Contig-U16556-1
Contig ID Contig-U16556-1
Contig update 2004. 6.11
Contig sequence
>Contig-U16556-1 (Contig-U16556-1Q) /CSM_Contig/Contig-U16556-1Q.Seq.d
AAGTGAAAGTAGTAGTGATGATGATGATGAAAAAGATGAACAACAACAAT
CAACATTGTTCCTCACTGATGAACAACCAAAACAACAAAACTTTTTCTTC
CAAGATGAAGATGCTACATCTGAAAATAATGCAAATAAGAAGTCTGAATC
ATTATTTGAAGATGAGGATGATATTTTCGGTGATAAACCAGTCGCAAGTA
AAAAATCATCAAATTCATACACTTCTTCATTATCAGATATTTTAGGTGGT
GATGATGAAGATGATTTATTCGGTGGTAGTAAAAAGAAACAACAACAACA
AGAAGATGCAGATGGTGATGAACCAACTAAAAAGAAAGATCCATTCGCTG
ATGAACTTAATAATACATTATCTTCAAAGAATAAAGGAGGTGACGATGAT
TTATTCGGTGGTAGTAGTTCAACTACAACCACTTCAAAACCAAAGAAGAA
ATCAATGTTTGATGATGATTTATTCGGTGATTCTGAAGAAACACCTGCAC
CAAAAAGTAGTGCTAGTAGAAAAGTTACATTTGATGATTCATTATTTGGT
GATGATGAAACAGCTTTACCAACCTCTAAAAAAGATTCAACTACTACCTC
TTCACAACCACAACAAAAGAAAACATTAAATGATTTATTCACTGATGAAG
ATCTAACACCAGCAACCAAAAAAGAAACAAAGAAATCATCATCACTTAGC
TTTTTGGATGGTATGGATGAAGATGATCTATTTGGTACTCCAAAACCAAA
ATCAACTACAACATCAGCAGCACCAACAGCAACTACTACCAAACCACCAA
CTCCAATACCTGATTCAGATGCATCAGGTAGTGAGTCAACAACTGGTAAA
----------AAGAATCAGTATTTGGTGATTTCTCAATTAAAAAAAATCC
AACAACATCATCATCAACAACTGCTACTGAAAATAAACCAGCAGTTAAAA
AATCAACTAAATCAAACTTTTTCGATTTTGAAGACACAGATTCACCATTA
TCATCAAATAAAAAGAATGATGATGATATTTTCTCATCAACAACAAAGAA
ATCAACAACAACAACAACAACAACAACATCAAGTAAAGACTTTTTTGGTG
ATTTGGATACTAGTAGCGGTAATAAAAAAGTTGAAGAAAAGAAATCATCA
GATTTTGATAGTTTCTTCTCTGGTAGTGATGATCCATTAGGAATTACAAA
ACCAAAATCAAAGACAACTACTACACCACCACTTACATCTACAACAGCAA
ATATTGAATCTGATGATCCACTTTCATTAGGTTTACCAACATTCACAAAT
AACAACAATAATAATAATGCAAAACCACCTCCACCACCATCACCATTAGG
AGAGGATGTACCATCACCATTAACAAGTAATAATACAAAGAATAGAACTA
AATCAATTGGATCAATGTTTGAAGCACAACAACAACTACAACAACAACAA
CAAGAAAAGAATAGATCAGAATCACCAACATCAGAAAAAGCTGAACCAAC
AAAGAAAACATCAAATATTTCGTCACTTCAAAATAAATTATCATTAAATC
CAAATATGTTTTTACCAGGATCTAAAATGCCAAAGAAAAAGAAAGAAGAA
TCAGAAAATGAAGATGATAGTAGTACAAATAATGATAATGATTCATCTGC
AACTGATTTATCAGATTCTGGTAGATCATCACCATCTGTCACTTCTCCAA
CCCTATCTGGTGGTAGACCACGTAGAAATACAGTTTCGTCTCGTAATAAT
AATGACTCTGAAGAAAGTGAACCAGTTAAAGAATTGACTCATGCAACTGC
AAGTAGACCAAAATCTGGTGGTCGTAGACCTCCAACTCGTAAATCTGGTA
CTTCTGCTCCAAATAGATCAGAATCTCCAACTCCAACTCAAAAATCCGAT
TCAGAATCTGAAAAAGTCAGATCCTCTTCACCAATTACAACCAAACCAGT
TGTTTCTGAACCAACAAAGAAGACTATTTCAAATACATCATTCTTTGATG
ATATTCCATCAGAAAAAACTTCTAGTGGTAAATCTTCACCATCTCCAACT
ATTAAATCAACATCAGAAAAAGTTACAATTGACCCATTAGGTGATATCTT
TGCATCTACTACTACTAAACCAACTGCTTCTGAAACCAAAGCTGCTCTTT
CCTCTGCTCCTAAAAAATCTGAACCAGAAACACCAAAAGAAACACCAAAA
GAAACAC

Gap gap included
Contig length 2197
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 3
Number of EST 6
Link to clone list U16556
List of clone(s)

est1=SHG396F,1,602
est2=AHL489F,142,820
est3=VHP102F,198,850
est4=VHP102Z,851,1563
est5=AHL489Z,1440,2196
est6=SHG396Z,1487,2197
Translated Amino Acid sequence
SESSSDDDDEKDEQQQSTLFLTDEQPKQQNFFFQDEDATSENNANKKSESLFEDEDDIFG
DKPVASKKSSNSYTSSLSDILGGDDEDDLFGGSKKKQQQQEDADGDEPTKKKDPFADELN
NTLSSKNKGGDDDLFGGSSSTTTTSKPKKKSMFDDDLFGDSEETPAPKSSASRKVTFDDS
LFGDDETALPTSKKDSTTTSSQPQQKKTLNDLFTDEDLTPATKKETKKSSSLSFLDGMDE
DDLFGTPKPKSTTTSAAPTATTTKPPTPIPDSDASGSESTTGK---

---ESVFGDFSIKKNPTTSSSTTATENKPAVKKSTKSNFFDFEDTDSPLSSNKKNDDDIF
SSTTKKSTTTTTTTTSSKDFFGDLDTSSGNKKVEEKKSSDFDSFFSGSDDPLGITKPKSK
TTTTPPLTSTTANIESDDPLSLGLPTFTNNNNNNNAKPPPPPSPLGEDVPSPLTSNNTKN
RTKSIGSMFEAQQQLQQQQQEKNRSESPTSEKAEPTKKTSNISSLQNKLSLNPNMFLPGS
KMPKKKKEESENEDDSSTNNDNDSSATDLSDSGRSSPSVTSPTLSGGRPRRNTVSSRNNN
DSEESEPVKELTHATASRPKSGGRRPPTRKSGTSAPNRSESPTPTQKSDSESEKVRSSSP
ITTKPVVSEPTKKTISNTSFFDDIPSEKTSSGKSSPSPTIKSTSEKVTIDPLGDIFASTT
TKPTASETKAALSSAPKKSEPETPKETPKET


Translated Amino Acid sequence (All Frames)
Frame A:
k*k*******kr*tttinivph**ttkttklflpr*rcyi*k*ck*ev*iii*r*g*yfr
**tsrk*kiikfihffiiryfrw***r*firw**kettttrrcrw**tn*kersir**t*
*yiifke*rr*r*firw**fnynhfktkeeinv***fir*f*rntctkk*c**ksyi**f
iiw***nsftnl*krfnyylfttttkenik*fih**rsntsnqkrnkeiiit*lfgwyg*
r*siwysktkinynisstnsnyyqttnsnt*frcir**vnnw*---

---knqylvisqlkkiqqhhhqqlllkinqqlknqlnqtfsilktqihhyhqikrmmmif
shqqqrnqqqqqqqqhqvktflviwilvavikklkkrnhqilivsslvvmih*elqnqnq
rqllhhhlhlqqqilnlmihfh*vyqhsqittiiimqnhlhhhhh*ermyhhh*qviiqr
ielnqldqclkhnnnynnnnkkridqnhqhqkklnqqrkhqifrhfkinyh*iqicfyqd
lkcqrkrkknqkmkmivvqimimihlqliyqilvdhhhlsllqpylvvdhveiqfrlvii
mtlkkvnqlkn*lmqlqvdqnlvvvdlqlvnlvlllqidqnlqlqlknpiqnlkksdplh
qlqpnqlflnqqrrlfqihhslmifhqkkllvvnlhhlqllnqhqkklqlth*vislhll
llnqlllkpkllfplllknlnqkhqkkhqkkh

Frame B:
SESSSDDDDEKDEQQQSTLFLTDEQPKQQNFFFQDEDATSENNANKKSESLFEDEDDIFG
DKPVASKKSSNSYTSSLSDILGGDDEDDLFGGSKKKQQQQEDADGDEPTKKKDPFADELN
NTLSSKNKGGDDDLFGGSSSTTTTSKPKKKSMFDDDLFGDSEETPAPKSSASRKVTFDDS
LFGDDETALPTSKKDSTTTSSQPQQKKTLNDLFTDEDLTPATKKETKKSSSLSFLDGMDE
DDLFGTPKPKSTTTSAAPTATTTKPPTPIPDSDASGSESTTGK---

---risiw*fln*kksnniiinncy*k*tss*kin*iklfrf*rhrftiiik*ke***yf
linnkeinnnnnnnnik*rlfw*fgy**r**ks*rkeiirf**fllw***sirnyktkik
dnyytttyiynsky*i**stfirftnihk*qq***ckttsttitirrgctitink**yke
*n*inwinv*stttttttttrke*iritnirks*tnkenikyfvtsk*iiikskyvftri
*nakekerrirk*r***yk****ficn*firfw*iitichfsnpiww*tt*kysfvs***
*l*rk*ts*ridscnck*tkiwws*tsns*iwyfcsk*irisnsnskirfri*ksqilft
nynqtscf*tnkedyfkyiil**ysirknf*w*iftisny*inirksyn*pir*ylciyy
y*tncf*nqscsflcs*ki*trntkrntkrn

Frame C:
vkvvvmmmmkkmnnnnqhcsslmnnqnnktfsskmkmlhlkimqirslnhylkmrmifsv
inqsqvknhqihtllhyqif*vvmmkmiysvvvkrnnnnkkmqmvmnqlkrkihslmnli
ihylqrikevtmiysvvvvqlqplqnqrrnqclmmiysvilkkhlhqkvvlveklhlmih
ylvmmkqlyqplkkiqllplhnhnkrkh*miyslmki*hqqpkkkqrnhhhlafwmvwmk
miylvlqnqnqlqhqqhqqqllpnhqlqyliqmhqvvsqqlv---

---ESVFGDFSIKKNPTTSSSTTATENKPAVKKSTKSNFFDFEDTDSPLSSNKKNDDDIF
SSTTKKSTTTTTTTTSSKDFFGDLDTSSGNKKVEEKKSSDFDSFFSGSDDPLGITKPKSK
TTTTPPLTSTTANIESDDPLSLGLPTFTNNNNNNNAKPPPPPSPLGEDVPSPLTSNNTKN
RTKSIGSMFEAQQQLQQQQQEKNRSESPTSEKAEPTKKTSNISSLQNKLSLNPNMFLPGS
KMPKKKKEESENEDDSSTNNDNDSSATDLSDSGRSSPSVTSPTLSGGRPRRNTVSSRNNN
DSEESEPVKELTHATASRPKSGGRRPPTRKSGTSAPNRSESPTPTQKSDSESEKVRSSSP
ITTKPVVSEPTKKTISNTSFFDDIPSEKTSSGKSSPSPTIKSTSEKVTIDPLGDIFASTT
TKPTASETKAALSSAPKKSEPETPKETPKET

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U16556-1 (Contig-U16556-1Q)
/CSM_Contig/Contig-U16556-1Q.Seq.d
(2207 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U16556-1 (Contig-U16556-1Q) /CSM_Contig/Conti... 1949 0.0
Contig-U13507-1 (Contig-U13507-1Q) /CSM_Contig/Conti... 1179 0.0
Contig-U16557-1 (Contig-U16557-1Q) /CSM_Contig/Conti... 634 0.0
Contig-U16558-1 (Contig-U16558-1Q) /CSM_Contig/Conti... 462 e-129
Contig-U10900-1 (Contig-U10900-1Q) /CSM_Contig/Conti... 58 6e-08
Contig-U12247-1 (Contig-U12247-1Q) /CSM_Contig/Conti... 50 1e-05
Contig-U09407-1 (Contig-U09407-1Q) /CSM_Contig/Conti... 48 6e-05
Contig-U16595-1 (Contig-U16595-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U16594-1 (Contig-U16594-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U15725-1 (Contig-U15725-1Q) /CSM_Contig/Conti... 44 0.001

>Contig-U16556-1 (Contig-U16556-1Q) /CSM_Contig/Contig-U16556-1Q.Seq.d
Length = 2207

Score = 1949 bits (983), Expect = 0.0
Identities = 1029/1037 (99%)
Strand = Plus / Plus


Query: 1 aagtgaaagtagtagtgatgatgatgatgaaaaagatgaacaacaacaatcaacattgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtgaaagtagtagtgatgatgatgatgaaaaagatgaacaacaacaatcaacattgtt 60


Query: 61 cctcactgatgaacaaccaaaacaacaaaactttttcttccaagatgaagatgctacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctcactgatgaacaaccaaaacaacaaaactttttcttccaagatgaagatgctacatc 120


Query: 121 tgaaaataatgcaaataagaagtctgaatcattatttgaagatgaggatgatattttcgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaaaataatgcaaataagaagtctgaatcattatttgaagatgaggatgatattttcgg 180


Query: 181 tgataaaccagtcgcaagtaaaaaatcatcaaattcatacacttcttcattatcagatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgataaaccagtcgcaagtaaaaaatcatcaaattcatacacttcttcattatcagatat 240


Query: 241 tttaggtggtgatgatgaagatgatttattcggtggtagtaaaaagaaacaacaacaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttaggtggtgatgatgaagatgatttattcggtggtagtaaaaagaaacaacaacaaca 300


Query: 301 agaagatgcagatggtgatgaaccaactaaaaagaaagatccattcgctgatgaacttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaagatgcagatggtgatgaaccaactaaaaagaaagatccattcgctgatgaacttaa 360


Query: 361 taatacattatcttcaaagaataaaggaggtgacgatgatttattcggtggtagtagttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taatacattatcttcaaagaataaaggaggtgacgatgatttattcggtggtagtagttc 420


Query: 421 aactacaaccacttcaaaaccaaagaagaaatcaatgtttgatgatgatttattcggtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aactacaaccacttcaaaaccaaagaagaaatcaatgtttgatgatgatttattcggtga 480


Query: 481 ttctgaagaaacacctgcaccaaaaagtagtgctagtagaaaagttacatttgatgattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttctgaagaaacacctgcaccaaaaagtagtgctagtagaaaagttacatttgatgattc 540


Query: 541 attatttggtgatgatgaaacagctttaccaacctctaaaaaagattcaactactacctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 attatttggtgatgatgaaacagctttaccaacctctaaaaaagattcaactactacctc 600


Query: 601 ttcacaaccacaacaaaagaaaacattaaatgatttattcactgatgaagatctaacacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttcacaaccacaacaaaagaaaacattaaatgatttattcactgatgaagatctaacacc 660


Query: 661 agcaaccaaaaaagaaacaaagaaatcatcatcacttagctttttggatggtatggatga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agcaaccaaaaaagaaacaaagaaatcatcatcacttagctttttggatggtatggatga 720


Query: 721 agatgatctatttggtactccaaaaccaaaatcaactacaacatcagcagcaccaacagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agatgatctatttggtactccaaaaccaaaatcaactacaacatcagcagcaccaacagc 780


Query: 781 aactactaccaaaccaccaactccaatacctgattcagatgcatcaggtagtgagtcaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aactactaccaaaccaccaactccaatacctgattcagatgcatcaggtagtgagtcaac 840


Query: 841 aactggtaaannnnnnnnnnaagaatcagtatttggtgatttctcaattnnnnnnnntcc 900
||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 841 aactggtaaannnnnnnnnnaagaatcagtatttggtgatttctcaattaaaaaaaatcc 900


Query: 901 aacaacatcatcatcaacaactgctactgaaaataaaccagcagttaaaaaatcaactaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aacaacatcatcatcaacaactgctactgaaaataaaccagcagttaaaaaatcaactaa 960


Query: 961 atcaaactttttcgattttgaagacacagattcaccattatcatcaaataaaaagaatga 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 atcaaactttttcgattttgaagacacagattcaccattatcatcaaataaaaagaatga 1020


Query: 1021 tgatgatattttctcat 1037
|||||||||||||||||
Sbjct: 1021 tgatgatattttctcat 1037


Score = 1495 bits (754), Expect = 0.0
Identities = 754/754 (100%)
Strand = Plus / Plus


Query: 1454 gaaaagaatagatcagaatcaccaacatcagaaaaagctgaaccaacaaagaaaacatca 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1454 gaaaagaatagatcagaatcaccaacatcagaaaaagctgaaccaacaaagaaaacatca 1513


Query: 1514 aatatttcgtcacttcaaaataaattatcattaaatccaaatatgtttttaccaggatct 1573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1514 aatatttcgtcacttcaaaataaattatcattaaatccaaatatgtttttaccaggatct 1573


Query: 1574 aaaatgccaaagaaaaagaaagaagaatcagaaaatgaagatgatagtagtacaaataat 1633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1574 aaaatgccaaagaaaaagaaagaagaatcagaaaatgaagatgatagtagtacaaataat 1633


Query: 1634 gataatgattcatctgcaactgatttatcagattctggtagatcatcaccatctgtcact 1693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1634 gataatgattcatctgcaactgatttatcagattctggtagatcatcaccatctgtcact 1693


Query: 1694 tctccaaccctatctggtggtagaccacgtagaaatacagtttcgtctcgtaataataat 1753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1694 tctccaaccctatctggtggtagaccacgtagaaatacagtttcgtctcgtaataataat 1753


Query: 1754 gactctgaagaaagtgaaccagttaaagaattgactcatgcaactgcaagtagaccaaaa 1813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1754 gactctgaagaaagtgaaccagttaaagaattgactcatgcaactgcaagtagaccaaaa 1813


Query: 1814 tctggtggtcgtagacctccaactcgtaaatctggtacttctgctccaaatagatcagaa 1873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1814 tctggtggtcgtagacctccaactcgtaaatctggtacttctgctccaaatagatcagaa 1873


Query: 1874 tctccaactccaactcaaaaatccgattcagaatctgaaaaagtcagatcctcttcacca 1933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1874 tctccaactccaactcaaaaatccgattcagaatctgaaaaagtcagatcctcttcacca 1933


Query: 1934 attacaaccaaaccagttgtttctgaaccaacaaagaagactatttcaaatacatcattc 1993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1934 attacaaccaaaccagttgtttctgaaccaacaaagaagactatttcaaatacatcattc 1993


Query: 1994 tttgatgatattccatcagaaaaaacttctagtggtaaatcttcaccatctccaactatt 2053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1994 tttgatgatattccatcagaaaaaacttctagtggtaaatcttcaccatctccaactatt 2053


Query: 2054 aaatcaacatcagaaaaagttacaattgacccattaggtgatatctttgcatctactact 2113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2054 aaatcaacatcagaaaaagttacaattgacccattaggtgatatctttgcatctactact 2113


Query: 2114 actaaaccaactgcttctgaaaccaaagctgctctttcctctgctcctaaaaaatctgaa 2173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2114 actaaaccaactgcttctgaaaccaaagctgctctttcctctgctcctaaaaaatctgaa 2173


Query: 2174 ccagaaacaccaaaagaaacaccaaaagaaacac 2207
||||||||||||||||||||||||||||||||||
Sbjct: 2174 ccagaaacaccaaaagaaacaccaaaagaaacac 2207


Score = 688 bits (347), Expect = 0.0
Identities = 347/347 (100%)
Strand = Plus / Plus


Query: 1079 tcaagtaaagacttttttggtgatttggatactagtagcggtaataaaaaagttgaagaa 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 tcaagtaaagacttttttggtgatttggatactagtagcggtaataaaaaagttgaagaa 1138


Query: 1139 aagaaatcatcagattttgatagtttcttctctggtagtgatgatccattaggaattaca 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 aagaaatcatcagattttgatagtttcttctctggtagtgatgatccattaggaattaca 1198


Query: 1199 aaaccaaaatcaaagacaactactacaccaccacttacatctacaacagcaaatattgaa 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 aaaccaaaatcaaagacaactactacaccaccacttacatctacaacagcaaatattgaa 1258


Query: 1259 tctgatgatccactttcattaggtttaccaacattcacaaataacaacaataataataat 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 tctgatgatccactttcattaggtttaccaacattcacaaataacaacaataataataat 1318


Query: 1319 gcaaaaccacctccaccaccatcaccattaggagaggatgtaccatcaccattaacaagt 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1319 gcaaaaccacctccaccaccatcaccattaggagaggatgtaccatcaccattaacaagt 1378


Query: 1379 aataatacaaagaatagaactaaatcaattggatcaatgtttgaagc 1425
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1379 aataatacaaagaatagaactaaatcaattggatcaatgtttgaagc 1425


Score = 34.2 bits (17), Expect = 0.88
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 288 aacaacaacaacaagaa 304
|||||||||||||||||
Sbjct: 1440 aacaacaacaacaagaa 1456


>Contig-U13507-1 (Contig-U13507-1Q) /CSM_Contig/Contig-U13507-1Q.Seq.d
Length = 688

Score = 1180 bits (595), Expect = 0.0
Identities = 602/603 (99%), Gaps = 1/603 (0%)
Strand = Plus / Plus


Query: 1600 atcagaaaatgaagatgatagtagtacaaataatgataatgattcatctgcaactgattt 1659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atcagaaaatgaagatgatagtagtacaaataatgataatgattcatctgcaactgattt 146


Query: 1660 atcagattctggtagatcatcaccatctgtcacttctccaaccctatctggtggtagacc 1719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 atcagattctggtagatcatcaccatctgtcacttctccaaccctatctggtggtagacc 206


Query: 1720 acgtagaaatacagtttcgtctcgtaataataatgactctgaagaaagtgaaccagttaa 1779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 acgtagaaatacagtttcgtctcgtaataataatgactctgaagaaagtgaaccagttaa 266


Query: 1780 agaattgactcatgcaactgcaagtagaccaaaatctggtggtcgtagacctccaactcg 1839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agaattgactcatgcaactgcaagtagaccaaaatctggtggtcgtagacctccaactcg 326


Query: 1840 taaatctggtacttctgctccaaatagatcagaatctccaactccaactcaaaaatccga 1899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 taaatctggtacttctgctccaaatagatcagaatctccaactccaactcaaaaatccga 386


Query: 1900 ttcagaatctgaaaaagtcagatcctcttcaccaattacaaccaaaccagttgtttctga 1959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttcagaatctgaaaaagtcagatcctcttcaccaattacaaccaaaccagttgtttctga 446


Query: 1960 accaacaaagaagactatttcaaatacatcattctttgatgatattccatcagaaaaaac 2019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 accaacaaagaagactatttcaaatacatcattctttgatgatattccatcagaaaaaac 506


Query: 2020 ttctagtggtaaatcttcaccatctccaactattaaatcaacatcagaaaaagttacaat 2079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ttctagtggtaaatcttcaccatctccaactattaaatcaacatcagaaaaagttacaat 566


Query: 2080 tgacccattaggtgatatctttgcatctactactactaaaccaactgcttctgaaaccaa 2139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tgacccattaggtgatatctttgcatctactactactaaaccaactgcttctgaaaccaa 626


Query: 2140 agctgctctttcctctgctcctaaaaaatctgaaccagaaacaccaaaagaaacaccaaa 2199
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 627 agctgctctttcctctgctcctaaaaaatc-gaaccagaaacaccaaaagaaacaccaaa 685


Query: 2200 aga 2202
|||
Sbjct: 686 aga 688


Score = 147 bits (74), Expect = 9e-35
Identities = 74/74 (100%)
Strand = Plus / Plus


Query: 1079 tcaagtaaagacttttttggtgatttggatactagtagcggtaataaaaaagttgaagaa 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 tcaagtaaagacttttttggtgatttggatactagtagcggtaataaaaaagttgaagaa 78


Query: 1139 aagaaatcatcaga 1152
||||||||||||||
Sbjct: 79 aagaaatcatcaga 92


Score = 40.1 bits (20), Expect = 0.014
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 2188 agaaacaccaaaagaaacac 2207
||||||||||||||||||||
Sbjct: 662 agaaacaccaaaagaaacac 681


Score = 32.2 bits (16), Expect = 3.5
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 1491 ctgaaccaacaaagaa 1506
||||||||||||||||
Sbjct: 443 ctgaaccaacaaagaa 458


Score = 32.2 bits (16), Expect = 3.5
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 1460 aatagatcagaatcaccaac 1479
|||||||||||||| |||||
Sbjct: 349 aatagatcagaatctccaac 368


>Contig-U16557-1 (Contig-U16557-1Q) /CSM_Contig/Contig-U16557-1Q.Seq.d
Length = 489

Score = 634 bits (320), Expect = 0.0
Identities = 320/320 (100%)
Strand = Plus / Plus


Query: 531 ttgatgattcattatttggtgatgatgaaacagctttaccaacctctaaaaaagattcaa 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgatgattcattatttggtgatgatgaaacagctttaccaacctctaaaaaagattcaa 60


Query: 591 ctactacctcttcacaaccacaacaaaagaaaacattaaatgatttattcactgatgaag 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctactacctcttcacaaccacaacaaaagaaaacattaaatgatttattcactgatgaag 120


Query: 651 atctaacaccagcaaccaaaaaagaaacaaagaaatcatcatcacttagctttttggatg 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atctaacaccagcaaccaaaaaagaaacaaagaaatcatcatcacttagctttttggatg 180


Query: 711 gtatggatgaagatgatctatttggtactccaaaaccaaaatcaactacaacatcagcag 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtatggatgaagatgatctatttggtactccaaaaccaaaatcaactacaacatcagcag 240


Query: 771 caccaacagcaactactaccaaaccaccaactccaatacctgattcagatgcatcaggta 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caccaacagcaactactaccaaaccaccaactccaatacctgattcagatgcatcaggta 300


Query: 831 gtgagtcaacaactggtaaa 850
||||||||||||||||||||
Sbjct: 301 gtgagtcaacaactggtaaa 320


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 106,779
Number of Sequences: 8402
Number of extensions: 106779
Number of successful extensions: 25202
Number of sequences better than 10.0: 1105
length of query: 2207
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2190
effective length of database: 7,932,708
effective search space: 17372630520
effective search space used: 17372630520
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 4.12
Homology vs DNA
Query= Contig-U16556-1 (Contig-U16556-1Q) /CSM_Contig/Contig-U16556-1Q.Seq.d
(2207 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 1407 0.0 1
(BJ336393) Dictyostelium discoideum cDNA clone:dda53b24, 5' ... 1340 0.0 1
(BJ427018) Dictyostelium discoideum cDNA clone:ddv61c01, 5' ... 1289 0.0 1
(BJ394913) Dictyostelium discoideum cDNA clone:dds36p23, 5' ... 1193 0.0 1
(BJ433471) Dictyostelium discoideum cDNA clone:ddv22b03, 3' ... 1100 0.0 2
(BJ406944) Dictyostelium discoideum cDNA clone:dds36p23, 3' ... 1100 0.0 2
(BJ380680) Dictyostelium discoideum cDNA clone:ddc38o21, 3' ... 1100 0.0 2
(BJ354481) Dictyostelium discoideum cDNA clone:dda53b24, 3' ... 1092 0.0 2
(BJ445605) Dictyostelium discoideum cDNA clone:ddv60d01, 3' ... 1061 0.0 2
(BJ352282) Dictyostelium discoideum cDNA clone:dda46a10, 3' ... 688 0.0 3
(BJ445906) Dictyostelium discoideum cDNA clone:ddv61c01, 3' ... 672 0.0 4
(BJ403901) Dictyostelium discoideum cDNA clone:dds26m13, 3' ... 636 0.0 4
(BJ409629) Dictyostelium discoideum cDNA clone:dds42b19, 3' ... 652 0.0 3
(BJ408993) Dictyostelium discoideum cDNA clone:dds47l18, 3' ... 652 0.0 3
(BJ395686) Dictyostelium discoideum cDNA clone:dds39e20, 5' ... 613 e-170 1
(BJ340217) Dictyostelium discoideum cDNA clone:dda12m02, 3' ... 307 e-153 4
(BJ436316) Dictyostelium discoideum cDNA clone:ddv30d20, 3' ... 357 e-120 2
(BJ380967) Dictyostelium discoideum cDNA clone:ddc39l21, 3' ... 412 e-115 2
(BJ405777) Dictyostelium discoideum cDNA clone:dds32o21, 3' ... 224 1e-85 3
(BJ437415) Dictyostelium discoideum cDNA clone:ddv34o01, 3' ... 278 2e-82 5
(BJ446202) Dictyostelium discoideum cDNA clone:ddv62a05, 3' ... 170 1e-37 1
(BJ366690) Dictyostelium discoideum cDNA clone:ddc39l21, 5' ... 155 6e-34 3
(BJ415258) Dictyostelium discoideum cDNA clone:ddv22b03, 5' ... 147 1e-31 3
(BJ444149) Dictyostelium discoideum cDNA clone:ddv55l12, 3' ... 88 1e-28 4
(BJ366432) Dictyostelium discoideum cDNA clone:ddc38o21, 5' ... 82 1e-10 1
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ... 42 1e-10 19
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 44 1e-09 13
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 52 1e-09 12
(FM992695) Candida dubliniensis CD36 chromosome R, complete ... 42 2e-09 17
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 44 9e-09 11
(BJ425339) Dictyostelium discoideum cDNA clone:ddv55l12, 5' ... 72 1e-07 1
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 44 1e-07 11
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 50 3e-07 13
(AC116919) Dictyostelium discoideum chromosome 2 map complem... 36 6e-07 10
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 42 1e-06 12
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 42 1e-06 10
(CT808578) Paramecium tetraurelia 5-PRIME EST from clone LK0... 38 1e-06 5
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 36 1e-06 11
(AC171131) Helobdella robusta clone CH306-1A2, complete sequ... 42 2e-06 10
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 42 2e-06 11
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 40 2e-06 9
(FE116688) LV_HC_RA064H10r Litopenaeus vannamei hemocyte cDN... 36 4e-06 6
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 42 6e-06 10
(AC171127) Helobdella robusta clone CH306-1A1, complete sequ... 42 6e-06 11
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 40 8e-06 12
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ... 38 9e-06 14
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 42 1e-05 12
(EY387462) CAXA6773.rev CAXA Helobdella robusta Subtracted L... 40 1e-05 6
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 36 2e-05 12
(FM992689) Candida dubliniensis CD36 chromosome 2, complete ... 44 3e-05 12
(EY325432) CAWY10933.rev CAWY Helobdella robusta Subtracted ... 40 5e-05 4
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 36 6e-05 9
(AY484465) Dictyostelium discoideum kinesin family member 12... 34 1e-04 6
(EY378881) CAXA17496.fwd CAXA Helobdella robusta Subtracted ... 44 1e-04 3
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 36 1e-04 12
(FM992694) Candida dubliniensis CD36 chromosome 7, complete ... 42 1e-04 15
(EL509403) G10_PF-SAU3A-T3-M-P18_D.AB1 Blood stage Plasmodiu... 42 1e-04 2
(EL509402) G10_PF-SAU3A-T3-M-P18.AB1 Blood stage Plasmodium ... 42 1e-04 2
(BJ346089) Dictyostelium discoideum cDNA clone:dda29f06, 3' ... 34 2e-04 5
(AY557974) Saccharomyces cerevisiae clone FLH005081.01X YML0... 44 2e-04 3
(AY254473) Dictyostelium discoideum nucleotide exchange fact... 38 3e-04 6
(AC171141) Helobdella robusta clone CH306-1B3, complete sequ... 38 3e-04 9
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 38 3e-04 9
(AC117082) Dictyostelium discoideum chromosome 2 map complem... 40 4e-04 8
(AB211596) Dictyostelium discoideum DrbA gene for retinoblas... 36 4e-04 6
(DY925798) CHAY9312.b1_O23.ab1 CHA(XYZ) common wild sunflowe... 60 4e-04 1
(AC201316) Strongylocentrotus purpuratus clone R3-16K24, WOR... 46 6e-04 9
(AC179575) Strongylocentrotus purpuratus clone R3-8O3, WORKI... 36 6e-04 9
(EY388949) CAXA7580.rev CAXA Helobdella robusta Subtracted L... 36 6e-04 5
(DL130992) Bax-responsive genes for drug target identificati... 44 7e-04 3
(AX536694) Sequence 295 from Patent WO02064766. 44 7e-04 3
(AR941552) Sequence 295 from patent US 7101990. 44 7e-04 3
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 42 7e-04 9
(FF911751) CBWU56089.b1 Yutaka Satou unpublished cDNA librar... 32 7e-04 5
(FM992691) Candida dubliniensis CD36 chromosome 4, complete ... 42 7e-04 13
(EY388764) CAXA7481.rev CAXA Helobdella robusta Subtracted L... 36 8e-04 5
(FG684128) G1143P313RL2.T0 Anolis carolinensis pooled normal... 34 8e-04 5
(EY367426) CAXA11258.rev CAXA Helobdella robusta Subtracted ... 36 8e-04 5
(AC209512) Solanum lycopersicum chromosome 6 clone C06HBa025... 48 9e-04 10
(BJ389363) Dictyostelium discoideum cDNA clone:dds18p10, 5' ... 34 0.001 4
(EY336967) CAWY803.fwd CAWY Helobdella robusta Subtracted Ea... 42 0.001 4
(EY370200) CAXA12786.fwd CAXA Helobdella robusta Subtracted ... 42 0.001 3
(BJ423322) Dictyostelium discoideum cDNA clone:ddv48f21, 5' ... 36 0.001 4
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 46 0.001 13
(BJ442743) Dictyostelium discoideum cDNA clone:ddv50h22, 3' ... 58 0.002 1
(BJ440365) Dictyostelium discoideum cDNA clone:ddv43o12, 3' ... 58 0.002 1
(BJ438671) Dictyostelium discoideum cDNA clone:ddv38j06, 3' ... 58 0.002 1
(BJ383579) Dictyostelium discoideum cDNA clone:ddc53c16, 3' ... 58 0.002 1
(BJ379174) Dictyostelium discoideum cDNA clone:ddc34c03, 3' ... 58 0.002 1
(BJ358147) Dictyostelium discoideum cDNA clone:dda65k24, 3' ... 58 0.002 1
(BJ358123) Dictyostelium discoideum cDNA clone:dda65g21, 3' ... 58 0.002 1
(BJ356133) Dictyostelium discoideum cDNA clone:dda59i09, 3' ... 58 0.002 1
(BJ355964) Dictyostelium discoideum cDNA clone:dda58e21, 3' ... 58 0.002 1
(BJ347895) Dictyostelium discoideum cDNA clone:dda31d13, 3' ... 58 0.002 1
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 42 0.002 12
(M86518) Plasmodium falciparum high mobility group-like prot... 42 0.002 3
(BW029045) Ciona intestinalis cDNA, clone:cibd011e24, 5' end... 30 0.002 5
(FF781642) XABT80654.fwd Gateway compatible cien cDNA librar... 30 0.002 5
(BW288882) Ciona intestinalis cDNA, clone:cigd037k09, 5' end... 30 0.002 5
(AR551092) Sequence 6223 from patent US 6747137. 32 0.002 5
(AU060192) Dictyostelium discoideum slug cDNA, clone SLA546. 34 0.002 4
(EL509265) G06_PF-SAU3A-T3-S-P26.AB1 Blood stage Plasmodium ... 42 0.002 2
(AU040023) Dictyostelium discoideum slug cDNA, clone SLH468. 42 0.003 3
(DY890628) CeleSEQ9797 Cunninghamella elegans pBluescript (E... 32 0.003 5
(EY304934) CAWX18974.fwd CAWX Helobdella robusta Primary Ear... 36 0.003 4
(C93122) Dictyostelium discoideum slug cDNA, clone SSM579. 42 0.003 3
(EY332428) CAWY4850.fwd CAWY Helobdella robusta Subtracted E... 36 0.003 4
(DH514353) Rattus norvegicus DNA, BAC clone: RNB1-009I02, 3'... 44 0.004 3
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 34 0.004 11
(BH325544) CH230-174C15.TV CHORI-230 Segment 1 Rattus norveg... 36 0.004 4
(DH801469) Rattus norvegicus DNA, BAC clone: RNB1-397C03, 5'... 44 0.004 3
(FM992693) Candida dubliniensis CD36 chromosome 6, complete ... 44 0.004 14
(EY317940) CAWX595.fwd CAWX Helobdella robusta Primary Early... 38 0.004 4
(L29075) Dictyostelium discoideum G-box binding factor (GBF... 38 0.004 5
(AC095162) Rattus norvegicus clone CH230-8K18, WORKING DRAFT... 42 0.004 2
(AC181223) Strongylocentrotus purpuratus clone R3-4009M09, W... 36 0.004 10
(CD162738) ML1-0081T-M263-F06-U.G ML1-0081 Schistosoma manso... 40 0.004 4
(EL509762) H06_PF-SAU3A-T3-M-P18_D.AB1 Blood stage Plasmodiu... 36 0.004 3
(EL509761) H06_PF-SAU3A-T3-M-P18.AB1 Blood stage Plasmodium ... 36 0.004 3
(DT740685) EST1174534 Aquilegia cDNA library Aquilegia formo... 46 0.005 3
(DT731959) EST1165809 Aquilegia cDNA library Aquilegia formo... 46 0.005 3
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084... 44 0.005 8
(AC115606) Dictyostelium discoideum chromosome 2 map 159760-... 44 0.005 8
(Z37981) D.discoideum gene for protein kinase. 36 0.005 5
(AU033955) Dictyostelium discoideum slug cDNA, clone SLB655. 42 0.005 2
(EY383972) CAXA4888.fwd CAXA Helobdella robusta Subtracted L... 42 0.005 3
(AF362374) Dictyostelium discoideum histidine kinase DhkM (d... 42 0.005 5
(AU053571) Dictyostelium discoideum slug cDNA, clone SLJ137. 32 0.006 3
(FM992692) Candida dubliniensis CD36 chromosome 5, complete ... 42 0.006 14
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 38 0.006 12
(AM440777) Vitis vinifera contig VV78X228373.11, whole genom... 38 0.007 4
(EY337254) CAWY8208.rev CAWY Helobdella robusta Subtracted E... 36 0.007 4
(AL844507) Plasmodium falciparum chromosome 8. 44 0.007 10
(CF777725) tad15b07.x1 Hydra EST -IV Hydra magnipapillata cD... 46 0.007 3
(EY384299) CAXA5074.rev CAXA Helobdella robusta Subtracted L... 36 0.007 4
(EY386722) CAXA6377.rev CAXA Helobdella robusta Subtracted L... 36 0.007 4
(BW000459) Ciona intestinalis cDNA, clone:rcibd011e24, 3' en... 30 0.007 5
(EY325946) CAWY11274.fwd CAWY Helobdella robusta Subtracted ... 34 0.007 4
(BJ360126) Dictyostelium discoideum cDNA clone:ddc4o07, 5' e... 40 0.008 3
(CR954227) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.008 10
(DL131174) Bax-responsive genes for drug target identificati... 34 0.008 11
(AX537058) Sequence 659 from Patent WO02064766. 34 0.008 11
(AR941734) Sequence 659 from patent US 7101990. 34 0.008 11
(BJ366220) Dictyostelium discoideum cDNA clone:ddc38o03, 5' ... 38 0.008 3
(AQ935224) CpG2216B CpIOWAgDNA1 Cryptosporidium parvum genom... 38 0.008 4
(EY333291) CAWY5588.fwd CAWY Helobdella robusta Subtracted E... 36 0.008 4
(EI958170) SB_BBc222-I01.F SB_BBc Sorghum bicolor genomic 5'... 34 0.009 4
(EY376156) CAXA16022.rev CAXA Helobdella robusta Subtracted ... 36 0.009 4
(AU060920) Dictyostelium discoideum slug cDNA, clone SLC242. 40 0.009 3
(CK716370) 16017 Swollen Stolon Solanum tuberosum cDNA, mRNA... 38 0.010 3
(G90618) S208P6583FD3.T0 129S1/SvImJ Mus musculus STS genomi... 50 0.010 2
(ER731965) SB_BBc27-K03.F SB_BBc Sorghum bicolor genomic 5',... 34 0.010 4
(ER701969) SB_BBc19-F18.F SB_BBc Sorghum bicolor genomic 5',... 34 0.011 4
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 48 0.011 10
(AY428796) Dictyostelium discoideum DIF insensitive mutant A... 36 0.011 6
(EL492790) A02_PFBAMHI-M-T3-PLATE4A.AB1 Blood stage Plasmodi... 36 0.011 3
(DJ008369) Methods and Compositions for Differentiating Tiss... 36 0.011 5
(CS039271) Sequence 81 from Patent WO2005019477. 36 0.011 5
(EL494360) C10_PFBAMHI-M-T7-PLATE19A.AB1 Blood stage Plasmod... 36 0.012 3
(AE015929) Staphylococcus epidermidis ATCC 12228, complete g... 36 0.012 24
(FG684080) G1143P313FL2.T0 Anolis carolinensis pooled normal... 32 0.012 5
(AG412130) Mus musculus molossinus DNA, clone:MSMg01-273A01.... 50 0.012 2
(AF310889) Dictyostelium discoideum RacD (racD) gene, comple... 40 0.013 8
(AF238312) Dictyostelium discoideum putative serine-threonin... 40 0.013 4
(AF466309) Dictyostelium discoideum serine protease/ABC tran... 50 0.013 3
(FD716680) CAAA2363.fwd CAAA Petromyzon marinus Petromyzon m... 40 0.013 3
(EL496211) F12_PFBAMHI-M-T7-PLATE21A.AB1 Blood stage Plasmod... 40 0.014 3
(EY356558) CAWZ4421.fwd CAWZ Helobdella robusta Primary Late... 42 0.014 3
(AE017263) Mesoplasma florum L1 complete genome. 34 0.014 24
(EB307505) CNSN01-F-068601-501 Normalized CNS library (juven... 32 0.015 4
(AM537049) Paracentrotus lividus EST, clone MPMGp1171C1098Q,... 42 0.015 3
(EL503506) H04_PFLAB1-L-PLATE19B.AB1 Blood stage Plasmodium ... 36 0.015 3
(M38703) Dictyostelium discoideum protein kinase (GPK2) gene... 36 0.015 5
(EY345061) CAWZ13646.fwd CAWZ Helobdella robusta Primary Lat... 44 0.015 2
(EY365312) CAXA10118.fwd CAXA Helobdella robusta Subtracted ... 40 0.015 3
(AF088979) Dictyostelium discoideum beige protein homolog (l... 42 0.015 6
(AC093336) Mus musculus chromosome 1, clone RP23-40E2, compl... 42 0.016 2
(CU459050) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***... 42 0.016 2
(DR914965) EST1106504 Aquilegia cDNA library Aquilegia formo... 42 0.016 3
(EY310575) CAWX22226.rev CAWX Helobdella robusta Primary Ear... 36 0.016 4
(AU270454) Dictyostelium discoideum vegetative cDNA clone:VS... 34 0.017 4
(BJ373640) Dictyostelium discoideum cDNA clone:ddc4a10, 3' e... 34 0.017 4
(EY407715) pOP-EAP01955_EST_C_1_pBSK_SK EA (Oil Palm Embryoi... 32 0.017 4
(DR077399) Lr_Cd2CF_62E07_M13R Earthworm Cadmium Exposure Li... 38 0.017 3
(FC810052) Sr_pASP6_03a11_SP6 S. ratti mixed stage pAMP Stro... 44 0.018 3
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6... 36 0.018 13
(EY373001) CAXA14316.fwd CAXA Helobdella robusta Subtracted ... 36 0.018 4
(FE756731) CAYF521.g1 CAYF Petrolisthes cinctipes heart, who... 34 0.019 4
(G37819) HMGLP Plasmodium falciparum haploid Plasmodium falc... 38 0.019 3
(AC154877) Mus musculus chromosome 3 clone RP23-302E5 map 3,... 48 0.020 9
(AU060996) Dictyostelium discoideum slug cDNA, clone SLC554. 38 0.020 3
(AU060154) Dictyostelium discoideum slug cDNA, clone SLA450. 34 0.020 4
(AC196001) Zea mays chromosome 6 clone CH201-160N8; ZMMBBc01... 42 0.021 8
(AC109679) Rattus norvegicus clone CH230-91E15, *** SEQUENCI... 44 0.021 6
(AC115581) Dictyostelium discoideum chromosome 2 map complem... 42 0.021 10
(AL844509) Plasmodium falciparum chromosome 13. 44 0.022 9
(AL731717) Mouse DNA sequence from clone RP23-92C4 on chromo... 54 0.024 1
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 54 0.024 1
(ED932531) OA_CBa0136B03.r OA_CBa Oryza australiensis genomi... 54 0.024 1
(CW932781) EDCCF29TF A. castellanii, 6-8 kb library from tot... 54 0.024 1
(EL349521) CCEL591.b1_M04.ab1 CCE(LMS) endive Cichorium endi... 54 0.024 1
(EL348221) CCEL4357.b1_J09.ab1 CCE(LMS) endive Cichorium end... 54 0.024 1
(EL344642) CCEL12553.b1_A20.ab1 CCE(LMS) endive Cichorium en... 54 0.024 1
(EL343958) CCEL11925.b1_I05.ab1 CCE(LMS) endive Cichorium en... 54 0.024 1
(AC181963) Strongylocentrotus purpuratus clone R3-1001N03, W... 36 0.025 8
(BJ438226) Dictyostelium discoideum cDNA clone:ddv36c20, 3' ... 42 0.025 4
(U97128) Plasmodium falciparum HMG-like protein Pf16 (Pf16) ... 48 0.026 2
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 38 0.026 9
(AC092943) Homo sapiens 3 BAC RP11-564C24 (Roswell Park Canc... 46 0.026 7
(AC005507) Plasmodium falciparum chromosome 12 clone PFYACB8... 42 0.028 11
(AK113828) Ciona intestinalis cDNA, clone:cicl011c19, full i... 30 0.028 5
(BJ381635) Dictyostelium discoideum cDNA clone:ddc42m04, 3' ... 42 0.029 2
(AU269438) Dictyostelium discoideum vegetative cDNA clone:VS... 34 0.030 4
(EH765771) CNSM11776.b1_O16.ab1 CNS(LMS) yellow starthistle ... 42 0.030 4
(EY340825) CAWZ10830.fwd CAWZ Helobdella robusta Primary Lat... 36 0.031 4
(DE228783) Trifolium pratense DNA, clone:RCG21752. 36 0.031 3
(DE228695) Trifolium pratense DNA, clone:RCG21652. 36 0.031 3
(DE226241) Trifolium pratense DNA, clone:RCG18638. 36 0.031 3
(AK116677) Ciona intestinalis cDNA, clone:cicl054o20, full i... 30 0.033 5
(DT745923) EST1179772 Aquilegia cDNA library Aquilegia formo... 36 0.034 4
(BJ429312) Dictyostelium discoideum cDNA clone:ddv3e03, 3' e... 42 0.034 2
(BJ380759) Dictyostelium discoideum cDNA clone:ddc39a07, 3' ... 42 0.035 2
(EY363674) CAWZ890.fwd CAWZ Helobdella robusta Primary Late ... 36 0.035 4
(BJ330059) Dictyostelium discoideum cDNA clone:dda27b08, 5' ... 38 0.035 3
(CT573264) Zebrafish DNA sequence from clone DKEY-262J3 in l... 38 0.036 8
(EY310364) CAWX22107.fwd CAWX Helobdella robusta Primary Ear... 38 0.037 5
(EH790724) CNSS437.b2_I13.ab1 CNS(LMS) yellow starthistle Ce... 42 0.037 4
(DW405293) ES-N-S03-0113-W Penaeus monodon Eyestalk cDNA lib... 44 0.037 3
(BJ375915) Dictyostelium discoideum cDNA clone:ddc20d13, 3' ... 42 0.037 2
(EY353714) CAWZ2266.fwd CAWZ Helobdella robusta Primary Late... 36 0.037 4
(AC179855) Strongylocentrotus purpuratus clone R3-1007I10, W... 38 0.037 7
(BJ376601) Dictyostelium discoideum cDNA clone:ddc29p02, 3' ... 42 0.037 2
(AR558324) Sequence 13455 from patent US 6747137. 36 0.038 4
(DJ008301) Methods and Compositions for Differentiating Tiss... 36 0.038 5
(CS039203) Sequence 13 from Patent WO2005019477. 36 0.038 5
(DC598710) Lotus japonicus mRNA, clone: MR003e05_r, 5' end s... 42 0.038 2
(BJ379189) Dictyostelium discoideum cDNA clone:ddc34f02, 3' ... 42 0.039 2
(BJ383359) Dictyostelium discoideum cDNA clone:ddc52c19, 3' ... 42 0.039 2
(EX162533) MW_DP0531 Dermatophagoides pteronyssinus cDNA lib... 42 0.039 3
(AY160100) Dictyostelium discoideum nucleotide exchange fact... 38 0.039 4
(DW405440) ES-N-S03-0400-W Penaeus monodon Eyestalk cDNA lib... 42 0.040 3
(BJ354379) Dictyostelium discoideum cDNA clone:dda53n08, 3' ... 42 0.041 2
(FK757919) av01018a06r1.1 Symbiotic sea anemone (Anemonia vi... 48 0.041 3
(AY232271) Dictyostelium discoideum putative protein Roco9 (... 42 0.041 5
(BJ379132) Dictyostelium discoideum cDNA clone:ddc33j24, 3' ... 42 0.041 2
(BJ372427) Dictyostelium discoideum cDNA clone:ddc12g15, 3' ... 42 0.041 2
(FE811226) CCAG29682.g1 CCAG Petrolisthes cinctipes heart, g... 42 0.041 2
(DL266953) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS. 36 0.041 4
(DJ133402) Method for identification of useful proteins deri... 36 0.041 4
(BJ386551) Dictyostelium discoideum cDNA clone:ddc58j13, 3' ... 42 0.041 2
(BJ390296) Dictyostelium discoideum cDNA clone:dds21l23, 5' ... 42 0.042 3
(BJ378783) Dictyostelium discoideum cDNA clone:ddc32g21, 3' ... 42 0.042 2
(AU263189) Dictyostelium discoideum vegetative cDNA clone:VS... 34 0.042 4
(EY373256) CAXA14461.rev CAXA Helobdella robusta Subtracted ... 36 0.042 3
(AC177064) Strongylocentrotus purpuratus clone R3-4004H24, W... 36 0.043 10
(BJ379844) Dictyostelium discoideum cDNA clone:ddc36m05, 3' ... 42 0.043 2
(AU270342) Dictyostelium discoideum vegetative cDNA clone:VS... 36 0.043 4
(BJ346824) Dictyostelium discoideum cDNA clone:dda25n02, 3' ... 42 0.044 2
(EH009665) USDA-FP_182840 Lysiphlebus testaceipes adult whol... 38 0.044 3
(AY293825) Dictyostelium discoideum transposon cluster; tRNA... 34 0.044 6
(AU052743) Dictyostelium discoideum slug cDNA, clone SLD872. 30 0.045 4
(BJ383502) Dictyostelium discoideum cDNA clone:ddc53c10, 3' ... 42 0.045 2
(BJ354263) Dictyostelium discoideum cDNA clone:dda53f06, 3' ... 42 0.045 2
(BJ352384) Dictyostelium discoideum cDNA clone:dda46g13, 3' ... 42 0.046 2
(BJ357596) Dictyostelium discoideum cDNA clone:dda64e06, 3' ... 42 0.046 2
(EX163532) LY_YIT_DP1641 Dermatophagoides pteronyssinus cDNA... 38 0.047 3
(BJ441628) Dictyostelium discoideum cDNA clone:ddv47f12, 3' ... 42 0.047 2
(DW156352) CLVX8392.b1_P10.ab1 CLV(XYZ) lettuce virosa Lactu... 48 0.047 2
(EY350733) CAWZ17750.rev CAWZ Helobdella robusta Primary Lat... 38 0.047 3
(AL954656) Zebrafish DNA sequence from clone CH211-67N10 in ... 48 0.048 9
(AC184665) Strongylocentrotus purpuratus clone R3-3068G5, WO... 40 0.049 7
(EY296728) CAWX12973.rev CAWX Helobdella robusta Primary Ear... 38 0.049 3
(DW145191) CLVX10263.b1_M22.ab1 CLV(XYZ) lettuce virosa Lact... 48 0.050 2
(FK759690) av02060a20r1.1 Symbiotic sea anemone (Anemonia vi... 48 0.050 3
(EY370435) CAXA12913.rev CAXA Helobdella robusta Subtracted ... 38 0.050 3
(FM966158) Glossina morsitans morsitans EST, clone GMsg12f04... 40 0.051 3
(EY369440) CAXA12364.rev CAXA Helobdella robusta Subtracted ... 38 0.051 3
(EY450506) CBAZ423.rev CBAZ Tubifex tubifex Embryos and juve... 42 0.051 2
(AZ195404) SP_1030_A1_D09_SP6E Strongylocentrotus purpuratus... 36 0.051 3
(AL181423) Tetraodon nigroviridis genome survey sequence PUC... 44 0.053 3
(EY391597) CAXA9355.rev CAXA Helobdella robusta Subtracted L... 44 0.053 3
(FK724153) av02100l05r1.1 Symbiotic sea anemone (Anemonia vi... 48 0.054 3
(CL080652) CH216-159D22_RM4.1 CH216 Xenopus (Silurana) tropi... 36 0.055 4
(AC116955) Dictyostelium discoideum chromosome 2 map 5455881... 34 0.055 10
(EY366988) CAXA11019.fwd CAXA Helobdella robusta Subtracted ... 44 0.056 3
(EY296729) CAWX12973.fwd CAWX Helobdella robusta Primary Ear... 38 0.056 3
(FG298839) 1108793322637 New World Screwworm Larvae 9387 EST... 36 0.057 5
(EY294154) CAWX11519.fwd CAWX Helobdella robusta Primary Ear... 40 0.057 3
(AC107473) Rattus norvegicus clone CH230-104D19, *** SEQUENC... 36 0.057 2
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ... 42 0.057 2
(AC113922) Rattus norvegicus clone CH230-19N23, WORKING DRAF... 42 0.057 2
(AC134037) Rattus norvegicus clone CH230-109L24, WORKING DRA... 36 0.057 2
(AC119312) Rattus norvegicus clone CH230-342E8, WORKING DRAF... 36 0.057 2
(AC160469) Mus musculus chromosome 5, clone RP23-318I19, com... 42 0.058 2
(AC108828) Mus musculus chromosome 5, clone RP23-153H17, com... 42 0.058 2
(AC004709) Plasmodium falciparum chromosome 12, *** SEQUENCI... 42 0.058 2
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69... 42 0.058 2
(AC210880) Zea mays chromosome 5 clone CH201-574L8; ZMMBBc05... 44 0.059 5
(AC179168) Strongylocentrotus purpuratus clone R3-4016G13, W... 38 0.059 2
(ES608215) MDLTEa0001C23f MDLTEa Musca domestica cDNA, mRNA ... 36 0.059 3
(AC171134) Helobdella robusta clone CH306-1A5, complete sequ... 42 0.059 8
(DY889978) CeleSEQ6983 Cunninghamella elegans pBluescript (E... 42 0.059 3
(AC016734) Homo sapiens BAC clone RP11-391A7 from 2, complet... 36 0.061 11
(EY340557) CAWZ10338.fwd CAWZ Helobdella robusta Primary Lat... 46 0.063 3
(AL429506) clone BA0AB032A11 of library BA0AB from strain CL... 38 0.064 3
(FM971539) Glossina morsitans morsitans EST, clone GMsg102d0... 36 0.065 3
(EY360188) CAWZ690.fwd CAWZ Helobdella robusta Primary Late ... 38 0.065 3
(EY362433) CAWZ8247.rev CAWZ Helobdella robusta Primary Late... 34 0.065 4
(ER762921) SB_BBc136-O13.R SB_BBc Sorghum bicolor genomic 3'... 36 0.066 3
(AL591766) Human DNA sequence from clone RP11-429N14 on chro... 44 0.066 5
(AC116032) Dictyostelium discoideum chromosome 2 map 4158743... 42 0.069 3
(DY886225) CeleSEQ1791 Cunninghamella elegans pBluescript (E... 42 0.070 3
(FE058020) LV_ES_RA28N21f Litopenaeus vannamei eyestalk cDNA... 34 0.071 4
(EL497631) PFLAB1-L_F3_-P12A_D07_07.AB1 Blood stage Plasmodi... 40 0.073 3
(CR218708) Reverse strand read from insert in 5'HPRT inserti... 42 0.074 2
(EY364092) CAWZ9130.fwd CAWZ Helobdella robusta Primary Late... 34 0.074 4
(BJ354801) Dictyostelium discoideum cDNA clone:dda54e21, 3' ... 34 0.075 4
(AR550039) Sequence 5170 from patent US 6747137. 44 0.076 3
(AF128626) Dictyostelium discoideum RNA binding protein PufA... 38 0.077 4
(BU577076) sar72c01.y1 Gm-c1074 Glycine max cDNA clone SOYBE... 44 0.078 3
(AC113689) Rattus norvegicus clone CH230-52J21, *** SEQUENCI... 40 0.078 12
(EY345593) CAWZ14098.fwd CAWZ Helobdella robusta Primary Lat... 36 0.083 4
(DY890701) CeleSEQ9906 Cunninghamella elegans pBluescript (E... 32 0.083 4
(AC181961) Strongylocentrotus purpuratus clone R3-1002H24, W... 36 0.084 9
(AQ743346) HS_5387_B2_F06_SP6 RPCI-11 Human Male BAC Library... 32 0.084 5
(CU800599) A BAC library has been constructed from PN40024 g... 36 0.086 3
(AC114261) Dictyostelium discoideum chromosome 2 map 126059-... 34 0.088 9
(Z46729) S.cerevisiae chromosome XIII cosmid 9958. 44 0.090 4
(AY263399) Dictyostelium discoideum strain Ax2 sombrero SmbA... 40 0.092 3
(CU302241) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 52 0.094 1
(AL440060) T7 end of clone BD0AA009F12 of library BD0AA from... 44 0.094 3
(FH690690) CHO_OF5100xp06f1.ab1 CHO_OF5 Nicotiana tabacum ge... 40 0.098 2
(AE014298) Drosophila melanogaster chromosome X, complete se... 40 0.10 16
(EY320821) CAWX758.fwd CAWX Helobdella robusta Primary Early... 40 0.10 3
(AF362376) Dictyostelium discoideum histidine kinase DhkK (d... 40 0.11 3
(AC115683) Dictyostelium discoideum chromosome 2 map complem... 36 0.11 7
(BM526984) sal48b11.y1 Gm-c1061 Glycine max cDNA clone SOYBE... 44 0.11 3
(FP236399) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.11 5
(AW756439) sl21d06.y1 Gm-c1036 Glycine max cDNA clone GENOME... 44 0.11 3
(BG238594) sab52b02.y1 Gm-c1043 Glycine max cDNA clone GENOM... 44 0.11 3
(BG162645) de35c05.y1 Wellcome CRC pRN3 dorsal lip Xenopus l... 40 0.11 2
(AM214288) Paracentrotus lividus EST, clone MPMGp1174D172Q, ... 38 0.11 3
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117... 34 0.12 8
(AC178230) Strongylocentrotus purpuratus clone R3-3085O18, W... 42 0.12 7
(BU577769) sar92c11.y1 Gm-c1074 Glycine max cDNA clone SOYBE... 44 0.12 3
(EY339244) CAWY9548.fwd CAWY Helobdella robusta Subtracted E... 34 0.12 4
(AC221829) Bos taurus clone CH240-384G11, WORKING DRAFT SEQU... 40 0.12 7
(DY892336) CeleSEQ10532 Cunninghamella elegans pBluescript (... 32 0.12 4
(DH697745) Rattus norvegicus DNA, BAC clone: RNB1-256M23, 5'... 36 0.12 3
(FP017197) Zebrafish DNA sequence from clone CH73-202G8 in l... 38 0.12 10
(AC201661) Strongylocentrotus purpuratus clone R3-3078N16, W... 42 0.13 7
(AM220560) Paracentrotus lividus EST, clone MPMGp1174P0744Q,... 38 0.13 3
(CR509309) mth4-20K15FM1 BAC end, cultivar Jemalong A17 of M... 38 0.13 4
(DY892080) CeleSEQ8988 Cunninghamella elegans pBluescript (E... 32 0.13 4
(AC179605) Strongylocentrotus purpuratus clone R3-1028O3, WO... 36 0.14 9
(AL929359) Plasmodium falciparum strain 3D7, chromosome 9; s... 38 0.14 11
(BX567783) Glossina morsitans morsitans (Tseatse fly) EST fr... 40 0.14 2
(AC161269) Mus musculus BAC clone RP23-120K16 from chromosom... 36 0.14 7
(BP681235) Xenopus laevis NBRP cDNA clone:XL437c16ex, 5' end. 40 0.14 2
(BX567780) Glossina morsitans morsitans (Tseatse fly) EST fr... 40 0.14 2
(AM187386) Paracentrotus lividus EST, clone MPMGp1172F1618Q,... 38 0.14 3
(FE395356) CBTP2659.rev CBTP_Daphnia_pulex_Chosen_One_Librar... 34 0.14 4
(ES543568) Kr_K06_03D05_attB1_seq K06 Euphausia superba cDNA... 34 0.14 3
(BP680200) Xenopus laevis NBRP cDNA clone:XL434c10ex, 5' end. 40 0.14 2
(BP682248) Xenopus laevis NBRP cDNA clone:XL403c12ex, 5' end. 40 0.14 2
(AC198143) Pongo abelii BAC clone CH276-273K19 from chromoso... 44 0.15 3
(BJ403032) Dictyostelium discoideum cDNA clone:dds18h03, 3' ... 42 0.15 2
(U32174) Dictyostelium discoideum spore lysis A (splA) gene,... 36 0.15 7
(DY889940) CeleSEQ6930 Cunninghamella elegans pBluescript (E... 32 0.15 4
(BG581108) EST482838 GVN Medicago truncatula cDNA clone pGVN... 38 0.15 4
(AC179084) Strongylocentrotus purpuratus clone R3-4009J08, W... 46 0.16 8
(AW694596) NF078A10ST1F1072 Developing stem Medicago truncat... 38 0.16 4
(AC020019) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 34 0.16 6
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 34 0.16 2
(DY893493) CeleSEQ12844 Cunninghamella elegans pBluescript (... 42 0.16 2
(FD382496) CeSi_F9_T3_H07_049 Ceratonia siliqua flowers cDNA... 38 0.16 2
(EC762070) PSE00008269 rw_mgpallid Polysphondylium pallidum ... 34 0.16 3
(AP006852) Candida albicans genomic DNA, chromosome 7, compl... 38 0.17 13
(FB876876) Sequence 96149 from Patent WO2008034648. 50 0.17 2
(FB862918) Sequence 82191 from Patent WO2008034648. 50 0.17 2
(FB841878) Sequence 61151 from Patent WO2008034648. 50 0.17 2
(DY886465) CeleSEQ2131 Cunninghamella elegans pBluescript (E... 32 0.17 4
(EL402730) CFFS1386.b1_C12.ab1 CFF(LMS) safflower Carthamus ... 40 0.17 3
(AM539103) Paracentrotus lividus EST, clone MPMGp1171P12194Q... 38 0.17 3
(BX211144) Danio rerio genomic clone DKEY-264I15, genomic su... 46 0.17 2
(EY353565) CAWZ2177.rev CAWZ Helobdella robusta Primary Late... 40 0.17 2
(DC117449) Xenopus laevis NBRP cDNA clone:xl279k20, 5' end. 40 0.17 2
(AM219168) Paracentrotus lividus EST, clone MPMGp1174D1141Q,... 38 0.17 3
(BJ350580) Dictyostelium discoideum cDNA clone:dda40j08, 3' ... 34 0.17 3
(EH014617) USDA-FP_187299 Lysiphlebus testaceipes adult whol... 36 0.17 3
(AZ138674) SP_0170_A2_D02_SP6E Strongylocentrotus purpuratus... 38 0.17 3
(BZ333263) hx56g11.b1 WGS-SbicolorF (JM107 adapted methyl fi... 34 0.17 3
(ED253745) AUAC-aam36f01.g1 Ascaris suum whole genome shotgu... 46 0.17 2
(DH521408) Rattus norvegicus DNA, BAC clone: RNB1-018P05, 5'... 36 0.18 3
(FG988936) GLLCN56TF JCVI-SOY1 Glycine max cDNA 5', mRNA seq... 44 0.18 3
(AM217114) Paracentrotus lividus EST, clone MPMGp1174L0436Q,... 38 0.18 3
(DY888047) CeleSEQ3464 Cunninghamella elegans pBluescript (E... 32 0.18 4
(DY889742) CeleSEQ11932 Cunninghamella elegans pBluescript (... 42 0.18 3
(EL411992) CFFS9606.b1_K01.ab1 CFF(LMS) safflower Carthamus ... 40 0.18 3
(BJ444849) Dictyostelium discoideum cDNA clone:ddv57k13, 3' ... 36 0.18 3
(EY367863) CAXA11480.fwd CAXA Helobdella robusta Subtracted ... 44 0.18 3
(EY353136) CAWZ1928.fwd CAWZ Helobdella robusta Primary Late... 36 0.18 3
(AC105425) Homo sapiens chromosome 7 clone RP11-776N17, WORK... 46 0.18 5
(AP003967) Homo sapiens genomic DNA, chromosome 11 clone:RP1... 40 0.18 7
(AJ620905) Antirrhinum majus mRNA for STYLOSA protein. 50 0.19 2
(AC203153) Zea mays chromosome 5 clone ZMMBBb-31P14; ZMMBBb0... 42 0.19 6
(EY346986) CAWZ15376.fwd CAWZ Helobdella robusta Primary Lat... 40 0.19 2
(AM200734) Paracentrotus lividus EST, clone MPMGp1172A1050Q,... 38 0.20 3
(AM222331) Paracentrotus lividus EST, clone MPMGp1174K0749Q,... 38 0.20 3
(AM223483) Paracentrotus lividus EST, clone MPMGp1174N1151Q,... 38 0.20 3
(AC116985) Dictyostelium discoideum chromosome 2 map 6135249... 42 0.20 5
(CZ541320) SRAA-aad37c12.g1 Strongyloides ratti whole genome... 40 0.20 2
(BJ427091) Dictyostelium discoideum cDNA clone:ddv61b07, 5' ... 32 0.20 4
(CZ530196) SRAA-aac65f01.g1 Strongyloides ratti whole genome... 44 0.20 2
(FE243137) CAPG7501.fwd CAPG Naegleria gruberi amoeba stage ... 38 0.20 3
(AR546117) Sequence 1248 from patent US 6747137. 42 0.20 2
(CZ541126) SRAA-aad36c03.g1 Strongyloides ratti whole genome... 44 0.20 2
(CU019633) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.20 2
(EY306568) CAWX19983.fwd CAWX Helobdella robusta Primary Ear... 46 0.20 2
(CZ290657) cp71c04.f Candida parapsilosis Random Genomic Lib... 48 0.21 2
(CG904452) ZMMBBb0511O04r ZMMBBb (HindIII) Zea mays subsp. m... 38 0.21 2
(EY373893) CAXA14796.rev CAXA Helobdella robusta Subtracted ... 38 0.21 3
(FC811981) Sr_pASP6_09f12_SP6 S. ratti mixed stage pAMP Stro... 44 0.21 2
(AM197464) Paracentrotus lividus EST, clone MPMGp1172C2442Q,... 38 0.21 3
(AC112730) Rattus norvegicus clone CH230-8B11, *** SEQUENCIN... 34 0.21 2
(AC094865) Rattus norvegicus clone CH230-6H1, WORKING DRAFT ... 34 0.21 2
(AL645523) Human DNA sequence *** SEQUENCING CANCELLED *** f... 40 0.21 2
(AC122943) Rattus norvegicus clone CH230-3N3, WORKING DRAFT ... 34 0.21 2
(AC094925) Rattus norvegicus clone CH230-3M19, *** SEQUENCIN... 34 0.21 2
(AC095201) Rattus norvegicus clone CH230-3A7, *** SEQUENCING... 34 0.21 2
(AY022337) Oryza sativa microsatellite MRG4662 containing (A... 38 0.21 2
(GD231805) G1045P3107RG23.T1 Aplysia californica Pooled Norm... 34 0.21 3
(BU935028) AGENCOURT_10516074 NIH_MGC_128 Homo sapiens cDNA ... 40 0.21 3
(CU972391) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.21 2
(FP016192) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.21 2
(AC010114) Drosophila melanogaster 3L BAC RP98-10P9 (Roswell... 34 0.21 2
(EY383497) CAXA464.fwd CAXA Helobdella robusta Subtracted La... 32 0.22 4
(AC135848) Medicago truncatula clone mth2-16g11, WORKING DRA... 46 0.22 9
(DQ452068) Homo sapiens lipoprotein, Lp(a) (LPA) gene, compl... 40 0.22 2
(AL596089) Human DNA sequence from clone RP11-414A5 on chrom... 40 0.22 2
(BZ164233) CH230-246O13.TJB CHORI-230 Segment 2 Rattus norve... 36 0.22 3
(AC014803) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 34 0.22 2
(FF072575) G1045P314RE16.T0 Aplysia californica Pooled Norma... 34 0.22 3
(FB596504) Sequence 12227 from Patent WO2004081186. 40 0.22 2
(AU038064) Dictyostelium discoideum slug cDNA, clone SSH221. 38 0.22 3
(CU463848) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.22 2
(EB921007) 9178782 ZF31 Danio rerio cDNA clone 3255574, mRNA... 38 0.23 2
(CT761211) Paramecium tetraurelia 5-PRIME EST from clone LK0... 42 0.23 2
(AC177472) Strongylocentrotus purpuratus clone R3-61F12, WOR... 44 0.23 8
(EY363431) CAWZ8771.fwd CAWZ Helobdella robusta Primary Late... 44 0.23 3
(EB491953) 1099341406969 12-DrosW-norm-1P5Kb Drosophila will... 46 0.23 2
(EY337737) CAWY8531.fwd CAWY Helobdella robusta Subtracted E... 44 0.23 3
(AC177499) Strongylocentrotus purpuratus clone R3-1027N02, W... 36 0.24 7
(AR546509) Sequence 1640 from patent US 6747137. 36 0.24 4
(AW980688) EST391841 GVN Medicago truncatula cDNA clone pGVN... 38 0.24 4
(DW021038) PMAD-aac06m13.g1 Lamprey_WGS_pCMV-sport6 Petromyz... 38 0.24 3
(AM208784) Paracentrotus lividus EST, clone MPMGp1174D1716Q,... 38 0.24 3
(CQ584300) Sequence 12058 from Patent WO0171042. 34 0.24 2
(CQ584201) Sequence 11959 from Patent WO0171042. 34 0.24 2
(EY371732) CAXA1361.fwd CAXA Helobdella robusta Subtracted L... 36 0.25 3
(BG576120) 602598482F1 NIH_MGC_87 Homo sapiens cDNA clone IM... 46 0.25 2
(AB210631) Ciona intestinalis mRNA for transcription factor ... 30 0.25 5
(AC211251) Zea mays chromosome 4 clone CH201-428P3; ZMMBBc04... 42 0.25 5
(AM212940) Paracentrotus lividus EST, clone MPMGp1174K0826Q,... 38 0.25 3
(AE014297) Drosophila melanogaster chromosome 3R, complete s... 44 0.25 15
(AY022275) Oryza sativa microsatellite MRG4600 containing (A... 38 0.25 2
(CQ584174) Sequence 11932 from Patent WO0171042. 34 0.26 2
(AY159038) Dictyostelium discoideum LvsB (lvsB) gene, comple... 36 0.26 7
(AM208431) Paracentrotus lividus EST, clone MPMGp1174D2015Q,... 38 0.26 3
(CQ584202) Sequence 11960 from Patent WO0171042. 34 0.26 2
(EY497149) CBBP3373.fwd CBBP Hirudo medicinalis hermaphrodit... 30 0.26 5
(CQ584301) Sequence 12059 from Patent WO0171042. 34 0.26 2
(AY052043) Drosophila melanogaster LP05645 full length cDNA. 34 0.26 2
(CQ584175) Sequence 11933 from Patent WO0171042. 34 0.26 2
(FJ636697) Synthetic construct Drosophila melanogaster clone... 34 0.26 2
(FJ632008) Synthetic construct Drosophila melanogaster clone... 34 0.26 2
(AE014833) Plasmodium falciparum 3D7 chromosome 10 section 5... 36 0.27 12
(FE046363) LV_ES_RA06K08f Litopenaeus vannamei eyestalk cDNA... 32 0.27 4
(AC122105) Rattus norvegicus clone CH230-441O19, WORKING DRA... 40 0.27 7
(EH086017) PMEB517TR Perkinsus marinus large insert cDNA lib... 42 0.27 3
(AX344572) Sequence 23 from Patent WO0200932. 34 0.27 17
(AW568843) si73a01.y1 Gm-c1031 Glycine max cDNA clone GENOME... 34 0.28 3
(BF494432) AT03031.5prime AT Drosophila melanogaster adult t... 34 0.28 2
(CR884666) Sus scrofa BES. 40 0.28 2
(AJ238883) Dictyostelium discoideum mRNA for guanylyl cyclase. 44 0.28 2
(AC192481) Pan troglodytes BAC clone CH251-388B14 from chrom... 46 0.28 5
(BF486465) AT20770.5prime AT Drosophila melanogaster adult t... 34 0.28 2
(BF504445) AT05808.5prime AT Drosophila melanogaster adult t... 34 0.28 2
(BF492476) AT01007.5prime AT Drosophila melanogaster adult t... 34 0.28 2
(BF497149) AT11251.5prime AT Drosophila melanogaster adult t... 34 0.28 2
(AI388290) GH19132.5prime GH Drosophila melanogaster head pO... 34 0.28 2
(BF505855) AT08086.5prime AT Drosophila melanogaster adult t... 34 0.28 2
(BF505485) AT07721.5prime AT Drosophila melanogaster adult t... 34 0.28 2
(FI409315) CH322-136A16.y CHORI-322 Drosophila melanogaster ... 34 0.28 2
(BF498707) AT13163.5prime AT Drosophila melanogaster adult t... 34 0.28 2
(BF498181) AT12555.5prime AT Drosophila melanogaster adult t... 34 0.28 2
(BF498984) AT13477.5prime AT Drosophila melanogaster adult t... 34 0.28 2
(AI389638) GH20862.5prime GH Drosophila melanogaster head pO... 34 0.28 2
(BF491707) AT28512.5prime AT Drosophila melanogaster adult t... 34 0.28 2
(AA951802) LD32525.5prime LD Drosophila melanogaster embryo ... 34 0.28 2

>(AC116979) Dictyostelium discoideum chromosome 2 map 6445720-6776760
strain AX4, complete sequence.
Length = 331039

Score = 1407 bits (710), Expect = 0.0
Identities = 710/710 (100%)
Strand = Plus / Plus


Query: 141 agtctgaatcattatttgaagatgaggatgatattttcggtgataaaccagtcgcaagta 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239790 agtctgaatcattatttgaagatgaggatgatattttcggtgataaaccagtcgcaagta 239849


Query: 201 aaaaatcatcaaattcatacacttcttcattatcagatattttaggtggtgatgatgaag 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239850 aaaaatcatcaaattcatacacttcttcattatcagatattttaggtggtgatgatgaag 239909


Query: 261 atgatttattcggtggtagtaaaaagaaacaacaacaacaagaagatgcagatggtgatg 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239910 atgatttattcggtggtagtaaaaagaaacaacaacaacaagaagatgcagatggtgatg 239969


Query: 321 aaccaactaaaaagaaagatccattcgctgatgaacttaataatacattatcttcaaaga 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239970 aaccaactaaaaagaaagatccattcgctgatgaacttaataatacattatcttcaaaga 240029


Query: 381 ataaaggaggtgacgatgatttattcggtggtagtagttcaactacaaccacttcaaaac 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240030 ataaaggaggtgacgatgatttattcggtggtagtagttcaactacaaccacttcaaaac 240089


Query: 441 caaagaagaaatcaatgtttgatgatgatttattcggtgattctgaagaaacacctgcac 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240090 caaagaagaaatcaatgtttgatgatgatttattcggtgattctgaagaaacacctgcac 240149


Query: 501 caaaaagtagtgctagtagaaaagttacatttgatgattcattatttggtgatgatgaaa 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240150 caaaaagtagtgctagtagaaaagttacatttgatgattcattatttggtgatgatgaaa 240209


Query: 561 cagctttaccaacctctaaaaaagattcaactactacctcttcacaaccacaacaaaaga 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240210 cagctttaccaacctctaaaaaagattcaactactacctcttcacaaccacaacaaaaga 240269


Query: 621 aaacattaaatgatttattcactgatgaagatctaacaccagcaaccaaaaaagaaacaa 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240270 aaacattaaatgatttattcactgatgaagatctaacaccagcaaccaaaaaagaaacaa 240329


Query: 681 agaaatcatcatcacttagctttttggatggtatggatgaagatgatctatttggtactc 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240330 agaaatcatcatcacttagctttttggatggtatggatgaagatgatctatttggtactc 240389


Query: 741 caaaaccaaaatcaactacaacatcagcagcaccaacagcaactactaccaaaccaccaa 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240390 caaaaccaaaatcaactacaacatcagcagcaccaacagcaactactaccaaaccaccaa 240449


Query: 801 ctccaatacctgattcagatgcatcaggtagtgagtcaacaactggtaaa 850
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240450 ctccaatacctgattcagatgcatcaggtagtgagtcaacaactggtaaa 240499

Score = 1176 bits (593), Expect = 0.0
Identities = 593/593 (100%)
Strand = Plus / Plus


Query: 1615 tgatagtagtacaaataatgataatgattcatctgcaactgatttatcagattctggtag 1674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242278 tgatagtagtacaaataatgataatgattcatctgcaactgatttatcagattctggtag 242337


Query: 1675 atcatcaccatctgtcacttctccaaccctatctggtggtagaccacgtagaaatacagt 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242338 atcatcaccatctgtcacttctccaaccctatctggtggtagaccacgtagaaatacagt 242397


Query: 1735 ttcgtctcgtaataataatgactctgaagaaagtgaaccagttaaagaattgactcatgc 1794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242398 ttcgtctcgtaataataatgactctgaagaaagtgaaccagttaaagaattgactcatgc 242457


Query: 1795 aactgcaagtagaccaaaatctggtggtcgtagacctccaactcgtaaatctggtacttc 1854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242458 aactgcaagtagaccaaaatctggtggtcgtagacctccaactcgtaaatctggtacttc 242517


Query: 1855 tgctccaaatagatcagaatctccaactccaactcaaaaatccgattcagaatctgaaaa 1914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242518 tgctccaaatagatcagaatctccaactccaactcaaaaatccgattcagaatctgaaaa 242577


Query: 1915 agtcagatcctcttcaccaattacaaccaaaccagttgtttctgaaccaacaaagaagac 1974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242578 agtcagatcctcttcaccaattacaaccaaaccagttgtttctgaaccaacaaagaagac 242637


Query: 1975 tatttcaaatacatcattctttgatgatattccatcagaaaaaacttctagtggtaaatc 2034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242638 tatttcaaatacatcattctttgatgatattccatcagaaaaaacttctagtggtaaatc 242697


Query: 2035 ttcaccatctccaactattaaatcaacatcagaaaaagttacaattgacccattaggtga 2094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242698 ttcaccatctccaactattaaatcaacatcagaaaaagttacaattgacccattaggtga 242757


Query: 2095 tatctttgcatctactactactaaaccaactgcttctgaaaccaaagctgctctttcctc 2154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242758 tatctttgcatctactactactaaaccaactgcttctgaaaccaaagctgctctttcctc 242817


Query: 2155 tgctcctaaaaaatctgaaccagaaacaccaaaagaaacaccaaaagaaacac 2207
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242818 tgctcctaaaaaatctgaaccagaaacaccaaaagaaacaccaaaagaaacac 242870

Score = 688 bits (347), Expect(10) = 0.0
Identities = 347/347 (100%)
Strand = Plus / Plus


Query: 1079 tcaagtaaagacttttttggtgatttggatactagtagcggtaataaaaaagttgaagaa 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241742 tcaagtaaagacttttttggtgatttggatactagtagcggtaataaaaaagttgaagaa 241801


Query: 1139 aagaaatcatcagattttgatagtttcttctctggtagtgatgatccattaggaattaca 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241802 aagaaatcatcagattttgatagtttcttctctggtagtgatgatccattaggaattaca 241861


Query: 1199 aaaccaaaatcaaagacaactactacaccaccacttacatctacaacagcaaatattgaa 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241862 aaaccaaaatcaaagacaactactacaccaccacttacatctacaacagcaaatattgaa 241921


Query: 1259 tctgatgatccactttcattaggtttaccaacattcacaaataacaacaataataataat 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241922 tctgatgatccactttcattaggtttaccaacattcacaaataacaacaataataataat 241981


Query: 1319 gcaaaaccacctccaccaccatcaccattaggagaggatgtaccatcaccattaacaagt 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241982 gcaaaaccacctccaccaccatcaccattaggagaggatgtaccatcaccattaacaagt 242041


Query: 1379 aataatacaaagaatagaactaaatcaattggatcaatgtttgaagc 1425
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242042 aataatacaaagaatagaactaaatcaattggatcaatgtttgaagc 242088

Score = 281 bits (142), Expect(10) = 0.0
Identities = 142/142 (100%)
Strand = Plus / Plus


Query: 1 aagtgaaagtagtagtgatgatgatgatgaaaaagatgaacaacaacaatcaacattgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239552 aagtgaaagtagtagtgatgatgatgatgaaaaagatgaacaacaacaatcaacattgtt 239611


Query: 61 cctcactgatgaacaaccaaaacaacaaaactttttcttccaagatgaagatgctacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239612 cctcactgatgaacaaccaaaacaacaaaactttttcttccaagatgaagatgctacatc 239671


Query: 121 tgaaaataatgcaaataagaag 142
||||||||||||||||||||||
Sbjct: 239672 tgaaaataatgcaaataagaag 239693

Score = 278 bits (140), Expect(10) = 0.0
Identities = 140/140 (100%)
Strand = Plus / Plus


Query: 898 tccaacaacatcatcatcaacaactgctactgaaaataaaccagcagttaaaaaatcaac 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241561 tccaacaacatcatcatcaacaactgctactgaaaataaaccagcagttaaaaaatcaac 241620


Query: 958 taaatcaaactttttcgattttgaagacacagattcaccattatcatcaaataaaaagaa 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241621 taaatcaaactttttcgattttgaagacacagattcaccattatcatcaaataaaaagaa 241680


Query: 1018 tgatgatgatattttctcat 1037
||||||||||||||||||||
Sbjct: 241681 tgatgatgatattttctcat 241700

Score = 238 bits (120), Expect(10) = 0.0
Identities = 120/120 (100%)
Strand = Plus / Plus


Query: 1454 gaaaagaatagatcagaatcaccaacatcagaaaaagctgaaccaacaaagaaaacatca 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242117 gaaaagaatagatcagaatcaccaacatcagaaaaagctgaaccaacaaagaaaacatca 242176


Query: 1514 aatatttcgtcacttcaaaataaattatcattaaatccaaatatgtttttaccaggatct 1573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242177 aatatttcgtcacttcaaaataaattatcattaaatccaaatatgtttttaccaggatct 242236

Score = 58.0 bits (29), Expect(10) = 0.0
Identities = 29/29 (100%)
Strand = Plus / Plus


Query: 861 aagaatcagtatttggtgatttctcaatt 889
|||||||||||||||||||||||||||||
Sbjct: 241524 aagaatcagtatttggtgatttctcaatt 241552

Score = 44.1 bits (22), Expect(10) = 0.0
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 260 gatgatttattcggtggtagta 281
||||||||||||||||||||||
Sbjct: 240044 gatgatttattcggtggtagta 240065

Score = 34.2 bits (17), Expect(10) = 0.0
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 2176 agaaacaccaaaagaaa 2192
|||||||||||||||||
Sbjct: 242863 agaaacaccaaaagaaa 242879

Score = 32.2 bits (16), Expect(10) = 0.0
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 395 gatgatttattcggtg 410
||||||||||||||||
Sbjct: 240113 gatgatttattcggtg 240128

Score = 30.2 bits (15), Expect(10) = 0.0
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 460 tgatgatgatttatt 474
|||||||||||||||
Sbjct: 241099 tgatgatgatttatt 241113

Score = 30.2 bits (15), Expect(10) = 0.0
Identities = 21/23 (91%)
Strand = Plus / Plus


Query: 2185 aaaagaaacaccaaaagaaacac 2207
||||||| ||||||||||||||
Sbjct: 242896 aaaagaacaaccaaaagaaacac 242918

Score = 155 bits (78), Expect(11) = 1e-48
Identities = 81/82 (98%)
Strand = Plus / Plus


Query: 935 aaaccagcagttaaaaaatcaactaaatcaaactttttcgattttgaagacacagattca 994
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 241010 aaaccagcagttaaaaaatcaactaaatcaaactttttcgattttgaagatacagattca 241069


Query: 995 ccattatcatcaaataaaaaga 1016
||||||||||||||||||||||
Sbjct: 241070 ccattatcatcaaataaaaaga 241091

Score = 58.0 bits (29), Expect(11) = 1e-48
Identities = 29/29 (100%)
Strand = Plus / Plus


Query: 2176 agaaacaccaaaagaaacaccaaaagaaa 2204
|||||||||||||||||||||||||||||
Sbjct: 242851 agaaacaccaaaagaaacaccaaaagaaa 242879

Score = 44.1 bits (22), Expect(11) = 1e-48
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 395 gatgatttattcggtggtagta 416
||||||||||||||||||||||
Sbjct: 239909 gatgatttattcggtggtagta 239930

Score = 34.2 bits (17), Expect(11) = 1e-48
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 1487 aaagctgaaccaacaaa 1503
|||||||||||||||||
Sbjct: 241430 aaagctgaaccaacaaa 241446

Score = 32.2 bits (16), Expect(11) = 1e-48
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 239 attttaggtggtgatgatga 258
||||||| ||||||||||||
Sbjct: 48770 attttagatggtgatgatga 48789

Score = 32.2 bits (16), Expect(11) = 1e-48
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 281 aaaaagaaacaacaacaaca 300
|||||| |||||||||||||
Sbjct: 235095 aaaaagcaacaacaacaaca 235114

Score = 32.2 bits (16), Expect(11) = 1e-48
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 464 gatgatttattcggtg 479
||||||||||||||||
Sbjct: 240044 gatgatttattcggtg 240059

Score = 32.2 bits (16), Expect(11) = 1e-48
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 1862 aatagatcagaatctccaac 1881
|||||||||||||| |||||
Sbjct: 242123 aatagatcagaatcaccaac 242142

Score = 32.2 bits (16), Expect(11) = 1e-48
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 1956 ctgaaccaacaaagaa 1971
||||||||||||||||
Sbjct: 242154 ctgaaccaacaaagaa 242169

Score = 30.2 bits (15), Expect(11) = 1e-48
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 16 tgatgatgatgatga 30
|||||||||||||||
Sbjct: 37457 tgatgatgatgatga 37471

Score = 30.2 bits (15), Expect(11) = 1e-48
Identities = 24/27 (88%)
Strand = Plus / Plus


Query: 263 gatttattcggtggtagtaaaaagaaa 289
|||||||| ||||||||||| |||||
Sbjct: 226494 gatttattgagtggtagtaaagagaaa 226520

Score = 36.2 bits (18), Expect(12) = 3e-05
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 900 caacaacatcatcatcaacaac 921
|||||||| |||||||||||||
Sbjct: 111901 caacaacaacatcatcaacaac 111922

Score = 36.2 bits (18), Expect(12) = 3e-05
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 1301 aacaacaataataataat 1318
||||||||||||||||||
Sbjct: 261824 aacaacaataataataat 261841

Score = 34.2 bits (17), Expect(12) = 3e-05
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 997 attatcatcaaataaaa 1013
|||||||||||||||||
Sbjct: 150608 attatcatcaaataaaa 150624

Score = 30.2 bits (15), Expect(12) = 3e-05
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 16 tgatgatgatgatga 30
|||||||||||||||
Sbjct: 37460 tgatgatgatgatga 37474

Score = 30.2 bits (15), Expect(12) = 3e-05
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 272 ggtggtagtaaaaagaaac 290
|||||| ||||||||||||
Sbjct: 42483 ggtggtggtaaaaagaaac 42501

Score = 30.2 bits (15), Expect(12) = 3e-05
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 287 aaacaacaacaacaa 301
|||||||||||||||
Sbjct: 57339 aaacaacaacaacaa 57353

Score = 30.2 bits (15), Expect(12) = 3e-05
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1017 atgatgatgatattt 1031
|||||||||||||||
Sbjct: 229780 atgatgatgatattt 229794

Score = 30.2 bits (15), Expect(12) = 3e-05
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1197 caaaaccaaaatcaa 1211
|||||||||||||||
Sbjct: 240390 caaaaccaaaatcaa 240404

Score = 30.2 bits (15), Expect(12) = 3e-05
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1323 aaccacctccaccac 1337
|||||||||||||||
Sbjct: 271258 aaccacctccaccac 271272

Score = 30.2 bits (15), Expect(12) = 3e-05
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1618 tagtagtacaaataa 1632
|||||||||||||||
Sbjct: 274052 tagtagtacaaataa 274066

Score = 30.2 bits (15), Expect(12) = 3e-05
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 1627 aaataatgataatgattca 1645
|||||||||||| ||||||
Sbjct: 288108 aaataatgataaagattca 288126

Score = 28.2 bits (14), Expect(12) = 3e-05
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 484 tgaagaaacacctg 497
||||||||||||||
Sbjct: 87773 tgaagaaacacctg 87786

Score = 40.1 bits (20), Expect(13) = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 2188 agaaacaccaaaagaaacac 2207
||||||||||||||||||||
Sbjct: 242839 agaaacaccaaaagaaacac 242858

Score = 34.2 bits (17), Expect(13) = 4e-04
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 1298 aataacaacaataataataat 1318
||||| |||||||||||||||
Sbjct: 33393 aataataacaataataataat 33413

Score = 30.2 bits (15), Expect(13) = 4e-04
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 245 ggtggtgatgatgaa 259
|||||||||||||||
Sbjct: 23706 ggtggtgatgatgaa 23720

Score = 30.2 bits (15), Expect(13) = 4e-04
Identities = 21/23 (91%)
Strand = Plus / Plus


Query: 900 caacaacatcatcatcaacaact 922
||||||||||| || ||||||||
Sbjct: 26790 caacaacatcaacaacaacaact 26812

Score = 30.2 bits (15), Expect(13) = 4e-04
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1003 atcaaataaaaagaa 1017
|||||||||||||||
Sbjct: 30418 atcaaataaaaagaa 30432

Score = 30.2 bits (15), Expect(13) = 4e-04
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1628 aataatgataatgat 1642
|||||||||||||||
Sbjct: 57475 aataatgataatgat 57489

Score = 30.2 bits (15), Expect(13) = 4e-04
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 2043 ctccaactattaaat 2057
|||||||||||||||
Sbjct: 174390 ctccaactattaaat 174404

Score = 30.2 bits (15), Expect(13) = 4e-04
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 2058 caacatcagaaaaag 2072
|||||||||||||||
Sbjct: 242139 caacatcagaaaaag 242153

Score = 28.2 bits (14), Expect(13) = 4e-04
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 288 aacaacaacaacaa 301
||||||||||||||
Sbjct: 26746 aacaacaacaacaa 26759

Score = 28.2 bits (14), Expect(13) = 4e-04
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 1093 ttttggtgatttgg 1106
||||||||||||||
Sbjct: 32205 ttttggtgatttgg 32218

Score = 28.2 bits (14), Expect(13) = 4e-04
Identities = 17/18 (94%)
Strand = Plus / Plus


Query: 1378 taataatacaaagaatag 1395
|||||||||||| |||||
Sbjct: 36645 taataatacaaataatag 36662

Score = 28.2 bits (14), Expect(13) = 4e-04
Identities = 17/18 (94%)
Strand = Plus / Plus


Query: 1532 aataaattatcattaaat 1549
||||||||||||| ||||
Sbjct: 49013 aataaattatcatcaaat 49030

Score = 28.2 bits (14), Expect(13) = 4e-04
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 1922 tcctcttcaccaat 1935
||||||||||||||
Sbjct: 94219 tcctcttcaccaat 94232

Score = 38.2 bits (19), Expect(10) = 0.003
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 1298 aataacaacaataataata 1316
|||||||||||||||||||
Sbjct: 148089 aataacaacaataataata 148107

Score = 38.2 bits (19), Expect(10) = 0.003
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 2182 accaaaagaaacaccaaaa 2200
|||||||||||||||||||
Sbjct: 242905 accaaaagaaacaccaaaa 242923

Score = 32.2 bits (16), Expect(10) = 0.003
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 282 aaaagaaacaacaacaacaa 301
|||||||||||| |||||||
Sbjct: 37879 aaaagaaacaaccacaacaa 37898

Score = 32.2 bits (16), Expect(10) = 0.003
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 1460 aatagatcagaatcaccaac 1479
|||||||||||||| |||||
Sbjct: 242525 aatagatcagaatctccaac 242544

Score = 32.2 bits (16), Expect(10) = 0.003
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 1491 ctgaaccaacaaagaa 1506
||||||||||||||||
Sbjct: 242619 ctgaaccaacaaagaa 242634

Score = 30.2 bits (15), Expect(10) = 0.003
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 16 tgatgatgatgatga 30
|||||||||||||||
Sbjct: 37463 tgatgatgatgatga 37477

Score = 28.2 bits (14), Expect(10) = 0.003
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 514 tagtagaaaagtta 527
||||||||||||||
Sbjct: 45232 tagtagaaaagtta 45245

Score = 28.2 bits (14), Expect(10) = 0.003
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 668 aaaaaagaaacaaa 681
||||||||||||||
Sbjct: 65045 aaaaaagaaacaaa 65058

Score = 28.2 bits (14), Expect(10) = 0.003
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 906 catcatcatcaaca 919
||||||||||||||
Sbjct: 81152 catcatcatcaaca 81165

Score = 28.2 bits (14), Expect(10) = 0.003
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 1177 tgatgatccattag 1190
||||||||||||||
Sbjct: 81342 tgatgatccattag 81355

Score = 34.2 bits (17), Expect(11) = 0.007
Identities = 20/21 (95%)
Strand = Plus / Minus


Query: 281 aaaaagaaacaacaacaacaa 301
||||| |||||||||||||||
Sbjct: 186232 aaaaacaaacaacaacaacaa 186212

Score = 34.2 bits (17), Expect(11) = 0.007
Identities = 17/17 (100%)
Strand = Plus / Minus


Query: 17 gatgatgatgatgaaaa 33
|||||||||||||||||
Sbjct: 248942 gatgatgatgatgaaaa 248926

Score = 32.2 bits (16), Expect(11) = 0.007
Identities = 19/20 (95%)
Strand = Plus / Minus


Query: 1628 aataatgataatgattcatc 1647
|||||| |||||||||||||
Sbjct: 48828 aataataataatgattcatc 48809

Score = 32.2 bits (16), Expect(11) = 0.007
Identities = 19/20 (95%)
Strand = Plus / Minus


Query: 898 tccaacaacatcatcatcaa 917
||||||||||||| ||||||
Sbjct: 129008 tccaacaacatcaacatcaa 128989

Score = 32.2 bits (16), Expect(11) = 0.007
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 678 caaagaaatcatcatc 693
||||||||||||||||
Sbjct: 159055 caaagaaatcatcatc 159040

Score = 32.2 bits (16), Expect(11) = 0.007
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 665 accaaaaaagaaacaa 680
||||||||||||||||
Sbjct: 184956 accaaaaaagaaacaa 184941

Score = 30.2 bits (15), Expect(11) = 0.007
Identities = 18/19 (94%)
Strand = Plus / Minus


Query: 247 tggtgatgatgaagatgat 265
|||||||||||| ||||||
Sbjct: 201915 tggtgatgatgatgatgat 201897

Score = 28.2 bits (14), Expect(11) = 0.007
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 1494 aaccaacaaagaaa 1507
||||||||||||||
Sbjct: 66892 aaccaacaaagaaa 66879

Score = 28.2 bits (14), Expect(11) = 0.007
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 1375 aagtaataatacaa 1388
||||||||||||||
Sbjct: 78904 aagtaataatacaa 78891

Score = 28.2 bits (14), Expect(11) = 0.007
Identities = 23/26 (88%)
Strand = Plus / Minus


Query: 1298 aataacaacaataataataatgcaaa 1323
||||| || |||||||||||| ||||
Sbjct: 83098 aataataataataataataatccaaa 83073

Score = 28.2 bits (14), Expect(11) = 0.007
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 1180 tgatccattaggaa 1193
||||||||||||||
Sbjct: 88652 tgatccattaggaa 88639

Score = 36.2 bits (18), Expect(7) = 0.015
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 1301 aacaacaataataataat 1318
||||||||||||||||||
Sbjct: 299078 aacaacaataataataat 299095

Score = 36.2 bits (18), Expect(7) = 0.015
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 1324 accacctccaccaccatcacca 1345
|||||||||||||||| |||||
Sbjct: 327106 accacctccaccaccaccacca 327127

Score = 34.2 bits (17), Expect(7) = 0.015
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 288 aacaacaacaacaagaa 304
|||||||||||||||||
Sbjct: 242103 aacaacaacaacaagaa 242119

Score = 32.2 bits (16), Expect(7) = 0.015
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 16 tgatgatgatgatgaa 31
||||||||||||||||
Sbjct: 60714 tgatgatgatgatgaa 60729

Score = 32.2 bits (16), Expect(7) = 0.015
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 162 atgaggatgatatttt 177
||||||||||||||||
Sbjct: 234589 atgaggatgatatttt 234604

Score = 32.2 bits (16), Expect(7) = 0.015
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 260 gatgatttattcggtg 275
||||||||||||||||
Sbjct: 240113 gatgatttattcggtg 240128

Score = 30.2 bits (15), Expect(7) = 0.015
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 677 acaaagaaatcatca 691
|||||||||||||||
Sbjct: 291187 acaaagaaatcatca 291201

Score = 36.2 bits (18), Expect(8) = 1.6
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 900 caacaacatcatcatcaacaac 921
|||||||| |||||||||||||
Sbjct: 111940 caacaacaacatcatcaacaac 111961

Score = 34.2 bits (17), Expect(8) = 1.6
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 1298 aataacaacaataataataat 1318
|||||||| ||||||||||||
Sbjct: 140975 aataacaataataataataat 140995

Score = 34.2 bits (17), Expect(8) = 1.6
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 1988 tcattctttgatgatat 2004
|||||||||||||||||
Sbjct: 242978 tcattctttgatgatat 242994

Score = 30.2 bits (15), Expect(8) = 1.6
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 16 tgatgatgatgatga 30
|||||||||||||||
Sbjct: 37466 tgatgatgatgatga 37480

Score = 30.2 bits (15), Expect(8) = 1.6
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 604 acaaccacaacaaaa 618
|||||||||||||||
Sbjct: 37886 acaaccacaacaaaa 37900

Score = 30.2 bits (15), Expect(8) = 1.6
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1476 caacatcagaaaaag 1490
|||||||||||||||
Sbjct: 242721 caacatcagaaaaag 242735

Score = 28.2 bits (14), Expect(8) = 1.6
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 288 aacaacaacaacaa 301
||||||||||||||
Sbjct: 37846 aacaacaacaacaa 37859

Score = 28.2 bits (14), Expect(8) = 1.6
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 664 aaccaaaaaagaaa 677
||||||||||||||
Sbjct: 43789 aaccaaaaaagaaa 43802

Score = 40.1 bits (20), Expect(9) = 1.7
Identities = 20/20 (100%)
Strand = Plus / Minus


Query: 1298 aataacaacaataataataa 1317
||||||||||||||||||||
Sbjct: 15318 aataacaacaataataataa 15299

Score = 32.2 bits (16), Expect(9) = 1.7
Identities = 22/24 (91%)
Strand = Plus / Minus


Query: 108 aagatgctacatctgaaaataatg 131
|||||| | |||||||||||||||
Sbjct: 158977 aagatgattcatctgaaaataatg 158954

Score = 32.2 bits (16), Expect(9) = 1.7
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 15 gtgatgatgatgatga 30
||||||||||||||||
Sbjct: 201913 gtgatgatgatgatga 201898

Score = 30.2 bits (15), Expect(9) = 1.7
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 1017 atgatgatgatattt 1031
|||||||||||||||
Sbjct: 18734 atgatgatgatattt 18720

Score = 30.2 bits (15), Expect(9) = 1.7
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 287 aaacaacaacaacaa 301
|||||||||||||||
Sbjct: 84850 aaacaacaacaacaa 84836

Score = 28.2 bits (14), Expect(9) = 1.7
Identities = 20/22 (90%)
Strand = Plus / Minus


Query: 900 caacaacatcatcatcaacaac 921
||||||||||| || |||||||
Sbjct: 28269 caacaacatcaacaacaacaac 28248

Score = 28.2 bits (14), Expect(9) = 1.7
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 664 aaccaaaaaagaaa 677
||||||||||||||
Sbjct: 49510 aaccaaaaaagaaa 49497

Score = 28.2 bits (14), Expect(9) = 1.7
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 529 atttgatgattcat 542
||||||||||||||
Sbjct: 55973 atttgatgattcat 55960

Score = 28.2 bits (14), Expect(9) = 1.7
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 251 gatgatgaagatga 264
||||||||||||||
Sbjct: 94190 gatgatgaagatga 94177

Score = 36.2 bits (18), Expect(6) = 2.0
Identities = 18/18 (100%)
Strand = Plus / Minus


Query: 1744 taataataatgactctga 1761
||||||||||||||||||
Sbjct: 288912 taataataatgactctga 288895

Score = 34.2 bits (17), Expect(6) = 2.0
Identities = 17/17 (100%)
Strand = Plus / Minus


Query: 1624 tacaaataatgataatg 1640
|||||||||||||||||
Sbjct: 289203 tacaaataatgataatg 289187

Score = 34.2 bits (17), Expect(6) = 2.0
Identities = 20/21 (95%)
Strand = Plus / Minus


Query: 1297 aaataacaacaataataataa 1317
|||||| ||||||||||||||
Sbjct: 294301 aaataataacaataataataa 294281

Score = 32.2 bits (16), Expect(6) = 2.0
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 997 attatcatcaaataaa 1012
||||||||||||||||
Sbjct: 305284 attatcatcaaataaa 305269

Score = 30.2 bits (15), Expect(6) = 2.0
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 1977 tttcaaatacatcat 1991
|||||||||||||||
Sbjct: 256209 tttcaaatacatcat 256195

Score = 30.2 bits (15), Expect(6) = 2.0
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 287 aaacaacaacaacaa 301
|||||||||||||||
Sbjct: 325589 aaacaacaacaacaa 325575

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 3,105,098,644
Number of extensions: 218413785
Number of successful extensions: 23080719
Number of sequences better than 10.0: 2584
Length of query: 2207
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 2183
Effective length of database: 99,340,224,878
Effective search space: 216859710908674
Effective search space used: 216859710908674
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.28
Homology vs Protein
Query= Contig-U16556-1 (Contig-U16556-1Q) /CSM_Contig/Contig-U16556-1Q.Seq.d
(2207 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC116979_72(AC116979|pid:none) Dictyostelium discoideum chromoso... 496 e-138
BC166366_1(BC166366|pid:none) Xenopus tropicalis SH3-domain kina... 43 0.056
CR382126_1139(CR382126|pid:none) Kluyveromyces lactis strain NRR... 40 0.28
AF329268_1(AF329268|pid:none) Homo sapiens SH3-domain kinase bin... 39 0.62
BC134444_1(BC134444|pid:none) Bos taurus SH3-domain kinase bindi... 39 0.62
(Q8R551) RecName: Full=SH3 domain-containing kinase-binding prot... 39 0.62
AF472327_2(AF472327|pid:none) Mus musculus Ruk protein (Sh3kbp1)... 39 0.62
(Q96B97) RecName: Full=SH3 domain-containing kinase-binding prot... 39 0.62
A68194_1(A68194|pid:none) Sequence 1 from Patent WO9749808. 39 0.62
AL732327_4(AL732327|pid:none) Human DNA sequence from clone RP11... 39 0.62
AF255886_1(AF255886|pid:none) Rattus norvegicus adapter protein ... 39 0.62
AF542051_1(AF542051|pid:none) Homo sapiens CD2 binding protein C... 39 0.62
AK293237_1(AK293237|pid:none) Homo sapiens cDNA FLJ54612 complet... 39 0.62
AF472327_4(AF472327|pid:none) Mus musculus Ruk protein (Sh3kbp1)... 39 0.62
AF230520_1(AF230520|pid:none) Rattus norvegicus SH3 domain-conta... 39 0.62
BC015806_1(BC015806|pid:none) Homo sapiens SH3-domain kinase bin... 39 0.62
AF255888_1(AF255888|pid:none) Rattus norvegicus adapter protein ... 39 0.62
(Q925Q9) RecName: Full=SH3 domain-containing kinase-binding prot... 39 0.62
AF255887_1(AF255887|pid:none) Rattus norvegicus adapter protein ... 39 0.62
AL929452_9(AL929452|pid:none) Mouse DNA sequence from clone RP23... 39 0.62
AJ719327_1(AJ719327|pid:none) Gallus gallus mRNA for hypothetica... 39 0.81
AF010496_63(AF010496|pid:none) Rhodobacter capsulatus strain SB1... 38 1.4
(Q8IYB3) RecName: Full=Serine/arginine repetitive matrix protein... 37 2.3
AJ720324_1(AJ720324|pid:none) Gallus gallus mRNA for hypothetica... 37 2.3
AF048977_1(AF048977|pid:none) Homo sapiens Ser/Arg-related nucle... 37 2.3
AL445648_1(AL445648|pid:none) Human DNA sequence from clone RP11... 37 2.3
AK302498_1(AK302498|pid:none) Homo sapiens cDNA FLJ61739 complet... 37 2.3
BC036187_1(BC036187|pid:none) Homo sapiens serine/arginine repet... 37 2.3
BC166180_1(BC166180|pid:none) Xenopus tropicalis hypothetical pr... 37 4.0
CP000387_2199(CP000387|pid:none) Streptococcus sanguinis SK36, c... 36 5.2
AM486160_4(AM486160|pid:none) Vitis vinifera contig VV78X137753.... 36 5.2
CS300519_1(CS300519|pid:none) Sequence 27 from Patent EP1661986. 35 8.9

>AC116979_72(AC116979|pid:none) Dictyostelium discoideum chromosome 2
map 6445720-6776760 strain AX4, complete sequence.
Length = 1478

Score = 496 bits (1278), Expect = e-138
Identities = 279/429 (65%), Positives = 279/429 (65%)
Frame = +2

Query: 863 ESVFGDFSIKKNPTTSSSTTATENKPAVKKSTKSNFFDFEDTDSPLSSNKKNDDDIFXXX 1042
ESVFGDFSIKKNPTTSSSTTATENKPAVKKSTKSNFFDFEDTDSPLSSNKKNDDDIF
Sbjct: 893 ESVFGDFSIKKNPTTSSSTTATENKPAVKKSTKSNFFDFEDTDSPLSSNKKNDDDIFSST 952

Query: 1043 XXXXXXXXXXXXXXXDFFGDLDTSSGNKKVEEKKXXXXXXXXXXXXXPLGIXXXXXXXXX 1222
DFFGDLDTSSGNKKVEEKK PLGI
Sbjct: 953 TKKSTTTTTTTTSSKDFFGDLDTSSGNKKVEEKKSSDFDSFFSGSDDPLGITKPKSKTTT 1012

Query: 1223 XXXXXXXXANIESDDPLSLGLPTFTXXXXXXXXXXXXXXXXLGEDVPSPLTSNNTKNRTK 1402
ANIESDDPLSLGLPTFT LGEDVPSPLTSNNTKNRTK
Sbjct: 1013 TPPLTSTTANIESDDPLSLGLPTFTNNNNNNNAKPPPPPSPLGEDVPSPLTSNNTKNRTK 1072

Query: 1403 SIGSMFEAXXXXXXXXXEKNRSESPTSEKAEPTKKTSNISSLQNKLSLNPNMFLPGSKMP 1582
SIGSMFEA EKNRSESPTSEKAEPTKKTSNISSLQNKLSLNPNMFLPGSKMP
Sbjct: 1073 SIGSMFEAQQQLQQQQQEKNRSESPTSEKAEPTKKTSNISSLQNKLSLNPNMFLPGSKMP 1132

Query: 1583 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSSPSVTSPTLSGGRPRRNTVXXXXXXXXX 1762
GRSSPSVTSPTLSGGRPRRNTV
Sbjct: 1133 KKKKEESENEDDSSTNNDNDSSATDLSDSGRSSPSVTSPTLSGGRPRRNTVSSRNNNDSE 1192

Query: 1763 XXXPVKELTHATASRPKSGGRRPPTRKSGTSAPNRSESPTPTQXXXXXXXXXXXXXPITT 1942
PVKELTHATASRPKSGGRRPPTRKSGTSAPNRSESPTPTQ PITT
Sbjct: 1193 ESEPVKELTHATASRPKSGGRRPPTRKSGTSAPNRSESPTPTQKSDSESEKVRSSSPITT 1252

Query: 1943 KPVVSEPTKKTISNTSFFDDXXXXXXXXXXXXXXXXXXXXXXXVTIDPLGDIFASTTTKP 2122
KPVVSEPTKKTISNTSFFDD VTIDPLGDIFASTTTKP
Sbjct: 1253 KPVVSEPTKKTISNTSFFDDIPSEKTSSGKSSPSPTIKSTSEKVTIDPLGDIFASTTTKP 1312

Query: 2123 TASETKAAL 2149
TASETKAAL
Sbjct: 1313 TASETKAAL 1321

Score = 321 bits (822), Expect = 8e-86
Identities = 190/341 (55%), Positives = 200/341 (58%), Gaps = 14/341 (4%)
Frame = +2

Query: 53 TLFLTDEQPKQQNFFFQDEDATSENNANKKSESLFEDEDDIFGDKPVAXXXXXXXXXXXX 232
TLFLTDEQPKQQNFFFQDEDATSENNANKKSESLFEDEDDIFGDKPVA
Sbjct: 285 TLFLTDEQPKQQNFFFQDEDATSENNANKKSESLFEDEDDIFGDKPVASKKSSNSYTSSL 344

Query: 233 XXXXXXXXXXXXXXXXKKKQQQQEDADGDEPTKKKDPFADELNNTLSSKNKGGDDDLFGG 412
KKKQQQQEDADGDEPTKKKDPFADELNNTLSSKNKGGDDDLFGG
Sbjct: 345 SDILGGDDEDDLFGGSKKKQQQQEDADGDEPTKKKDPFADELNNTLSSKNKGGDDDLFGG 404

Query: 413 XXXXXXXXXXXXXXMFDDDLFGDSEETPAPKSSASRKVTFDDSLFGDDETALXXXXXXXX 592
MFDDDLFGDSEETPAPKSSASRKVTFDDSLFGDDETAL
Sbjct: 405 SSSTTTTSKPKKKSMFDDDLFGDSEETPAPKSSASRKVTFDDSLFGDDETALPTSKKDST 464

Query: 593 XXXXXXXXXXXLNDLFTDEDLTPAXXXXXXXXXXXXFLDGMDEDDLFGXXXXXXXXXXXX 772
LNDLFTDEDLTPA FLDGMDEDDLFG
Sbjct: 465 TTSSQPQQKKTLNDLFTDEDLTPATKKETKKSSSLSFLDGMDEDDLFGTPKPKSTTTSAA 524

Query: 773 XXXXXXXXXXXIPDSDASGSESTTG-------------KXXXXESVFGD-FSIKKNPTTS 910
IPDSDASGSESTTG K ++ GD FS KK T
Sbjct: 525 PTATTTKPPTPIPDSDASGSESTTGKSSPAPKKPVGGVKLFDFDAAGGDIFSGKKVGTGG 584

Query: 911 SSTTATENKPAVKKSTKSNFFDFEDTDSPLSSNKKNDDDIF 1033
S+ + PA K +K++ DF +D +S K D +IF
Sbjct: 585 KSSPS----PAPKTESKASEDDFFSSDKKSTSATKKDAEIF 621

Score = 77.4 bits (189), Expect = 2e-12
Identities = 44/78 (56%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +2

Query: 806 IPDSDASGSESTTGKXXXXESVFGDFSIKKNPTTSSSTTATENKPAVKKSTKSNFFDFED 985
IP +++ + T K + D I K PTT+++TT T KPAVKKSTKSNFFDFED
Sbjct: 682 IPKANSKKEQET--KPTKSTTTDDDLDIPKAPTTATTTTTT--KPAVKKSTKSNFFDFED 737

Query: 986 TDSPLSSNKKN--DDDIF 1033
TDSPLSSNKK+ DDD+F
Sbjct: 738 TDSPLSSNKKSGGDDDLF 755

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 2,273,875,617
Number of extensions: 33122583
Number of successful extensions: 82942
Number of sequences better than 10.0: 32
Number of HSP's gapped: 82645
Number of HSP's successfully gapped: 34
Length of query: 735
Length of database: 1,061,185,681
Length adjustment: 136
Effective length of query: 599
Effective length of database: 616,676,753
Effective search space: 369389375047
Effective search space used: 369389375047
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.28 alm: 0.57 top: 0.53 tms: 0.00 mit: 0.27 mip: 0.00
nuc: 0.34 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

72.0 %: nuclear
24.0 %: cytoplasmic
4.0 %: vesicles of secretory system

>> prediction for Contig-U16556-1 is nuc

VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 1
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0