>Contig-U16564-1 (Contig-U16564-1Q) /CSM_Contig/Contig-U16564-1Q.Seq.d
GGCTGATTTCAATATTTTCGAATTTCCAAATACTCAACAACACCCACTTT
TATTAATCAAACTTTATAAAAATAAATTCTTTAAACAATTTTAAAATCTG
ACAAAGAATAATTATTATTAAAGAAATAAAAATAAATATAAAATATAGAT
ATTAAAAGAAGAAAAATAAAAATTAAAAAAATTACAAGAGAAAAAGAATA
AAGAACAAAAAAAATCACAAAAATGCAAAACAAAAAAATAGCACATATAG
TAAGAATAGAAATGTTTGAAGAAAAAATAGATAGATTAGATTTAATATTT
ACCAAATATGTAGAATATAAATTTCCTTTATATTTATTAGGACAAATTAT
GGTTATATAAATTTATAAGACGAAAATTTAATTTAATAGGACCTTTAAAT
GAACAAATTTTAAGTCCATATTTACAATTTAATTTATATTTTGATAAATC
GAAAGCCCGAAAGGAAACGTTTAAAGTATATTTAGGAAAAATTGGATTTG
TTTTATTACATGTTTTTTATTTAAGTTGTATTGCATATTATGATAGTTTT
TTATATGCCAAAGTAATGAATGACTGGTTAGAAGAAGTTATGAGAACAAG
ATATTAAAAAAATGATAGGAATAAATAAAATGATTATACAGAGAACAGAG
TTATATACTACAACAGGAGTAGTTAAAAGTACAATCCACGGAAATATTAT
AAATATTTCTTTTAATAGAAACATACAATATCAATATAGACAAATTAGTA
ATAAGAATAAAAATAGGAATTTAAGTCCACGAGTACTTAATTTAAAGGAA
AAGGGCACTGCAAGAGTAACCAAATTAAATAAAAACAGAAAAAAAGGAAT
GAGAGTTGTACAAAAGAAAGATATTTTAAACGCTAAGTTGAATGTACAAA
CACCAATAGTTGTTGAGGAAATTAAAAATATTAGTTTCGCTTCACAAATG
GTACATAAGGAACACGACAATTTACCGACGTTGCGGTCAAAACAACGAAT
GTTATTAAAAGCATATTTTGATCAATTACGAATAAACAATTTAAAGGCTG
TAAATAACATTTTTACATTAAAAAAGAGAGTATTAAATTTAAAAAGCAAT
CATTTAATTGTAACATATAGTCCGAAAGGAACAAAAGTTAATAAGGCTAA
TGTTTTACAACAATTGTTAAAATATAAACAATATTTTACAAAAAAATGGG
CTTTCAAACTAAAAGCGAGAGTTACAAAAACGAACTTTATAAAAACTCAA
ATAGCGCTGGAAAAGCAAAAAGTACGAAATATCGCACAGCCATGTTATAT
TAGTCTTAACCAAAAGATAAATAAAAAATTACAAAAATTACAAAAACAAA
AGTTAGTTCTAACAAGTAAGGCAAAATTACAAAGATTTAAAAAACAAAGA
TATCTGTTTTTAAAAAGCCAAAGTAAATTAGATATAGATTTATTGTTAAT
AGAATTAAAAAAGAAAGCGCGACAATCGAAAATAAAGTACAAACGGCGTA
CAAAAAAAAAGGTTAAAAGTGTGAAGGTTATTGAGGAGTTAAAAGACTTT
GTAGCTCTTGAAGAAGAAATGGAAGCTCATTATAAAACTCCAGTTGAAAC
AATTATGTCATCAATAGTAACAAAATATACTGAAAACGCAAAACCATTAA
TACTAAAAAACTTACAACAAAAATTGCGAGTGAAAGAGTATTTACAGTAC
TCACAAATAAGACGATTAATAGATATAACGAATGAAAAGGAATTATATAA
AAATAAGGAGCTGAGCAAAAGAAATGAAAAAAAACTGAAAAAAAGTATTC
AACAAAAATTTCTTAAAACTGTAGTAATAGCTGTAAATCATAAAAAAAAT
CAACAAAAAGATAGT----------GAATTAATTATTAAAGTATTATTAA
ATATCTTACGAAGAAAAGGTGAAGTACCTTTTGAAGGAAAGATAGATATG
GTATTACCATATTTAAAAGAGTTAGGGAGAAAACAAGACGATGCGAAGAT
GAATAATTTAGCGTTAAATTTACAAATGAGGATCGTAACCGATTTATTAA
ACTATAAAGGTGATACAGAAGTAAAGAACAATCATGTGGCTTTAGTACGT
AAACGAATAGATTATCTAAACTATATGAGTCAAAACCCACGAAGATCACG
AAATGCAGGGCCGAGATCTGATTATAAAGTTATTGGGAAAGCAAAATATC
AGGGAAAAATGATGTATGCTAAATTAACTGAACAAAGAAAGATGTTAGAA
AATGTAGCTCTTAAAAATAATTATAATATATTAAATAATATTATAGAATC
TGAAAAAAAATTATATAAGTTAAGATTAACAAAACAAAGAGTCACAGTAC
CGACCTTATACCAAATATATGAAAGAGTAATAAATCATATAAAAGGATTC
GAAAAAAAAACACAAGGGGTATACTCGAAAGCAAAAAAATTTCAAAATAT
ACTAACAAAACTACAAGCAATAAAAAGAAATAAAAAAGGAACTATAAAA

est1=FC-AC11F,1,597
est2=VSG143F,262,840
est3=VSE770E,272,830
est4=VSG143Z,287,766
est5=FC-AH09F,295,758
est6=FCL-AC07Z,354,831
est7=VSD270E,750,1845
est8=FC-AC11Z,1174,1635
est9=FC-BD16E,1215,1843
est10=FC-IC1578E,1274,1488
est11=FC-AN06Z,1325,1865
est12=FC-AQ13Z,1417,1865
est13=FC-BI19Z,1866,2489
est14=FC-AH09Z,1869,2461

lisifsnfqilnnthfy*snfikinslnnfki*qriiiikeikinikyry*kkknkn*kn
ykrkriknkknhknakqknstysknrnv*rknr*irfniyqicri*isfifirtnygyin
l*denli**dl*mnkf*vhiynliyilinrkperkrlkyi*ekldlfyymffi*vvlhim
ivfympk**mtg*kkl*EQDIKKMIGINKMIIQRTELYTTTGVVKSTIHGNIINISFNRN
IQYQYRQISNKNKNRNLSPRVLNLKEKGTARVTKLNKNRKKGMRVVQKKDILNAKLNVQT
PIVVEEIKNISFASQMVHKEHDNLPTLRSKQRMLLKAYFDQLRINNLKAVNNIFTLKKRV
LNLKSNHLIVTYSPKGTKVNKANVLQQLLKYKQYFTKKWAFKLKARVTKTNFIKTQIALE
KQKVRNIAQPCYISLNQKINKKLQKLQKQKLVLTSKAKLQRFKKQRYLFLKSQSKLDIDL
LLIELKKKARQSKIKYKRRTKKKVKSVKVIEELKDFVALEEEMEAHYKTPVETIMSSIVT
KYTENAKPLILKNLQQKLRVKEYLQYSQIRRLIDITNEKELYKNKELSKRNEKKLKKSIQ
QKFLKTVVIAVNHKKNQQKDS---

---ELIIKVLLNILRRKGEVPFEGKIDMVLPYLKELGRKQDDAKMNNLALNLQMRIVTDL
LNYKGDTEVKNNHVALVRKRIDYLNYMSQNPRRSRNAGPRSDYKVIGKAKYQGKMMYAKL
TEQRKMLENVALKNNYNILNNIIESEKKLYKLRLTKQRVTVPTLYQIYERVINHIKGFEK
KTQGVYSKAKKFQNILTKLQAIKRNKKGTIK

Frame A:
g*fqyfriskysttptfinqtl*k*il*tilksdke*lllkk*k*i*nidikrrkikikk
itreke*rtkkitkmqnkkiahivriemfeekidrldliftkyveykfplyllgqimvi*
iyktki*fnrtfk*tnfksifti*fif**iespkgnv*sifrknwicfitcflfklycil
**fficqsne*lvrrsyenkilkk**e*ik*lyreqsyilqqe*lkvqsteil*ifllie
tyninidklvirikigi*vheyli*rkralqe*pn*iktekke*elykrkif*tls*myk
hq*llrklkilvslhkwyirnttiyrrcgqnnecy*khilinye*ti*rl*itflh*kre
y*i*kaii*l*hivrkeqklirlmfynnc*ninnilqknglsn*krelqkrtl*klk*rw
kskkyeishshvilvltkr*iknyknyknks*f*qvrqnykdlknkdicf*kakvn*i*i
yc**n*krkrdnrk*stngvqkkrlkv*rllrs*ktl*llkkkwkliiklqlkqlchq**
qnilktqnh*y*ktynknce*ksiysthk*dd**i*rmkrnyikirs*akemkkn*kkvf
nknflkl***l*iikkinkki---

---ELIIKVLLNILRRKGEVPFEGKIDMVLPYLKELGRKQDDAKMNNLALNLQMRIVTDL
LNYKGDTEVKNNHVALVRKRIDYLNYMSQNPRRSRNAGPRSDYKVIGKAKYQGKMMYAKL
TEQRKMLENVALKNNYNILNNIIESEKKLYKLRLTKQRVTVPTLYQIYERVINHIKGFEK
KTQGVYSKAKKFQNILTKLQAIKRNKKGTIK

Frame B:
adfnifefpntqqhpllliklyknkffkqf*nltknnyy*rnknkyki*ilkeek*klkk
lqekknkeqkksqkcktkk*hi**e*kclkkk*id*i*ylpnm*ninflyiy*dklwlyk
firrkfnligplneqilspylqfnlyfdkskarketfkvylgkigfvllhvfylsciayy
dsflyakvmndwleevmrtry*kndrnk*ndytenrviyynrss*kynprkyykyff**k
htisi*tn***e*k*efkstst*fkgkghcksnqik*kqkkrnesctkeryfkr*vectn
tnsc*gn*ky*frftngt*gtrqftdvavkttnviksif*sitnkqfkgck*hfyikkes
ikfkkqsfncni*sernks**g*cfttivki*tifykkmgfqtksesyknelyknsnsag
kakstkyrtamly*s*pkdk*kitkitktkvssnk*gkitki*ktkisvfkkpk*iryrf
ivnrikkesatienkvqtaykkkg*kcegy*gvkrlcss*rrngssl*nss*nnyvinsn
kiy*krktintkklttkiaservftvltnktinryne*kgii*k*gaeqkk*kktekkys
tkis*ncsnscks*kkstkr*---

---n*llkyy*isyeekvkyllker*iwyyhi*ks*genktmrr*ii*r*iyk*gs*piy
*tikviqk*rtimwl*yvne*ii*ti*vkthedhemqgrdliikllgkqnirek*cmln*
lnkerc*km*llkiiiiy*iil*nlkknyis*d*qnkesqyrpytkymke**ii*kdskk
khkgytrkqknfkiy*qnykq*keikkel*

Frame C:
lisifsnfqilnnthfy*snfikinslnnfki*qriiiikeikinikyry*kkknkn*kn
ykrkriknkknhknakqknstysknrnv*rknr*irfniyqicri*isfifirtnygyin
l*denli**dl*mnkf*vhiynliyilinrkperkrlkyi*ekldlfyymffi*vvlhim
ivfympk**mtg*kkl*EQDIKKMIGINKMIIQRTELYTTTGVVKSTIHGNIINISFNRN
IQYQYRQISNKNKNRNLSPRVLNLKEKGTARVTKLNKNRKKGMRVVQKKDILNAKLNVQT
PIVVEEIKNISFASQMVHKEHDNLPTLRSKQRMLLKAYFDQLRINNLKAVNNIFTLKKRV
LNLKSNHLIVTYSPKGTKVNKANVLQQLLKYKQYFTKKWAFKLKARVTKTNFIKTQIALE
KQKVRNIAQPCYISLNQKINKKLQKLQKQKLVLTSKAKLQRFKKQRYLFLKSQSKLDIDL
LLIELKKKARQSKIKYKRRTKKKVKSVKVIEELKDFVALEEEMEAHYKTPVETIMSSIVT
KYTENAKPLILKNLQQKLRVKEYLQYSQIRRLIDITNEKELYKNKELSKRNEKKLKKSIQ
QKFLKTVVIAVNHKKNQQKDS---

---iny*siikyltkkr*stf*rkdrygitifkrvrektrrcede*fsvkftnedrnrfi
kl*r*yrskeqscgfst*tnrlsklyeskptkitkcraei*l*syweskisgkndvc*in
*tkkdvrkcss*k*l*yik*yyri*kkii*vkinktkshstdlipni*ksnksykrirkk
ntrgileskkiskytnkttsnkkk*krnyk

Query= Contig-U16564-1 (Contig-U16564-1Q)
/CSM_Contig/Contig-U16564-1Q.Seq.d
         (2499 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U16564-1 (Contig-U16564-1Q) /CSM_Contig/Conti...  1370  0.0
Contig-U16565-1 (Contig-U16565-1Q) /CSM_Contig/Conti...   904  0.0
Contig-U16563-1 (Contig-U16563-1Q) /CSM_Contig/Conti...   200  7e-51
Contig-U04633-1 (Contig-U04633-1Q) /CSM_Contig/Conti...    44  0.001
Contig-U05595-1 (Contig-U05595-1Q) /CSM_Contig/Conti...    40  0.016
Contig-U16207-1 (Contig-U16207-1Q) /CSM_Contig/Conti...    38  0.064
Contig-U15818-1 (Contig-U15818-1Q) /CSM_Contig/Conti...    38  0.064
Contig-U12550-1 (Contig-U12550-1Q) /CSM_Contig/Conti...    38  0.064
Contig-U03199-1 (Contig-U03199-1Q) /CSM_Contig/Conti...    38  0.064
Contig-U00999-1 (Contig-U00999-1Q) /CSM_Contig/Conti...    38  0.064

>Contig-U16564-1 (Contig-U16564-1Q) /CSM_Contig/Contig-U16564-1Q.Seq.d
          Length = 2499

 Score = 1370 bits (691), Expect = 0.0
 Identities = 733/754 (97%)
 Strand = Plus / Plus

                                                                        
Query: 557  gccaaagtaatgaatgactggttagaagaagttatgagaacaagatattnnnnnnntgat 616
            |||||||||||||||||||||||||||||||||||||||||||||||||       ||||
Sbjct: 557  gccaaagtaatgaatgactggttagaagaagttatgagaacaagatattaaaaaaatgat 616

                                                                        
Query: 617  aggaataaataaaatgattatacagagaacagagttatatactacaacaggagtagttaa 676
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617  aggaataaataaaatgattatacagagaacagagttatatactacaacaggagtagttaa 676

                                                                        
Query: 677  aagtacaatccacggaaatattataaatatttcttttaatagaaacatacaatatcaata 736
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677  aagtacaatccacggaaatattataaatatttcttttaatagaaacatacaatatcaata 736

                                                                        
Query: 737  tagacaaattagtaataagaataaaaataggaatttaagtccacgagtacttaatttaaa 796
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737  tagacaaattagtaataagaataaaaataggaatttaagtccacgagtacttaatttaaa 796

                                                                        
Query: 797  ggaaaagggcactgcaagagtaaccaaattaaataaaaacagnnnnnnnggaatgagagt 856
            ||||||||||||||||||||||||||||||||||||||||||       |||||||||||
Sbjct: 797  ggaaaagggcactgcaagagtaaccaaattaaataaaaacagaaaaaaaggaatgagagt 856

                                                                        
Query: 857  tgtacaaaagaaagatattttaaacgctaagttgaatgtacaaacaccaatagttgttga 916
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857  tgtacaaaagaaagatattttaaacgctaagttgaatgtacaaacaccaatagttgttga 916

                                                                        
Query: 917  ggaaattaaaaatattagtttcgcttcacaaatggtacataaggaacacgacaatttacc 976
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917  ggaaattaaaaatattagtttcgcttcacaaatggtacataaggaacacgacaatttacc 976

                                                                        
Query: 977  gacgttgcggtcaaaacaacgaatgttattaaaagcatattttgatcaattacgaataaa 1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977  gacgttgcggtcaaaacaacgaatgttattaaaagcatattttgatcaattacgaataaa 1036

                                                                        
Query: 1037 caatttaaaggctgtaaataacatttttacattaaaaaagagagtattaaatttaaaaag 1096
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 caatttaaaggctgtaaataacatttttacattaaaaaagagagtattaaatttaaaaag 1096

                                                                        
Query: 1097 caatcatttaattgtaacatatagtccgaaaggaacaaaagttaataaggctaatgtttt 1156
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 caatcatttaattgtaacatatagtccgaaaggaacaaaagttaataaggctaatgtttt 1156

                                                                        
Query: 1157 acaacaattgttaaaatataaacaatattttacnnnnnnntgggctttcaaactaaaagc 1216
            |||||||||||||||||||||||||||||||||       ||||||||||||||||||||
Sbjct: 1157 acaacaattgttaaaatataaacaatattttacaaaaaaatgggctttcaaactaaaagc 1216

                                                                        
Query: 1217 gagagttacaaaaacgaactttataaaaactcaaatagcgctggaaaagcaaaaagtacg 1276
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 gagagttacaaaaacgaactttataaaaactcaaatagcgctggaaaagcaaaaagtacg 1276

                                              
Query: 1277 aaatatcgcacagccatgttatattagtcttaac 1310
            ||||||||||||||||||||||||||||||||||
Sbjct: 1277 aaatatcgcacagccatgttatattagtcttaac 1310


 Score = 1057 bits (533), Expect = 0.0
 Identities = 613/638 (96%)
 Strand = Plus / Plus

                                                                        
Query: 1795 gtattcaacaaaaatttcttaaaactgtagtaatagctgtaaatcatnnnnnnnntcaac 1854
            |||||||||||||||||||||||||||||||||||||||||||||||        |||||
Sbjct: 1795 gtattcaacaaaaatttcttaaaactgtagtaatagctgtaaatcataaaaaaaatcaac 1854

                                                                        
Query: 1855 aaaaagatagtnnnnnnnnnngaattaattattaaagtattattaaatatcttacgaaga 1914
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1855 aaaaagatagtnnnnnnnnnngaattaattattaaagtattattaaatatcttacgaaga 1914

                                                                        
Query: 1915 aaaggtgaagtaccttttgaaggaaagatagatatggtattaccatatttaaaagagtta 1974
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1915 aaaggtgaagtaccttttgaaggaaagatagatatggtattaccatatttaaaagagtta 1974

                                                                        
Query: 1975 gggagaaaacaagacgatgcgaagatgaataatttagcgttaaatttacaaatgaggatc 2034
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1975 gggagaaaacaagacgatgcgaagatgaataatttagcgttaaatttacaaatgaggatc 2034

                                                                        
Query: 2035 gtaaccgatttattaaactataaaggtgatacagaagtaaagaacaatcatgtggcttta 2094
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2035 gtaaccgatttattaaactataaaggtgatacagaagtaaagaacaatcatgtggcttta 2094

                                                                        
Query: 2095 gtacgtaaacgaatagattatctaaactatatgagtcaaaacccacgaagatcacgaaat 2154
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2095 gtacgtaaacgaatagattatctaaactatatgagtcaaaacccacgaagatcacgaaat 2154

                                                                        
Query: 2155 gcagggccgagatctgattataaagttattgggaaagcaaaatatcagggaaaaatgatg 2214
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2155 gcagggccgagatctgattataaagttattgggaaagcaaaatatcagggaaaaatgatg 2214

                                                                        
Query: 2215 tatgctaaattaactgaacaaagaaagatgttagaaaatgtagctcttaaaaataattat 2274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2215 tatgctaaattaactgaacaaagaaagatgttagaaaatgtagctcttaaaaataattat 2274

                                                                        
Query: 2275 aatatattaaataatattatagaatctgnnnnnnnnttatataagttaagattaacaaaa 2334
            ||||||||||||||||||||||||||||        ||||||||||||||||||||||||
Sbjct: 2275 aatatattaaataatattatagaatctgaaaaaaaattatataagttaagattaacaaaa 2334

                                                                        
Query: 2335 caaagagtcacagtaccgaccttataccaaatatatgaaagagtaataaatcatataaaa 2394
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2335 caaagagtcacagtaccgaccttataccaaatatatgaaagagtaataaatcatataaaa 2394

                                                  
Query: 2395 ggattcgnnnnnnnnncacaaggggtatactcgaaagc 2432
            |||||||         ||||||||||||||||||||||
Sbjct: 2395 ggattcgaaaaaaaaacacaaggggtatactcgaaagc 2432


 Score =  769 bits (388), Expect = 0.0
 Identities = 406/415 (97%)
 Strand = Plus / Plus

                                                                        
Query: 1352 gttagttctaacaagtaaggcaaaattacaaagatttaaaaaacaaagatatctgttttt 1411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1352 gttagttctaacaagtaaggcaaaattacaaagatttaaaaaacaaagatatctgttttt 1411

                                                                        
Query: 1412 aaaaagccaaagtaaattagatatagatttattgttaatagaattaaaaaagaaagcgcg 1471
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1412 aaaaagccaaagtaaattagatatagatttattgttaatagaattaaaaaagaaagcgcg 1471

                                                                        
Query: 1472 acaatcgaaaataaagtacaaacggcgtacnnnnnnnnnggttaaaagtgtgaaggttat 1531
            ||||||||||||||||||||||||||||||         |||||||||||||||||||||
Sbjct: 1472 acaatcgaaaataaagtacaaacggcgtacaaaaaaaaaggttaaaagtgtgaaggttat 1531

                                                                        
Query: 1532 tgaggagttaaaagactttgtagctcttgaagaagaaatggaagctcattataaaactcc 1591
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1532 tgaggagttaaaagactttgtagctcttgaagaagaaatggaagctcattataaaactcc 1591

                                                                        
Query: 1592 agttgaaacaattatgtcatcaatagtaacaaaatatactgaaaacgcaaaaccattaat 1651
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1592 agttgaaacaattatgtcatcaatagtaacaaaatatactgaaaacgcaaaaccattaat 1651

                                                                        
Query: 1652 actaaaaaacttacaacaaaaattgcgagtgaaagagtatttacagtactcacaaataag 1711
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1652 actaaaaaacttacaacaaaaattgcgagtgaaagagtatttacagtactcacaaataag 1711

                                                                   
Query: 1712 acgattaatagatataacgaatgaaaaggaattatataaaaataaggagctgagc 1766
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1712 acgattaatagatataacgaatgaaaaggaattatataaaaataaggagctgagc 1766


 Score =  507 bits (256), Expect = e-143
 Identities = 256/256 (100%)
 Strand = Plus / Plus

                                                                       
Query: 239 tagcacatatagtaagaatagaaatgtttgaagaaaaaatagatagattagatttaatat 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tagcacatatagtaagaatagaaatgtttgaagaaaaaatagatagattagatttaatat 298

                                                                       
Query: 299 ttaccaaatatgtagaatataaatttcctttatatttattaggacaaattatggttatat 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ttaccaaatatgtagaatataaatttcctttatatttattaggacaaattatggttatat 358

                                                                       
Query: 359 aaatttataagacgaaaatttaatttaataggacctttaaatgaacaaattttaagtcca 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aaatttataagacgaaaatttaatttaataggacctttaaatgaacaaattttaagtcca 418

                                                                       
Query: 419 tatttacaatttaatttatattttgataaatcgaaagcccgaaaggaaacgtttaaagta 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tatttacaatttaatttatattttgataaatcgaaagcccgaaaggaaacgtttaaagta 478

                           
Query: 479 tatttaggaaaaattg 494
           ||||||||||||||||
Sbjct: 479 tatttaggaaaaattg 494


 Score =  200 bits (101), Expect = 7e-51
 Identities = 101/101 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggctgatttcaatattttcgaatttccaaatactcaacaacacccacttttattaatcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggctgatttcaatattttcgaatttccaaatactcaacaacacccacttttattaatcaa 60

                                                    
Query: 61  actttataaaaataaattctttaaacaattttaaaatctga 101
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  actttataaaaataaattctttaaacaattttaaaatctga 101


>Contig-U16565-1 (Contig-U16565-1Q) /CSM_Contig/Contig-U16565-1Q.Seq.d
          Length = 1384

 Score =  904 bits (456), Expect = 0.0
 Identities = 490/507 (96%)
 Strand = Plus / Plus

                                                                        
Query: 1926 accttttgaaggaaagatagatatggtattaccatatttaaaagagttagggagaaaaca 1985
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    accttttgaaggaaagatagatatggtattaccatatttaaaagagttagggagaaaaca 60

                                                                        
Query: 1986 agacgatgcgaagatgaataatttagcgttaaatttacaaatgaggatcgtaaccgattt 2045
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   agacgatgcgaagatgaataatttagcgttaaatttacaaatgaggatcgtaaccgattt 120

                                                                        
Query: 2046 attaaactataaaggtgatacagaagtaaagaacaatcatgtggctttagtacgtaaacg 2105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  attaaactataaaggtgatacagaagtaaagaacaatcatgtggctttagtacgtaaacg 180

                                                                        
Query: 2106 aatagattatctaaactatatgagtcaaaacccacgaagatcacgaaatgcagggccgag 2165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  aatagattatctaaactatatgagtcaaaacccacgaagatcacgaaatgcagggccgag 240

                                                                        
Query: 2166 atctgattataaagttattgggaaagcaaaatatcagggaaaaatgatgtatgctaaatt 2225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  atctgattataaagttattgggaaagcaaaatatcagggaaaaatgatgtatgctaaatt 300

                                                                        
Query: 2226 aactgaacaaagaaagatgttagaaaatgtagctcttaaaaataattataatatattaaa 2285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  aactgaacaaagaaagatgttagaaaatgtagctcttaaaaataattataatatattaaa 360

                                                                        
Query: 2286 taatattatagaatctgnnnnnnnnttatataagttaagattaacaaaacaaagagtcac 2345
            |||||||||||||||||        |||||||||||||||||||||||||||||||||||
Sbjct: 361  taatattatagaatctgaaaaaaaattatataagttaagattaacaaaacaaagagtcac 420

                                                                        
Query: 2346 agtaccgaccttataccaaatatatgaaagagtaataaatcatataaaaggattcgnnnn 2405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct: 421  agtaccgaccttataccaaatatatgaaagagtaataaatcatataaaaggattcgaaaa 480

                                       
Query: 2406 nnnnncacaaggggtatactcgaaagc 2432
                 ||||||||||||||||||||||
Sbjct: 481  aaaaacacaaggggtatactcgaaagc 507


>Contig-U16563-1 (Contig-U16563-1Q) /CSM_Contig/Contig-U16563-1Q.Seq.d
          Length = 1165

 Score =  200 bits (101), Expect = 7e-51
 Identities = 101/101 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggctgatttcaatattttcgaatttccaaatactcaacaacacccacttttattaatcaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971  ggctgatttcaatattttcgaatttccaaatactcaacaacacccacttttattaatcaa 1030

                                                     
Query: 61   actttataaaaataaattctttaaacaattttaaaatctga 101
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 actttataaaaataaattctttaaacaattttaaaatctga 1071


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 51,977
Number of Sequences: 8402
Number of extensions: 51977
Number of successful extensions: 5632
Number of sequences better than 10.0: 213
length of query: 2499
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2482
effective length of database: 7,932,708
effective search space: 19688981256
effective search space used: 19688981256
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)

Query= Contig-U16564-1 (Contig-U16564-1Q) /CSM_Contig/Contig-U16564-1Q.Seq.d
         (2499 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(D63523) Dictyostelium discoideum mitochondrial rpl16, rpl14...   729   0.0    10
(AB000109) Dictyostelium discoideum mitochondrial DNA, compl...   729   0.0    10
(AU263752) Dictyostelium discoideum vegetative cDNA clone:VS...   682   0.0    3
(AU266033) Dictyostelium discoideum vegetative cDNA clone:VS...   442   0.0    4
(AU284727) Dictyostelium discoideum gamete cDNA clone:FC-BI1...   729   0.0    3
(AU263363) Dictyostelium discoideum vegetative cDNA clone:VS...   432   0.0    4
(AU284279) Dictyostelium discoideum gamete cDNA clone:FC-AH0...   726   0.0    3
(AU263753) Dictyostelium discoideum vegetative cDNA clone:VS...   220   0.0    5
(AU285048) Dictyostelium discoideum gamete cDNA clone:FCL-AC...   436   0.0    3
(AU284278) Dictyostelium discoideum gamete cDNA clone:FC-AH0...   301   0.0    4
(AU284576) Dictyostelium discoideum gamete cDNA clone:FC-BD1...   214   0.0    4
(AU284242) Dictyostelium discoideum gamete cDNA clone:FC-AC1...   301   e-179  4
(AU284341) Dictyostelium discoideum gamete cDNA clone:FC-AN0...   214   e-174  5
(AU266034) Dictyostelium discoideum vegetative cDNA clone:VS...   299   e-172  4
(AU284380) Dictyostelium discoideum gamete cDNA clone:FC-AQ1...   214   e-164  5
(AU284243) Dictyostelium discoideum gamete cDNA clone:FC-AC1...   218   e-115  4
(DQ336395) Dictyostelium citrinum mitochondrion, complete ge...   167   e-100  8
(AU271429) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   339   3e-88  1
(AU271428) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   339   3e-88  1
(AU271501) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   293   8e-87  2
(AU271500) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   293   8e-87  2
(AU275098) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   176   1e-53  2
(AU275099) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   176   4e-53  2
(AU266974) Dictyostelium discoideum vegetative cDNA clone:VS...   172   2e-42  3
(AU270670) Dictyostelium discoideum vegetative cDNA clone:VS...   172   3e-42  2
(AU264015) Dictyostelium discoideum vegetative cDNA clone:VS...   129   6e-25  1
(AU271807) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   105   3e-22  2
(AU271808) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   105   5e-21  2
(AU271806) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   105   5e-21  2
(AE014852) Plasmodium falciparum 3D7 chromosome 12, section ...    34   1e-04  16
(AE014846) Plasmodium falciparum 3D7 chromosome 12, section ...    34   0.001  19
(AL844507) Plasmodium falciparum chromosome 8.                     36   0.002  20
(FP015917) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    56   0.007  1
(AL844509) Plasmodium falciparum chromosome 13.                    36   0.009  18
(AE014824) Plasmodium falciparum 3D7 chromosome 14 section 9...    34   0.011  15
(AE014826) Plasmodium falciparum 3D7 chromosome 14 section 1...    34   0.012  21
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    40   0.014  19
(AC005506) Plasmodium falciparum chromosome 12 clone PFYAC35...    34   0.025  17
(FI299222) AdH1145-CPY2-I14TF AdH1 Arachis duranensis genomi...    54   0.027  1
(BX649552) Zebrafish DNA sequence from clone CH211-91I13 in ...    38   0.039  10
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s...    36   0.045  19
(EG551070) MM01E22_RP Sugar Beet germination cDNA library Be...    34   0.055  4
(AF538053) Monosiga brevicollis mitochondrion, complete genome.    34   0.085  12
(AE014851) Plasmodium falciparum 3D7 chromosome 12, section ...    38   0.088  15
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2...    40   0.097  15
(CR382400) Plasmodium falciparum chromosome 6, complete sequ...    34   0.12   22
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8...    30   0.15   19
(AL035476) Plasmodium falciparum MAL4P3.                           36   0.18   17
(AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5...    46   0.19   14
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    40   0.20   15
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    36   0.24   20
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com...    36   0.24   20
(BH556296) BOGMX66TF BOGM Brassica oleracea genomic clone BO...    42   0.27   2
(BH453783) BOGLJ49TR BOGL Brassica oleracea genomic clone BO...    32   0.28   4
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen...    32   0.28   16
(AC004157) Plasmodium falciparum chromosome 12 clone PFYAC29...    32   0.30   14
(AY138498) Plasmodium falciparum normocyte binding protein 2...    34   0.30   8
(AY138499) Plasmodium falciparum normocyte binding protein 2...    34   0.31   8
(AY138497) Plasmodium falciparum normocyte binding protein 2...    34   0.31   8
(AF312916) Plasmodium falciparum reticulocyte binding protei...    34   0.31   8
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g...    32   0.33   16
(AY138496) Plasmodium falciparum 3D7 normocyte binding prote...    34   0.33   8
(AY138502) Plasmodium falciparum normocyte binding protein 2...    34   0.35   8
(AY138503) Plasmodium falciparum normocyte binding protein 2...    34   0.35   8
(AY138500) Plasmodium falciparum 3D7 normocyte binding prote...    34   0.38   8
(AY138501) Plasmodium falciparum normocyte binding protein 2...    34   0.38   8
(AY005149) Plasmodium falciparum reticulocyte binding protei...    34   0.38   8
(EU004203) Saccharomyces cerevisiae YJM789 mitochondrion, co...    32   0.39   13
(AF312917) Plasmodium falciparum reticulocyte binding protei...    34   0.39   8
(EF533289) Oryza sativa (japonica cultivar-group) cultivar K...    50   0.42   1
(EF533288) Oryza sativa (japonica cultivar-group) cultivar Y...    50   0.42   1
(EF533287) Oryza sativa (japonica cultivar-group) cultivar S...    50   0.42   1
(EF533286) Oryza sativa (japonica cultivar-group) cultivar H...    50   0.42   1
(EF533285) Oryza sativa (japonica cultivar-group) cultivar K...    50   0.42   1
(EF533283) Oryza sativa cultivar W1300 RLD20 locus, partial ...    50   0.42   1
(EF533281) Oryza rufipogon ecotype W1956 RLD20 locus, partia...    50   0.42   1
(EF533280) Oryza rufipogon ecotype W108 RLD20 locus, partial...    50   0.42   1
(EF533277) Oryza sativa (indica cultivar-group) cultivar C80...    50   0.42   1
(EF533276) Oryza sativa (indica cultivar-group) cultivar 103...    50   0.42   1
(EF533275) Oryza sativa (indica cultivar-group) cultivar 435...    50   0.42   1
(EF533274) Oryza sativa (indica cultivar-group) cultivar 415...    50   0.42   1
(EF533273) Oryza sativa (indica cultivar-group) cultivar 101...    50   0.42   1
(EF533272) Oryza sativa (indica cultivar-group) cultivar IR3...    50   0.42   1
(EF533271) Oryza rufipogon ecotype W1294 RLD20 locus, partia...    50   0.42   1
(EF533270) Oryza rufipogon ecotype W1236 RLD20 locus, partia...    50   0.42   1
(EF533269) Oryza rufipogon ecotype SN RLD20 locus, partial s...    50   0.42   1
(EF533268) Oryza rufipogon ecotype CB22 RLD20 locus, partial...    50   0.42   1
(EF533267) Oryza rufipogon ecotype YG2A RLD20 locus, partial...    50   0.42   1
(EF533266) Oryza rufipogon ecotype CT55 RLD20 locus, partial...    50   0.42   1
(EF533265) Oryza rufipogon ecotype W1965 RLD20 locus, partia...    50   0.42   1
(EF533264) Oryza rufipogon ecotype W1964 RLD20 locus, partia...    50   0.42   1
(EF533263) Oryza sativa (japonica cultivar-group) cultivar N...    50   0.42   1
(EF533262) Oryza sativa (indica cultivar-group) cultivar Kas...    50   0.42   1
(EF533261) Oryza sativa (japonica cultivar-group) cultivar D...    50   0.42   1
(EF533260) Oryza sativa (japonica cultivar-group) cultivar A...    50   0.42   1
(EF533259) Oryza sativa (japonica cultivar-group) cultivar I...    50   0.42   1
(EF533258) Oryza sativa (japonica cultivar-group) cultivar U...    50   0.42   1
(AP008209) Oryza sativa (japonica cultivar-group) genomic DN...    50   0.42   1
(AC109602) Oryza sativa chromosome 3 BAC OSJNBa0087M10 genom...    50   0.42   1
(AC090874) Oryza sativa chromosome 3 BAC OJ1523_A02 genomic ...    50   0.42   1
(AB260493) Oryza rufipogon DNA, locus RLD20, clone:20SNP99W1...    50   0.42   1
(AB260492) Oryza rufipogon DNA, locus RLD20, clone:20SNP98W1...    50   0.42   1
(AB260491) Oryza rufipogon DNA, locus RLD20, clone:20SNP96W1...    50   0.42   1
(AB260490) Oryza rufipogon DNA, locus RLD20, clone:20SNP91W108.    50   0.42   1
(AB260487) Oryza sativa Indica Group DNA, locus RLD20, clone...    50   0.42   1
(AB260486) Oryza sativa Indica Group DNA, locus RLD20, clone...    50   0.42   1
(AB260485) Oryza sativa Indica Group DNA, locus RLD20, clone...    50   0.42   1
(AB260484) Oryza sativa Indica Group DNA, locus RLD20, clone...    50   0.42   1
(AB260483) Oryza sativa Indica Group DNA, locus RLD20, clone...    50   0.42   1
(AB260482) Oryza sativa Indica Group DNA, locus RLD20, clone...    50   0.42   1
(AB260481) Oryza sativa Japonica Group DNA, locus RLD20, clo...    50   0.42   1
(AB260480) Oryza sativa Indica Group DNA, locus RLD20, clone...    50   0.42   1
(AB260479) Oryza sativa Japonica Group DNA, locus RLD20, clo...    50   0.42   1
(AB260478) Oryza sativa Japonica Group DNA, locus RLD20, clo...    50   0.42   1
(AB260477) Oryza sativa Japonica Group DNA, locus RLD20, clo...    50   0.42   1
(AB260476) Oryza rufipogon DNA, locus RLD20, clone:20SNP375W...    50   0.42   1
(AB260475) Oryza rufipogon DNA, locus RLD20, clone:20SNP374W...    50   0.42   1
(AB260474) Oryza rufipogon DNA, locus RLD20, clone:20SNP369_SN.    50   0.42   1
(AB260473) Oryza rufipogon DNA, locus RLD20, clone:20SNP362_...    50   0.42   1
(AB260472) Oryza rufipogon DNA, locus RLD20, clone:20SNP358_...    50   0.42   1
(AB260471) Oryza rufipogon DNA, locus RLD20, clone:20SNP356_...    50   0.42   1
(AB260470) Oryza sativa Japonica Group DNA, locus RLD20, clo...    50   0.42   1
(AB260469) Oryza sativa Japonica Group DNA, locus RLD20, clo...    50   0.42   1
(AB260468) Oryza sativa Japonica Group DNA, locus RLD20, clo...    50   0.42   1
(AB260467) Oryza sativa Japonica Group DNA, locus RLD20, clo...    50   0.42   1
(AB260466) Oryza sativa Japonica Group DNA, locus RLD20, clo...    50   0.42   1
(AB260465) Oryza sativa Japonica Group DNA, locus RLD20, clo...    50   0.42   1
(AB260463) Oryza meridionalis DNA, locus RLD20, clone:20SNP1...    50   0.42   1
(EA679930) Sequence 58809 from patent US 7365185.                  50   0.42   1
(AC134347) Oryza sativa Japonica Group chromosome 3 clone P0...    50   0.42   1
(AC165753) Bos taurus clone CH240-156G3, *** SEQUENCING IN P...    50   0.42   1
(CZ898108) gz34a02.x1.b.screen Rice methylation filtered lib...    50   0.42   1
(CC193219) CH261-147G24_RM1.1 CH261 Gallus gallus genomic cl...    50   0.42   1
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome.       32   0.45   17
(AC006279) Plasmodium falciparum chromosome 12 clone PFYAC61...    32   0.49   16
(AE014839) Plasmodium falciparum 3D7 chromosome 11 section 4...    38   0.59   16
(AE014838) Plasmodium falciparum 3D7 chromosome 11 section 3...    32   0.59   16
(J01462) Yeast (S.cerevisiae) mitochondrial Ser-tRNA and ATP...    32   0.59   7
(AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3...    38   0.62   17
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8...    38   0.67   15
(CP000939) Clostridium botulinum B1 str. Okra, complete genome.    36   0.67   17
(FH400150) CHO_OF4818xg20f1.ab1 CHO_OF4 Nicotiana tabacum ge...    42   0.86   2
(AC195026) Colobus guereza clone CH272-146D12, WORKING DRAFT...    38   0.88   2
(AC169738) Macaca mulatta clone CH250-12M1, WORKING DRAFT SE...    38   0.88   2
(DD010735) Diagnosis of known genetic Parameters within the ...    38   0.89   16
(EK423303) 1095515642902 Global-Ocean-Sampling_GS-31-01-01-1...    38   1.0    2
(AJ930881) Theileria annulata EST, clone ta0099C10_b.              32   1.1    4
(DV057037) MONTH14_02_B05.x1 FH MONTH14 Mus musculus cDNA cl...    42   1.1    2
(AL049181) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    34   1.1    18
(FB571382) Sequence 249 from Patent EP1865317.                     36   1.2    14
(FB571326) Sequence 193 from Patent EP1865317.                     36   1.2    14
(CR382398) Plasmodium falciparum chromosome 6, complete sequ...    36   1.2    19
(AC079279) Arabidopsis thaliana chromosome 1 BAC F17J6 genom...    34   1.3    11
(AJ010592) Guillardia theta DNA for complete sequence of nuc...    34   1.4    13
(DQ642846) Plasmodium falciparum HB3 apicoplast, complete ge...    32   1.5    8
(AL844506) Plasmodium falciparum chromosome  7.                    38   1.5    19
(EW679298) CE1007F12.b Rhipicephalus (boophilus) microplus B...    34   1.7    3
(AC099712) Mus musculus chromosome 1, clone RP23-400C10, com...    48   1.7    1
(AC098709) Mus musculus BAC clone RP23-1K14 from 1, complete...    48   1.7    1
(AC146264) Pan troglodytes BAC clone RP43-28O13 from chromos...    48   1.7    1
(AC146032) Pan troglodytes BAC clone RP43-14B10 from chromos...    48   1.7    1
(ER841429) POTJP32TF Solanum tuberosum RHPOTKEY BAC ends Sol...    48   1.7    1
(ER810081) PPTBX17TF Solanum tuberosum RHPOTKEY BAC ends Sol...    48   1.7    1
(EK211167) 1095460099663 Global-Ocean-Sampling_GS-31-01-01-1...    48   1.7    1
(CJ445885) Macaca fascicularis mRNA, clone: QflA-11048, 5' e...    48   1.7    1
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ...    36   1.7    16
(DQ927303) Tetrahymena malaccensis strain MP75 mitochondrion...    36   1.7    9
(CU929554) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    38   1.9    8
(EW678877) CE1006C12.g Rhipicephalus (boophilus) microplus B...    34   1.9    3
(EW680154) CE2008D07.b Rhipicephalus (boophilus) microplus B...    34   1.9    3
(EW679937) CE2001A04.b Rhipicephalus (boophilus) microplus B...    34   2.0    3
(AJ011856) Saccharomyces cerevisiae complete mitochondrial g...    32   2.0    11
(EW679251) CE1006C12.b Rhipicephalus (boophilus) microplus B...    34   2.2    3
(CP000727) Clostridium botulinum A str. Hall, complete genome.     34   2.5    17
(DU949233) 213839 Tomato MboI BAC Library Solanum lycopersic...    30   2.5    5
(EW679820) CE1025A07.b Rhipicephalus (boophilus) microplus B...    34   2.5    3
(BX255951) Zebrafish DNA sequence from clone DKEYP-31E5 in l...    42   2.7    6
(AC232482) Brassica rapa subsp. pekinensis clone KBrB038O14,...    34   2.7    10
(ER360532) 1092402561223 Global-Ocean-Sampling_GS-34-01-01-1...    42   2.8    2
(CP000361) Arcobacter butzleri RM4018, complete genome.            36   2.8    23
(ER335087) 1092344298883 Global-Ocean-Sampling_GS-34-01-01-1...    42   3.0    2
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet...    36   3.1    19
(CL332704) CH242_12K8.f CHORI-242 Sus scrofa genomic clone C...    42   3.1    2
(AF291051) Carsonella ruddii cell division protein (gidA) ge...    30   3.2    8
(CP000726) Clostridium botulinum A str. ATCC 19397, complete...    34   3.2    17
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1...    32   3.3    18
(ER590778) 1093016197058 Global-Ocean-Sampling_GS-36-01-01-2...    36   3.3    2
(CT027793) Zebrafish DNA sequence from clone CH211-178H13 in...    34   3.3    2
(CU019638) Zebrafish DNA sequence from clone CH73-242A13 in ...    34   3.3    2
(CT343320) Sus scrofa genomic clone CH242-12K8, genomic surv...    42   3.4    2
(AE014829) Plasmodium falciparum 3D7 chromosome 10 section 1...    34   3.5    14
(AC124226) Mus musculus chromosome 15, clone RP23-94G21, com...    36   3.6    11
(EW679309) CE1008C05.b Rhipicephalus (boophilus) microplus B...    34   3.6    3
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1...    32   3.6    17
(EK500675) 1095505209190 Global-Ocean-Sampling_GS-32-01-01-1...    42   3.7    2
(CR382401) Plasmodium falciparum chromosome 6, complete sequ...    40   3.7    15
(AC149465) Papio anubis clone RP41-465I19, WORKING DRAFT SEQ...    36   3.8    11
(X70810) Euglena gracilis chloroplast complete genome.             32   3.9    12
(AX346421) Sequence 1492 from Patent WO0200928.                    36   3.9    2
(CA195303) SCEZSB1092D12.g SB1 Saccharum officinarum cDNA cl...    42   3.9    3
(CU694877) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   3.9    8
(EJ517596) 1092955107721 Global-Ocean-Sampling_GS-29-01-01-1...    42   4.0    2
(AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7...    46   4.0    14
(AF250284) Amsacta moorei entomopoxvirus, complete genome.         36   4.1    13
(EJ531927) 1092955235781 Global-Ocean-Sampling_GS-29-01-01-1...    42   4.2    2
(EJ974189) 1093022104454 Global-Ocean-Sampling_GS-30-02-01-1...    42   4.3    3
(CU855747) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   4.5    12
(AM459948) Vitis vinifera contig VV79X004819.12, whole genom...    40   4.6    3
(AE002102) Ureaplasma parvum serovar 3 str. ATCC 700970 sect...    36   4.6    4
(FB571303) Sequence 170 from Patent EP1865317.                     34   4.8    11
(AC200632) Pongo abelii BAC clone CH276-232K4 from chromosom...    42   4.9    10
(EJ401187) 1093012039580 Global-Ocean-Sampling_GS-28-01-01-1...    42   4.9    3
(AC192920) Spermophilus tridecemlineatus clone VMRC20-345O7,...    38   5.0    7
(CP000728) Clostridium botulinum F str. Langeland, complete ...    36   5.1    15
(AJ511533) Candida glabrata complete mitochondrial genome.         34   5.1    6
(AC174290) Medicago truncatula clone mth2-52e11, complete se...    36   5.3    8
(EJ472708) 1095403422201 Global-Ocean-Sampling_GS-28-01-01-1...    32   5.3    4
(CU570758) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   6.1    14
(BD460611) Diagnosis of Diseases Associated with Cell Cycle.       34   6.2    7
(BD452533) Diagnosis of Diseases Associated with Cell Cycle.       34   6.2    7
(AX349038) Sequence 496 from Patent WO0202807.                     34   6.2    7
(AX344515) Sequence 362 from Patent WO0200926.                     34   6.2    7
(AX252147) Sequence 408 from Patent WO0168911.                     34   6.2    7
(AB284538) Polistes riparius gene for 16S rRNA, partial sequ...    30   6.4    4
(AX344551) Sequence 2 from Patent WO0200932.                       38   6.6    16
(AL837514) Mouse DNA sequence from clone RP23-152E24 on chro...    46   6.6    1
(AL669816) Mouse DNA sequence from clone RP23-266C4 on chrom...    46   6.6    1
(AC117862) Rattus norvegicus  NOVECTOR CH230-354N15 (Childre...    46   6.6    1
(AC142333) Pan troglodytes BAC clone RP43-32G1 from chromoso...    46   6.6    1
(AM451633) Vitis vinifera, whole genome shotgun sequence, co...    46   6.6    1
(AC165179) Zea mays clone ZMMBBb-37E5, complete sequence.          46   6.6    1
(AC188315) Trichinella spiralis chromosome UNK clone TS195-1...    46   6.6    1
(AC019068) Homo sapiens BAC clone RP11-201F21 from 2, comple...    46   6.6    1
(AC006926) Homo sapiens BAC clone CTA-330P16 from 7, complet...    46   6.6    1
(AC148858) Otolemur garnettii clone CH256-85J20, WORKING DRA...    46   6.6    1
(AC148797) Otolemur garnettii clone CH256-43D13, WORKING DRA...    46   6.6    1
(AC148785) Otolemur garnettii clone CH256-240O7, WORKING DRA...    46   6.6    1
(AC118504) Rattus norvegicus clone CH230-160B11, *** SEQUENC...    46   6.6    1
(AC118394) Rattus norvegicus clone CH230-106B19, *** SEQUENC...    46   6.6    1
(AC110715) Rattus norvegicus clone CH230-155J23, *** SEQUENC...    46   6.6    1
(CU442750) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   6.6    1
(AP008040) Lotus japonicus genomic DNA, chromosome 2, clone:...    46   6.6    1
(AC233915) Zea mays chromosome 5 clone ZMMBBb-237M3; ZMMBBb0...    46   6.6    1
(AC233903) Zea mays chromosome 2 clone ZMMBBb-131L17; ZMMBBb...    46   6.6    1
(AC231193) Zea mays chromosome 2 clone ZMMBBb-643K20; ZMMBBb...    46   6.6    1
(AC229992) Zea mays chromosome 2 clone ZMMBBb-529K1; ZMMBBb0...    46   6.6    1
(AC219953) Bos taurus clone CH240-317O12, WORKING DRAFT SEQU...    46   6.6    1
(AC218437) Bos taurus clone CH240-283K10, WORKING DRAFT SEQU...    46   6.6    1
(AC213778) Zea mays chromosome 2 clone CH201-88E23; ZMMBBc00...    46   6.6    1
(AC213640) Zea mays chromosome 2 clone CH201-447J11; ZMMBBc0...    46   6.6    1
(AC212651) Solanum lycopersicum chromosome 7 clone C07SLm003...    46   6.6    1
(AC203261) Zea mays chromosome 10 clone CH201-120G6; ZMMBBc0...    46   6.6    1
(AC200126) Zea mays chromosome 8 clone CH201-331B2; ZMMBBc03...    46   6.6    1
(AC196034) Zea mays chromosome 5 clone CH201-106D11; ZMMBBc0...    46   6.6    1
(AC195062) Zea mays chromosome 8 clone CH201-119O18; ZMMBBc0...    46   6.6    1
(AC194962) Zea mays chromosome 4 clone ZMMBBb-645K21; ZMMBBb...    46   6.6    1
(AC191078) Zea mays chromosome 6 clone CH201-326P12; ZMMBBc0...    46   6.6    1
(AQ583959) RPCI-11-451I14.TJ RPCI-11 Homo sapiens genomic cl...    46   6.6    1
(ER994912) ZMMBHn0002E20.r ZMMBHn Zea mays genomic clone ZMM...    46   6.6    1
(EK243359) 1095460242785 Global-Ocean-Sampling_GS-31-01-01-1...    46   6.6    1
(EK168993) 1095458066041 Global-Ocean-Sampling_GS-31-01-01-1...    46   6.6    1
(EK049364) 1092959676896 Global-Ocean-Sampling_GS-31-01-01-1...    46   6.6    1
(CZ012610) Tc_32.D01s Exelixis Tribolium castaneum BAC Libra...    46   6.6    1
(CW957185) TcB52.1_F07_T7 Tribolium BAC library Tribolium ca...    46   6.6    1
(CW943663) TcB25.3_C02_T7 Tribolium BAC library Tribolium ca...    46   6.6    1
(CW943485) TcB25.2_C09_T7 Tribolium BAC library Tribolium ca...    46   6.6    1
(CL999729) ZMMBHf0013k04.f ZMMBHf Zea mays genomic clone ZMM...    46   6.6    1
(CG924208) MBEGL78TFB mth2 Medicago truncatula genomic clone...    46   6.6    1
(AG371365) Mus musculus molossinus DNA, clone:MSMg01-176M07....    46   6.6    1
(EL504456) C11_1769_1.AB1 Blood stage Plasmodium falciparum ...    46   6.6    1
(EL500352) 022_PFLAB1-S-PLATE14B.AB1 Blood stage Plasmodium ...    46   6.6    1
(EH719110) CNML563.b2_F21.ab1 CNM(LMS) spotted knapweed Cent...    46   6.6    1
(DW934839) MSAM200392_2781_0846 LCM-dissected maize shoot ap...    46   6.6    1
(CT785137) Paramecium tetraurelia 5-PRIME EST from clone LK0...    46   6.6    1
(CT650181) Danio rerio EST, clone ZF_mu_136j06 3'.                 46   6.6    1
(CT637546) Danio rerio EST, clone ZF_mu_136j03 3'.                 46   6.6    1
(CT637545) Danio rerio EST, clone ZF_mu_136j03 5'.                 46   6.6    1
(CO223920) WS01020.B21_F11 SS-R-N-A-11 Picea sitchensis cDNA...    46   6.6    1
(FK876991) EST_crog_evp_911559 crog_evp Caligus rogercressey...    46   6.6    1
(FD465863) LARWE44TF Haematobia irritans 1st Instar Larvae H...    46   6.6    1
(FC685935) CAXX18535.rev CAXX Lottia gigantea from male gona...    46   6.6    1
(EY483234) CBBP12856.rev CBBP Hirudo medicinalis hermaphrodi...    46   6.6    1
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255...    46   6.6    1
(AC114430) Rattus norvegicus clone CH230-11L18, WORKING DRAF...    36   6.7    10
(CS468878) Sequence 69 from Patent EP1748080.                      36   6.8    17
(CS468877) Sequence 68 from Patent EP1748080.                      36   6.8    17
(CS419355) Sequence 69 from Patent WO2006094836.                   36   6.8    17
(CS419354) Sequence 68 from Patent WO2006094836.                   36   6.8    17
(EA102739) Sequence 122 from patent US 7195870.                    32   6.8    5
(AX323654) Sequence 142 from Patent WO0192565.                     32   6.8    5
(AX277959) Sequence 122 from Patent WO0177375.                     32   6.8    5
(GM996002) Sequence 142 from Patent EP2014776.                     32   6.8    5
(BA000016) Clostridium perfringens str. 13 DNA, complete gen...    36   7.0    23
(AM468539) Vitis vinifera contig VV78X142034.3, whole genome...    34   7.0    6
(CP000246) Clostridium perfringens ATCC 13124, complete genome.    34   7.0    20
(AM485502) Vitis vinifera, whole genome shotgun sequence, co...    36   7.1    5
(L15201) Caenorhabditis elegans cosmid C08C3, complete seque...    40   7.2    5
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    36   7.2    19
(CT573354) M.truncatula DNA sequence from clone MTH2-18N13 o...    36   7.4    11
(AY072044) Aedes albopictus mitochondrion, complete genome.        34   7.6    6
(AL929364) Plasmodium falciparum chromosome 8, unmapped contig.    30   8.4    8
(DQ102703) Coreana raphaelis mitochondrion, complete genome.       36   8.5    7
(BX004781) Zebrafish DNA sequence from clone CH211-149G8 in ...    34   8.7    10
(BB980692) Plasmodium berghei str. ANKA cDNA clone: OK010876...    34   9.1    3
(V00696) Yeast (S. cerevisiae) mitochondrial gene for cytoch...    36   9.2    4
(AC223709) Bos taurus clone CH240-461A6, WORKING DRAFT SEQUE...    44   9.4    4
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g...    34   9.5    16
(CR352236) Zebrafish DNA sequence from clone DKEYP-123E12 in...    38   9.6    6
(AC207087) Pongo abelii BAC clone CH276-35C10 from chromosom...    32   9.7    11
(DX839125) ZMMBLe0001B08.r ZMMBLe Zea mays genomic clone ZMM...    38   9.7    2
(AE017308) Mycoplasma mobile 163K complete genome.                 34   9.7    16
(BX571699) Zebrafish DNA sequence from clone DKEYP-116G9 in ...    36   9.9    10
(DU423379) 1098421149421 CHORI-243 Ovis aries genomic clone ...    44   10.0   2

>(D63523) Dictyostelium discoideum mitochondrial rpl16, rpl14, ORF188,
            rps14, rps8, rpl6, rps13, ORF127, ORF796 genes, complete
            and partial cds.
          Length = 5687

 Score =  729 bits (368), Expect(10) = 0.0
 Identities = 368/368 (100%)
 Strand = Plus / Plus


Query: 1877 aattaattattaaagtattattaaatatcttacgaagaaaaggtgaagtaccttttgaag 1936
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4802 aattaattattaaagtattattaaatatcttacgaagaaaaggtgaagtaccttttgaag 4861


Query: 1937 gaaagatagatatggtattaccatatttaaaagagttagggagaaaacaagacgatgcga 1996
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4862 gaaagatagatatggtattaccatatttaaaagagttagggagaaaacaagacgatgcga 4921


Query: 1997 agatgaataatttagcgttaaatttacaaatgaggatcgtaaccgatttattaaactata 2056
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4922 agatgaataatttagcgttaaatttacaaatgaggatcgtaaccgatttattaaactata 4981


Query: 2057 aaggtgatacagaagtaaagaacaatcatgtggctttagtacgtaaacgaatagattatc 2116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4982 aaggtgatacagaagtaaagaacaatcatgtggctttagtacgtaaacgaatagattatc 5041


Query: 2117 taaactatatgagtcaaaacccacgaagatcacgaaatgcagggccgagatctgattata 2176
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5042 taaactatatgagtcaaaacccacgaagatcacgaaatgcagggccgagatctgattata 5101


Query: 2177 aagttattgggaaagcaaaatatcagggaaaaatgatgtatgctaaattaactgaacaaa 2236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5102 aagttattgggaaagcaaaatatcagggaaaaatgatgtatgctaaattaactgaacaaa 5161


Query: 2237 gaaagatg 2244
            ||||||||
Sbjct: 5162 gaaagatg 5169

 Score =  674 bits (340), Expect(4) = 0.0
 Identities = 343/344 (99%)
 Strand = Plus / Plus


Query: 846  ggaatgagagttgtacaaaagaaagatattttaaacgctaagttgaatgtacaaacacca 905
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3775 ggaatgagagttgtacaaaagaaagatattttaaacgctaagttgaatgtacaaacacca 3834


Query: 906  atagttgttgaggaaattaaaaatattagtttcgcttcacaaatggtacataaggaacac 965
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3835 atagttgttgaggaaattaaaaatattagtttcgcttcacaaatggtacataaggaacac 3894


Query: 966  gacaatttaccgacgttgcggtcaaaacaacgaatgttattaaaagcatattttgatcaa 1025
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3895 gacaatttaccgacgttgcggtcaaaacaacgaatgttattaaaagcatattttgatcaa 3954


Query: 1026 ttacgaataaacaatttaaaggctgtaaataacatttttacattaaaaaagagagtatta 1085
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3955 ttacgaataaacaatttaaaggctgtaaataacatttttacattaaaaaagagagtatta 4014


Query: 1086 aatttaaaaagcaatcatttaattgtaacatatagtccgaaaggaacaaaagttaataag 1145
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4015 aatttaaaaagcaattatttaattgtaacatatagtccgaaaggaacaaaagttaataag 4074


Query: 1146 gctaatgttttacaacaattgttaaaatataaacaatattttac 1189
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4075 gctaatgttttacaacaattgttaaaatataaacaatattttac 4118

 Score =  448 bits (226), Expect(4) = 0.0
 Identities = 226/226 (100%)
 Strand = Plus / Plus


Query: 613  tgataggaataaataaaatgattatacagagaacagagttatatactacaacaggagtag 672
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3542 tgataggaataaataaaatgattatacagagaacagagttatatactacaacaggagtag 3601


Query: 673  ttaaaagtacaatccacggaaatattataaatatttcttttaatagaaacatacaatatc 732
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3602 ttaaaagtacaatccacggaaatattataaatatttcttttaatagaaacatacaatatc 3661


Query: 733  aatatagacaaattagtaataagaataaaaataggaatttaagtccacgagtacttaatt 792
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3662 aatatagacaaattagtaataagaataaaaataggaatttaagtccacgagtacttaatt 3721


Query: 793  taaaggaaaagggcactgcaagagtaaccaaattaaataaaaacag 838
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3722 taaaggaaaagggcactgcaagagtaaccaaattaaataaaaacag 3767

 Score =  301 bits (152), Expect(10) = 0.0
 Identities = 152/152 (100%)
 Strand = Plus / Plus


Query: 344  aaattatggttatataaatttataagacgaaaatttaatttaataggacctttaaatgaa 403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3273 aaattatggttatataaatttataagacgaaaatttaatttaataggacctttaaatgaa 3332


Query: 404  caaattttaagtccatatttacaatttaatttatattttgataaatcgaaagcccgaaag 463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3333 caaattttaagtccatatttacaatttaatttatattttgataaatcgaaagcccgaaag 3392


Query: 464  gaaacgtttaaagtatatttaggaaaaattgg 495
            ||||||||||||||||||||||||||||||||
Sbjct: 3393 gaaacgtttaaagtatatttaggaaaaattgg 3424

 Score =  226 bits (114), Expect(4) = 0.0
 Identities = 114/114 (100%)
 Strand = Plus / Plus


Query: 1197 tgggctttcaaactaaaagcgagagttacaaaaacgaactttataaaaactcaaatagcg 1256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4126 tgggctttcaaactaaaagcgagagttacaaaaacgaactttataaaaactcaaatagcg 4185


Query: 1257 ctggaaaagcaaaaagtacgaaatatcgcacagccatgttatattagtcttaac 1310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4186 ctggaaaagcaaaaagtacgaaatatcgcacagccatgttatattagtcttaac 4239

 Score =  206 bits (104), Expect(10) = 0.0
 Identities = 104/104 (100%)
 Strand = Plus / Plus


Query: 239  tagcacatatagtaagaatagaaatgtttgaagaaaaaatagatagattagatttaatat 298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3169 tagcacatatagtaagaatagaaatgtttgaagaaaaaatagatagattagatttaatat 3228


Query: 299  ttaccaaatatgtagaatataaatttcctttatatttattagga 342
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3229 ttaccaaatatgtagaatataaatttcctttatatttattagga 3272

 Score =  206 bits (104), Expect(10) = 0.0
 Identities = 107/108 (99%)
 Strand = Plus / Plus


Query: 1511 ggttaaaagtgtgaaggttattgaggagttaaaagactttgtagctcttgaagaagaaat 1570
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4440 ggttaaaagtgtgaaggttattgaggagttaaaagactttgtagctcttgaagaagaaat 4499


Query: 1571 ggaagctcattataaaactccagttgaaacaattatgtcatcaatagt 1618
            ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4500 ggaagcttattataaaactccagttgaaacaattatgtcatcaatagt 4547

 Score =  202 bits (102), Expect(10) = 0.0
 Identities = 102/102 (100%)
 Strand = Plus / Plus


Query: 1400 atatctgtttttaaaaagccaaagtaaattagatatagatttattgttaatagaattaaa 1459
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4329 atatctgtttttaaaaagccaaagtaaattagatatagatttattgttaatagaattaaa 4388


Query: 1460 aaagaaagcgcgacaatcgaaaataaagtacaaacggcgtac 1501
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4389 aaagaaagcgcgacaatcgaaaataaagtacaaacggcgtac 4430

 Score =  184 bits (93), Expect(10) = 0.0
 Identities = 93/93 (100%)
 Strand = Plus / Plus


Query: 1674 ttgcgagtgaaagagtatttacagtactcacaaataagacgattaatagatataacgaat 1733
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4603 ttgcgagtgaaagagtatttacagtactcacaaataagacgattaatagatataacgaat 4662


Query: 1734 gaaaaggaattatataaaaataaggagctgagc 1766
            |||||||||||||||||||||||||||||||||
Sbjct: 4663 gaaaaggaattatataaaaataaggagctgagc 4695

 Score =  172 bits (87), Expect(10) = 0.0
 Identities = 90/91 (98%)
 Strand = Plus / Plus


Query: 2311 ttatataagttaagattaacaaaacaaagagtcacagtaccgaccttataccaaatatat 2370
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5236 ttatataagttaagattaccaaaacaaagagtcacagtaccgaccttataccaaatatat 5295


Query: 2371 gaaagagtaataaatcatataaaaggattcg 2401
            |||||||||||||||||||||||||||||||
Sbjct: 5296 gaaagagtaataaatcatataaaaggattcg 5326

 Score = 97.6 bits (49), Expect(4) = 0.0
 Identities = 49/49 (100%)
 Strand = Plus / Plus


Query: 557  gccaaagtaatgaatgactggttagaagaagttatgagaacaagatatt 605
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3486 gccaaagtaatgaatgactggttagaagaagttatgagaacaagatatt 3534

 Score = 93.7 bits (47), Expect(10) = 0.0
 Identities = 47/47 (100%)
 Strand = Plus / Plus


Query: 1795 gtattcaacaaaaatttcttaaaactgtagtaatagctgtaaatcat 1841
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4724 gtattcaacaaaaatttcttaaaactgtagtaatagctgtaaatcat 4770

 Score = 34.2 bits (17), Expect(10) = 0.0
 Identities = 17/17 (100%)
 Strand = Plus / Plus


Query: 2411 cacaaggggtatactcg 2427
            |||||||||||||||||
Sbjct: 5336 cacaaggggtatactcg 5352

 Score = 32.2 bits (16), Expect(10) = 0.0
 Identities = 16/16 (100%)
 Strand = Plus / Plus


Query: 1850 tcaacaaaaagatagt 1865
            ||||||||||||||||
Sbjct: 4779 tcaacaaaaagatagt 4794

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 2,757,731,784
Number of extensions: 177485321
Number of successful extensions: 15106792
Number of sequences better than 10.0: 314
Length of query: 2499
Length of database: 101,790,757,118
Length adjustment: 25
Effective length of query: 2474
Effective length of database: 99,238,119,368
Effective search space: 245515107316432
Effective search space used: 245515107316432
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

Query= Contig-U16564-1 (Contig-U16564-1Q) /CSM_Contig/Contig-U16564-1Q.Seq.d
         (2499 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q2LCP4) RecName: Full=Uncharacterized mitochondrial protein Mp3...   142   2e-64
DQ336395_45(DQ336395|pid:none) Dictyostelium citrinum mitochondr...   161   1e-54
EU275726_41(EU275726|pid:none) Polysphondylium pallidum strain P...    42   0.084
AL844503_159(AL844503|pid:none) Plasmodium falciparum 3D7 chromo...    42   0.084
AL035476_40(AL035476|pid:none) Plasmodium falciparum MAL4P3.           42   0.084
CP000262_1708(CP000262|pid:none) Streptococcus pyogenes MGAS1075...    42   0.14
CP001083_2568(CP001083|pid:none) Clostridium botulinum Ba4 str. ...    41   0.19
AL844505_250(AL844505|pid:none) Plasmodium falciparum 3D7 chromo...    40   0.32
AF282241_1(AF282241|pid:none) Plasmodium falciparum strain K1 ch...    40   0.42
AL844504_221(AL844504|pid:none) Plasmodium falciparum 3D7 chromo...    39   0.71
AL929353_66(AL929353|pid:none) Plasmodium falciparum strain 3D7,...    39   0.71
AE014186_230(AE014186|pid:none) Plasmodium falciparum 3D7 chromo...    39   0.71
A53430(A53430)1-phosphatidylinositol-4,5-bisphosphate phosphodie...    39   0.71
AL929357_69(AL929357|pid:none) Plasmodium falciparum strain 3D7,...    39   0.71
AL844508_227(AL844508|pid:none) Plasmodium falciparum 3D7 chromo...    39   0.71
CP000300_654(CP000300|pid:none) Methanococcoides burtonii DSM 62...    39   1.2
L04159_1(L04159|pid:none) Plasmodium falciparum unknown gene.          39   1.2
CP000726_2220(CP000726|pid:none) Clostridium botulinum A str. AT...    39   1.2
AL844505_55(AL844505|pid:none) Plasmodium falciparum 3D7 chromos...    39   1.2
(Q8IDX6) RecName: Full=Reticulocyte-binding protein 2 homolog a;...    39   1.2
AY138499_1(AY138499|pid:none) Plasmodium falciparum normocyte bi...    39   1.2
AF312916_1(AF312916|pid:none) Plasmodium falciparum reticulocyte...    39   1.2
CP000939_2369(CP000939|pid:none) Clostridium botulinum B1 str. O...    38   1.6
(Q4R3Q7) Lebercilin-like protein (Leber congenital amaurosis 5-l...    38   1.6
AB169356_1(AB169356|pid:none) Macaca fascicularis testis cDNA, c...    38   1.6
AE014188_377(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...    38   1.6
U85713_1(U85713|pid:none) Mus musculus phospholipase C-beta-1b m...    38   1.6
AL844505_292(AL844505|pid:none) Plasmodium falciparum 3D7 chromo...    38   1.6
AL163279_5(AL163279|pid:none) Homo sapiens chromosome 21 segment...    38   1.6
BC043006_1(BC043006|pid:none) Homo sapiens Leber congenital amau...    38   1.6
CR382401_38(CR382401|pid:none) Plasmodium falciparum chromosome ...    38   1.6
(O95447) RecName: Full=Lebercilin-like protein; AltName: Full=Le...    38   1.6
AL844506_148(AL844506|pid:none) Plasmodium falciparum 3D7 chromo...    31   1.9
AL844504_150(AL844504|pid:none) Plasmodium falciparum 3D7 chromo...    38   2.1
AJ278314_1(AJ278314|pid:none) Homo sapiens mRNA for phospholipas...    38   2.1
AM180252_1038(AM180252|pid:none) Lawsonia intracellularis PHE/MN...    38   2.1
CR380958_523(CR380958|pid:none) Candida glabrata strain CBS138 c...    38   2.1
T28676(T28676;A45521)rhoptry protein - Plasmodium yoelii (fragme...    37   2.7
(Q9NQ65) RecName: Full=1-phosphatidylinositol-4,5-bisphosphate p...    37   2.7
(P10687) RecName: Full=1-phosphatidylinositol-4,5-bisphosphate p...    37   2.7
AL840635_3(AL840635|pid:none) Mouse DNA sequence from clone RP23...    37   2.7
AL844507_240(AL844507|pid:none) Plasmodium falciparum 3D7 chromo...    37   2.7
AK129166_1(AK129166|pid:none) Mus musculus premature mRNA for mK...    37   2.7
AL049632_4(AL049632|pid:none) Human DNA sequence from clone RP5-...    37   2.7
AL844506_176(AL844506|pid:none) Plasmodium falciparum 3D7 chromo...    37   2.7
AL031683_1(AL031683|pid:none) Human DNA sequence from clone RP5-...    37   2.7
AY700145_23(AY700145|pid:none) Polysphondylium pallidum mitochon...    37   2.7
AF498249_1(AF498249|pid:none) Mus musculus strain ILS phospholip...    37   2.7
AL844505_260(AL844505|pid:none) Plasmodium falciparum 3D7 chromo...    37   2.7
AE014187_150(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    37   3.5
AE014187_126(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    37   3.5
AL844508_33(AL844508|pid:none) Plasmodium falciparum 3D7 chromos...    37   3.5
AL929355_32(AL929355|pid:none) Plasmodium falciparum strain 3D7,...    37   3.5
AF092091_1(AF092091|pid:none) Rattus norvegicus cp431 mRNA, part...    37   3.5
AE014187_224(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    37   3.5
AL844509_194(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    37   3.5
AL844509_447(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    37   3.5
AE014187_496(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    37   4.6
AL844509_426(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    37   4.6
CP000728_2381(CP000728|pid:none) Clostridium botulinum F str. La...    37   4.6
CP001581_2583(CP001581|pid:none) Clostridium botulinum A2 str. K...    37   4.6
AL035476_75(AL035476|pid:none) Plasmodium falciparum MAL4P3.           36   6.0
D00570_2(D00570|pid:none) Mus musculus mRNA for ORFs (putative p...    36   6.0
AC116957_86(AC116957|pid:none) Dictyostelium discoideum chromoso...    36   6.0
CP000510_68(CP000510|pid:none) Psychromonas ingrahamii 37, compl...    36   6.0
AE014187_340(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    36   7.9
CP001279_410(CP001279|pid:none) Nautilia profundicola AmH, compl...    36   7.9
BT074474_1(BT074474|pid:none) Osmerus mordax clone omor-rgc-505-...    36   7.9

>(Q2LCP4) RecName: Full=Uncharacterized mitochondrial protein Mp36;
            AltName: Full=ORF760;  &DQ336395_46(DQ336395|pid:none)
          Length = 760

 Score =  142 bits (359), Expect(2) = 2e-64
 Identities = 123/413 (29%), Positives = 188/413 (45%), Gaps = 4/413 (0%)
 Frame = +3

Query: 639  QRTELYTTTGVVK-STIHGNIINISFNRNIQYQYRQISNKNKNRNLSPRVLNLKEKGTAR 815
            Q T++ TT  VV      G  + ISF   ++ QYRQ SN   N  + P+VLNLKEKG
Sbjct: 9    QITQINTTNDVVSFRNTTGKRVIISFT--LKTQYRQFSNVTNN--IRPQVLNLKEKGIEN 64

Query: 816  VTKLNKNRKKGMRVVQKKDI---LNAKLNVQTPIVVEEIKNISFASQMVHKEHDNLPTLR 986
              KL  ++         + I   LN+   + +   +EEIKNIS    +      N   +R
Sbjct: 65   RKKLVNSQSLSFFKTTAQAIESQLNSGNLLASSQSIEEIKNISLPVDL------NKNVIR 118

Query: 987  SKQRMLLKAYFDQLRINNLKAVNNIFTLKKRVLNLKSNHLIVTYSPKGTKVNKANVLQQL 1166
             K+R LL AY  QL+I  L AV   F LK R+LN K+  ++V+Y+PK    NK N LQQL
Sbjct: 119  FKKRKLLTAYLKQLQIKKLNAVKFTFKLKNRLLNRKT--VVVSYTPKVNNTNKVNFLQQL 176

Query: 1167 LKYKQYFTKKWAFKLKARVTKTNFIKTQIALEKQKVRNIAQPCYISXXXXXXXXXXXXXX 1346
            L +KQ   K +A    +   +T F+ T      QKV   ++
Sbjct: 177  LTFKQKVAKHYAITKISNKNQTMFLNTHGIFRNQKVFKRSK-------------LKMLHQ 223

Query: 1347 XXXVLTSKAKLQRFKKQRYLFLKSQSXXXXXXXXXXXXXXARQXXXXXXXXXXXXXXXXX 1526
                +    K+ RF+KQRY  LK  +               ++
Sbjct: 224  QKVSIKLLQKVLRFQKQRYSILKPHNKFDSILTALMADCNPKKRMKKNSLPID------- 276

Query: 1527 XXXXXXDFVALEEEMEAHYKTPVETIMSSIVTKYTENAKPLILKNLQQKLRVKEYLQYSQ 1706
                    +    E+    K   ++ +  ++TKY    + LI K  +++ R+K YL  +Q
Sbjct: 277  --------INHRTEISQQQK---DSDLEGLLTKYKVKTQELITKITKKQRRLKYYLILTQ 325

Query: 1707 IRRLIDITNEKELYKNKELSKRNEKKLKKSIQQKFLKTVVIAVNHKKNQQKDS 1865
            +R   D++   E+ K +E+ K+NE+K +KSIQ +F+K V+  V  K  QQ+++
Sbjct: 326  LRVQKDLSKGNEVEKKQEIQKKNEQKQQKSIQTQFIKKVLTGVLQKNEQQQET 378

 Score =  129 bits (324), Expect(2) = 2e-64
 Identities = 79/202 (39%), Positives = 111/202 (54%)
 Frame = +1

Query: 1879 LIIKVLLNILRRKGEVPFEGKIDMVLPYLKELGRKQDDAKMNNLALNLQMRIVTDLLNYK 2058
            LIIK+LLNILRRKGEV  EG +D+  PYLKE+ +KQ   +M  +A N++M++V D ++YK
Sbjct: 382  LIIKILLNILRRKGEVTGEGNMDITYPYLKEVKKKQRQLQMAYVAANIKMKLVNDFIDYK 441

Query: 2059 GDTEVKNNHVALVRKRIDYLNYMSQNPRRSRNAGPRSDYKVIGKAKYQGKMMYAKLTEQR 2238
            GD+ +   HV L++ R  YLN +        N      YK       + ++ Y K T  R
Sbjct: 442  GDSRLWGIHVNLIKSRNQYLNIIETQFENEENVYQNPIYKT-KLVPLRSEVEYLKKT--R 498

Query: 2239 KMLENVALKXXXXXXXXXXESEKKLYKLRLTKQRVTVPTLYQIYERVINHIKGFEKKTQG 2418
             M   V  +          ES+KKLY LRL KQRV VPTL  IY+ V   + G   + QG
Sbjct: 499  YMKYGVNSRNKITILNNVMESDKKLYNLRLPKQRVQVPTLLTIYKNVRECLSG--TRAQG 556

Query: 2419 VYSKAKKFQNILTKLQAIKRNK 2484
               + +     + KL+ +KRN+
Sbjct: 557  KKEEDRAIYQFVMKLEKLKRNR 578

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 2,950,714,472
Number of extensions: 50165399
Number of successful extensions: 162611
Number of sequences better than 10.0: 68
Number of HSP's gapped: 162024
Number of HSP's successfully gapped: 72
Length of query: 833
Length of database: 1,061,185,681
Length adjustment: 137
Effective length of query: 696
Effective length of database: 613,408,305
Effective search space: 426932180280
Effective search space used: 426932180280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.79  gvh: 0.28  alm: 0.48  top: 0.53  tms: 0.00  mit: 0.18  mip: 0.00
 nuc: 0.47  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 84.0 %: nuclear
	  8.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: plasma membrane

>> prediction for Contig-U16564-1 is nuc