza sativa (japonica cultivar-g... 320 3e-85
CR855080_1(CR855080|pid:none) Oryza sativa (indica cultivar-grou... 320 4e-85
AC097278_23(AC097278|pid:none) Oryza sativa chromosome 10 BAC OS... 320 4e-85
AL606997_6(AL606997|pid:none) Oryza sativa genomic DNA, chromoso... 319 5e-85
AM481999_2(AM481999|pid:none) Vitis vinifera contig VV78X241394.... 319 5e-85
AC135498_4(AC135498|pid:none) Oryza sativa (japonica cultivar-gr... 319 5e-85
AB458444_60(AB458444|pid:none) Oryza sativa Indica Group Kasalat... 319 7e-85
AC093568_17(AC093568|pid:none) Oryza sativa chromosome 10 clone ... 319 7e-85
AY129008_1(AY129008|pid:none) Zea mays CRM centromeric retrotran... 319 7e-85
CR855060_2(CR855060|pid:none) Oryza sativa genomic DNA, chromoso... 319 7e-85
AL662955_6(AL662955|pid:none) Oryza sativa genomic DNA, chromoso... 318 9e-85
AB033235_1(AB033235|pid:none) Oryza sativa Indica Group gypsy-ty... 318 9e-85
AL662955_10(AL662955|pid:none) Oryza sativa genomic DNA, chromos... 318 9e-85
CR855060_3(CR855060|pid:none) Oryza sativa genomic DNA, chromoso... 318 9e-85
AC093017_8(AC093017|pid:none) Oryza sativa (japonica cultivar-gr... 318 9e-85
AB458444_104(AB458444|pid:none) Oryza sativa Indica Group Kasala... 318 1e-84
AC097446_24(AC097446|pid:none) Oryza sativa (japonica cultivar-g... 318 1e-84
AC090486_5(AC090486|pid:none) Genomic sequence for Oryza sativa... 318 1e-84
AC121365_11(AC121365|pid:none) Oryza sativa (japonica cultivar-g... 318 1e-84
AC130611_13(AC130611|pid:none) Oryza sativa (japonica cultivar-g... 318 1e-84
AL731578_9(AL731578|pid:none) Oryza sativa genomic DNA, chromoso... 318 1e-84
CR855017_1(CR855017|pid:none) Oryza sativa (indica cultivar-grou... 318 2e-84
AL731643_28(AL731643|pid:none) Oryza sativa genomic DNA, chromos... 318 2e-84
AY360388_13(AY360388|pid:none) Oryza sativa (japonica cultivar-g... 318 2e-84
CR855225_5(CR855225|pid:none) Oryza sativa genomic DNA, chromoso... 317 2e-84
CR855056_5(CR855056|pid:none) Oryza sativa genomic DNA, chromoso... 317 2e-84
AB458444_6(AB458444|pid:none) Oryza sativa Indica Group Kasalath... 317 2e-84
AL731581_16(AL731581|pid:none) Oryza sativa genomic DNA, chromos... 317 2e-84
AY360387_1(AY360387|pid:none) Oryza sativa (japonica cultivar-gr... 317 3e-84
AC091749_5(AC091749|pid:none) Oryza sativa chromosome 10 BAC OSJ... 317 3e-84
AY661558_1(AY661558|pid:none) Hordeum vulgare subsp. vulgare eIF... 303 3e-84
CR855110_9(CR855110|pid:none) Oryza sativa genomic DNA, chromoso... 317 3e-84
AC145272_6(AC145272|pid:none) Oryza sativa (japonica cultivar-gr... 317 3e-84
AC051624_1(AC051624|pid:none) Genomic Sequence for Oryza sativa,... 317 3e-84
AC132484_16(AC132484|pid:none) Oryza sativa (japonica cultivar-g... 306 3e-84
CR855077_3(CR855077|pid:none) Oryza sativa (indica cultivar-grou... 316 4e-84
AL662949_3(AL662949|pid:none) Oryza sativa genomic DNA, chromoso... 316 4e-84
AL731595_9(AL731595|pid:none) Oryza sativa genomic DNA, chromoso... 316 4e-84
CR855080_5(CR855080|pid:none) Oryza sativa (indica cultivar-grou... 316 4e-84
AC090486_12(AC090486|pid:none) Genomic sequence for Oryza sativ... 316 4e-84
AC051624_3(AC051624|pid:none) Genomic Sequence for Oryza sativa,... 300 5e-84
AC091735_33(AC091735|pid:none) Genomic sequence for Oryza sativa... 316 6e-84
AY360390_15(AY360390|pid:none) Oryza sativa (japonica cultivar-g... 316 6e-84
CR855153_2(CR855153|pid:none) Oryza sativa genomic DNA, chromoso... 315 8e-84
AC077693_20(AC077693|pid:none) Oryza sativa chromosome 10 BAC OS... 315 8e-84
AC133004_15(AC133004|pid:none) Oryza sativa (japonica cultivar-g... 315 8e-84
AC051624_18(AC051624|pid:none) Genomic Sequence for Oryza sativa... 315 8e-84
AC150788_10(AC150788|pid:none) Oryza sativa (japonica cultivar-g... 315 1e-83
AC150788_9(AC150788|pid:none) Oryza sativa (japonica cultivar-gr... 315 1e-83
AL662951_12(AL662951|pid:none) Oryza sativa genomic DNA, chromos... 315 1e-83
AC097446_13(AC097446|pid:none) Oryza sativa (japonica cultivar-g... 314 2e-83
AL662980_12(AL662980|pid:none) Oryza sativa genomic DNA, chromos... 314 2e-83
AL606691_17(AL606691|pid:none) Oryza sativa genomic DNA, chromos... 314 2e-83
CR855061_4(CR855061|pid:none) Oryza sativa genomic DNA, chromoso... 304 2e-83
CR855028_5(CR855028|pid:none) Oryza sativa genomic DNA, chromoso... 313 3e-83
CR855080_6(CR855080|pid:none) Oryza sativa (indica cultivar-grou... 313 4e-83
AC145273_1(AC145273|pid:none) Oryza sativa (japonica cultivar-gr... 305 4e-83
CR855075_6(CR855075|pid:none) Oryza sativa (indica cultivar-grou... 313 5e-83
AC091732_12(AC091732|pid:none) Oryza sativa (japonica cultivar-g... 313 5e-83
CR855237_3(CR855237|pid:none) Oryza sativa genomic DNA, chromoso... 313 5e-83
AC120985_4(AC120985|pid:none) Oryza sativa (japonica cultivar-gr... 312 6e-83
AL731618_12(AL731618|pid:none) Oryza sativa genomic DNA, chromos... 312 6e-83
AC074282_11(AC074282|pid:none) Oryza sativa (japonica cultivar-g... 312 6e-83
AC137610_10(AC137610|pid:none) Oryza sativa (japonica cultivar-g... 312 8e-83
AC145810_7(AC145810|pid:none) Oryza sativa (japonica cultivar-gr... 312 8e-83
AC147811_19(AC147811|pid:none) Oryza sativa (japonica cultivar-g... 303 1e-82
AL731603_8(AL731603|pid:none) Oryza sativa genomic DNA, chromoso... 311 1e-82
AC119148_2(AC119148|pid:none) Oryza sativa (japonica cultivar-gr... 301 1e-82
AC146338_6(AC146338|pid:none) Oryza sativa (japonica cultivar-gr... 301 2e-82
AL731625_7(AL731625|pid:none) Oryza sativa (japonica cultivar-gr... 302 2e-82
CR855026_1(CR855026|pid:none) Oryza sativa (indica cultivar-grou... 300 2e-82
AC120536_10(AC120536|pid:none) Oryza sativa (japonica cultivar-g... 311 2e-82
CR855062_2(CR855062|pid:none) Oryza sativa genomic DNA, chromoso... 311 2e-82
AC104322_6(AC104322|pid:none) Oryza sativa chromosome 10 BAC OSJ... 302 2e-82
AC135916_12(AC135916|pid:none) Genomic sequence for Oryza sativa... 302 2e-82
AL662974_8(AL662974|pid:none) Oryza sativa genomic DNA, chromoso... 310 2e-82
AP007151_1375(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 310 2e-82
AL662941_9(AL662941|pid:none) Oryza sativa genomic DNA, chromoso... 310 2e-82
AC131968_8(AC131968|pid:none) Oryza sativa (japonica cultivar-gr... 302 3e-82
AL662953_1(AL662953|pid:none) Oryza sativa genomic DNA, chromoso... 298 3e-82
AC137613_7(AC137613|pid:none) Oryza sativa (japonica cultivar-gr... 299 4e-82
AC131966_13(AC131966|pid:none) Oryza sativa (japonica cultivar-g... 303 4e-82
AY830091_2(AY830091|pid:none) Phytophthora infestans gypsy-like ... 310 4e-82
CR855079_4(CR855079|pid:none) Oryza sativa genomic DNA, chromoso... 309 5e-82
AC150190_4(AC150190|pid:none) Oryza sativa (japonica cultivar-gr... 308 9e-82
AC097278_20(AC097278|pid:none) Oryza sativa chromosome 10 BAC OS... 298 1e-81
AC145272_2(AC145272|pid:none) Oryza sativa (japonica cultivar-gr... 300 2e-81
AC136220_5(AC136220|pid:none) Oryza sativa (japonica cultivar-gr... 300 2e-81
AL606605_2(AL606605|pid:none) Oryza sativa genomic DNA, chromoso... 299 2e-81
AL731603_4(AL731603|pid:none) Oryza sativa genomic DNA, chromoso... 299 3e-81
CR855022_1(CR855022|pid:none) Oryza sativa (indica cultivar-grou... 306 4e-81
AC119670_26(AC119670|pid:none) Oryza sativa (japonica cultivar-g... 293 5e-81
CR855045_2(CR855045|pid:none) Oryza sativa (indica cultivar-grou... 306 5e-81
AC091732_8(AC091732|pid:none) Oryza sativa (japonica cultivar-gr... 297 6e-81
AL662936_18(AL662936|pid:none) Oryza sativa genomic DNA, chromos... 298 6e-81
AY040832_1(AY040832|pid:none) Hordeum vulgare Ty3/gypsy retrotra... 305 8e-81
AL731643_21(AL731643|pid:none) Oryza sativa genomic DNA, chromos... 297 1e-80
AC145272_7(AC145272|pid:none) Oryza sativa (japonica cultivar-gr... 298 2e-80
AC137003_9(AC137003|pid:none) Oryza sativa (japonica cultivar-gr... 303 4e-80
DQ365821_2(DQ365821|pid:none) Oryza australiensis transposon Ty3... 303 5e-80
AJ966994_1(AJ966994|pid:none) Lotus corniculatus var. japonicus ... 303 5e-80
AC131968_10(AC131968|pid:none) Oryza sativa (japonica cultivar-g... 302 7e-80
T07863(T07863) probable polyprotein - pineapple retrotransposon ... 302 9e-80
AC104322_8(AC104322|pid:none) Oryza sativa chromosome 10 BAC OSJ... 292 2e-79
AL663012_2(AL663012|pid:none) Oryza sativa genomic DNA, chromoso... 301 2e-79
CR855238_3(CR855238|pid:none) Oryza sativa genomic DNA, chromoso... 300 3e-79
AL731643_22(AL731643|pid:none) Oryza sativa genomic DNA, chromos... 300 3e-79
AF119040_1(AF119040|pid:none) Lycopersicon esculentum haplotype ... 300 3e-79
AL663011_11(AL663011|pid:none) Oryza sativa genomic DNA, chromos... 300 4e-79
AC148360_22(AC148360|pid:none) Medicago truncatula clone mth2-27... 300 4e-79
AM461210_1(AM461210|pid:none) Vitis vinifera contig VV78X271543.... 299 6e-79
AC137747_4(AC137747|pid:none) Oryza sativa (japonica cultivar-gr... 291 7e-79
AC006570_3(AC006570|pid:none) Arabidopsis thaliana chromosome 2 ... 299 7e-79
AL606630_12(AL606630|pid:none) Oryza sativa genomic DNA, chromos... 299 7e-79
AL731643_10(AL731643|pid:none) Oryza sativa genomic DNA, chromos... 298 1e-78
AC105743_20(AC105743|pid:none) Oryza sativa chromosome 3 BAC OSJ... 298 1e-78
AC138199_20(AC138199|pid:none) Medicago truncatula clone mth2-15... 298 1e-78
AC119149_12(AC119149|pid:none) Oryza sativa (japonica cultivar-g... 298 1e-78
CR855237_9(CR855237|pid:none) Oryza sativa genomic DNA, chromoso... 290 2e-78
AM439547_2(AM439547|pid:none) Vitis vinifera contig VV78X109768.... 298 2e-78
AL662937_25(AL662937|pid:none) Oryza sativa genomic DNA, chromos... 298 2e-78
DQ645742_1(DQ645742|pid:none) Phytophthora sojae transposon Gyps... 297 2e-78
AC069473_21(AC069473|pid:none) Arabidopsis thaliana chromosome 3... 297 2e-78
AL731625_11(AL731625|pid:none) Oryza sativa (japonica cultivar-g... 288 5e-78
AL731602_7(AL731602|pid:none) Oryza sativa genomic DNA, chromoso... 296 5e-78
CR855171_10(CR855171|pid:none) Oryza sativa (indica cultivar-gro... 296 5e-78
AM436113_5(AM436113|pid:none) Vitis vinifera contig VV78X033734.... 296 6e-78
AC137747_11(AC137747|pid:none) Oryza sativa (japonica cultivar-g... 296 6e-78
AC147811_20(AC147811|pid:none) Oryza sativa (japonica cultivar-g... 295 8e-78
AC154033_4(AC154033|pid:none) Solanum demissum chromosome 5 clon... 281 1e-77
AL731636_8(AL731636|pid:none) Oryza sativa genomic DNA, chromoso... 295 1e-77
AP008212_1155(AP008212|pid:none) Oryza sativa (japonica cultivar... 288 2e-77
AM474226_1(AM474226|pid:none) Vitis vinifera contig VV78X054870.... 293 3e-77
AC091749_12(AC091749|pid:none) Oryza sativa chromosome 10 BAC OS... 293 5e-77
AF499727_6(AF499727|pid:none) Cucumis melo BAC clone PIT92-60K17... 293 5e-77
AL662937_15(AL662937|pid:none) Oryza sativa genomic DNA, chromos... 293 5e-77
AC119149_3(AC119149|pid:none) Oryza sativa (japonica cultivar-gr... 292 7e-77
AC021892_34(AC021892|pid:none) Genomic sequence for Oryza sativa... 292 7e-77
AB458444_50(AB458444|pid:none) Oryza sativa Indica Group Kasalat... 291 1e-76
CR855207_3(CR855207|pid:none) Oryza sativa genomic DNA, chromoso... 291 2e-76
AC078839_1(AC078839|pid:none) Oryza sativa (japonica cultivar-gr... 290 3e-76
CR380953_301(CR380953|pid:none) Candida glabrata strain CBS138 c... 290 5e-76
AY673967_1(AY673967|pid:none) Candida glabrata transposon LTR-re... 290 5e-76
AC022352_16(AC022352|pid:none) Genomic Sequence for Oryza sativa... 290 5e-76
AC126008_33(AC126008|pid:none) Medicago truncatula clone mth2-13... 289 8e-76
AF051915_2(AF051915|pid:none) Cladosporium fulvum CfT-1 LTR-retr... 288 1e-75
AC149290_9(AC149290|pid:none) Solanum demissum chromosome 5 clon... 288 1e-75
CR855060_5(CR855060|pid:none) Oryza sativa genomic DNA, chromoso... 288 1e-75
AC134047_6(AC134047|pid:none) Oryza sativa (japonica cultivar-gr... 288 1e-75
AC119290_7(AC119290|pid:none) Oryza sativa (japonica cultivar-gr... 288 2e-75
AM476928_2(AM476928|pid:none) Vitis vinifera contig VV78X023854.... 287 2e-75
AC137610_4(AC137610|pid:none) Oryza sativa (japonica cultivar-gr... 286 5e-75
AC134046_23(AC134046|pid:none) Oryza sativa (japonica cultivar-g... 286 5e-75
AL663004_6(AL663004|pid:none) Oryza sativa genomic DNA, chromoso... 286 7e-75
AC021892_20(AC021892|pid:none) Genomic sequence for Oryza sativa... 285 1e-74
AL663004_5(AL663004|pid:none) Oryza sativa genomic DNA, chromoso... 284 2e-74
AC011621_1(AC011621|pid:none) Arabidopsis thaliana chromosome II... 283 4e-74
AC080019_10(AC080019|pid:none) Genomic sequence for Oryza sativa... 281 2e-73
AL662962_13(AL662962|pid:none) Oryza sativa genomic DNA, chromos... 280 3e-73
AC091680_31(AC091680|pid:none) Oryza sativa chromosome 10 BAC OS... 278 1e-72
AL731644_9(AL731644|pid:none) Oryza sativa genomic DNA, chromoso... 267 2e-72
AJ439555_2(AJ439555|pid:none) Saccharomyces exiguus LTR-retrotra... 277 2e-72
AC129718_16(AC129718|pid:none) Oryza sativa (japonica cultivar-g... 277 3e-72
AL606690_14(AL606690|pid:none) Oryza sativa genomic DNA, chromos... 276 4e-72
AP005722_25(AP005722|pid:none) Oryza sativa Japonica Group genom... 276 4e-72
AC092388_12(AC092388|pid:none) Oryza sativa chromosome 10 BAC OS... 267 5e-72
AM446694_2(AM446694|pid:none) Vitis vinifera contig VV78X219773.... 276 5e-72
AF466646_9(AF466646|pid:none) Zea mays putative transposase (Z19... 276 5e-72
AC112208_29(AC112208|pid:none) Oryza sativa (japonica cultivar-g... 274 3e-71
AP008207_1945(AP008207|pid:none) Oryza sativa (japonica cultivar... 273 3e-71
AM477145_2(AM477145|pid:none) Vitis vinifera contig VV78X252996.... 271 4e-71
AC137606_17(AC137606|pid:none) Oryza sativa (japonica cultivar-g... 273 4e-71
AC132489_6(AC132489|pid:none) Oryza sativa (japonica cultivar-gr... 273 4e-71
AC080019_14(AC080019|pid:none) Genomic sequence for Oryza sativa... 272 7e-71
AL663005_17(AL663005|pid:none) Oryza sativa genomic DNA, chromos... 271 1e-70
AL731604_12(AL731604|pid:none) Oryza sativa genomic DNA, chromos... 271 2e-70
AM471078_1(AM471078|pid:none) Vitis vinifera contig VV78X257783.... 270 3e-70
AC146526_16(AC146526|pid:none) Oryza sativa (japonica cultivar-g... 270 5e-70
AC068924_24(AC068924|pid:none) Oryza sativa chromosome 10 BAC OS... 264 9e-70
AF264028_2(AF264028|pid:none) Colletotrichum gloeosporioides aut... 268 2e-69
(Q05654) RecName: Full=Retrotransposable element Tf2 155 kDa pro... 267 2e-69
AL035248_8(AL035248|pid:none) S.pombe chromosome I cosmid c167. 267 2e-69
AL442108_7(AL442108|pid:none) Oryza sativa genomic DNA, chromoso... 266 5e-69
CR855237_6(CR855237|pid:none) Oryza sativa genomic DNA, chromoso... 266 7e-69
(Q9UR07) RecName: Full=Retrotransposable element Tf2 155 kDa pro... 266 7e-69
(Q9C0R2) RecName: Full=Retrotransposable element Tf2 155 kDa pro... 266 7e-69
AC137991_5(AC137991|pid:none) Oryza sativa chromosome 3 BAC OSJN... 264 2e-68
AC137606_15(AC137606|pid:none) Oryza sativa (japonica cultivar-g... 264 3e-68
CR855134_2(CR855134|pid:none) Oryza sativa (indica cultivar-grou... 264 3e-68
AC135503_5(AC135503|pid:none) Oryza sativa (japonica cultivar-gr... 263 3e-68
CR855107_8(CR855107|pid:none) Oryza sativa (indica cultivar-grou... 263 3e-68
AJ864642_1(AJ864642|pid:none) Orpinomyces sp. OUS1 partial putat... 263 5e-68
AC136141_29(AC136141|pid:none) Medicago truncatula clone mth2-12... 248 5e-68
AL662939_17(AL662939|pid:none) Oryza sativa genomic DNA, chromos... 261 1e-67
AC093612_16(AC093612|pid:none) Oryza sativa (japonica cultivar-g... 261 2e-67
AC007789_10(AC007789|pid:none) Oryza sativa BAC OSJNBa0049B20 ge... 261 2e-67
AM468153_1(AM468153|pid:none) Vitis vinifera contig VV78X194966.... 260 4e-67
AC080019_15(AC080019|pid:none) Genomic sequence for Oryza sativa... 260 4e-67
AC098565_11(AC098565|pid:none) Oryza sativa chromosome 10 clone ... 249 4e-67
AC131966_1(AC131966|pid:none) Oryza sativa (japonica cultivar-gr... 249 4e-67
AC092748_33(AC092748|pid:none) Genomic sequence for Oryza sativa... 259 5e-67
L35053_2(L35053|pid:none) Magnaporthe grisea transposon LTR retr... 259 9e-67
AY360387_15(AY360387|pid:none) Oryza sativa (japonica cultivar-g... 258 1e-66
AC091233_22(AC091233|pid:none) Oryza sativa chromosome 3 BAC OSJ... 258 1e-66
AJ000387_3(AJ000387|pid:none) Drosophila melanogaster ZAM retroe... 257 2e-66
A84460(A84460) probable retroelement pol polyprotein [imported] ... 256 4e-66
AL606639_1(AL606639|pid:none) Oryza sativa genomic DNA, chromoso... 254 2e-65
AM432176_2(AM432176|pid:none) Vitis vinifera contig VV78X039936.... 254 2e-65
AC092172_7(AC092172|pid:none) Oryza sativa (japonica cultivar-gr... 253 4e-65
AC135594_6(AC135594|pid:none) Oryza sativa chromosome 3 BAC OSJN... 253 4e-65
AL731586_16(AL731586|pid:none) Oryza sativa (japonica cultivar-g... 253 4e-65
AC135594_30(AC135594|pid:none) Oryza sativa chromosome 3 BAC OSJ... 253 6e-65
AL731594_11(AL731594|pid:none) Oryza sativa genomic DNA, chromos... 253 6e-65
AF458768_1(AF458768|pid:none) Oryza sativa LTR retrotransposon O... 252 1e-64
AC183435_9(AC183435|pid:none) Asparagus officinalis clone 025-10... 251 2e-64
AL663011_12(AL663011|pid:none) Oryza sativa genomic DNA, chromos... 250 3e-64
AC161107_16(AC161107|pid:none) Medicago truncatula clone mth2-19... 249 5e-64
AE017352_52(AE017352|pid:none) Cryptococcus neoformans var. neof... 249 7e-64
AB028613_7(AB028613|pid:none) Arabidopsis thaliana genomic DNA, ... 249 9e-64
AM444891_1(AM444891|pid:none) Vitis vinifera contig VV78X141130.... 248 1e-63
AM440848_1(AM440848|pid:none) Vitis vinifera contig VV78X161940.... 248 1e-63
AC148393_22(AC148393|pid:none) Oryza sativa (japonica cultivar-g... 248 2e-63
AC135957_7(AC135957|pid:none) Oryza sativa (japonica cultivar-gr... 248 2e-63
AC135959_19(AC135959|pid:none) Medicago truncatula clone mth2-26... 248 2e-63
AL731602_9(AL731602|pid:none) Oryza sativa genomic DNA, chromoso... 247 3e-63
AL731602_5(AL731602|pid:none) Oryza sativa genomic DNA, chromoso... 247 3e-63
CU633899_197(CU633899|pid:none) Podospora anserina genomic DNA c... 247 3e-63
AC078944_15(AC078944|pid:none) Genomic Sequence for Oryza sativa... 245 1e-62
AC007534_17(AC007534|pid:none) Genomic sequence for Arabidopsis ... 244 2e-62
AY928610_2(AY928610|pid:none) Drosophila melanogaster chromosome... 244 2e-62
CR855084_1(CR855084|pid:none) Oryza sativa genomic DNA, chromoso... 244 3e-62
AC136519_7(AC136519|pid:none) Oryza sativa (japonica cultivar-gr... 243 4e-62
AL663009_11(AL663009|pid:none) Oryza sativa genomic DNA, chromos... 243 5e-62
AC084218_12(AC084218|pid:none) Oryza sativa (japonica cultivar-g... 240 3e-61
AM477499_3(AM477499|pid:none) Vitis vinifera contig VV78X042069.... 239 5e-61
AM487002_1(AM487002|pid:none) Vitis vinifera contig VV78X106005.... 239 9e-61
AM451829_1(AM451829|pid:none) Vitis vinifera contig VV78X165873.... 238 2e-60
AF030881_2(AF030881|pid:none) Takifugu rubripes sushi-ichi retro... 238 2e-60
AC105743_2(AC105743|pid:none) Oryza sativa chromosome 3 BAC OSJN... 237 3e-60
AM444333_2(AM444333|pid:none) Vitis vinifera contig VV78X133939.... 237 3e-60
AC097446_1(AC097446|pid:none) Oryza sativa (japonica cultivar-gr... 236 5e-60
AC131966_15(AC131966|pid:none) Oryza sativa (japonica cultivar-g... 236 5e-60
CR855059_3(CR855059|pid:none) Oryza sativa (indica cultivar-grou... 234 2e-59
CR855232_10(CR855232|pid:none) Oryza sativa genomic DNA, chromos... 234 2e-59
AL662948_14(AL662948|pid:none) Oryza sativa genomic DNA, chromos... 233 5e-59
AM425409_5(AM425409|pid:none) Vitis vinifera contig VV78X052478.... 232 9e-59
AM426702_2(AM426702|pid:none) Vitis vinifera contig VV78X044649.... 232 1e-58
AC131375_23(AC131375|pid:none) Oryza sativa (japonica cultivar-g... 231 1e-58
AC090714_13(AC090714|pid:none) Oryza sativa chromosome 3 BAC OSJ... 231 2e-58
EF426679_3(EF426679|pid:none) Drosophila ananassae retrotranspos... 229 7e-58
AM434825_2(AM434825|pid:none) Vitis vinifera contig VV78X093963.... 229 9e-58
AY013569_1(AY013569|pid:none) Clonorchis sinensis clone 4 LTR re... 228 2e-57
AM484251_1(AM484251|pid:none) Vitis vinifera contig VV78X248596.... 228 2e-57
AC104712_4(AC104712|pid:none) Oryza sativa (japonica cultivar-gr... 227 3e-57
AM477021_1(AM477021|pid:none) Vitis vinifera contig VV78X255865.... 227 4e-57
DQ444467_1(DQ444467|pid:none) Nosema bombycis retrotransposon Nb... 227 4e-57
DQ408427_2(DQ408427|pid:none) Drosophila buzzatii Isis retrotran... 227 4e-57
AM478165_1(AM478165|pid:none) Vitis vinifera contig VV78X095284.... 227 4e-57
AM464172_2(AM464172|pid:none) Vitis vinifera contig VV78X170761.... 226 6e-57
AM424660_2(AM424660|pid:none) Vitis vinifera contig VV78X086766.... 226 8e-57
AM470947_2(AM470947|pid:none) Vitis vinifera contig VV78X111490.... 226 8e-57
AC091724_19(AC091724|pid:none) Oryza sativa (japonica cultivar-g... 212 1e-56
AC137609_15(AC137609|pid:none) Oryza sativa (japonica cultivar-g... 225 1e-56
AC133004_16(AC133004|pid:none) Oryza sativa (japonica cultivar-g... 225 1e-56
AC137613_6(AC137613|pid:none) Oryza sativa (japonica cultivar-gr... 225 1e-56
AM431414_1(AM431414|pid:none) Vitis vinifera contig VV78X107372.... 225 1e-56
AM445248_2(AM445248|pid:none) Vitis vinifera contig VV78X215774.... 225 1e-56
AM481999_1(AM481999|pid:none) Vitis vinifera contig VV78X241394.... 224 2e-56
AM442294_3(AM442294|pid:none) Vitis vinifera contig VV78X245739.... 224 2e-56
AM474911_2(AM474911|pid:none) Vitis vinifera contig VV78X051397.... 223 4e-56
AL732332_2(AL732332|pid:none) Oryza sativa genomic DNA, chromoso... 204 6e-56
AL731598_6(AL731598|pid:none) Oryza sativa genomic DNA, chromoso... 222 9e-56
AF222049_2(AF222049|pid:none) Drosophila melanogaster Transpac t... 222 9e-56
AM475507_1(AM475507|pid:none) Vitis vinifera contig VV78X235683.... 222 1e-55
AP008213_1128(AP008213|pid:none) Oryza sativa (japonica cultivar... 222 1e-55
AY013565_1(AY013565|pid:none) Clonorchis sinensis clone 52 LTR r... 222 1e-55
AM446832_1(AM446832|pid:none) Vitis vinifera contig VV78X211827.... 221 2e-55
AM454623_2(AM454623|pid:none) Vitis vinifera contig VV78X191095.... 221 3e-55
AM423819_2(AM423819|pid:none) Vitis vinifera contig VV78X084947.... 220 3e-55
AM428474_1(AM428474|pid:none) Vitis vinifera contig VV78X080159.... 220 4e-55
AL731640_11(AL731640|pid:none) Oryza sativa (japonica cultivar-g... 219 7e-55
AM461164_1(AM461164|pid:none) Vitis vinifera contig VV78X258163.... 219 1e-54
AM452225_2(AM452225|pid:none) Vitis vinifera contig VV78X060228.... 219 1e-54
AC149266_11(AC149266|pid:none) Solanum demissum chromosome 5 clo... 218 2e-54
AM478668_1(AM478668|pid:none) Vitis vinifera contig VV78X256863.... 218 2e-54
AF364550_2(AF364550|pid:none) Drosophila melanogaster transposon... 218 2e-54
AM478068_2(AM478068|pid:none) Vitis vinifera contig VV78X183017.... 217 3e-54
AM484516_3(AM484516|pid:none) Vitis vinifera contig VV78X098166.... 217 4e-54
AM427137_3(AM427137|pid:none) Vitis vinifera contig VV78X054303.... 217 4e-54
AL731598_10(AL731598|pid:none) Oryza sativa genomic DNA, chromos... 216 5e-54
AM479061_2(AM479061|pid:none) Vitis vinifera contig VV78X003404.... 216 5e-54
AL663009_10(AL663009|pid:none) Oryza sativa genomic DNA, chromos... 216 5e-54
AM932520_2(AM932520|pid:none) Lubomirskia baicalensis silcatein ... 216 6e-54
AM447668_1(AM447668|pid:none) Vitis vinifera contig VV78X175387.... 216 6e-54
B36329(B36329)hypothetical protein 2 - cabbage looper transposon... 216 6e-54
AM461282_4(AM461282|pid:none) Vitis vinifera contig VV78X151187.... 216 6e-54
CR855040_3(CR855040|pid:none) Oryza sativa genomic DNA, chromoso... 216 8e-54
AM429562_2(AM429562|pid:none) Vitis vinifera contig VV78X055853.... 215 1e-53
AL442118_12(AL442118|pid:none) Oryza sativa genomic DNA, chromos... 215 1e-53
AM473236_3(AM473236|pid:none) Vitis vinifera contig VV78X247839.... 215 1e-53
L23646_13(L23646|pid:none) Caenorhabditis elegans cosmid F44E2, ... 214 2e-53
AJ133521_2(AJ133521|pid:none) Drosophila buzzatii osvaldo retrot... 214 2e-53
AM483682_2(AM483682|pid:none) Vitis vinifera contig VV79X004810.... 214 2e-53
T18572(T18572) gag, pol and env protein precursor - Caenorhabdit... 214 2e-53
DQ985395_2(DQ985395|pid:none) Adineta vaga retrotransposon Juno1... 209 2e-53
AM440494_1(AM440494|pid:none) Vitis vinifera contig VV78X015907.... 214 3e-53
AM486637_1(AM486637|pid:none) Vitis vinifera contig VV78X065665.... 213 4e-53
AM424388_1(AM424388|pid:none) Vitis vinifera contig VV79X000602.... 213 5e-53
AL662944_10(AL662944|pid:none) Oryza sativa genomic DNA, chromos... 213 7e-53
AL663020_6(AL663020|pid:none) Oryza sativa genomic DNA, chromoso... 212 1e-52
AM460814_5(AM460814|pid:none) Vitis vinifera contig VV78X194533.... 212 1e-52
AM440596_2(AM440596|pid:none) Vitis vinifera contig VV78X027473.... 212 1e-52
AF492764_2(AF492764|pid:none) Drosophila melanogaster transposon... 211 2e-52
AM439165_1(AM439165|pid:none) Vitis vinifera contig VV78X102694.... 211 2e-52
T43046(T43046) retrovirus-related pol polyprotein homolog - Medi... 211 2e-52
AM459325_7(AM459325|pid:none) Vitis vinifera contig VV78X088974.... 211 2e-52
AM482401_2(AM482401|pid:none) Vitis vinifera contig VV78X104175.... 211 3e-52
AM429977_1(AM429977|pid:none) Vitis vinifera contig VV78X209205.... 211 3e-52
EF710649_21(EF710649|pid:none) Glyptapanteles flavicoxis clone B... 211 3e-52
AM466213_1(AM466213|pid:none) Vitis vinifera contig VV78X075816.... 210 3e-52
AL731615_12(AL731615|pid:none) Oryza sativa genomic DNA, chromos... 209 6e-52
AC091680_34(AC091680|pid:none) Oryza sativa chromosome 10 BAC OS... 209 6e-52
AM451549_1(AM451549|pid:none) Vitis vinifera contig VV78X083010.... 209 6e-52
AM455686_1(AM455686|pid:none) Vitis vinifera contig VV78X255536.... 209 8e-52
AF541948_2(AF541948|pid:none) Drosophila melanogaster transposon... 209 1e-51
AM469632_1(AM469632|pid:none) Vitis vinifera contig VV78X096591.... 208 1e-51
AM475043_2(AM475043|pid:none) Vitis vinifera contig VV78X132196.... 208 2e-51
AM480920_1(AM480920|pid:none) Vitis vinifera contig VV79X003057.... 207 2e-51
AM465595_2(AM465595|pid:none) Vitis vinifera contig VV78X127309.... 207 3e-51
(Q8I7P9) RecName: Full=Retrovirus-related Pol polyprotein from t... 207 4e-51
AM448094_2(AM448094|pid:none) Vitis vinifera contig VV78X115004.... 206 5e-51
AY050234_1(AY050234|pid:none) Drosophila melanogaster SD02026 fu... 206 5e-51
AM465541_3(AM465541|pid:none) Vitis vinifera contig VV78X081861.... 206 5e-51
AC119149_15(AC119149|pid:none) Oryza sativa (japonica cultivar-g... 206 7e-51
AM489048_4(AM489048|pid:none) Vitis vinifera contig VV78X019039.... 206 7e-51
AC151743_25(AC151743|pid:none) Medicago truncatula clone mth2-25... 206 7e-51
AL731604_18(AL731604|pid:none) Oryza sativa genomic DNA, chromos... 206 9e-51
AM449111_2(AM449111|pid:none) Vitis vinifera contig VV78X139463.... 206 9e-51
AM447355_1(AM447355|pid:none) Vitis vinifera contig VV78X043790.... 205 1e-50
AM443753_3(AM443753|pid:none) Vitis vinifera contig VV78X040989.... 205 1e-50
AC121241_22(AC121241|pid:none) Medicago truncatula clone mth2-4n... 205 1e-50
AM470852_2(AM470852|pid:none) Vitis vinifera contig VV78X249707.... 205 1e-50
AM426812_4(AM426812|pid:none) Vitis vinifera contig VV78X023720.... 204 2e-50
AM423811_3(AM423811|pid:none) Vitis vinifera contig VV78X155349.... 204 2e-50
(P20825) RecName: Full=Retrovirus-related Pol polyprotein from t... 204 3e-50
AP008207_2914(AP008207|pid:none) Oryza sativa (japonica cultivar... 196 4e-50
AC083944_15(AC083944|pid:none) Genomic sequence for Oryza sativa... 203 4e-50
AM425684_1(AM425684|pid:none) Vitis vinifera contig VV78X012679.... 203 4e-50
AM455468_2(AM455468|pid:none) Vitis vinifera contig VV78X156887.... 203 4e-50
CR855120_9(CR855120|pid:none) Oryza sativa (indica cultivar-grou... 203 6e-50
AM486380_1(AM486380|pid:none) Vitis vinifera contig VV78X072871.... 203 6e-50
AM432478_1(AM432478|pid:none) Vitis vinifera contig VV78X235622.... 203 6e-50
AM461146_2(AM461146|pid:none) Vitis vinifera contig VV78X136354.... 203 6e-50
AL731596_19(AL731596|pid:none) Oryza sativa genomic DNA, chromos... 203 6e-50
DQ453964_2(DQ453964|pid:none) Oryza sativa (indica cultivar-grou... 202 9e-50
DQ444465_1(DQ444465|pid:none) Nosema bombycis retrotransposon Nb... 202 1e-49
AM442275_1(AM442275|pid:none) Vitis vinifera contig VV78X083742.... 201 2e-49
AJ009736_2(AJ009736|pid:none) Drosophila melanogaster Idefix ret... 201 2e-49
S02021(S02021)micropia polyprotein - fruit fly (Drosophila melan... 201 2e-49
AM458280_1(AM458280|pid:none) Vitis vinifera contig VV78X159862.... 201 3e-49
AM433639_5(AM433639|pid:none) Vitis vinifera contig VV78X203213.... 201 3e-49
AM453810_1(AM453810|pid:none) Vitis vinifera contig VV78X250948.... 200 4e-49
AM439848_1(AM439848|pid:none) Vitis vinifera contig VV78X085604.... 200 5e-49
AC090488_7(AC090488|pid:none) Genomic sequence for Oryza sativa,... 199 8e-49
AC137615_2(AC137615|pid:none) Genomic sequence for Oryza sativa,... 198 1e-48
AB458444_100(AB458444|pid:none) Oryza sativa Indica Group Kasala... 198 2e-48
AM432907_2(AM432907|pid:none) Vitis vinifera contig VV78X106103.... 198 2e-48
AM482978_1(AM482978|pid:none) Vitis vinifera contig VV78X117964.... 198 2e-48
AF077407_4(AF077407|pid:none) Arabidopsis thaliana BAC F9D12. &... 197 4e-48
DQ444472_1(DQ444472|pid:none) Nosema bombycis retrotransposon Nb... 197 4e-48
AL606634_12(AL606634|pid:none) Oryza sativa genomic DNA, chromos... 197 4e-48
AP008217_1231(AP008217|pid:none) Oryza sativa (japonica cultivar... 196 5e-48
AC123570_18(AC123570|pid:none) Medicago truncatula clone mth2-33... 196 5e-48
AY360392_7(AY360392|pid:none) Oryza sativa (japonica cultivar-gr... 196 7e-48
AB281063_1(AB281063|pid:none) Clonorchis sinensis retrotransposo... 196 9e-48
AM468506_1(AM468506|pid:none) Vitis vinifera contig VV78X270902.... 195 1e-47
AM487528_1(AM487528|pid:none) Vitis vinifera contig VV78X169703.... 195 1e-47
S44816(S44816)F44E2.1 protein - Caenorhabditis elegans 195 2e-47
AM488919_1(AM488919|pid:none) Vitis vinifera contig VV78X144548.... 194 3e-47
CR854995_2(CR854995|pid:none) Oryza sativa (indica cultivar-grou... 193 4e-47
CR854995_1(CR854995|pid:none) Oryza sativa (indica cultivar-grou... 193 4e-47
AY360386_11(AY360386|pid:none) Oryza sativa (japonica cultivar-g... 193 4e-47
AC183436_44(AC183436|pid:none) Asparagus officinalis clone 025-3... 192 1e-46
AM472469_1(AM472469|pid:none) Vitis vinifera contig VV79X000183.... 192 1e-46
AM473153_2(AM473153|pid:none) Vitis vinifera contig VV78X068699.... 192 1e-46
CR855043_9(CR855043|pid:none) Oryza sativa (indica cultivar-grou... 191 2e-46
AC098682_12(AC098682|pid:none) Genomic sequence for Oryza sativa... 191 2e-46
AM469923_2(AM469923|pid:none) Vitis vinifera contig VV78X167224.... 191 3e-46
AM480532_1(AM480532|pid:none) Vitis vinifera contig VV78X105742.... 190 4e-46
AC133005_18(AC133005|pid:none) Oryza sativa (japonica cultivar-g... 190 4e-46
AC080019_8(AC080019|pid:none) Genomic sequence for Oryza sativa,... 190 4e-46
AM430202_4(AM430202|pid:none) Vitis vinifera contig VV78X117241.... 190 5e-46
AM451555_2(AM451555|pid:none) Vitis vinifera contig VV78X265602.... 190 5e-46
AL662968_12(AL662968|pid:none) Oryza sativa genomic DNA, chromos... 188 2e-45
AM461214_2(AM461214|pid:none) Vitis vinifera contig VV78X271542.... 187 2e-45
AP008208_1285(AP008208|pid:none) Oryza sativa (japonica cultivar... 187 2e-45
AM481653_4(AM481653|pid:none) Vitis vinifera contig VV78X045989.... 187 4e-45
AM486465_2(AM486465|pid:none) Vitis vinifera contig VV78X021272.... 186 5e-45
AC137609_6(AC137609|pid:none) Oryza sativa (japonica cultivar-gr... 186 7e-45
AB458444_107(AB458444|pid:none) Oryza sativa Indica Group Kasala... 186 7e-45
AM424945_1(AM424945|pid:none) Vitis vinifera contig VV78X236190.... 186 9e-45
AM470637_1(AM470637|pid:none) Vitis vinifera contig VV78X207247.... 186 9e-45
AL606449_8(AL606449|pid:none) Oryza sativa genomic DNA, chromoso... 185 2e-44
AM448670_1(AM448670|pid:none) Vitis vinifera contig VV78X204350.... 185 2e-44
AM901561_1(AM901561|pid:none) Musa acuminata subsp. malaccensis ... 185 2e-44
AM469115_3(AM469115|pid:none) Vitis vinifera contig VV78X121961.... 184 2e-44
AM437302_2(AM437302|pid:none) Vitis vinifera contig VV78X129225.... 184 3e-44
AM437996_1(AM437996|pid:none) Vitis vinifera contig VV78X084696.... 184 3e-44
AM423679_3(AM423679|pid:none) Vitis vinifera contig VV78X078339.... 183 5e-44
AM477693_3(AM477693|pid:none) Vitis vinifera contig VV78X188466.... 183 6e-44
AM901562_1(AM901562|pid:none) Musa acuminata subsp. malaccensis ... 182 8e-44
X14037_1(X14037|pid:none) D.melanogaster micropia-Dm11 retrotran... 182 8e-44
DQ889228_2(DQ889228|pid:none) Drosophila erecta endogenous virus... 182 8e-44
AC147774_16(AC147774|pid:none) Medicago truncatula chromosome 2 ... 182 1e-43
AC120534_21(AC120534|pid:none) Oryza sativa (japonica cultivar-g... 181 2e-43
AM424189_3(AM424189|pid:none) Vitis vinifera contig VV78X202739.... 181 2e-43
AC120534_22(AC120534|pid:none) Oryza sativa (japonica cultivar-g... 181 2e-43
AM423741_1(AM423741|pid:none) Vitis vinifera contig VV78X027251.... 181 2e-43
AM461172_1(AM461172|pid:none) Vitis vinifera contig VV78X174581.... 181 2e-43
AL606447_14(AL606447|pid:none) Oryza sativa genomic DNA, chromos... 181 2e-43
AC137610_18(AC137610|pid:none) Oryza sativa (japonica cultivar-g... 181 3e-43
X03734_1(X03734|pid:none) D. melanogaster retrotransposon gypsy ... 180 4e-43
AM473449_1(AM473449|pid:none) Vitis vinifera contig VV78X185032.... 180 5e-43
AC152405_45(AC152405|pid:none) Medicago truncatula clone mth2-49... 179 7e-43
AF033821_2(AF033821|pid:none) Drosophila melanogaster gypsy tran... 179 1e-42
AM431020_4(AM431020|pid:none) Vitis vinifera contig VV78X184725.... 179 1e-42
(P10401) RecName: Full=Retrovirus-related Pol polyprotein from t... 179 1e-42
AC097446_22(AC097446|pid:none) Oryza sativa (japonica cultivar-g... 179 1e-42
DQ887186_2(DQ887186|pid:none) Drosophila melanogaster clone B10 ... 178 1e-42
DQ444468_1(DQ444468|pid:none) Nosema bombycis retrotransposon Nb... 178 1e-42
EF591042_2(EF591042|pid:none) Drosophila melanogaster clone 8.1 ... 178 1e-42
DQ887187_2(DQ887187|pid:none) Drosophila melanogaster clone 4.1 ... 178 2e-42
AC007730_14(AC007730|pid:none) Arabidopsis thaliana chromosome 2... 177 4e-42
(P10394) RecName: Full=Retrovirus-related Pol polyprotein from t... 176 6e-42
AY928609_2(AY928609|pid:none) Drosophila melanogaster chromosome... 176 6e-42
AB036885_1(AB036885|pid:none) Tricholoma magnivelare pol gene fo... 176 6e-42
AM487681_1(AM487681|pid:none) Vitis vinifera contig VV78X237309.... 176 7e-42
AC131968_11(AC131968|pid:none) Oryza sativa (japonica cultivar-g... 176 7e-42
EF591043_2(EF591043|pid:none) Drosophila melanogaster clone B18 ... 175 1e-41
AL663002_3(AL663002|pid:none) Oryza sativa genomic DNA, chromoso... 175 1e-41
AB281061_1(AB281061|pid:none) Clonorchis sinensis retrotransposo... 175 2e-41
S70430(S70430)hypothetical protein 4 - fruit fly (Drosophila mel... 175 2e-41
DQ536165_1(DQ536165|pid:none) Populus trichocarpa clone 14213185... 175 2e-41
DQ889229_2(DQ889229|pid:none) Drosophila erecta endogenous virus... 174 2e-41
AY113457_1(AY113457|pid:none) Drosophila melanogaster RE36839 fu... 174 4e-41
AB281065_1(AB281065|pid:none) Clonorchis sinensis retrotransposo... 173 6e-41
AC084766_13(AC084766|pid:none) Oryza sativa chromosome 3 BAC OSJ... 173 6e-41
AP008213_779(AP008213|pid:none) Oryza sativa (japonica cultivar-... 173 6e-41
AM458354_1(AM458354|pid:none) Vitis vinifera contig VV78X269116.... 172 8e-41
BX842604_3(BX842604|pid:none) Oryza sativa genomic DNA, chromoso... 172 1e-40
AM469654_4(AM469654|pid:none) Vitis vinifera contig VV78X072672.... 158 1e-40
U89994_2(U89994|pid:none) Drosophila melanogaster burdock retrot... 172 1e-40
AC158464_30(AC158464|pid:none) Medicago truncatula chromosome 2 ... 172 1e-40
AC146526_18(AC146526|pid:none) Oryza sativa (japonica cultivar-g... 171 3e-40
AP008207_1465(AP008207|pid:none) Oryza sativa (japonica cultivar... 171 3e-40
AM423465_2(AM423465|pid:none) Vitis vinifera contig VV78X128917.... 171 3e-40
AP008208_1169(AP008208|pid:none) Oryza sativa (japonica cultivar... 170 4e-40
AY830138_12(AY830138|pid:none) Ipomoea batatas cultivar Beaurega... 170 4e-40
AB007466_2(AB007466|pid:none) Vicia faba mRNA for reverse transc... 169 9e-40
AM440909_2(AM440909|pid:none) Vitis vinifera contig VV78X052866.... 169 9e-40
AL731599_11(AL731599|pid:none) Oryza sativa genomic DNA, chromos... 169 9e-40
AM440779_2(AM440779|pid:none) Vitis vinifera contig VV78X051669.... 169 1e-39
AM485804_2(AM485804|pid:none) Vitis vinifera contig VV78X120626.... 167 3e-39
BX548042_1(BX548042|pid:none) Zebrafish DNA sequence from clone ... 167 3e-39
AB036886_1(AB036886|pid:none) Tricholoma bakamatsutake pol gene ... 167 4e-39
AM434494_2(AM434494|pid:none) Vitis vinifera contig VV78X089075.... 166 6e-39
AM431146_4(AM431146|pid:none) Vitis vinifera contig VV78X184721.... 166 8e-39

>AF049230_3(AF049230|pid:none) Dictyostelium discoideum
LTR-retrotransposon Skipper, Gag (gag) gene, complete
cds; and Pro (pro) and Pol (pol) genes, partial cds.
&T14598(T14598)
Length = 1116

Score = 1459 bits (3778), Expect = 0.0
Identities = 717/720 (99%), Positives = 719/720 (99%)
Frame = +2

Query: 1238 IIIKKDQDVEPTKKQIYYSTDDHKRHVEEMVIKFIDLGIIKRSESNYSSPIMLLKKRDSW 1417
II+KKDQDVEPTKKQIYYSTDDHKRHVEEMV+KFIDLGIIKRSESNYSSPIMLLKKRDSW
Sbjct: 94 IILKKDQDVEPTKKQIYYSTDDHKRHVEEMVLKFIDLGIIKRSESNYSSPIMLLKKRDSW 153

Query: 1418 RVVHDYRQLNKVTVRDDHPFTPVDSLLNQCKDSKLFSKFDMIMGYFQVLINPEHAKYTAF 1597
RVVHDYRQLNKVTVRDDHPFTPVDSLLNQCKDSKLFSKFDMIMGYFQVLINPEHAKYTAF
Sbjct: 154 RVVHDYRQLNKVTVRDDHPFTPVDSLLNQCKDSKLFSKFDMIMGYFQVLINPEHAKYTAF 213

Query: 1598 ITHIGKFEYTRMPQGLVNSPSTFARLMVEIFGKIKSLLQYFDDLLVHSKLDYMVHFIEII 1777
ITHIGKFEYTRMPQGLVNSPSTFARLMVEIFGKIKSLLQYFDDLLVHSKLDYMVHFIEII
Sbjct: 214 ITHIGKFEYTRMPQGLVNSPSTFARLMVEIFGKIKSLLQYFDDLLVHSKLDYMVHFIEII 273

Query: 1778 RMLLYCRKYLLFISREKSEMLKTEVDFLGFHIHKDGISPRAAKVRAISELPEPRNAKEAE 1957
RMLLYCRKYLLFISREKSEMLKTEVDFLGFHIHKDGISPRAAKVRAISELPEPRNAKEAE
Sbjct: 274 RMLLYCRKYLLFISREKSEMLKTEVDFLGFHIHKDGISPRAAKVRAISELPEPRNAKEAE 333

Query: 1958 AALGLFGFFRRHIENYAEKTYHLSKESKGKNKKTLSDESLKEFNNLKKEFEGENIVAIPI 2137
AALGLFGFFRRHIENYAEKTYHLSKESKGKNKKTLSDESLKEFNNLKKEFEGENIVAIPI
Sbjct: 334 AALGLFGFFRRHIENYAEKTYHLSKESKGKNKKTLSDESLKEFNNLKKEFEGENIVAIPI 393

Query: 2138 EQDNSIPIDIEKVKASTDMPIHSDNNNLNNGSFHLYCDVSDKALSGVLYQIQGNKFKVIW 2317
EQDNSIPIDIEKVKASTDMPIHSDNNNLNNGSFHLYCDVSDKALSGVLYQIQGNKFKVIW
Sbjct: 394 EQDNSIPIDIEKVKASTDMPIHSDNNNLNNGSFHLYCDVSDKALSGVLYQIQGNKFKVIW 453

Query: 2318 FHSRKLTDTQKRYSIGDREFLSIIDSLKKFQHLLIGKKVSIYTDHQNLTYIINKSNDKPF 2497
FH RKLTDTQKRYSIGDREFLSIIDSLKKFQHLLIGKKVSIYTDHQNLTYIINKSNDKPF
Sbjct: 454 FHCRKLTDTQKRYSIGDREFLSIIDSLKKFQHLLIGKKVSIYTDHQNLTYIINKSNDKPF 513

Query: 2498 TKRQDNYMKYIKEFDYELRHISGKKNGIADFLSRKYDNFQWDESFLNKIKEEQINSQWLL 2677
TKRQDNYMKYIKEFDYELRHISGKKNGIADFLSRKYDNFQWDESFLNKIKEEQINSQWLL
Sbjct: 514 TKRQDNYMKYIKEFDYELRHISGKKNGIADFLSRKYDNFQWDESFLNKIKEEQINSQWLL 573

Query: 2678 EMKKNPNLCIEEINDICYLSEDGFKKLIIIDKETIHTVIREYHDTKYSGHHALDITYNNI 2857
EMKKNPNLCIEEINDICYLSEDGFKKLIIIDKETIHTVIREYHDTKYSGHHALDITYNNI
Sbjct: 574 EMKKNPNLCIEEINDICYLSEDGFKKLIIIDKETIHTVIREYHDTKYSGHHALDITYNNI 633

Query: 2858 RQDYYFKEMFSIIKRYIKSCATCQLNINRKDNGILQSLEIPFEVWRDISIDFLSLPKTMY 3037
RQDYYFKEMFSIIKRYIKSCATCQLNINRKDNGILQSLEIPFEVWRDISIDFLSLPKTMY
Sbjct: 634 RQDYYFKEMFSIIKRYIKSCATCQLNINRKDNGILQSLEIPFEVWRDISIDFLSLPKTMY 693

Query: 3038 AINGFTVEVDQVCVIVCRLSKMVHIVPCHKTIDAQHTAQLLLNHVFRLHGYPRTIVSDRD 3217
AINGFTVEVDQVCVIVCRLSKMVHIVPCHKTIDAQHTAQLLLNHVFRLHGYPRTIVSDRD
Sbjct: 694 AINGFTVEVDQVCVIVCRLSKMVHIVPCHKTIDAQHTAQLLLNHVFRLHGYPRTIVSDRD 753

Query: 3218 PRFLSEIWERWAKTMDSKLKMTVAHRAQADGQTERMNREIIRILTKASTEYGENWSDIIP 3397
PRFLSEIWERWAKTMDSKLKMTVAHRAQADGQTERMNREIIRILTKASTEYGENWSDIIP
Sbjct: 754 PRFLSEIWERWAKTMDSKLKMTVAHRAQADGQTERMNREIIRILTKASTEYGENWSDIIP 813

Score = 533 bits (1374), Expect = e-149
Identities = 266/284 (93%), Positives = 268/284 (94%)
Frame = +1

Query: 3457 QIVYGFNPPTPVNHFNSLTKTRIPMSNIKKIVRDNILDAQINAQKYYNRGRGDVIFVVGE 3636
QIVYGFNPPTPVNHFNSLTKTRIPMSNIKKIVRDNILDAQINA KYYNRGRGDVIFVVGE
Sbjct: 833 QIVYGFNPPTPVNHFNSLTKTRIPMSNIKKIVRDNILDAQINAPKYYNRGRGDVIFVVGE 892

Query: 3637 KVMVKRKFFQTNLSKDLISHKLESKNCGPFIITAVHGNNVTLDLVGYPKKHNVFNKDQIV 3816
KVMVKRKFFQTNLSKDLISHKLESKNCGPFIITAVHGNNVTLDLVGYPKKHNVFNKDQIV
Sbjct: 893 KVMVKRKFFQTNLSKDLISHKLESKNCGPFIITAVHGNNVTLDLVGYPKKHNVFNKDQIV 952

Query: 3817 KLYEDSEWLREEISMPEPEEMDEASYEVESILNHDKVKKMYLVKFKGYPEPEWIKEVDTD 3996
KLYEDSEWLREEISMPEPEEMDEASYEVESILNHDKVKKMYLVKFKGYPEPEWI+EVDTD
Sbjct: 953 KLYEDSEWLREEISMPEPEEMDEASYEVESILNHDKVKKMYLVKFKGYPEPEWIREVDTD 1012

Query: 3997 CEELVREYWNNVQKKQLNSRRERENVTTEAVEPIVSPPLSQEVQSSQTLQPITPXXXXXX 4176
CEELVREYWNNVQKKQLNSRRERENVTTEAVEPIVSPPLS EVQSSQTLQPITP
Sbjct: 1013 CEELVREYWNNVQKKQLNSRRERENVTTEAVEPIVSPPLSTEVQSSQTLQPITPRQQNSI 1072

Query: 4177 XXXXXXXKKRKSRNQNTSSEDDELDLSLQIKTTRSGRKVTPKSL 4308
KKRKSRNQNTSS+DDE DLSLQIKTTRSGRKVTPKSL
Sbjct: 1073 SNQRNQSKKRKSRNQNTSSDDDEHDLSLQIKTTRSGRKVTPKSL 1116

Score = 252 bits (644), Expect(3) = 2e-88
Identities = 138/230 (60%), Positives = 155/230 (67%), Gaps = 9/230 (3%)
Frame = +1

Query: 1 YGENWSDIIPLIEFAMNXXXXXXXXXXPFQIVYGFQSTNSR*SFQFINKDSYTNEQHQKR 180
YGENWSDIIPLIEFAMN PFQIVYGF F + K + K+
Sbjct: 804 YGENWSDIIPLIEFAMNSSMSKSTKMSPFQIVYGFNPPTPVNHFNSLTKTRIPMS-NIKK 862

Query: 181 LSGDNILDAQINAQKYYNRGSW*CYLRSRRKR*WLKENSSKLIFQKI*SLTNLNPRIVDH 360
+ DNILDAQINA KYYNRG + + K++ ++ TNL+ ++ H
Sbjct: 863 IVRDNILDAQINAPKYYNRG----------RGDVIFVVGEKVMVKRKFFQTNLSKDLISH 912

Query: 361 S*SL----PFMVIM*HSS-----LVGYPKKHNVFNKDQIVKLYEDSEWLREEISMPEPEE 513
PF++ H + LVGYPKKHNVFNKDQIVKLYEDSEWLREEISMPEPEE
Sbjct: 913 KLESKNCGPFIITAVHGNNVTLDLVGYPKKHNVFNKDQIVKLYEDSEWLREEISMPEPEE 972

Query: 514 MDEASYEVESILNHDKVKKMYLVKFKGYPEPEWIKEVDTDCEELVREYWN 663
MDEASYEVESILNHDKVKKMYLVKFKGYPEPEWI+EVDTDCEELVREYWN
Sbjct: 973 MDEASYEVESILNHDKVKKMYLVKFKGYPEPEWIREVDTDCEELVREYWN 1022

Score = 91.3 bits (225), Expect(3) = 2e-88
Identities = 49/65 (75%), Positives = 50/65 (76%)
Frame = +3

Query: 753 SQEVQSSQTLQPITPXXXXXXXXXXXXXKKRKSRNQNTSSEDDELDLSLQIKTTRSGRKV 932
S EVQSSQTLQPITP KKRKSRNQNTSS+DDE DLSLQIKTTRSGRKV
Sbjct: 1052 STEVQSSQTLQPITPRQQNSISNQRNQSKKRKSRNQNTSSDDDEHDLSLQIKTTRSGRKV 1111

Query: 933 TPKSL 947
TPKSL
Sbjct: 1112 TPKSL 1116

Score = 31.2 bits (69), Expect(3) = 2e-88
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2

Query: 710 VTTEAVEPIVSPPL 751
VTTEAVEPIVSPPL
Sbjct: 1038 VTTEAVEPIVSPPL 1051

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 7,012,251,666
Number of extensions: 138108707
Number of successful extensions: 571620
Number of sequences better than 10.0: 51863
Number of HSP's gapped: 401211
Number of HSP's successfully gapped: 53513
Length of query: 1533
Length of database: 1,061,185,681
Length adjustment: 142
Effective length of query: 1391
Effective length of database: 597,066,065
Effective search space: 830518896415
Effective search space used: 830518896415
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.82 gvh: 0.27 alm: 0.33 top: 0.53 tms: 0.00 mit: 0.36 mip: 0.03
nuc: 0.06 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: cytoplasmic
36.0 %: nuclear
20.0 %: mitochondrial
8.0 %: plasma membrane

>> prediction for Contig-U16571-1 is cyt

VS (DIR, S) 2
VH (FL, L) 8
VF (FL, S) 3
AH (FL, L) 14
AF (FL, S) 4
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 6
SF (FL, S) 0
CH (FL, L) 5
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0