Contig-U16527-1
Contig ID Contig-U16527-1
Contig update 2004. 6.11
Contig sequence
>Contig-U16527-1 (Contig-U16527-1Q) /CSM_Contig/Contig-U16527-1Q.Seq.d
AAGAAGAGTGAGCAAGCAGATGCAAGTGAAAGAAGCCAGTAGGCGACTGA
CAGCATGCAAGCTGCAGCAGTGATACGCTAGTATCAGTGTGCTCATGTGG
TCCTGCTGCCTAGCAGCGGTGCCGCCTCGTCTTCTGGACATTTTTTGGCA
GACAAACGGGTATCGGAATCAGTTGAGCCTAACCCCATGGATTAGCCCGT
GGAAACTCTCAACAGCGATTCACCCAATCATGTGCACTGCGACTGGCAAC
AGCAGTAGTGTACCGGAGCGAGTGGCCCATATAACGAGGTTCCTTCACTG
GATCGGTAGTTGCTGGGTGGCGAGCTCCAAACCGCCACAGCCATTTGCTT
TATTGCGAGCAATGGCACGAGTCACCGGATGTAGCAAGCGCGTAAAAAAC
CTGTGCTACAAATTAATCGTGGAGCGTGCGCCGTCCTTTTCTAGGTATGC
ATGCGCTCTCACACCCCAGGCGGCGACAGCAATGTCGGCTTTCTAGACGT
GTCAAAGCGACTAGGCCAATGCAATAGGTGACGGAGGAGCAATAAGGAGA
TCTGTTGGCAAAGTGCTGATTTACTTTGTGGAGCATGGTTAAAGGCCAGA
TTTAACTATCTGTCAGCTAACAATGTAACATTTGATGAATCTTTTTAATT
GGTAATAAAAGTGACGGGATCTAATCCTGTAATTTTGTGACCTCTTCAAA
GGGAAACATTAACCAAACAATCAAAACAAAAAATAAGTTTTGTAATTAAT
ATGTAATAGTGATTAATATCATGATACGTGTTATCTACATGCTTAACTGG
TTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATG
TCTAAGTATAAATTCTTGTACGATGAAACTGCAGACGGCTCATTACAACA
GTGATAAACTAATAGACTTTCGGGTTTTACCTTTTGGATAACCGCAGTAA
ATCGGGGCTAATACATACAAGCGATGGGTGACTGGCAACGGAAGCTCAGC
GATTATTAGCATTCTACCAATGCCTTCGGGTTTTGGGTGATACCGAATAA
TATTGCAGATCGAGGATTTATCTTCGACAAGTCTACTGTGTCACTGCCCT
ATCAACTTTCGATGGTACGGTATTGGCCTACCATGGTTGTAACGGGTAAC
GGGGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAATGGCTACCAC
TTCTACGGAAGGCAGCAGGCGCGCAAATTACTCAATCCCAATACGGGGAA
GTAGTGACAATAAATATCAATACCTATCCTTTTTGGAGGGCAATTGAAAT
GAACACAAATTAAAACTCTTAATTAACACAATTGGAGGGCAAGTCTGGTG
CCAGCAGCCCGCGGTAATTCCAGCTCCAATAGCATATACTAAAGTTGTTG
CAGTTAAAAAGCTCGTAGTTGAAGTTTAAGGTTTACCGGGTTTATGTCAT
TTACCACTTCGTGGTTAAATCGACACCGGTATCTCTTTCTTAATAGTTCA
GCTTGTATTATCTTTGATAGTGCTTGTTTGGACATTTCACTGTGAGAAAA
TTGTGGTGTTTAAAGCAGGCGTCTCGCCTGATCTTTTGCAGCATGGTATG
ATGAAACATGACATTTTACGCTATTGGTTTGCGTTTAAAGTGTAATGATT
AATAGGGATGGATGGGGGTGTTCATATTGGTGGGCGAGAGGTGAAATTCG
TTGACCCTATCAAGATGAACTTCTGCGAAAGCATTCACCAAATACTTCCC
CATTAATCAAGAACGAAAGTTTGGGGATCGAAGACGATCAGATACCGTCG
TAGTCCAAACTATAAACTATGTCGACCAGGGATCGGTTAAAATTTTTTCA
AAATTTAATCGGCACCTTGTGAGAAATCATGAGTGTTTAGATTCCGGGGG
GAGTATGGTCGCAAGTCTGAAACTTAAAGGAATTGACGGAAGGGCACACA
ATGGAGTGGAGCCTGCGGCTTAATTTGACTCAACTCGGGAAAACTTACCA
AGCTAAGATATAGTAAGGATTGACAGACTAAAAGATCTTTCATGATTCTA
TAAGTGGTGGTGCATGGTCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTC
AATTCCGATAACGGACGAGACCTCGACCTGCTAACTAGTAGTATTTATTA
GTCGATATAGACGATAGCTTTTCTGGGGTTTGGAATGATTTCGGTCATCT
CCTGCTTCAAGGAGTGTGTAGTCTGACTCGATAGGTACGAATTAAAACTT
CTTAGAGGGACTACCTGCCTCAAGCAGGCGGAAGTCCGAGGCAATAACAG
GTCTGTGATGCCCTTAGATACCTTGGGCCGCACGCGCGGCTACAATGTAG
GAAACAAAAAGGCTCCTGGTCCGGAAGGATTGGGTAATCATTTGAATTTC
CTACGTAACTGGGCTTGATCTTTGTAATTATTGATCATAAACGAGGAATT
CCTTGTAAGCGTAAGTCATTACCTTATGCTGAATATGTCCCTGCCCTTTG
TACACACCGCCCGTCGCTCCTACCGATCGAATGATACGGTAAAGTTAACG
GATCGTTTTATCTGTGGCAACACTGATATAAATTAAAAGTTATTTAAATC
TCATTGTTTAGAGGAAGGAGAAGTCGTAACAAGGTATCCGTAGGTGAACC
TGCGGATGGATCATTTTAATAAAAAATTTTCAAAATATTTAGTGTATTCT
GACAATTAATTATTGTTTCAGTACAATTTAAAAAAGATGAAATTAAATCC
AAACGCTTCATCGTTTGTACCAAAATTTGTTGCTAAACCAGCAGCACCAG
CACCAGCAGCACCAGTTGCTGTTGTTGCCGAACCAGTAGCAGCACCAGTT
GTTGCAGAACCAACACCAACACCAGCACCAGTAGAAACTAAAGAAGAACC
AACTACCACAGCTACTACAACTTCAGTATCATCAATTAAAACTGAAGAAG
ATTTAGAAAATATTAAACCAACTGAATCAGTATATAAAGTTGAAGATGAT
GACATCGAAGATGATGATGAAGTTGATGAAGTTGCAGAGAAAATTGAACA
AGTTGTAAAAGTATTACCAGAAGATAGCAGAGAACATCTTAATATAGTAT
TTTTAGGACATGTAGATGCAGGTAAATCAACACTTTCAGGTAGTATTATG
GTTTTAACAGGACAAGTTGATCCACATACTCTTGCAAAATATGAAAGAGA
AGCCAAAGAGAACCATCGTGAAGGTTGGATCTATGCATACATTATGGATA
CAAACGAAGAAGAACGTACCAAAGGTAAGACAGTAGAGGTTGGTCGTGCA
CATTTTGAAACCACCAAAAAGAGATACACCATTCTCGATGCTCCAGGTCA
CAGATTAT

Gap no gap
Contig length 3358
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 854826
End point 853802
Strand (PLUS/MINUS) MINUS
Number of clones 359
Number of EST 278
Link to clone list U16527
List of clone(s)

est1=AHA506F,1,590
est2=AHK528F,1,591
est3=AHL576F,1,594
est4=AHQ729F,1,589
est5=SHA661F,1,589
est6=SHH823F,1,589
est7=FC-BL16F,44,640
est8=FC-BL24F,44,643
est9=VHL415F,127,683
est10=VHF851F,140,537
est11=VHG142F,143,808
est12=FC-IC1071Z,203,870
est13=FC-IC0392E,262,870
est14=FC-IC0617F,262,870
est15=FC-IC0617Z,262,870
est16=FC-IC0770F,262,870
est17=FC-IC0770Z,262,870
est18=FC-IC1071F,262,870
est19=FC-IC1075E,262,870
est20=VHK855F,413,1062
est21=VHE244F,554,1148
est22=VHA586F,571,1161
est23=CHF747F,794,1221
est24=CHG692F,794,1421
est25=CHI773F,794,1419
est26=CHM837F,794,1391
est27=CHO248F,794,1433
est28=CHO803F,794,1195
est29=SFK164F,794,1450
est30=SFK216F,794,1449
est31=AHH496F,797,1395
est32=VFG294F,797,1396
est33=VHD583F,797,1331
est34=VHE381F,797,1396
est35=VHF289F,797,1369
est36=VHG238F,797,1396
est37=VHJ647F,797,1369
est38=CHJ566F,816,1395
est39=AHJ584F,819,1394
est40=VHK334F,819,1395
est41=AHG763F,892,1517
est42=VHM640F,893,1493
est43=VHE675F,905,1491
est44=VFD795F,908,1457
est45=VFG146F,926,1494
est46=VHA660F,1032,1356
est47=SLI272E,1045,1638
est48=VHC181F,1086,1627
est49=VHH888F,1190,1659
est50=AHA376F,1262,1848
est51=FC-BL16Z,1315,1968
est52=AHR192F,1366,1826
est53=VFN807F,1366,1939
est54=VFG308F,1404,1949
est55=VFO714F,1405,1906
est56=VFM891F,1441,2064
est57=VSJ507F,1445,1962
est58=VFO216F,1458,1996
est59=SFE142E,1513,2597
est60=VHF745F,1548,1783
est61=CFA138F,1572,2107
est62=SFC755F,1600,1790
est63=VFM557E,1607,2776
est64=FC-BL24Z,1769,1968
est65=VHL814F,1917,2541
est66=CHP418F,1928,2600
est67=CHP866F,1932,2598
est68=CHN437F,1936,2512
est69=CHJ380F,1937,2600
est70=CHI253F,1938,2562
est71=CHG782F,1939,2598
est72=CHJ289F,1943,2583
est73=CHI580F,1946,2602
est74=CHO450F,1946,2444
est75=CHO481F,1946,2591
est76=CHR474F,1946,2592
est77=CHO282F,1948,2582
est78=VFO216Z,1969,2668
est79=CHN729F,1970,2531
est80=VFG294Z,1973,2668
est81=CHG558F,1982,2601
est82=CHM837Z,1984,2251
est83=CHH227F,1993,2603
est84=CHL746F,1996,2162
est85=CHQ616F,1999,2668
est86=CHF453F,2001,2595
est87=VFG146Z,2002,2578
est88=VHA586Z,2004,2759
est89=VHE252F,2004,2632
est90=VFA578F,2015,2270
est91=VFK135F,2026,2609
est92=FC-AG24E,2032,2817
est93=CHQ493F,2034,2559
est94=CFA279E,2039,2736
est95=VHM640Z,2039,2773
est96=VFC822F,2041,2668
est97=CHH331F,2048,2680
est98=VHL415Z,2072,2772
est99=VHE244Z,2073,2776
est100=VHK855Z,2073,2778
est101=VFD795Z,2080,2777
est102=VFO714Z,2098,2775
est103=VFM891Z,2102,2762
est104=SFK584F,2109,2630
est105=VFG308Z,2112,2690
est106=CHR830F,2116,2696
est107=CHQ454F,2144,2668
est108=VSJ628Z,2163,2776
est109=CHI181F,2178,2760
est110=VSJ628F,2186,2740
est111=VHL564F,2187,2744
est112=CHK284F,2205,2504
est113=SSH822X,2218,2870
est114=SSJ116W,2225,2869
est115=CHM248F,2235,2826
est116=VFB624F,2235,2624
est117=SHL567F,2237,2831
est118=CHR441F,2270,2725
est119=CHJ278F,2298,2898
est120=FC-IC0411Z,2319,3032
est121=CHR147F,2331,2921
est122=CHH332F,2336,3000
est123=FC-IC0106F,2337,2805
est124=FC-IC1568F,2337,2673
est125=FC-IC1624Z,2337,2508
est126=FC-IC0102F,2338,2805
est127=FC-IC1216Z,2338,2805
est128=FC-IC0003F,2339,2806
est129=FC-IC0008F,2339,2805
est130=FC-IC0009F,2339,2805
est131=FC-IC0012F,2339,2805
est132=FC-IC0014F,2339,2805
est133=FC-IC0019F,2339,2805
est134=FC-IC0026F,2339,2805
est135=FC-IC0034F,2339,2805
est136=FC-IC0070F,2339,2805
est137=FC-IC0107F,2339,2805
est138=FC-IC0185E,2339,2805
est139=FC-IC0229E,2339,2805
est140=FC-IC0231E,2339,2805
est141=FC-IC0232E,2339,2805
est142=FC-IC0308E,2339,2805
est143=FC-IC0309E,2339,2805
est144=FC-IC0315E,2339,2805
est145=FC-IC0327E,2339,2805
est146=FC-IC0329E,2339,2805
est147=FC-IC0353E,2339,2805
est148=FC-IC0375Z,2339,2798
est149=FC-IC0416E,2339,2805
est150=FC-IC0418E,2339,2805
est151=FC-IC0457E,2339,2805
est152=FC-IC0458Z,2339,2805
est153=FC-IC0510E,2339,2805
est154=FC-IC0526E,2339,2805
est155=FC-IC0563F,2339,2499
est156=FC-IC0563Z,2339,2650
est157=FC-IC0579F,2339,2513
est158=FC-IC0591F,2339,2587
est159=FC-IC0604F,2339,2471
est160=FC-IC0710F,2339,2573
est161=FC-IC0735F,2339,2551
est162=FC-IC0750F,2339,2483
est163=FC-IC0759F,2339,2567
est164=FC-IC0867E,2339,2805
est165=FC-IC0869F,2339,2663
est166=FC-IC0869Z,2339,2805
est167=FC-IC0881F,2339,2542
est168=FC-IC0881Z,2339,2573
est169=FC-IC0882E,2339,2805
est170=FC-IC0914E,2339,2805
est171=FC-IC0929F,2339,2676
est172=FC-IC0947E,2339,2805
est173=FC-IC0957E,2339,2805
est174=FC-IC0959E,2339,2805
est175=FC-IC0962E,2339,2805
est176=FC-IC0965Z,2339,2805
est177=FC-IC0974F,2339,2626
est178=FC-IC0974Z,2339,2805
est179=FC-IC0986E,2339,2805
est180=FC-IC1009E,2339,2869
est181=FC-IC1013E,2339,2805
est182=FC-IC1065F,2339,2666
est183=FC-IC1069F,2339,2606
est184=FC-IC1098F,2339,2703
est185=FC-IC1102E,2339,2805
est186=FC-IC1110F,2339,2573
est187=FC-IC1122E,2339,2805
est188=FC-IC1127E,2339,2805
est189=FC-IC1142Z,2339,2602
est190=FC-IC1145F,2339,2593
est191=FC-IC1153E,2339,2805
est192=FC-IC1173E,2339,2805
est193=FC-IC1198E,2339,2805
est194=FC-IC1202E,2339,2805
est195=FC-IC1205E,2339,2805
est196=FC-IC1209E,2339,2805
est197=FC-IC1211E,2339,2805
est198=FC-IC1216F,2339,2602
est199=FC-IC1230E,2339,2805
est200=FC-IC1239E,2339,2805
est201=FC-IC1244Z,2339,2645
est202=FC-IC1260E,2339,2805
est203=FC-IC1261E,2339,2805
est204=FC-IC1264E,2339,2805
est205=FC-IC1265E,2339,2805
est206=FC-IC1268Z,2339,2602
est207=FC-IC1289E,2339,2805
est208=FC-IC1306E,2339,2805
est209=FC-IC1309F,2339,2483
est210=FC-IC1311E,2339,2805
est211=FC-IC1316F,2339,2668
est212=FC-IC1316Z,2339,2805
est213=FC-IC1324E,2339,2805
est214=FC-IC1335E,2339,2805
est215=FC-IC1384E,2339,2805
est216=FC-IC1390E,2339,2805
est217=FC-IC1400E,2339,2805
est218=FC-IC1439E,2339,2805
est219=FC-IC1465F,2339,2678
est220=FC-IC1476E,2339,2805
est221=FC-IC1486E,2339,2805
est222=FC-IC1498E,2339,2805
est223=FC-IC1508F,2339,2685
est224=FC-IC1508Z,2339,2805
est225=FC-IC1511E,2339,2805
est226=FC-IC1519E,2339,2805
est227=FC-IC1523E,2339,2805
est228=FC-IC1527E,2339,2805
est229=FC-IC1583E,2339,2805
est230=FC-IC1622E,2339,2805
est231=FC-IC1631E,2339,2805
est232=FC-IC1642E,2339,2805
est233=FC-IC1648E,2339,2805
est234=FC-IC1649E,2339,2805
est235=FC-IC1665E,2339,2805
est236=FC-IC1720F,2339,2480
est237=FC-IC1720Z,2339,2805
est238=FC-IC1748F,2339,2736
est239=FC-IC1760F,2339,2805
est240=FC-IC0282E,2340,2805
est241=FC-IC0562E,2340,2805
est242=FC-IC0893E,2340,2805
est243=FC-IC0965F,2340,2642
est244=FC-AA02Z,2354,2812
est245=FC-IC0861E,2375,2805
est246=CFG157F,2383,2994
est247=FC-IC1074Z,2404,2952
est248=FC-IC1728Z,2409,2805
est249=FC-IC1760Z,2409,2805
est250=VHD583Z,2431,3130
est251=CHE813F,2436,3072
est252=CHI561F,2438,3151
est253=SSB348W,2444,3087
est254=FC-IC1785Z,2471,2805
est255=FC-IC0929Z,2480,2805
est256=FC-IC0370Z,2487,2711
est257=VHF289Z,2493,3127
est258=VHE675Z,2498,3196
est259=CHF358F,2500,3196
est260=FC-IC1074F,2503,3055
est261=FC-IC1110Z,2505,2805
est262=FC-IC1753Z,2515,2805
est263=FC-IC1748Z,2518,2805
est264=FC-IC1145Z,2523,2805
est265=CFJ310F,2525,3126
est266=VFF245F,2528,2793
est267=VFF245Z,2528,2774
est268=FC-IC1098Z,2536,2805
est269=CHF747Z,2573,3358
est270=VHE381Z,2573,3257
est271=FC-IC0591Z,2577,2805
est272=FC-IC1268F,2580,2805
est273=CFA138Z,2581,3089
est274=SHJ412F,2581,2723
est275=FC-IC1764Z,2584,2805
est276=CHG662F,2615,3256
est277=FC-IC1735Z,2615,2805
est278=FC-IC1244F,2618,2805
Translated Amino Acid sequence
kkseqadasersq*atdsmqaaavir*yqcahvvllpssgaasssghfladkrvsesvep
npmd*pvetlnsdspnhvhcdwqqq*ctgasgpynevpsldr*llggelqtataicfias
ngtshrm*qarkkpvlqinrgacavlf*vcmrshtpggdsnvgfldvskrlgqcnr*rrs
nkeicwqsadllcgawlkarfnylsannvtfdesf*lvikvtgsnpvil*plqretltkq
skqkisfvinm***lis*yvlstcltg*scq*syaclkd*amhv*v*ilvr*ncrrlitt
vin**tfgfylldnrsksglihtsdg*lateaqrllafyqclrvlgdte*ycrsriylrq
vycvtalstfdgtvlayhgcng*rgirvrfrrgslrngyhfygrqqarkllnpntgk**q
*isipilfggqlk*tqiktln*hnwraslvpaargnsssnsiy*sccs*kars*slrftg
fmsfttswlnrhrylflnssaciifdsacldisl*encgv*srrla*sfaawydet*hft
llvcv*svminrdgwgcsywwargeir*pyqdellrkhspntsplikneslgieddqips
*skl*tmstrdrlkffqnligtl*eimsv*ipggvwsqv*nlkelteghtmewslrlnlt
qlgktyqaki**gltd*kifhdsisggawsflvggaiclvnsdngrdldlltssiy*si*
tiaflgfgmisviscfkecvv*ldryelkllrgttclkqaevrgnnrsvmpldtlgrtrg
ynvgnkkapgpeglgnhlnflrnwa*sl*lliineeflvsvshylmlnmslpfvhtarrs
yrsndtvkltdrficgntdin*klfkshcleegevvtryp*vnlrmdhfnkkfskylvys
dn*LLFQYNLKKMKLNPNASSFVPKFVAKPAAPAPAAPVAVVAEPVAAPVVAEPTPTPAP
VETKEEPTTTATTTSVSSIKTEEDLENIKPTESVYKVEDDDIEDDDEVDEVAEKIEQVVK
VLPEDSREHLNIVFLGHVDAGKSTLSGSIMVLTGQVDPHTLAKYEREAKENHREGWIYAY
IMDTNEEERTKGKTVEVGRAHFETTKKRYTILDAPGHRL


Translated Amino Acid sequence (All Frames)
Frame A:
kkseqadasersq*atdsmqaaavir*yqcahvvllpssgaasssghfladkrvsesvep
npmd*pvetlnsdspnhvhcdwqqq*ctgasgpynevpsldr*llggelqtataicfias
ngtshrm*qarkkpvlqinrgacavlf*vcmrshtpggdsnvgfldvskrlgqcnr*rrs
nkeicwqsadllcgawlkarfnylsannvtfdesf*lvikvtgsnpvil*plqretltkq
skqkisfvinm***lis*yvlstcltg*scq*syaclkd*amhv*v*ilvr*ncrrlitt
vin**tfgfylldnrsksglihtsdg*lateaqrllafyqclrvlgdte*ycrsriylrq
vycvtalstfdgtvlayhgcng*rgirvrfrrgslrngyhfygrqqarkllnpntgk**q
*isipilfggqlk*tqiktln*hnwraslvpaargnsssnsiy*sccs*kars*slrftg
fmsfttswlnrhrylflnssaciifdsacldisl*encgv*srrla*sfaawydet*hft
llvcv*svminrdgwgcsywwargeir*pyqdellrkhspntsplikneslgieddqips
*skl*tmstrdrlkffqnligtl*eimsv*ipggvwsqv*nlkelteghtmewslrlnlt
qlgktyqaki**gltd*kifhdsisggawsflvggaiclvnsdngrdldlltssiy*si*
tiaflgfgmisviscfkecvv*ldryelkllrgttclkqaevrgnnrsvmpldtlgrtrg
ynvgnkkapgpeglgnhlnflrnwa*sl*lliineeflvsvshylmlnmslpfvhtarrs
yrsndtvkltdrficgntdin*klfkshcleegevvtryp*vnlrmdhfnkkfskylvys
dn*LLFQYNLKKMKLNPNASSFVPKFVAKPAAPAPAAPVAVVAEPVAAPVVAEPTPTPAP
VETKEEPTTTATTTSVSSIKTEEDLENIKPTESVYKVEDDDIEDDDEVDEVAEKIEQVVK
VLPEDSREHLNIVFLGHVDAGKSTLSGSIMVLTGQVDPHTLAKYEREAKENHREGWIYAY
IMDTNEEERTKGKTVEVGRAHFETTKKRYTILDAPGHRL


Frame B:
rrvskqmqvkeasrrltacklqq*yasisvlmwscclaavpprlldifwqtngyrnqlsl
tpwispwklstaihpimctatgnsssvpervahitrflhwigscwvasskppqpfallra
marvtgcskrvknlcykliverapsfsryacaltpqaatamsaf*tcqsd*anaigdgga
irrsvgkvliyfvehg*rpdlticqltm*hlmnlfnw**k*rdlil*fcdlfkgkh*pnn
qnkk*vl*licnsd*yhdtcylha*lvdpasshmlvskikpcmskykflydetadgslqq
**tnrlsgftfwitavnrg*yiqamgdwqrklsdy*hstnafgfwvipnniadrgfifdk
stvslpyqlsmvrywptmvvtgngelgfdsgega*emattstegsrranysipirgssdn
kyqylsflegn*nehklkllintiggqvwcqqpavipapiaytkvvavkklvvev*glpg
lchlplrg*idtgisflivqlvlslivlvwtfhcekivvfkagvspdllqhgmmkhdilr
ywfafkv**ligmdggvhiggrevkfvdpikmnfcesihqilph*srtkvwgsktiryrr
spnyklcrpgig*nffki*sapceks*vfrfrgeygrkset*rn*rkgtqwsgacgli*l
nsgkltklryskd*qtkrsfmil*vvvhgrs*lverfvwsipitdetstc*lvvfisryr
r*lfwgle*frsspasrsv*sdsigtn*nfleglpassrrkseaitgl*cp*ipwaaraa
tm*etkrllvrkdwvii*isyvtgldlcny*s*trnsl*a*vitlc*icpcplytppvap
tdrmir*s*rivlsvatli*iksylnliv*rkeks*qgirr*tcgwiiliknfqni*cil
tinycfsti*kr*n*iqtlhrlyqnlllnqqhqhqqhqllllpnq*qhqllqnqhqhqhq
*klkknqlpqllqlqyhqlklkki*kilnqlnqyiklkmmtskmmmklmklqrklnkl*k
yyqkiaenili*yf*dm*mqvnqhfqvvlwf*qdklihillqnmkekpkrtivkvgsmht
lwiqtkknvpkvrq*rlvvhilkppkrdtpfsmlqvtdy


Frame C:
ee*asrck*kkpvgd*qhascssdtlvsvcscgpaa*qrcrlvfwtffgrqtgigis*a*
phglargnsqqrftqscalrlatavvyrsewpi*rgsftgsvvagwrapnrhshllyceq
whespdvasa*ktcatn*swsvrrpflgmhalshprrrqqcrlsrrvkatrpmq*vteeq
*gdllakc*ftlwsmvkgqi*lsvs*qcni**iflignksdgi*scnfvtsskgninqti
ktknkfcn*yvivinimirviymlnwlilpvviclsqrlshaclsinsctmklqtahyns
dklidfrvlpfg*pq*igantykrwvtgngssaiisilpmpsgfg*yriilqiedlssts
llchcpinfrwygiglpwl*rvtgn*gsiperepekwlpllrkaagaqitqsqygevvti
nintypfwraiemntn*ns*ltqlegksgasspr*fqlq*hilkllqlkss*lkfkvyrv
yviyhfvvkstpvsls**fslyyl**clfghftvrklwclkqasrlifcsmv**nmtfya
iglrlkcnd**gwmgvfilvger*nsltlsr*tsakaftkyfpinqerkfgdrrrsdtvv
vqtinyvdqgsvkifskfnrhlvrnhecldsggsmvaslklkgidgrahngvepaa*fds
trenlps*divridrlkdls*fykwwcmvvlswwsdlsgqfr*rtrprpan**yllvdid
dsfsgvwndfghlllqgvcsltr*vrikts*rdylpqaggsprq*qvcdalrylgpharl
qcrkqkgswsgrig*sfefpt*lglifviidhkrgipckrkslpyaeyvpalcthrpsll
pie*ygkvngsfylwqh*yklkvi*islfrgrrsrnkvsvgepadgsf**kifkifsvf*
qliivsvqfkkdeikskrfivctkicc*tsststsstsccccrtssstsccrtntntsts
rn*rrtnyhsyynfsiin*n*rrfrky*tn*isi*s*r**hrr***s**scren*tscks
itrr*qrts*ysifrtcrcr*intfr*yygfnrts*styscki*krsqreps*rldlcih
ygykrrrtyqr*dsrgwsctf*nhqkeihhsrcsrsqi


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U16527-1 (Contig-U16527-1Q)
/CSM_Contig/Contig-U16527-1Q.Seq.d
(3358 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U16527-1 (Contig-U16527-1Q) /CSM_Contig/Conti... 6657 0.0
Contig-U16528-1 (Contig-U16528-1Q) /CSM_Contig/Conti... 1461 0.0
Contig-U16472-1 (Contig-U16472-1Q) /CSM_Contig/Conti... 1289 0.0
Contig-U16254-1 (Contig-U16254-1Q) /CSM_Contig/Conti... 295 2e-79
Contig-U15689-1 (Contig-U15689-1Q) /CSM_Contig/Conti... 127 1e-28
Contig-U16473-1 (Contig-U16473-1Q) /CSM_Contig/Conti... 62 6e-09
Contig-U12301-1 (Contig-U12301-1Q) /CSM_Contig/Conti... 50 2e-05
Contig-U12500-1 (Contig-U12500-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U10804-1 (Contig-U10804-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U04691-1 (Contig-U04691-1Q) /CSM_Contig/Conti... 44 0.001

>Contig-U16527-1 (Contig-U16527-1Q) /CSM_Contig/Contig-U16527-1Q.Seq.d
Length = 3358

Score = 6657 bits (3358), Expect = 0.0
Identities = 3358/3358 (100%)
Strand = Plus / Plus


Query: 1 aagaagagtgagcaagcagatgcaagtgaaagaagccagtaggcgactgacagcatgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagaagagtgagcaagcagatgcaagtgaaagaagccagtaggcgactgacagcatgcaa 60


Query: 61 gctgcagcagtgatacgctagtatcagtgtgctcatgtggtcctgctgcctagcagcggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctgcagcagtgatacgctagtatcagtgtgctcatgtggtcctgctgcctagcagcggt 120


Query: 121 gccgcctcgtcttctggacattttttggcagacaaacgggtatcggaatcagttgagcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccgcctcgtcttctggacattttttggcagacaaacgggtatcggaatcagttgagcct 180


Query: 181 aaccccatggattagcccgtggaaactctcaacagcgattcacccaatcatgtgcactgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaccccatggattagcccgtggaaactctcaacagcgattcacccaatcatgtgcactgc 240


Query: 241 gactggcaacagcagtagtgtaccggagcgagtggcccatataacgaggttccttcactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gactggcaacagcagtagtgtaccggagcgagtggcccatataacgaggttccttcactg 300


Query: 301 gatcggtagttgctgggtggcgagctccaaaccgccacagccatttgctttattgcgagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatcggtagttgctgggtggcgagctccaaaccgccacagccatttgctttattgcgagc 360


Query: 361 aatggcacgagtcaccggatgtagcaagcgcgtaaaaaacctgtgctacaaattaatcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatggcacgagtcaccggatgtagcaagcgcgtaaaaaacctgtgctacaaattaatcgt 420


Query: 421 ggagcgtgcgccgtccttttctaggtatgcatgcgctctcacaccccaggcggcgacagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggagcgtgcgccgtccttttctaggtatgcatgcgctctcacaccccaggcggcgacagc 480


Query: 481 aatgtcggctttctagacgtgtcaaagcgactaggccaatgcaataggtgacggaggagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatgtcggctttctagacgtgtcaaagcgactaggccaatgcaataggtgacggaggagc 540


Query: 541 aataaggagatctgttggcaaagtgctgatttactttgtggagcatggttaaaggccaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aataaggagatctgttggcaaagtgctgatttactttgtggagcatggttaaaggccaga 600


Query: 601 tttaactatctgtcagctaacaatgtaacatttgatgaatctttttaattggtaataaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttaactatctgtcagctaacaatgtaacatttgatgaatctttttaattggtaataaaa 660


Query: 661 gtgacgggatctaatcctgtaattttgtgacctcttcaaagggaaacattaaccaaacaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtgacgggatctaatcctgtaattttgtgacctcttcaaagggaaacattaaccaaacaa 720


Query: 721 tcaaaacaaaaaataagttttgtaattaatatgtaatagtgattaatatcatgatacgtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcaaaacaaaaaataagttttgtaattaatatgtaatagtgattaatatcatgatacgtg 780


Query: 781 ttatctacatgcttaactggttgatcctgccagtagtcatatgcttgtctcaaagattaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttatctacatgcttaactggttgatcctgccagtagtcatatgcttgtctcaaagattaa 840


Query: 841 gccatgcatgtctaagtataaattcttgtacgatgaaactgcagacggctcattacaaca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gccatgcatgtctaagtataaattcttgtacgatgaaactgcagacggctcattacaaca 900


Query: 901 gtgataaactaatagactttcgggttttaccttttggataaccgcagtaaatcggggcta 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gtgataaactaatagactttcgggttttaccttttggataaccgcagtaaatcggggcta 960


Query: 961 atacatacaagcgatgggtgactggcaacggaagctcagcgattattagcattctaccaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 atacatacaagcgatgggtgactggcaacggaagctcagcgattattagcattctaccaa 1020


Query: 1021 tgccttcgggttttgggtgataccgaataatattgcagatcgaggatttatcttcgacaa 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tgccttcgggttttgggtgataccgaataatattgcagatcgaggatttatcttcgacaa 1080


Query: 1081 gtctactgtgtcactgccctatcaactttcgatggtacggtattggcctaccatggttgt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gtctactgtgtcactgccctatcaactttcgatggtacggtattggcctaccatggttgt 1140


Query: 1141 aacgggtaacggggaattagggttcgattccggagagggagcctgagaaatggctaccac 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aacgggtaacggggaattagggttcgattccggagagggagcctgagaaatggctaccac 1200


Query: 1201 ttctacggaaggcagcaggcgcgcaaattactcaatcccaatacggggaagtagtgacaa 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ttctacggaaggcagcaggcgcgcaaattactcaatcccaatacggggaagtagtgacaa 1260


Query: 1261 taaatatcaatacctatcctttttggagggcaattgaaatgaacacaaattaaaactctt 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 taaatatcaatacctatcctttttggagggcaattgaaatgaacacaaattaaaactctt 1320


Query: 1321 aattaacacaattggagggcaagtctggtgccagcagcccgcggtaattccagctccaat 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 aattaacacaattggagggcaagtctggtgccagcagcccgcggtaattccagctccaat 1380


Query: 1381 agcatatactaaagttgttgcagttaaaaagctcgtagttgaagtttaaggtttaccggg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 agcatatactaaagttgttgcagttaaaaagctcgtagttgaagtttaaggtttaccggg 1440


Query: 1441 tttatgtcatttaccacttcgtggttaaatcgacaccggtatctctttcttaatagttca 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 tttatgtcatttaccacttcgtggttaaatcgacaccggtatctctttcttaatagttca 1500


Query: 1501 gcttgtattatctttgatagtgcttgtttggacatttcactgtgagaaaattgtggtgtt 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gcttgtattatctttgatagtgcttgtttggacatttcactgtgagaaaattgtggtgtt 1560


Query: 1561 taaagcaggcgtctcgcctgatcttttgcagcatggtatgatgaaacatgacattttacg 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 taaagcaggcgtctcgcctgatcttttgcagcatggtatgatgaaacatgacattttacg 1620


Query: 1621 ctattggtttgcgtttaaagtgtaatgattaatagggatggatgggggtgttcatattgg 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 ctattggtttgcgtttaaagtgtaatgattaatagggatggatgggggtgttcatattgg 1680


Query: 1681 tgggcgagaggtgaaattcgttgaccctatcaagatgaacttctgcgaaagcattcacca 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 tgggcgagaggtgaaattcgttgaccctatcaagatgaacttctgcgaaagcattcacca 1740


Query: 1741 aatacttccccattaatcaagaacgaaagtttggggatcgaagacgatcagataccgtcg 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 aatacttccccattaatcaagaacgaaagtttggggatcgaagacgatcagataccgtcg 1800


Query: 1801 tagtccaaactataaactatgtcgaccagggatcggttaaaattttttcaaaatttaatc 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 tagtccaaactataaactatgtcgaccagggatcggttaaaattttttcaaaatttaatc 1860


Query: 1861 ggcaccttgtgagaaatcatgagtgtttagattccggggggagtatggtcgcaagtctga 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 ggcaccttgtgagaaatcatgagtgtttagattccggggggagtatggtcgcaagtctga 1920


Query: 1921 aacttaaaggaattgacggaagggcacacaatggagtggagcctgcggcttaatttgact 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 aacttaaaggaattgacggaagggcacacaatggagtggagcctgcggcttaatttgact 1980


Query: 1981 caactcgggaaaacttaccaagctaagatatagtaaggattgacagactaaaagatcttt 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 caactcgggaaaacttaccaagctaagatatagtaaggattgacagactaaaagatcttt 2040


Query: 2041 catgattctataagtggtggtgcatggtcgttcttagttggtggagcgatttgtctggtc 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 catgattctataagtggtggtgcatggtcgttcttagttggtggagcgatttgtctggtc 2100


Query: 2101 aattccgataacggacgagacctcgacctgctaactagtagtatttattagtcgatatag 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 aattccgataacggacgagacctcgacctgctaactagtagtatttattagtcgatatag 2160


Query: 2161 acgatagcttttctggggtttggaatgatttcggtcatctcctgcttcaaggagtgtgta 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 acgatagcttttctggggtttggaatgatttcggtcatctcctgcttcaaggagtgtgta 2220


Query: 2221 gtctgactcgataggtacgaattaaaacttcttagagggactacctgcctcaagcaggcg 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 gtctgactcgataggtacgaattaaaacttcttagagggactacctgcctcaagcaggcg 2280


Query: 2281 gaagtccgaggcaataacaggtctgtgatgcccttagataccttgggccgcacgcgcggc 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 gaagtccgaggcaataacaggtctgtgatgcccttagataccttgggccgcacgcgcggc 2340


Query: 2341 tacaatgtaggaaacaaaaaggctcctggtccggaaggattgggtaatcatttgaatttc 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 tacaatgtaggaaacaaaaaggctcctggtccggaaggattgggtaatcatttgaatttc 2400


Query: 2401 ctacgtaactgggcttgatctttgtaattattgatcataaacgaggaattccttgtaagc 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 ctacgtaactgggcttgatctttgtaattattgatcataaacgaggaattccttgtaagc 2460


Query: 2461 gtaagtcattaccttatgctgaatatgtccctgccctttgtacacaccgcccgtcgctcc 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 gtaagtcattaccttatgctgaatatgtccctgccctttgtacacaccgcccgtcgctcc 2520


Query: 2521 taccgatcgaatgatacggtaaagttaacggatcgttttatctgtggcaacactgatata 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 taccgatcgaatgatacggtaaagttaacggatcgttttatctgtggcaacactgatata 2580


Query: 2581 aattaaaagttatttaaatctcattgtttagaggaaggagaagtcgtaacaaggtatccg 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 aattaaaagttatttaaatctcattgtttagaggaaggagaagtcgtaacaaggtatccg 2640


Query: 2641 taggtgaacctgcggatggatcattttaataaaaaattttcaaaatatttagtgtattct 2700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 taggtgaacctgcggatggatcattttaataaaaaattttcaaaatatttagtgtattct 2700


Query: 2701 gacaattaattattgtttcagtacaatttaaaaaagatgaaattaaatccaaacgcttca 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 gacaattaattattgtttcagtacaatttaaaaaagatgaaattaaatccaaacgcttca 2760


Query: 2761 tcgtttgtaccaaaatttgttgctaaaccagcagcaccagcaccagcagcaccagttgct 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 tcgtttgtaccaaaatttgttgctaaaccagcagcaccagcaccagcagcaccagttgct 2820


Query: 2821 gttgttgccgaaccagtagcagcaccagttgttgcagaaccaacaccaacaccagcacca 2880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 gttgttgccgaaccagtagcagcaccagttgttgcagaaccaacaccaacaccagcacca 2880


Query: 2881 gtagaaactaaagaagaaccaactaccacagctactacaacttcagtatcatcaattaaa 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 gtagaaactaaagaagaaccaactaccacagctactacaacttcagtatcatcaattaaa 2940


Query: 2941 actgaagaagatttagaaaatattaaaccaactgaatcagtatataaagttgaagatgat 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 actgaagaagatttagaaaatattaaaccaactgaatcagtatataaagttgaagatgat 3000


Query: 3001 gacatcgaagatgatgatgaagttgatgaagttgcagagaaaattgaacaagttgtaaaa 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 gacatcgaagatgatgatgaagttgatgaagttgcagagaaaattgaacaagttgtaaaa 3060


Query: 3061 gtattaccagaagatagcagagaacatcttaatatagtatttttaggacatgtagatgca 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 gtattaccagaagatagcagagaacatcttaatatagtatttttaggacatgtagatgca 3120


Query: 3121 ggtaaatcaacactttcaggtagtattatggttttaacaggacaagttgatccacatact 3180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 ggtaaatcaacactttcaggtagtattatggttttaacaggacaagttgatccacatact 3180


Query: 3181 cttgcaaaatatgaaagagaagccaaagagaaccatcgtgaaggttggatctatgcatac 3240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 cttgcaaaatatgaaagagaagccaaagagaaccatcgtgaaggttggatctatgcatac 3240


Query: 3241 attatggatacaaacgaagaagaacgtaccaaaggtaagacagtagaggttggtcgtgca 3300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 attatggatacaaacgaagaagaacgtaccaaaggtaagacagtagaggttggtcgtgca 3300


Query: 3301 cattttgaaaccaccaaaaagagatacaccattctcgatgctccaggtcacagattat 3358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3301 cattttgaaaccaccaaaaagagatacaccattctcgatgctccaggtcacagattat 3358


>Contig-U16528-1 (Contig-U16528-1Q) /CSM_Contig/Contig-U16528-1Q.Seq.d
Length = 1869

Score = 1461 bits (737), Expect = 0.0
Identities = 737/737 (100%)
Strand = Plus / Plus


Query: 2622 agtcgtaacaaggtatccgtaggtgaacctgcggatggatcattttaataaaaaattttc 2681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtcgtaacaaggtatccgtaggtgaacctgcggatggatcattttaataaaaaattttc 60


Query: 2682 aaaatatttagtgtattctgacaattaattattgtttcagtacaatttaaaaaagatgaa 2741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaatatttagtgtattctgacaattaattattgtttcagtacaatttaaaaaagatgaa 120


Query: 2742 attaaatccaaacgcttcatcgtttgtaccaaaatttgttgctaaaccagcagcaccagc 2801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attaaatccaaacgcttcatcgtttgtaccaaaatttgttgctaaaccagcagcaccagc 180


Query: 2802 accagcagcaccagttgctgttgttgccgaaccagtagcagcaccagttgttgcagaacc 2861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accagcagcaccagttgctgttgttgccgaaccagtagcagcaccagttgttgcagaacc 240


Query: 2862 aacaccaacaccagcaccagtagaaactaaagaagaaccaactaccacagctactacaac 2921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacaccaacaccagcaccagtagaaactaaagaagaaccaactaccacagctactacaac 300


Query: 2922 ttcagtatcatcaattaaaactgaagaagatttagaaaatattaaaccaactgaatcagt 2981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcagtatcatcaattaaaactgaagaagatttagaaaatattaaaccaactgaatcagt 360


Query: 2982 atataaagttgaagatgatgacatcgaagatgatgatgaagttgatgaagttgcagagaa 3041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atataaagttgaagatgatgacatcgaagatgatgatgaagttgatgaagttgcagagaa 420


Query: 3042 aattgaacaagttgtaaaagtattaccagaagatagcagagaacatcttaatatagtatt 3101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aattgaacaagttgtaaaagtattaccagaagatagcagagaacatcttaatatagtatt 480


Query: 3102 tttaggacatgtagatgcaggtaaatcaacactttcaggtagtattatggttttaacagg 3161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttaggacatgtagatgcaggtaaatcaacactttcaggtagtattatggttttaacagg 540


Query: 3162 acaagttgatccacatactcttgcaaaatatgaaagagaagccaaagagaaccatcgtga 3221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acaagttgatccacatactcttgcaaaatatgaaagagaagccaaagagaaccatcgtga 600


Query: 3222 aggttggatctatgcatacattatggatacaaacgaagaagaacgtaccaaaggtaagac 3281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aggttggatctatgcatacattatggatacaaacgaagaagaacgtaccaaaggtaagac 660


Query: 3282 agtagaggttggtcgtgcacattttgaaaccaccaaaaagagatacaccattctcgatgc 3341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agtagaggttggtcgtgcacattttgaaaccaccaaaaagagatacaccattctcgatgc 720


Query: 3342 tccaggtcacagattat 3358
|||||||||||||||||
Sbjct: 721 tccaggtcacagattat 737


>Contig-U16472-1 (Contig-U16472-1Q) /CSM_Contig/Contig-U16472-1Q.Seq.d
Length = 968

Score = 1289 bits (650), Expect = 0.0
Identities = 664/666 (99%), Gaps = 2/666 (0%)
Strand = Plus / Plus


Query: 2004 taagatatagtaaggattgacagactaaaagatctttcatgattctataagtggtggtgc 2063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taagatatagtaaggattgacagactaaaagatctttcatgattctataagtggtggtgc 60


Query: 2064 atggtcgttcttagttggtggagcgatttgtctggtcaattccgataacggacgagacct 2123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggtcgttcttagttggtggagcgatttgtctggtcaattccgataacggacgagacct 120


Query: 2124 cgacc-tgctaactagtagtatttattagtcgatatagacgatagcttttctggggtttg 2182
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgaccctgctaactagtagtatttattagtcgatatagacgatagcttttctggggtttg 180


Query: 2183 gaatgatttcggtcatctcctgcttcaaggagtgtgtagtctgactcgataggtacgaat 2242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaatgatttcggtcatctcctgcttcaaggagtgtgtagtctgactcgataggtacgaat 240


Query: 2243 taaaacttcttagagggactacctgcctcaagcaggcggaagtccgaggcaataacaggt 2302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taaaacttcttagagggactacctgcctcaagcaggcggaagtccgaggcaataacaggt 300


Query: 2303 ctgtgatgcccttagataccttgggccgcacgcgcggctacaatgtaggaaacaaaaagg 2362
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 301 ctgtgatgcccttagataccttgggccgcacgcgcg-ctacaatgtaggaaacaaaaagg 359


Query: 2363 ctcctggtccggaaggattgggtaatcatttgaatttcctacgtaactgggcttgatctt 2422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctcctggtccggaaggattgggtaatcatttgaatttcctacgtaactgggcttgatctt 419


Query: 2423 tgtaattattgatcataaacgaggaattccttgtaagcgtaagtcattaccttatgctga 2482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tgtaattattgatcataaacgaggaattccttgtaagcgtaagtcattaccttatgctga 479


Query: 2483 atatgtccctgccctttgtacacaccgcccgtcgctcctaccgatcgaatgatacggtaa 2542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 atatgtccctgccctttgtacacaccgcccgtcgctcctaccgatcgaatgatacggtaa 539


Query: 2543 agttaacggatcgttttatctgtggcaacactgatataaattaaaagttatttaaatctc 2602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 agttaacggatcgttttatctgtggcaacactgatataaattaaaagttatttaaatctc 599


Query: 2603 attgtttagaggaaggagaagtcgtaacaaggtatccgtaggtgaacctgcggatggatc 2662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 attgtttagaggaaggagaagtcgtaacaaggtatccgtaggtgaacctgcggatggatc 659


Query: 2663 atttta 2668
||||||
Sbjct: 660 atttta 665


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 38,179
Number of Sequences: 8402
Number of extensions: 38179
Number of successful extensions: 4779
Number of sequences better than 10.0: 298
length of query: 3358
length of database: 8,075,542
effective HSP length: 17
effective length of query: 3341
effective length of database: 7,932,708
effective search space: 26503177428
effective search space used: 26503177428
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 4.11
Homology vs DNA
Query= Contig-U16527-1 (Contig-U16527-1Q) /CSM_Contig/Contig-U16527-1Q.Seq.d
(3358 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AY171066) Dictyostelium discoideum extrachromosomal palindr... 2694 0.0 4
(X00134) Dictyostelium discoideum 17S rRNA sequence. 1943 0.0 3
(K02641) Slime mold (D.discoideum) 17S small subunit ribosom... 1943 0.0 3
(AM168071) Dictyostelium discoideum 18S rRNA gene, isolate NC4. 1943 0.0 3
(AM168040) Dictyostelium discoideum 18S rRNA gene, isolate 9... 1683 0.0 4
(AM168038) Dictyostelium dimigraformum 18S rRNA gene, isolat... 1677 0.0 4
(DQ340385) Dictyostelium citrinum 17S ribosomal RNA, 5.8S ri... 1655 0.0 8
(AM168039) Dictyostelium discoideum 18S rRNA gene, isolate V34. 1655 0.0 4
(AM168033) Dictyostelium citrinum 18S rRNA gene, isolate OH494. 1647 0.0 4
(AM168044) Dictyostelium intermedium 18S rRNA gene, isolate ... 1643 0.0 4
(X00601) Dictyostelium discoideum ribosomal RNA gene. 1485 0.0 8
(AM168041) Dictyostelium firmibasis 18S rRNA gene, isolate T... 1445 0.0 5
(AY040331) Dictyostelium giganteum 18S ribosomal RNA gene, p... 1415 0.0 11
(AM168042) Dictyostelium giganteum 18S rRNA gene, isolate WS... 1415 0.0 8
(AM168031) Dictyostelium brunneum 18S rRNA gene, isolate WS700. 1400 0.0 8
(AM168065) Dictyostelium rosarium 18S rRNA gene, isolate M45. 1392 0.0 8
(AM168068) Dictyostelium sphaerocephalum 18S rRNA gene, isol... 1384 0.0 8
(AM168034) Dictyostelium clavatum 18S rRNA gene, isolate TNS... 1384 0.0 8
(AM168064) Dictyostelium robustum 18S rRNA gene, isolate TNS... 1368 0.0 8
(AM168035) Dictyostelium clavatum 18S rRNA gene, isolate TNS... 1368 0.0 8
(AM168050) Dictyostelium medium 18S rRNA gene, isolate TNS-C... 1352 0.0 10
(AM168043) Dictyostelium implicatum 18S rRNA gene, isolate 9... 1336 0.0 3
(AM168049) Dictyostelium macrocephalum 18S rRNA gene, isolat... 1332 0.0 3
(AU272101) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 1322 0.0 1
(BJ421615) Dictyostelium discoideum cDNA clone:ddv43c11, 5' ... 1320 0.0 1
(AM168030) Dictyostelium brefeldianum 18S rRNA gene, isolate... 1292 0.0 3
(AY040333) Dictyostelium mucoroides 18S ribosomal RNA gene, ... 1289 0.0 11
(AM168054) Dictyostelium mucoroides 18S rRNA gene, isolate S... 1285 0.0 3
(AM168032) Dictyostelium capitatum 18S rRNA gene, isolate 91... 1285 0.0 3
(BJ424509) Dictyostelium discoideum cDNA clone:ddv52n14, 5' ... 1285 0.0 1
(AM168028) Dictyostelium aureum 18S rRNA gene, isolate SL1. 1281 0.0 3
(BJ416454) Dictyostelium discoideum cDNA clone:ddv26a15, 5' ... 1279 0.0 1
(BJ369404) Dictyostelium discoideum cDNA clone:ddc50o12, 5' ... 1269 0.0 1
(BJ365576) Dictyostelium discoideum cDNA clone:ddc35g24, 5' ... 1245 0.0 1
(AM168055) Dictyostelium mucoroides var. stoloniferum 18S rR... 1243 0.0 11
(BJ416563) Dictyostelium discoideum cDNA clone:ddv26f24, 5' ... 1237 0.0 1
(AM168059) Dictyostelium pseudobrefeldianum 18S rRNA gene, i... 1233 0.0 4
(AM168037) Dictyostelium crassicaule 18S rRNA gene, isolate ... 1233 0.0 5
(BJ366646) Dictyostelium discoideum cDNA clone:ddc39b19, 5' ... 1233 0.0 1
(AM167876) Dictyostelium auroecephalum 18S rRNA gene, isolat... 1221 0.0 4
(FJ424862) Dictyostelium purpureum strain QSpu19 17S ribosom... 1217 0.0 5
(FJ424860) Dictyostelium purpureum strain QSpu35 17S ribosom... 1217 0.0 5
(FJ424859) Dictyostelium purpureum strain QSpu25 17S ribosom... 1217 0.0 5
(FJ424858) Dictyostelium purpureum strain QSpu34 17S ribosom... 1217 0.0 5
(FJ424856) Dictyostelium purpureum strain QSpu24 17S ribosom... 1217 0.0 5
(FJ424855) Dictyostelium purpureum strain QSpu22 17S ribosom... 1217 0.0 5
(FJ424854) Dictyostelium purpureum strain QSpu20 17S ribosom... 1217 0.0 5
(FJ424853) Dictyostelium purpureum strain QSpu18 17S ribosom... 1217 0.0 5
(FJ424852) Dictyostelium purpureum strain QSpu17 17S ribosom... 1217 0.0 5
(FJ424851) Dictyostelium purpureum strain QSpu16 17S ribosom... 1217 0.0 5
(FJ424850) Dictyostelium purpureum strain QSpu15 17S ribosom... 1217 0.0 5
(FJ424849) Dictyostelium purpureum strain QSpu14 17S ribosom... 1217 0.0 5
(FJ424848) Dictyostelium purpureum strain QSpu13 17S ribosom... 1217 0.0 5
(FJ424847) Dictyostelium purpureum strain QSpu12 17S ribosom... 1217 0.0 5
(FJ424846) Dictyostelium purpureum strain QSpu11 17S ribosom... 1217 0.0 5
(FJ424845) Dictyostelium purpureum strain QSpu10 17S ribosom... 1217 0.0 5
(FJ424844) Dictyostelium purpureum strain QSpu9 17S ribosoma... 1217 0.0 5
(FJ424843) Dictyostelium purpureum strain QSpu8 17S ribosoma... 1217 0.0 5
(FJ424842) Dictyostelium purpureum strain QSpu7 17S ribosoma... 1217 0.0 5
(FJ424841) Dictyostelium purpureum strain QSpu5 17S ribosoma... 1217 0.0 5
(FJ424840) Dictyostelium purpureum strain QSpu3 17S ribosoma... 1217 0.0 5
(FJ424839) Dictyostelium purpureum strain QSpu2 17S ribosoma... 1217 0.0 5
(AU272107) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 1205 0.0 1
(AU272106) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 1205 0.0 1
(AU271811) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 1205 0.0 1
(FJ424828) Dictyostelium purpureum strain QSpu36 17S ribosom... 1201 0.0 5
(FJ424827) Dictyostelium purpureum strain QSpu37 17S ribosom... 1201 0.0 5
(FJ424826) Dictyostelium purpureum strain QSpu4 17S ribosoma... 1201 0.0 5
(DQ340386) Dictyostelium purpureum 17S ribosomal RNA, 5.8S r... 1201 0.0 5
(AY040335) Dictyostelium purpureum 18S ribosomal RNA gene, p... 1201 0.0 6
(FJ424836) Dictyostelium purpureum strain QSpu28 17S ribosom... 1197 0.0 5
(FJ424835) Dictyostelium purpureum strain QSpu27 17S ribosom... 1197 0.0 5
(FJ424831) Dictyostelium purpureum strain QSpu21 17S ribosom... 1197 0.0 5
(BJ388382) Dictyostelium discoideum cDNA clone:dds9c11, 5' e... 1191 0.0 1
(BJ368609) Dictyostelium discoideum cDNA clone:ddc47j10, 5' ... 1185 0.0 1
(AM168067) Dictyostelium septentrionalis 18S rRNA gene, isol... 1181 0.0 1
(BJ420447) Dictyostelium discoideum cDNA clone:ddv39g12, 5' ... 1179 0.0 1
(BJ390110) Dictyostelium discoideum cDNA clone:dds21o04, 5' ... 1179 0.0 1
(BJ336697) Dictyostelium discoideum cDNA clone:dda54g19, 5' ... 1178 0.0 1
(AM168066) Dictyostelium septentrionalis 18S rRNA gene, isol... 1174 0.0 1
(BJ335992) Dictyostelium discoideum cDNA clone:dda52g07, 5' ... 1172 0.0 1
(AM168061) Dictyostelium purpureum 18S rRNA gene, isolate WS... 1170 0.0 5
(BJ418477) Dictyostelium discoideum cDNA clone:ddv32k21, 5' ... 1170 0.0 1
(BJ330603) Dictyostelium discoideum cDNA clone:dda32k01, 5' ... 1170 0.0 1
(BJ339159) Dictyostelium discoideum cDNA clone:dda64j07, 5' ... 1168 0.0 1
(BJ391896) Dictyostelium discoideum cDNA clone:dds25i16, 5' ... 1160 0.0 1
(BJ395526) Dictyostelium discoideum cDNA clone:dds39n06, 5' ... 1152 0.0 1
(BJ367136) Dictyostelium discoideum cDNA clone:ddc41c17, 5' ... 1150 0.0 1
(AU271735) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 1148 0.0 1
(BJ421110) Dictyostelium discoideum cDNA clone:ddv41a24, 5' ... 1136 0.0 1
(BJ417610) Dictyostelium discoideum cDNA clone:ddv28n02, 5' ... 1132 0.0 1
(AU271734) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 1128 0.0 1
(BJ390246) Dictyostelium discoideum cDNA clone:dds21o15, 5' ... 1122 0.0 2
(BJ424065) Dictyostelium discoideum cDNA clone:ddv51d09, 5' ... 1120 0.0 1
(BJ423790) Dictyostelium discoideum cDNA clone:ddv50m12, 5' ... 1116 0.0 1
(BJ421651) Dictyostelium discoideum cDNA clone:ddv43k10, 5' ... 1116 0.0 2
(BJ420580) Dictyostelium discoideum cDNA clone:ddv39b21, 5' ... 1116 0.0 2
(BJ413027) Dictyostelium discoideum cDNA clone:ddv13k24, 5' ... 1116 0.0 2
(AY040330) Dictyostelium firmibasis 18S ribosomal RNA gene, ... 1110 0.0 7
(BJ424673) Dictyostelium discoideum cDNA clone:ddv53n04, 5' ... 1104 0.0 1
(BJ334337) Dictyostelium discoideum cDNA clone:dda45p24, 5' ... 1100 0.0 2
(BJ412875) Dictyostelium discoideum cDNA clone:ddv13p01, 5' ... 1082 0.0 1
(BJ335584) Dictyostelium discoideum cDNA clone:dda50g21, 5' ... 1072 0.0 2
(AY040336) Dictyostelium sphaerocephalum 18S ribosomal RNA g... 1066 0.0 11
(AY040329) Dictyostelium dimigraformum 18S ribosomal RNA gen... 1061 0.0 7
(FJ424861) Dictyostelium purpureum strain QSpu31 17S ribosom... 1015 0.0 6
(FJ424832) Dictyostelium purpureum strain QSpu23 17S ribosom... 1009 0.0 6
(FJ424829) Dictyostelium purpureum strain QSpu1 17S ribosoma... 1009 0.0 6
(AY185331) Dictyostelium discoideum eukaryotic release facto... 1005 0.0 2
(BJ361371) Dictyostelium discoideum cDNA clone:ddc16m20, 5' ... 1005 0.0 2
(BJ328821) Dictyostelium discoideum cDNA clone:dda29m15, 5' ... 1005 0.0 2
(BJ325795) Dictyostelium discoideum cDNA clone:dda2f11, 5' e... 1005 0.0 2
(BJ389803) Dictyostelium discoideum cDNA clone:dds20j06, 5' ... 1001 0.0 2
(BJ326775) Dictyostelium discoideum cDNA clone:dda18a01, 5' ... 999 0.0 2
(BJ412355) Dictyostelium discoideum cDNA clone:ddv8h03, 5' e... 997 0.0 2
(AM168046) Dictyostelium laterosorum 18S rRNA gene, isolate ... 993 0.0 3
(BJ325798) Dictyostelium discoideum cDNA clone:dda2g11, 5' e... 989 0.0 2
(AY040340) Polysphondylium violaceum 18S ribosomal RNA gene,... 985 0.0 3
(AM168108) Polysphondylium violaceum 18S rRNA gene, isolate P6. 985 0.0 3
(FJ424830) Dictyostelium purpureum strain QSpu6 17S ribosoma... 981 0.0 10
(AU284808) Dictyostelium discoideum gamete cDNA clone:FC-BL1... 979 0.0 3
(FJ424833) Dictyostelium purpureum strain QSpu33 17S ribosom... 977 0.0 10
(BJ330521) Dictyostelium discoideum cDNA clone:dda31h19, 5' ... 973 0.0 2
(BJ323416) Dictyostelium discoideum cDNA clone:dda10b16, 5' ... 973 0.0 2
(BJ410435) Dictyostelium discoideum cDNA clone:ddv12d17, 5' ... 967 0.0 2
(FJ424857) Dictyostelium purpureum strain QSpu32 17S ribosom... 952 0.0 10
(BJ423187) Dictyostelium discoideum cDNA clone:ddv48h12, 5' ... 952 0.0 2
(FJ424838) Dictyostelium purpureum strain QSpu30 17S ribosom... 948 0.0 11
(BJ415831) Dictyostelium discoideum cDNA clone:ddv23k22, 5' ... 932 0.0 2
(BJ333974) Dictyostelium discoideum cDNA clone:dda44n15, 5' ... 928 0.0 2
(BJ425666) Dictyostelium discoideum cDNA clone:ddv56o10, 5' ... 926 0.0 2
(FJ424834) Dictyostelium purpureum strain QSpu29 17S ribosom... 920 0.0 10
(AM168073) Dictyostelium sp. menorah 18S rRNA gene, isolate M1. 910 0.0 11
(BJ326067) Dictyostelium discoideum cDNA clone:dda3n15, 5' e... 910 0.0 2
(BJ326136) Dictyostelium discoideum cDNA clone:dda15j12, 5' ... 908 0.0 2
(BJ328845) Dictyostelium discoideum cDNA clone:dda29c19, 5' ... 904 0.0 2
(BJ420898) Dictyostelium discoideum cDNA clone:ddv40e20, 5' ... 902 0.0 4
(AM168045) Dictyostelium lacteum 18S rRNA gene. 898 0.0 11
(AM168078) Dictyostelium gracile 18S rRNA gene, isolate TNS-... 892 0.0 13
(AM168075) Dictyostelium tenue 18S rRNA gene, isolate PR4. 890 0.0 14
(AM168063) Dictyostelium rhizopodium 18S rRNA gene, isolate ... 888 0.0 12
(AM168036) Dictyostelium coeruleo-stipes 18S rRNA gene, isol... 888 0.0 12
(AY040332) Dictyostelium minutum 18S ribosomal RNA gene, par... 884 0.0 13
(AM168076) Dictyostelium tenue 18S rRNA gene, isolate Pan52. 884 0.0 13
(AM168052) Dictyostelium monochasioides 18S rRNA gene, isola... 884 0.0 12
(AM168051) Dictyostelium minutum 18S rRNA gene, isolate 71-2. 884 0.0 10
(EU672875) Dictyostelium sp. MR-2008 18S ribosomal RNA gene,... 882 0.0 13
(AM168094) Dictyostelium tenue 18S rRNA gene, isolate PJ6. 882 0.0 12
(AM168029) Dictyostelium australe 18S rRNA gene, isolate NZ80B. 876 0.0 13
(AM168069) Dictyostelium potamoides 18S rRNA gene, isolate F... 874 0.0 11
(AM168062) Dictyostelium vinaceo-fuscum 18S rRNA gene, isola... 872 0.0 12
(AM168047) Dictyostelium lavandulum 18S rRNA gene, isolate B15. 872 0.0 12
(BJ412920) Dictyostelium discoideum cDNA clone:ddv13k11, 5' ... 852 0.0 2
(AU284817) Dictyostelium discoideum gamete cDNA clone:FC-BL2... 848 0.0 2
(AU284807) Dictyostelium discoideum gamete cDNA clone:FC-BL1... 844 0.0 2
(FJ424837) Dictyostelium purpureum strain QSpu26 17S ribosom... 837 0.0 10
(BJ424955) Dictyostelium discoideum cDNA clone:ddv54l04, 5' ... 829 0.0 2
(BJ400215) Dictyostelium discoideum cDNA clone:dds9c11, 3' e... 793 0.0 2
(AM168048) Dictyostelium longosporum 18S rRNA gene, isolate ... 779 0.0 9
(BJ435973) Dictyostelium discoideum cDNA clone:ddv29o04, 3' ... 731 0.0 2
(BJ431360) Dictyostelium discoideum cDNA clone:ddv13k24, 3' ... 724 0.0 2
(AM168060) Dictyostelium purpureum 18S rRNA gene, isolate C143. 714 0.0 4
(BJ389944) Dictyostelium discoideum cDNA clone:dds20k14, 5' ... 712 0.0 4
(BJ356426) Dictyostelium discoideum cDNA clone:dda60c12, 3' ... 706 0.0 2
(BJ431243) Dictyostelium discoideum cDNA clone:ddv13k11, 3' ... 666 0.0 2
(BJ437004) Dictyostelium discoideum cDNA clone:ddv32k21, 3' ... 664 0.0 2
(AU284274) Dictyostelium discoideum gamete cDNA clone:FC-AG2... 652 0.0 2
(BJ442893) Dictyostelium discoideum cDNA clone:ddv51d09, 3' ... 652 0.0 2
(BJ442608) Dictyostelium discoideum cDNA clone:ddv50m12, 3' ... 652 0.0 3
(BJ439066) Dictyostelium discoideum cDNA clone:ddv39g12, 3' ... 652 0.0 2
(BJ435336) Dictyostelium discoideum cDNA clone:ddv26f24, 3' ... 652 0.0 2
(BJ435225) Dictyostelium discoideum cDNA clone:ddv26a15, 3' ... 652 0.0 2
(BJ430824) Dictyostelium discoideum cDNA clone:ddv8n23, 3' e... 652 0.0 2
(BJ411876) Dictyostelium discoideum cDNA clone:ddv6l06, 5' e... 652 0.0 2
(BJ354808) Dictyostelium discoideum cDNA clone:dda54g19, 3' ... 652 0.0 2
(BJ354039) Dictyostelium discoideum cDNA clone:dda52g07, 3' ... 652 0.0 3
(AM168053) Dictyostelium mucoroides 18S rRNA gene, isolate T... 650 0.0 3
(BJ327413) Dictyostelium discoideum cDNA clone:dda20h11, 5' ... 646 0.0 2
(BJ424037) Dictyostelium discoideum cDNA clone:ddv51o02, 5' ... 642 0.0 2
(BJ331963) Dictyostelium discoideum cDNA clone:dda37a21, 5' ... 620 0.0 2
(BJ415058) Dictyostelium discoideum cDNA clone:ddv21e09, 5' ... 618 0.0 2
(BJ420522) Dictyostelium discoideum cDNA clone:ddv39g14, 5' ... 611 0.0 3
(AU272100) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 599 0.0 2
(AU271812) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 599 0.0 2
(BJ358514) Dictyostelium discoideum cDNA clone:ddc1m20, 5' e... 589 0.0 2
(DQ340387) Dictyostelium polycephalum 17S ribosomal RNA, 5.8... 533 0.0 14
(AM168056) Dictyostelium polycephalum 18S rRNA gene, isolate... 533 0.0 13
(BJ443359) Dictyostelium discoideum cDNA clone:ddv52n14, 3' ... 529 0.0 3
(AY040338) Polysphondylium pallidum 18S ribosomal RNA gene, ... 488 0.0 13
(AM168106) Polysphondylium tikaliensis 18S rRNA gene, isolat... 488 0.0 13
(AM168103) Polysphondylium pallidum 18S rRNA gene, isolate T... 488 0.0 13
(AM168102) Polysphondylium sp. arachnoideum 18S rRNA gene, i... 488 0.0 13
(AM168099) Polysphondylium equisetoides 18S rRNA gene, isola... 488 0.0 13
(AM168098) Polysphondylium colligatum 18S rRNA gene, isolate... 488 0.0 14
(AY040334) Dictyostelium polycephalum 18S ribosomal RNA gene... 484 0.0 14
(AM168112) Acytostelium ellipticum 18S rRNA gene, isolate AE2. 480 0.0 12
(AM168077) Dictyostelium caveatum 18S rRNA gene, isolate WS695. 476 0.0 11
(AM168100) Polysphondylium filamentosum 18S rRNA gene, isola... 474 0.0 13
(EU004605) Polysphondylium pallidum strain PPHU8 small subun... 472 0.0 13
(DQ340388) Polysphondylium pallidum 17S ribosomal RNA, 5.8S ... 472 0.0 13
(AY040339) Polysphondylium tenuissimum 18S ribosomal RNA gen... 472 0.0 16
(AY040337) Polysphondylium candidum 18S ribosomal RNA gene, ... 472 0.0 15
(AM168105) Polysphondylium tenuissimum 18S rRNA gene, isolat... 472 0.0 13
(AM168101) Polysphondylium luridum 18S rRNA gene, isolate LR-2. 472 0.0 13
(AM168097) Polysphondylium asymetricum 18S rRNA gene, isolat... 472 0.0 13
(AM168074) Dictyostelium gloeosporum 18S rRNA gene, isolate ... 472 0.0 14
(BJ443522) Dictyostelium discoideum cDNA clone:ddv53n04, 3' ... 466 0.0 4
(AM168107) Polysphondylium pseudocandidum 18S rRNA gene, iso... 464 0.0 13
(AM168104) Polysphondylium pallidum 18S rRNA gene, isolate P... 464 0.0 13
(AM168096) Polysphondylium anisocaule 18S rRNA gene, isolate... 464 0.0 13
(AM168110) Acytostelium subglobosum 18S rRNA gene, isolate LB1. 462 0.0 15
(AM168115) Acytostelium anastomosans 18S rRNA gene, isolate ... 460 0.0 13
(AM168111) Acytostelium leptosomum 18S rRNA gene, isolate FG12. 460 0.0 13
(AM168109) Acytostelium longisorophorum 18S rRNA gene, isola... 460 0.0 14
(AM168057) Dictyostelium polycarpum 18S rRNA gene, isolate V... 460 0.0 13
(AM168113) Acytostelium serpentarium 18S rRNA gene, isolate ... 456 0.0 13
(AM168079) Dictyostelium oculare 18S rRNA gene, isolate DB4B. 456 0.0 12
(AM168058) Dictyostelium polycarpum 18S rRNA gene, isolate O... 452 0.0 13
(AM168114) Acytostelium digitatum 18S rRNA gene, isolate OH517. 446 0.0 14
(BJ444463) Dictyostelium discoideum cDNA clone:ddv56o10, 3' ... 444 0.0 5
(AM168084) Dictyostelium bifurcatum 18S rRNA gene, isolate UK5. 400 0.0 15
(AM168095) Dictyostelium aureostipes var. helvetium 18S rRNA... 392 0.0 14
(AM168089) Dictyostelium mexicanum 18S rRNA gene, isolate Me... 392 0.0 14
(AM168088) Dictyostelium medusoides 18S rRNA gene, isolate O... 392 0.0 15
(AM168081) Dictyostelium sp. stellarum 18S rRNA gene, isolat... 392 0.0 14
(AM168072) Dictyostelium granulophorum 18S rRNA gene, isolat... 392 0.0 15
(DQ340389) Dictyostelium fasciculatum 17S ribosomal RNA, 5.8... 385 0.0 14
(AY040328) Dictyostelium aureostipes 18S ribosomal RNA gene,... 385 0.0 15
(AM168093) Dictyostelium delicatum 18S rRNA gene, isolate TN... 385 0.0 14
(AM168087) Dictyostelium fasciculatum 18S rRNA gene, isolate... 385 0.0 14
(AM168083) Dictyostelium aureostipes 18S rRNA gene, isolate ... 385 0.0 14
(AM168082) Dictyostelium aureostipes 18S rRNA gene, isolate ... 385 0.0 15
(AM168080) Dictyostelium sp. antarticum 18S rRNA gene, isola... 385 0.0 14
(AM168092) Dictyostelium deminutivum 18S rRNA gene, isolate ... 381 0.0 14
(AM168091) Dictyostelium parvisporum 18S rRNA gene, isolate ... 375 0.0 15
(AM168090) Dictyostelium microsporum 18S rRNA gene, isolate ... 371 0.0 15
(AM168085) Dictyostelium exiguum 18S rRNA gene, isolate TNS-... 363 0.0 15
(U07416) Acanthamoeba castellanii Neff ATCC 50373 18S rRNA g... 262 0.0 17
(U07415) Acanthamoeba polyphaga JAC/S2 ATCC 50372 18S rRNA g... 262 0.0 17
(U07414) Acanthamoeba castellanii Ma ATCC 50370 18S rRNA gene. 262 0.0 17
(U07413) Acanthamoeba castellanii Castellani ATCC 50374 18S ... 262 0.0 17
(U07411) Acanthamoeba palestinensis Reich ATCC 30870 18S rRN... 262 0.0 17
(U07410) Acanthamoeba sp. ATCC 50497 18S ribosomal RNA gene,... 262 0.0 18
(U07409) Acanthamoeba sp. ATCC 50369 18S ribosomal RNA gene,... 262 0.0 17
(U07408) Acanthamoeba sp. ATCC 50496 18S ribosomal RNA gene,... 262 0.0 17
(U07407) Acanthamoeba polyphaga BCM:0173:16 ATCC 50371 18S r... 262 0.0 17
(U07406) Acanthamoeba rhysodes BCM:0685:116 ATCC 50368 18S r... 262 0.0 17
(U07404) Acanthamoeba sp. ATCC 50498 18S ribosomal RNA gene,... 262 0.0 17
(U07403) Acanthamoeba castellanii CDC:0786:V042 18S rRNA gene. 262 0.0 17
(U07402) Acanthamoeba polyphaga CDC:0884:V029 18S rRNA gene. 262 0.0 17
(U07400) Acanthamoeba castellanii CDC:0981:V006 18S rRNA gene. 262 0.0 17
(M13435) A.castellanii mature small subunit rRNA gene, compl... 262 0.0 17
(L09599) Acanthamoeba palestinensis small subunit ribosomal ... 262 0.0 17
(EF140638) Acanthamoeba sp. KA/E22 18S ribosomal RNA gene, c... 262 0.0 17
(EF140629) Acanthamoeba sp. KA/E28 18S ribosomal RNA gene, c... 262 0.0 17
(EF140628) Acanthamoeba sp. KA/E27 18S ribosomal RNA gene, c... 262 0.0 17
(EF140627) Acanthamoeba sp. KA/E26 18S ribosomal RNA gene, c... 262 0.0 17
(EF140625) Acanthamoeba sp. KA/E23 18S ribosomal RNA gene, c... 262 0.0 17
(DQ992193) Acanthamoeba sp. EFW9 18S ribosomal RNA gene, par... 262 0.0 17
(DQ992190) Acanthamoeba sp. EFW16 18S ribosomal RNA gene, pa... 262 0.0 17
(AY173011) Acanthamoeba sp. KA/MSG27 18S ribosomal RNA gene,... 262 0.0 17
(AY173010) Acanthamoeba sp. KA/MSG26 18S ribosomal RNA gene,... 262 0.0 17
(AY173009) Acanthamoeba sp. KA/MSG18 18S ribosomal RNA gene,... 262 0.0 18
(AY173008) Acanthamoeba sp. KA/MSG16 18S ribosomal RNA gene,... 262 0.0 17
(AY173007) Acanthamoeba sp. KA/MSG15 18S ribosomal RNA gene,... 262 0.0 17
(AY173005) Acanthamoeba sp. KA/MSG10 18S ribosomal RNA gene,... 262 0.0 17
(AY173004) Acanthamoeba sp. KA/MSG4 18S ribosomal RNA gene, ... 262 0.0 17
(AY173002) Acanthamoeba sp. KA/MSG1 18S ribosomal RNA gene, ... 262 0.0 17
(AY173001) Acanthamoeba sp. KA/MSS8-2 18S ribosomal RNA gene... 262 0.0 17
(AY148964) Acanthamoeba sp. KA/E18 18S ribosomal RNA gene, c... 262 0.0 16
(AY148958) Acanthamoeba sp. KA/E11 18S ribosomal RNA gene, c... 262 0.0 17
(AY148957) Acanthamoeba sp. KA/E10 18S ribosomal RNA gene, c... 262 0.0 17
(AY148956) Acanthamoeba sp. KA/E8 18S ribosomal RNA gene, co... 262 0.0 17
(AM408802) Acanthamoeba sp. EIDS3 partial 18S rRNA gene. 262 0.0 16
(AF333609) Acanthamoeba sp. PN13 small subunit ribosomal RNA... 262 0.0 17
(AF333607) Acanthamoeba sp. PN15 small subunit ribosomal RNA... 262 0.0 16
(AF114438) Acanthamoeba castellanii 18S ribosomal RNA gene, ... 262 0.0 17
(AY148960) Acanthamoeba sp. KA/E14 18S ribosomal RNA gene, c... 258 0.0 17
(AY033896) Comandonia operculata small subunit ribosomal RNA... 258 0.0 17
(AY172999) Acanthamoeba sp. KA/MSS1 18S ribosomal RNA gene, ... 254 0.0 17
(AF349044) Acanthamoeba sp. KA/E6 18S ribosomal RNA gene, co... 254 0.0 17
(AF316545) Acanthamoeba sp. KA/E12 18S ribosomal RNA gene, c... 254 0.0 17
(EF025003) Uncultured eukaryote clone Elev_18S_4931 18S ribo... 254 0.0 17
(EF024050) Eimeriidae environmental sample clone Amb_18S_153... 254 0.0 17
(EF024024) Eimeriidae environmental sample clone Amb_18S_150... 254 0.0 17
(EF024019) Eimeriidae environmental sample clone Amb_18S_149... 254 0.0 17
(EF024000) Eimeriidae environmental sample clone Amb_18S_147... 254 0.0 17
(EF023967) Eimeriidae environmental sample clone Amb_18S_143... 254 0.0 17
(EF023935) Phaseoleae environmental sample clone Amb_18S_139... 254 0.0 17
(EF023842) Phaseoleae environmental sample clone Amb_18S_129... 254 0.0 17
(EF023775) Phaseoleae environmental sample clone Amb_18S_121... 254 0.0 17
(EF023767) Phaseoleae environmental sample clone Amb_18S_120... 254 0.0 17
(EF023700) Uncultured Closteriaceae clone Amb_18S_970 18S ri... 254 0.0 17
(EF023392) Phaseoleae environmental sample clone Amb_18S_727... 254 0.0 17
(EF023355) Phaseoleae environmental sample clone Amb_18S_681... 254 0.0 17
(EF023270) Eimeriidae environmental sample clone Amb_18S_576... 254 0.0 17
(EF023252) Uncultured Desmidiaceae clone Amb_18S_556 18S rib... 254 0.0 17
(EF023246) Eimeriidae environmental sample clone Amb_18S_548... 254 0.0 17
(AY173000) Acanthamoeba sp. KA/MSS8-1 18S ribosomal RNA gene... 226 0.0 18
(AF316547) Acanthamoeba triangularis 18S ribosomal RNA gene,... 178 0.0 18
(BJ390291) Dictyostelium discoideum cDNA clone:dds21k24, 5' ... 876 0.0 3
(BJ325057) Dictyostelium discoideum cDNA clone:dda9p11, 5' e... 910 0.0 2
(BJ326477) Dictyostelium discoideum cDNA clone:dda16j15, 5' ... 908 0.0 2
(BJ425119) Dictyostelium discoideum cDNA clone:ddv54o15, 5' ... 799 0.0 2
(BJ436153) Dictyostelium discoideum cDNA clone:ddv30l03, 3' ... 476 0.0 3
(BJ412534) Dictyostelium discoideum cDNA clone:ddv8n23, 5' e... 896 0.0 2
(BJ417037) Dictyostelium discoideum cDNA clone:ddv29o04, 5' ... 1068 0.0 1
(BJ373201) Dictyostelium discoideum cDNA clone:ddc1m20, 3' e... 478 0.0 4
(AF005995) Acanthamoeba lugdunensis 18S ribosomal RNA gene, ... 262 0.0 18
(DQ992192) Acanthamoeba sp. EFW7 18S ribosomal RNA gene, par... 135 0.0 18
(AY148961) Acanthamoeba sp. KA/E15 18S ribosomal RNA gene, c... 242 0.0 17
(AU271566) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 716 0.0 3
(U07405) Acanthamoeba castellanii CDC:0180:1 18S rRNA gene. 256 0.0 17
(AM408800) Acanthamoeba sp. EI5 partial 18S rRNA gene. 262 0.0 17
(EF023186) Caprifoliaceae environmental sample clone Amb_18S... 246 0.0 17
(EF024906) Phaseoleae environmental sample clone Elev_18S_14... 238 0.0 17
(EF024889) Phaseoleae environmental sample clone Elev_18S_14... 238 0.0 17
(EF024757) Phaseoleae environmental sample clone Elev_18S_12... 238 0.0 17
(EF024482) Phaseoleae environmental sample clone Elev_18S_77... 238 0.0 17
(AY173015) Acanthamoeba sp. KA/MSS7 18S ribosomal RNA gene, ... 262 0.0 17
(DQ992189) Acanthamoeba sp. EFW15 18S ribosomal RNA gene, pa... 262 0.0 18
(DQ992188) Acanthamoeba sp. EFW12 18S ribosomal RNA gene, pa... 262 0.0 18
(DQ992187) Acanthamoeba sp. EFW11 18S ribosomal RNA gene, pa... 262 0.0 18
(DQ992186) Acanthamoeba sp. EFW3 18S ribosomal RNA gene, par... 262 0.0 18
(EF025035) Uncultured eukaryote clone Elev_18S_7101 18S ribo... 254 0.0 17
(AF333608) Acanthamoeba sp. PN14 small subunit ribosomal RNA... 262 0.0 17
(BJ358402) Dictyostelium discoideum cDNA clone:ddc1k09, 5' e... 1055 0.0 1
(AY173003) Acanthamoeba sp. KA/MSG3 18S ribosomal RNA gene, ... 137 0.0 19
(BJ323870) Dictyostelium discoideum cDNA clone:dda12l18, 5' ... 846 0.0 2
(BJ431197) Dictyostelium discoideum cDNA clone:ddv13p01, 3' ... 630 0.0 2
(EF024637) Phaseoleae environmental sample clone Elev_18S_95... 254 0.0 17
(EF024412) Phaseoleae environmental sample clone Elev_18S_10... 254 0.0 17
(EF024405) Phaseoleae environmental sample clone Elev_18S_10... 254 0.0 17
(AY148963) Acanthamoeba sp. KA/E17 18S ribosomal RNA gene, c... 262 0.0 18
(BJ362330) Dictyostelium discoideum cDNA clone:ddc21h07, 5' ... 844 0.0 2
(BJ328777) Dictyostelium discoideum cDNA clone:dda29p08, 5' ... 844 0.0 2
(EF140626) Acanthamoeba sp. KA/E25 18S ribosomal RNA gene, c... 262 0.0 17
(AF005998) Acanthamoeba sp. KA/E2 18S ribosomal RNA gene, co... 262 0.0 17
(AY148959) Acanthamoeba sp. KA/E13 18S ribosomal RNA gene, c... 254 0.0 18
(BJ390260) Dictyostelium discoideum cDNA clone:dds21b23, 5' ... 842 0.0 2
(U07417) Acanthamoeba royreba Oak Ridge ATCC 30884 18S rRNA ... 262 0.0 17
(AM408801) Acanthamoeba sp. EI6 partial 18S rRNA gene. 250 0.0 17
(EF023229) Eimeriidae environmental sample clone Amb_18S_530... 254 0.0 17
(EF140639) Acanthamoeba sp. KA/E24 18S ribosomal RNA gene, c... 254 0.0 17
(AY148955) Acanthamoeba sp. KA/E7 18S ribosomal RNA gene, co... 262 0.0 18
(BJ420278) Dictyostelium discoideum cDNA clone:ddv38e21, 5' ... 1045 0.0 1
(BJ327545) Dictyostelium discoideum cDNA clone:dda20g21, 5' ... 846 0.0 2
(AY148962) Acanthamoeba sp. KA/E16 18S ribosomal RNA gene, c... 232 0.0 17
(EF023113) Nucleariidae environmental sample clone Amb_18S_3... 254 0.0 17
(EF023386) Eimeriidae environmental sample clone Amb_18S_721... 254 0.0 17
(EF024062) Uncultured eukaryote clone Amb_18S_4821 18S ribos... 238 0.0 17
(EF024956) Phaseoleae environmental sample clone Elev_18S_14... 238 0.0 17
(EF024089) Uncultured eukaryote clone Amb_18S_6741 18S ribos... 238 0.0 17
(AM408799) Acanthamoeba sp. EI4 partial 18S rRNA gene. 226 0.0 18
(EF023223) Eimeriidae environmental sample clone Amb_18S_522... 254 0.0 17
(EF024478) Phaseoleae environmental sample clone Elev_18S_77... 238 0.0 17
(BJ421559) Dictyostelium discoideum cDNA clone:ddv43g06, 5' ... 837 0.0 2
(BJ412443) Dictyostelium discoideum cDNA clone:ddv8a15, 5' e... 837 0.0 2
(BJ412285) Dictyostelium discoideum cDNA clone:ddv7p14, 5' e... 837 0.0 2
(BJ410284) Dictyostelium discoideum cDNA clone:ddv11m24, 5' ... 837 0.0 2
(BJ323732) Dictyostelium discoideum cDNA clone:dda12b01, 5' ... 837 0.0 2
(BJ412930) Dictyostelium discoideum cDNA clone:ddv13p08, 5' ... 837 0.0 2
(AY173012) Acanthamoeba sp. KA/MSG29 18S ribosomal RNA gene,... 262 0.0 17
(EF023210) Nucleariidae environmental sample clone Amb_18S_5... 254 0.0 17
(EF023564) Eimeriidae environmental sample clone Amb_18S_786... 246 0.0 17
(BJ420282) Dictyostelium discoideum cDNA clone:ddv38f19, 5' ... 835 0.0 2
(BJ413076) Dictyostelium discoideum cDNA clone:ddv14h06, 5' ... 835 0.0 2
(BJ427673) Dictyostelium discoideum cDNA clone:ddv63p02, 5' ... 835 0.0 2
(EF023285) Eimeriidae environmental sample clone Amb_18S_595... 254 0.0 17
(EF024971) Eimeriidae environmental sample clone Elev_18S_15... 220 0.0 16
(S81337) 18S rRNA [Acanthamoeba griffini, H37, Genomic, 2781... 262 0.0 17
(U07412) Acanthamoeba griffini S-7 ATCC 30731 18S rRNA gene. 262 0.0 17
(EU349230) Apusomonadidae sp. micra strain Millport 18S ribo... 234 0.0 15
(BJ330179) Dictyostelium discoideum cDNA clone:dda27k16, 5' ... 833 0.0 2
(EF024952) Eimeriidae environmental sample clone Elev_18S_14... 246 0.0 17
(EF023571) Aristolochiaceae environmental sample clone Amb_1... 230 0.0 17
(BJ419319) Dictyostelium discoideum cDNA clone:ddv35a21, 5' ... 537 0.0 2
(AY176047) Acanthamoeba sp. KA/MSG23 18S ribosomal RNA gene,... 236 0.0 19
(EF024885) Eimeriidae environmental sample clone Elev_18S_14... 238 0.0 16
(BJ326859) Dictyostelium discoideum cDNA clone:dda18e07, 5' ... 839 0.0 2
(AM408796) Acanthamoeba sp. EI1 partial 18S rRNA gene. 254 0.0 16
(EF023601) Eimeriidae environmental sample clone Amb_18S_837... 246 0.0 17
(EF024784) Eimeriidae environmental sample clone Elev_18S_12... 270 0.0 16
(EF024313) Nucleariidae environmental sample clone Elev_18S_... 270 0.0 16
(EF024574) Tofieldiaceae environmental sample clone Elev_18S... 238 0.0 16
(EF024222) Phaseoleae environmental sample clone Elev_18S_57... 238 0.0 16
(EF024059) Uncultured eukaryote clone Amb_18S_4341 18S ribos... 238 0.0 16
(BJ362829) Dictyostelium discoideum cDNA clone:ddc23m18, 5' ... 835 0.0 2
(EF023160) Uncultured Sarcosomataceae clone Amb_18S_450 18S ... 254 0.0 17
(EF023979) Eimeriidae environmental sample clone Amb_18S_145... 246 0.0 17
(EF023973) Eimeriidae environmental sample clone Amb_18S_144... 246 0.0 17
(EF023607) Eimeriidae environmental sample clone Amb_18S_845... 246 0.0 17
(EF023476) Eimeriidae environmental sample clone Amb_18S_106... 246 0.0 17
(EF023384) Eimeriidae environmental sample clone Amb_18S_719... 246 0.0 17
(EF023929) Eimeriidae environmental sample clone Amb_18S_138... 246 0.0 17
(EF024959) Tofieldiaceae environmental sample clone Elev_18S... 238 0.0 16
(BJ348085) Dictyostelium discoideum cDNA clone:dda32k01, 3' ... 644 0.0 2
(EF023944) Phaseoleae environmental sample clone Amb_18S_140... 240 0.0 16
(EF023942) Phaseoleae environmental sample clone Amb_18S_140... 240 0.0 16
(EF023932) Phaseoleae environmental sample clone Amb_18S_139... 240 0.0 16
(EF023926) Phaseoleae environmental sample clone Amb_18S_138... 240 0.0 16
(EF023897) Phaseoleae environmental sample clone Amb_18S_135... 240 0.0 16
(EF023891) Phaseoleae environmental sample clone Amb_18S_134... 240 0.0 16
(EF023797) Phaseoleae environmental sample clone Amb_18S_124... 240 0.0 16
(EF023681) Phaseoleae environmental sample clone Amb_18S_942... 240 0.0 16
(EF023674) Phaseoleae environmental sample clone Amb_18S_934... 240 0.0 16
(EF023172) Phaseoleae environmental sample clone Amb_18S_463... 240 0.0 16
(EF023167) Eimeriidae environmental sample clone Amb_18S_457... 234 0.0 16
(EF024843) Eimeriidae environmental sample clone Elev_18S_13... 246 0.0 17
(EF024835) Eimeriidae environmental sample clone Elev_18S_13... 246 0.0 17
(X54866) S. pombe mRNA for 16S-like ribosomal RNA. 234 0.0 16
(EF024037) Eimeriidae environmental sample clone Amb_18S_151... 234 0.0 16
(EF023893) Eimeriidae environmental sample clone Amb_18S_134... 234 0.0 16
(EF023744) Eimeriidae environmental sample clone Amb_18S_118... 234 0.0 16
(EF023662) Eimeriidae environmental sample clone Amb_18S_916... 234 0.0 16
(EF023618) Eimeriidae environmental sample clone Amb_18S_860... 234 0.0 16
(EF023496) Eimeriidae environmental sample clone Amb_18S_108... 234 0.0 16
(EF023195) Eimeriidae environmental sample clone Amb_18S_488... 234 0.0 16
(EF023187) Acanthamoeba environmental sample clone Amb_18S_4... 234 0.0 16
(EF023146) Acanthamoeba environmental sample clone Amb_18S_4... 234 0.0 16
(AF368504) Basidiobolus haptosporus small subunit ribosomal ... 230 0.0 16
(BJ329903) Dictyostelium discoideum cDNA clone:dda26n16, 5' ... 837 0.0 2
(Y19155) Amoebidium parasiticum 18S rRNA gene, strain ATCC 3... 222 0.0 19
(EF023583) Uncultured Sarcosomataceae clone Amb_18S_810 18S ... 254 0.0 17
(X70803) G.nostochinearum gene for 16S-like ribosomal RNA. 198 0.0 19
(BJ329370) Dictyostelium discoideum cDNA clone:dda24a23, 5' ... 720 0.0 3
(AY251633) Schizosaccharomyces pombe isolate DR2 18S ribosom... 238 0.0 15
(EF140633) Acanthamoeba sp. KA/E21 18S ribosomal RNA gene, c... 262 0.0 18
(EF023144) Phaseoleae environmental sample clone Amb_18S_432... 240 0.0 16
(AU270027) Dictyostelium discoideum vegetative cDNA clone:VS... 1027 0.0 1
(AY148954) Acanthamoeba sp. KA/E5 18S ribosomal RNA gene, co... 262 0.0 17
(EF024480) Eimeriidae environmental sample clone Elev_18S_77... 246 0.0 17
(EF023558) Eimeriidae environmental sample clone Amb_18S_778... 246 0.0 17
(EF023617) Aristolochiaceae environmental sample clone Amb_1... 230 0.0 17
(EF023497) Aristolochiaceae environmental sample clone Amb_1... 230 0.0 17
(EF023125) Phytolaccaceae environmental sample clone Amb_18S... 230 0.0 17
(AF019069) Acanthamoeba stevensoni RB:F:1 18S ribosomal RNA ... 262 0.0 17
(AM168086) Dictyostelium fasciculatum 18S rRNA gene, isolate... 188 0.0 18
(AF019068) Acanthamoeba hatchetti BH-2 18S ribosomal RNA gen... 262 0.0 17
(AF285277) Acanthamoeba sp. KO99 18S small subunit ribosomal... 270 0.0 17
(DQ185605) Acanthamoeba sp. PJ small subunit ribosomal RNA g... 262 0.0 18
(EF024034) Phaseoleae environmental sample clone Amb_18S_151... 240 0.0 16
(BJ323454) Dictyostelium discoideum cDNA clone:dda10l15, 5' ... 819 0.0 2
(DQ244031) Uncultured marine alveolate clone PAF8AU2004 18S ... 208 0.0 16
(EF023203) Eimeriidae environmental sample clone Amb_18S_498... 254 0.0 18
(Y16013) Moerckia flotoviana 18S rRNA gene. 232 0.0 16
(EF023142) Eimeriidae environmental sample clone Amb_18S_430... 236 0.0 17
(BJ326158) Dictyostelium discoideum cDNA clone:dda15b15, 5' ... 837 0.0 2
(BJ362529) Dictyostelium discoideum cDNA clone:ddc22d09, 5' ... 817 0.0 2
(BJ328503) Dictyostelium discoideum cDNA clone:dda28m12, 5' ... 817 0.0 2
(BJ323456) Dictyostelium discoideum cDNA clone:dda10m13, 5' ... 817 0.0 2
(BJ323438) Dictyostelium discoideum cDNA clone:dda10h16, 5' ... 817 0.0 2
(AY050182) Amastigomonas mutabilis 18S ribosomal RNA gene, p... 218 0.0 17
(DQ992184) Acanthamoeba sp. EFW2 18S ribosomal RNA gene, par... 262 0.0 17
(AF100946) Mycale fibrexilis 18S ribosomal RNA gene, complet... 234 0.0 19
(EF205325) Acanthamoeba sp. ACLCCOF-001 18S ribosomal RNA ge... 262 0.0 17
(AF260723) Acanthamoeba hatchetti strain 3ST 18S small subun... 262 0.0 17
(AF260721) Acanthamoeba castellanii strain 1BU 18S small sub... 262 0.0 17
(EF554328) Acanthamoeba castellanii strain ATCC 30010 18S ri... 262 0.0 17
(AF019056) Acanthamoeba polyphaga HC-2 18S ribosomal RNA gen... 262 0.0 17
(AF019050) Acanthamoeba pustulosa GE3a 18S ribosomal RNA gen... 262 0.0 17
(AF260724) Acanthamoeba castellanii strain 4CL 18S small sub... 262 0.0 17
(AF019052) Acanthamoeba polyphaga Panola Mountain 18S riboso... 262 0.0 17
(AF019051) Acanthamoeba polyphaga OX-1 18S ribosomal RNA gen... 262 0.0 17
(DQ103890) Acanthamoeba sp. MZOR 18S ribosomal RNA gene, par... 262 0.0 17
(AY694144) Acanthamoeba sp. L98/00 18S ribosomal RNA gene, c... 262 0.0 17
(AY694141) Acanthamoeba sp. L749/98 18S ribosomal RNA gene, ... 262 0.0 17
(AF260720) Acanthamoeba rhysodes 18S small subunit ribosomal... 262 0.0 17
(EF429130) Acanthamoeba sp. PAT05 18S ribosomal RNA gene, pa... 262 0.0 17
(AF019062) Acanthamoeba polyphaga Nagington 18S ribosomal RN... 262 0.0 17
(DQ013363) Acanthamoeba polyphaga 18S ribosomal RNA gene, pa... 262 0.0 17
(AF251939) Acanthamoeba hatchetti 11DS 18S ribosomal RNA gen... 262 0.0 17
(AF019058) Acanthamoeba sp. Vazaldua 18S ribosomal RNA gene,... 262 0.0 17
(AY702983) Acanthamoeba sp. CDC # V017 small subunit ribosom... 262 0.0 17
(AF019057) Acanthamoeba culbertsoni Diamond 18S ribosomal RN... 262 0.0 17
(AF019055) Acanthamoeba sp. Liu-E1 18S ribosomal RNA gene, p... 262 0.0 17
(DQ992180) Acanthamoeba sp. EFW10 18S ribosomal RNA gene, pa... 262 0.0 17
(DQ992179) Acanthamoeba sp. EFW1 18S ribosomal RNA gene, par... 262 0.0 17
(AF019063) Acanthamoeba palestinensis 2802 18S ribosomal RNA... 262 0.0 17
(AF019054) Acanthamoeba sp. Jin-E5 18S ribosomal RNA gene, p... 262 0.0 17
(AF019053) Acanthamoeba pearcei 18S ribosomal RNA gene, part... 262 0.0 17
(EF140631) Acanthamoeba sp. KA/E19 18S ribosomal RNA gene, c... 262 0.0 17
(AY694138) Acanthamoeba sp. L565/97 18S ribosomal RNA gene, ... 262 0.0 17
(AF260722) Acanthamoeba hatchetti strain 2HH 18S small subun... 262 0.0 17
(DQ992185) Acanthamoeba sp. EFW4 18S ribosomal RNA gene, par... 262 0.0 17
(DQ264391) Acanthamoeba sp. FA03 small subunit ribosomal RNA... 262 0.0 17
(AF019059) Acanthamoeba sp. Rodriguez 18S ribosomal RNA gene... 262 0.0 17
(EF024025) Eimeriidae environmental sample clone Amb_18S_150... 246 0.0 17
(EF025004) Uncultured eukaryote clone Elev_18S_4941 18S ribo... 238 0.0 17
(EF023463) Eimeriidae environmental sample clone Amb_18S_104... 238 0.0 17
(BJ361973) Dictyostelium discoideum cDNA clone:ddc19f15, 5' ... 815 0.0 2
(BJ359981) Dictyostelium discoideum cDNA clone:ddc3j18, 5' e... 815 0.0 2
(BJ323839) Dictyostelium discoideum cDNA clone:dda12c16, 5' ... 815 0.0 2
(EF023962) Eimeriidae environmental sample clone Amb_18S_142... 224 0.0 15
(EF023754) Eimeriidae environmental sample clone Amb_18S_119... 224 0.0 15
(EF023730) Eimeriidae environmental sample clone Amb_18S_116... 224 0.0 15
(EF023227) Eimeriidae environmental sample clone Amb_18S_527... 224 0.0 15
(L10825) Microciona prolifera 16S-like small subunit ribosom... 234 0.0 19
(EF023435) Uncultured Sarcosomataceae clone Amb_18S_1009 18S... 254 0.0 17
(AB425952) Acanthamoeba sp. Mbc_3E gene for 18S ribosomal RN... 262 0.0 17

>(AY171066) Dictyostelium discoideum extrachromosomal palindromic
ribosomal RNA gene sequence, central segment.
Length = 79318

Score = 2694 bits (1359), Expect(4) = 0.0
Identities = 1359/1359 (100%)
Strand = Plus / Minus


Query: 1 aagaagagtgagcaagcagatgcaagtgaaagaagccagtaggcgactgacagcatgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11591 aagaagagtgagcaagcagatgcaagtgaaagaagccagtaggcgactgacagcatgcaa 11532


Query: 61 gctgcagcagtgatacgctagtatcagtgtgctcatgtggtcctgctgcctagcagcggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11531 gctgcagcagtgatacgctagtatcagtgtgctcatgtggtcctgctgcctagcagcggt 11472


Query: 121 gccgcctcgtcttctggacattttttggcagacaaacgggtatcggaatcagttgagcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11471 gccgcctcgtcttctggacattttttggcagacaaacgggtatcggaatcagttgagcct 11412


Query: 181 aaccccatggattagcccgtggaaactctcaacagcgattcacccaatcatgtgcactgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11411 aaccccatggattagcccgtggaaactctcaacagcgattcacccaatcatgtgcactgc 11352


Query: 241 gactggcaacagcagtagtgtaccggagcgagtggcccatataacgaggttccttcactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11351 gactggcaacagcagtagtgtaccggagcgagtggcccatataacgaggttccttcactg 11292


Query: 301 gatcggtagttgctgggtggcgagctccaaaccgccacagccatttgctttattgcgagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11291 gatcggtagttgctgggtggcgagctccaaaccgccacagccatttgctttattgcgagc 11232


Query: 361 aatggcacgagtcaccggatgtagcaagcgcgtaaaaaacctgtgctacaaattaatcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11231 aatggcacgagtcaccggatgtagcaagcgcgtaaaaaacctgtgctacaaattaatcgt 11172


Query: 421 ggagcgtgcgccgtccttttctaggtatgcatgcgctctcacaccccaggcggcgacagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11171 ggagcgtgcgccgtccttttctaggtatgcatgcgctctcacaccccaggcggcgacagc 11112


Query: 481 aatgtcggctttctagacgtgtcaaagcgactaggccaatgcaataggtgacggaggagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11111 aatgtcggctttctagacgtgtcaaagcgactaggccaatgcaataggtgacggaggagc 11052


Query: 541 aataaggagatctgttggcaaagtgctgatttactttgtggagcatggttaaaggccaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11051 aataaggagatctgttggcaaagtgctgatttactttgtggagcatggttaaaggccaga 10992


Query: 601 tttaactatctgtcagctaacaatgtaacatttgatgaatctttttaattggtaataaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10991 tttaactatctgtcagctaacaatgtaacatttgatgaatctttttaattggtaataaaa 10932


Query: 661 gtgacgggatctaatcctgtaattttgtgacctcttcaaagggaaacattaaccaaacaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10931 gtgacgggatctaatcctgtaattttgtgacctcttcaaagggaaacattaaccaaacaa 10872


Query: 721 tcaaaacaaaaaataagttttgtaattaatatgtaatagtgattaatatcatgatacgtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10871 tcaaaacaaaaaataagttttgtaattaatatgtaatagtgattaatatcatgatacgtg 10812


Query: 781 ttatctacatgcttaactggttgatcctgccagtagtcatatgcttgtctcaaagattaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10811 ttatctacatgcttaactggttgatcctgccagtagtcatatgcttgtctcaaagattaa 10752


Query: 841 gccatgcatgtctaagtataaattcttgtacgatgaaactgcagacggctcattacaaca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10751 gccatgcatgtctaagtataaattcttgtacgatgaaactgcagacggctcattacaaca 10692


Query: 901 gtgataaactaatagactttcgggttttaccttttggataaccgcagtaaatcggggcta 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10691 gtgataaactaatagactttcgggttttaccttttggataaccgcagtaaatcggggcta 10632


Query: 961 atacatacaagcgatgggtgactggcaacggaagctcagcgattattagcattctaccaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10631 atacatacaagcgatgggtgactggcaacggaagctcagcgattattagcattctaccaa 10572


Query: 1021 tgccttcgggttttgggtgataccgaataatattgcagatcgaggatttatcttcgacaa 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10571 tgccttcgggttttgggtgataccgaataatattgcagatcgaggatttatcttcgacaa 10512


Query: 1081 gtctactgtgtcactgccctatcaactttcgatggtacggtattggcctaccatggttgt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10511 gtctactgtgtcactgccctatcaactttcgatggtacggtattggcctaccatggttgt 10452


Query: 1141 aacgggtaacggggaattagggttcgattccggagagggagcctgagaaatggctaccac 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10451 aacgggtaacggggaattagggttcgattccggagagggagcctgagaaatggctaccac 10392


Query: 1201 ttctacggaaggcagcaggcgcgcaaattactcaatcccaatacggggaagtagtgacaa 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10391 ttctacggaaggcagcaggcgcgcaaattactcaatcccaatacggggaagtagtgacaa 10332


Query: 1261 taaatatcaatacctatcctttttggagggcaattgaaatgaacacaaattaaaactctt 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10331 taaatatcaatacctatcctttttggagggcaattgaaatgaacacaaattaaaactctt 10272


Query: 1321 aattaacacaattggagggcaagtctggtgccagcagcc 1359
|||||||||||||||||||||||||||||||||||||||
Sbjct: 10271 aattaacacaattggagggcaagtctggtgccagcagcc 10233

Score = 2694 bits (1359), Expect(4) = 0.0
Identities = 1359/1359 (100%)
Strand = Plus / Plus


Query: 1 aagaagagtgagcaagcagatgcaagtgaaagaagccagtaggcgactgacagcatgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67728 aagaagagtgagcaagcagatgcaagtgaaagaagccagtaggcgactgacagcatgcaa 67787


Query: 61 gctgcagcagtgatacgctagtatcagtgtgctcatgtggtcctgctgcctagcagcggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67788 gctgcagcagtgatacgctagtatcagtgtgctcatgtggtcctgctgcctagcagcggt 67847


Query: 121 gccgcctcgtcttctggacattttttggcagacaaacgggtatcggaatcagttgagcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67848 gccgcctcgtcttctggacattttttggcagacaaacgggtatcggaatcagttgagcct 67907


Query: 181 aaccccatggattagcccgtggaaactctcaacagcgattcacccaatcatgtgcactgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67908 aaccccatggattagcccgtggaaactctcaacagcgattcacccaatcatgtgcactgc 67967


Query: 241 gactggcaacagcagtagtgtaccggagcgagtggcccatataacgaggttccttcactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67968 gactggcaacagcagtagtgtaccggagcgagtggcccatataacgaggttccttcactg 68027


Query: 301 gatcggtagttgctgggtggcgagctccaaaccgccacagccatttgctttattgcgagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68028 gatcggtagttgctgggtggcgagctccaaaccgccacagccatttgctttattgcgagc 68087


Query: 361 aatggcacgagtcaccggatgtagcaagcgcgtaaaaaacctgtgctacaaattaatcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68088 aatggcacgagtcaccggatgtagcaagcgcgtaaaaaacctgtgctacaaattaatcgt 68147


Query: 421 ggagcgtgcgccgtccttttctaggtatgcatgcgctctcacaccccaggcggcgacagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68148 ggagcgtgcgccgtccttttctaggtatgcatgcgctctcacaccccaggcggcgacagc 68207


Query: 481 aatgtcggctttctagacgtgtcaaagcgactaggccaatgcaataggtgacggaggagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68208 aatgtcggctttctagacgtgtcaaagcgactaggccaatgcaataggtgacggaggagc 68267


Query: 541 aataaggagatctgttggcaaagtgctgatttactttgtggagcatggttaaaggccaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68268 aataaggagatctgttggcaaagtgctgatttactttgtggagcatggttaaaggccaga 68327


Query: 601 tttaactatctgtcagctaacaatgtaacatttgatgaatctttttaattggtaataaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68328 tttaactatctgtcagctaacaatgtaacatttgatgaatctttttaattggtaataaaa 68387


Query: 661 gtgacgggatctaatcctgtaattttgtgacctcttcaaagggaaacattaaccaaacaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68388 gtgacgggatctaatcctgtaattttgtgacctcttcaaagggaaacattaaccaaacaa 68447


Query: 721 tcaaaacaaaaaataagttttgtaattaatatgtaatagtgattaatatcatgatacgtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68448 tcaaaacaaaaaataagttttgtaattaatatgtaatagtgattaatatcatgatacgtg 68507


Query: 781 ttatctacatgcttaactggttgatcctgccagtagtcatatgcttgtctcaaagattaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68508 ttatctacatgcttaactggttgatcctgccagtagtcatatgcttgtctcaaagattaa 68567


Query: 841 gccatgcatgtctaagtataaattcttgtacgatgaaactgcagacggctcattacaaca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68568 gccatgcatgtctaagtataaattcttgtacgatgaaactgcagacggctcattacaaca 68627


Query: 901 gtgataaactaatagactttcgggttttaccttttggataaccgcagtaaatcggggcta 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68628 gtgataaactaatagactttcgggttttaccttttggataaccgcagtaaatcggggcta 68687


Query: 961 atacatacaagcgatgggtgactggcaacggaagctcagcgattattagcattctaccaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68688 atacatacaagcgatgggtgactggcaacggaagctcagcgattattagcattctaccaa 68747


Query: 1021 tgccttcgggttttgggtgataccgaataatattgcagatcgaggatttatcttcgacaa 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68748 tgccttcgggttttgggtgataccgaataatattgcagatcgaggatttatcttcgacaa 68807


Query: 1081 gtctactgtgtcactgccctatcaactttcgatggtacggtattggcctaccatggttgt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68808 gtctactgtgtcactgccctatcaactttcgatggtacggtattggcctaccatggttgt 68867


Query: 1141 aacgggtaacggggaattagggttcgattccggagagggagcctgagaaatggctaccac 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68868 aacgggtaacggggaattagggttcgattccggagagggagcctgagaaatggctaccac 68927


Query: 1201 ttctacggaaggcagcaggcgcgcaaattactcaatcccaatacggggaagtagtgacaa 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68928 ttctacggaaggcagcaggcgcgcaaattactcaatcccaatacggggaagtagtgacaa 68987


Query: 1261 taaatatcaatacctatcctttttggagggcaattgaaatgaacacaaattaaaactctt 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68988 taaatatcaatacctatcctttttggagggcaattgaaatgaacacaaattaaaactctt 69047


Query: 1321 aattaacacaattggagggcaagtctggtgccagcagcc 1359
|||||||||||||||||||||||||||||||||||||||
Sbjct: 69048 aattaacacaattggagggcaagtctggtgccagcagcc 69086

Score = 1509 bits (761), Expect(4) = 0.0
Identities = 761/761 (100%)
Strand = Plus / Minus


Query: 1578 ctgatcttttgcagcatggtatgatgaaacatgacattttacgctattggtttgcgttta 1637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10016 ctgatcttttgcagcatggtatgatgaaacatgacattttacgctattggtttgcgttta 9957


Query: 1638 aagtgtaatgattaatagggatggatgggggtgttcatattggtgggcgagaggtgaaat 1697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9956 aagtgtaatgattaatagggatggatgggggtgttcatattggtgggcgagaggtgaaat 9897


Query: 1698 tcgttgaccctatcaagatgaacttctgcgaaagcattcaccaaatacttccccattaat 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9896 tcgttgaccctatcaagatgaacttctgcgaaagcattcaccaaatacttccccattaat 9837


Query: 1758 caagaacgaaagtttggggatcgaagacgatcagataccgtcgtagtccaaactataaac 1817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9836 caagaacgaaagtttggggatcgaagacgatcagataccgtcgtagtccaaactataaac 9777


Query: 1818 tatgtcgaccagggatcggttaaaattttttcaaaatttaatcggcaccttgtgagaaat 1877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9776 tatgtcgaccagggatcggttaaaattttttcaaaatttaatcggcaccttgtgagaaat 9717


Query: 1878 catgagtgtttagattccggggggagtatggtcgcaagtctgaaacttaaaggaattgac 1937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9716 catgagtgtttagattccggggggagtatggtcgcaagtctgaaacttaaaggaattgac 9657


Query: 1938 ggaagggcacacaatggagtggagcctgcggcttaatttgactcaactcgggaaaactta 1997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9656 ggaagggcacacaatggagtggagcctgcggcttaatttgactcaactcgggaaaactta 9597


Query: 1998 ccaagctaagatatagtaaggattgacagactaaaagatctttcatgattctataagtgg 2057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9596 ccaagctaagatatagtaaggattgacagactaaaagatctttcatgattctataagtgg 9537


Query: 2058 tggtgcatggtcgttcttagttggtggagcgatttgtctggtcaattccgataacggacg 2117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9536 tggtgcatggtcgttcttagttggtggagcgatttgtctggtcaattccgataacggacg 9477


Query: 2118 agacctcgacctgctaactagtagtatttattagtcgatatagacgatagcttttctggg 2177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9476 agacctcgacctgctaactagtagtatttattagtcgatatagacgatagcttttctggg 9417


Query: 2178 gtttggaatgatttcggtcatctcctgcttcaaggagtgtgtagtctgactcgataggta 2237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9416 gtttggaatgatttcggtcatctcctgcttcaaggagtgtgtagtctgactcgataggta 9357


Query: 2238 cgaattaaaacttcttagagggactacctgcctcaagcaggcggaagtccgaggcaataa 2297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9356 cgaattaaaacttcttagagggactacctgcctcaagcaggcggaagtccgaggcaataa 9297


Query: 2298 caggtctgtgatgcccttagataccttgggccgcacgcgcg 2338
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 9296 caggtctgtgatgcccttagataccttgggccgcacgcgcg 9256

Score = 1509 bits (761), Expect(4) = 0.0
Identities = 761/761 (100%)
Strand = Plus / Plus


Query: 1578 ctgatcttttgcagcatggtatgatgaaacatgacattttacgctattggtttgcgttta 1637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69303 ctgatcttttgcagcatggtatgatgaaacatgacattttacgctattggtttgcgttta 69362


Query: 1638 aagtgtaatgattaatagggatggatgggggtgttcatattggtgggcgagaggtgaaat 1697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69363 aagtgtaatgattaatagggatggatgggggtgttcatattggtgggcgagaggtgaaat 69422


Query: 1698 tcgttgaccctatcaagatgaacttctgcgaaagcattcaccaaatacttccccattaat 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69423 tcgttgaccctatcaagatgaacttctgcgaaagcattcaccaaatacttccccattaat 69482


Query: 1758 caagaacgaaagtttggggatcgaagacgatcagataccgtcgtagtccaaactataaac 1817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69483 caagaacgaaagtttggggatcgaagacgatcagataccgtcgtagtccaaactataaac 69542


Query: 1818 tatgtcgaccagggatcggttaaaattttttcaaaatttaatcggcaccttgtgagaaat 1877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69543 tatgtcgaccagggatcggttaaaattttttcaaaatttaatcggcaccttgtgagaaat 69602


Query: 1878 catgagtgtttagattccggggggagtatggtcgcaagtctgaaacttaaaggaattgac 1937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69603 catgagtgtttagattccggggggagtatggtcgcaagtctgaaacttaaaggaattgac 69662


Query: 1938 ggaagggcacacaatggagtggagcctgcggcttaatttgactcaactcgggaaaactta 1997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69663 ggaagggcacacaatggagtggagcctgcggcttaatttgactcaactcgggaaaactta 69722


Query: 1998 ccaagctaagatatagtaaggattgacagactaaaagatctttcatgattctataagtgg 2057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69723 ccaagctaagatatagtaaggattgacagactaaaagatctttcatgattctataagtgg 69782


Query: 2058 tggtgcatggtcgttcttagttggtggagcgatttgtctggtcaattccgataacggacg 2117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69783 tggtgcatggtcgttcttagttggtggagcgatttgtctggtcaattccgataacggacg 69842


Query: 2118 agacctcgacctgctaactagtagtatttattagtcgatatagacgatagcttttctggg 2177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69843 agacctcgacctgctaactagtagtatttattagtcgatatagacgatagcttttctggg 69902


Query: 2178 gtttggaatgatttcggtcatctcctgcttcaaggagtgtgtagtctgactcgataggta 2237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69903 gtttggaatgatttcggtcatctcctgcttcaaggagtgtgtagtctgactcgataggta 69962


Query: 2238 cgaattaaaacttcttagagggactacctgcctcaagcaggcggaagtccgaggcaataa 2297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69963 cgaattaaaacttcttagagggactacctgcctcaagcaggcggaagtccgaggcaataa 70022


Query: 2298 caggtctgtgatgcccttagataccttgggccgcacgcgcg 2338
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 70023 caggtctgtgatgcccttagataccttgggccgcacgcgcg 70063

Score = 652 bits (329), Expect(4) = 0.0
Identities = 329/329 (100%)
Strand = Plus / Minus


Query: 2339 gctacaatgtaggaaacaaaaaggctcctggtccggaaggattgggtaatcatttgaatt 2398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9256 gctacaatgtaggaaacaaaaaggctcctggtccggaaggattgggtaatcatttgaatt 9197


Query: 2399 tcctacgtaactgggcttgatctttgtaattattgatcataaacgaggaattccttgtaa 2458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9196 tcctacgtaactgggcttgatctttgtaattattgatcataaacgaggaattccttgtaa 9137


Query: 2459 gcgtaagtcattaccttatgctgaatatgtccctgccctttgtacacaccgcccgtcgct 2518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9136 gcgtaagtcattaccttatgctgaatatgtccctgccctttgtacacaccgcccgtcgct 9077


Query: 2519 cctaccgatcgaatgatacggtaaagttaacggatcgttttatctgtggcaacactgata 2578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9076 cctaccgatcgaatgatacggtaaagttaacggatcgttttatctgtggcaacactgata 9017


Query: 2579 taaattaaaagttatttaaatctcattgtttagaggaaggagaagtcgtaacaaggtatc 2638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9016 taaattaaaagttatttaaatctcattgtttagaggaaggagaagtcgtaacaaggtatc 8957


Query: 2639 cgtaggtgaacctgcggatggatcatttt 2667
|||||||||||||||||||||||||||||
Sbjct: 8956 cgtaggtgaacctgcggatggatcatttt 8928

Score = 652 bits (329), Expect(4) = 0.0
Identities = 329/329 (100%)
Strand = Plus / Plus


Query: 2339 gctacaatgtaggaaacaaaaaggctcctggtccggaaggattgggtaatcatttgaatt 2398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70063 gctacaatgtaggaaacaaaaaggctcctggtccggaaggattgggtaatcatttgaatt 70122


Query: 2399 tcctacgtaactgggcttgatctttgtaattattgatcataaacgaggaattccttgtaa 2458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70123 tcctacgtaactgggcttgatctttgtaattattgatcataaacgaggaattccttgtaa 70182


Query: 2459 gcgtaagtcattaccttatgctgaatatgtccctgccctttgtacacaccgcccgtcgct 2518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70183 gcgtaagtcattaccttatgctgaatatgtccctgccctttgtacacaccgcccgtcgct 70242


Query: 2519 cctaccgatcgaatgatacggtaaagttaacggatcgttttatctgtggcaacactgata 2578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70243 cctaccgatcgaatgatacggtaaagttaacggatcgttttatctgtggcaacactgata 70302


Query: 2579 taaattaaaagttatttaaatctcattgtttagaggaaggagaagtcgtaacaaggtatc 2638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70303 taaattaaaagttatttaaatctcattgtttagaggaaggagaagtcgtaacaaggtatc 70362


Query: 2639 cgtaggtgaacctgcggatggatcatttt 2667
|||||||||||||||||||||||||||||
Sbjct: 70363 cgtaggtgaacctgcggatggatcatttt 70391

Score = 434 bits (219), Expect(4) = 0.0
Identities = 219/219 (100%)
Strand = Plus / Minus


Query: 1359 ccgcggtaattccagctccaatagcatatactaaagttgttgcagttaaaaagctcgtag 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10234 ccgcggtaattccagctccaatagcatatactaaagttgttgcagttaaaaagctcgtag 10175


Query: 1419 ttgaagtttaaggtttaccgggtttatgtcatttaccacttcgtggttaaatcgacaccg 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10174 ttgaagtttaaggtttaccgggtttatgtcatttaccacttcgtggttaaatcgacaccg 10115


Query: 1479 gtatctctttcttaatagttcagcttgtattatctttgatagtgcttgtttggacatttc 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10114 gtatctctttcttaatagttcagcttgtattatctttgatagtgcttgtttggacatttc 10055


Query: 1539 actgtgagaaaattgtggtgtttaaagcaggcgtctcgc 1577
|||||||||||||||||||||||||||||||||||||||
Sbjct: 10054 actgtgagaaaattgtggtgtttaaagcaggcgtctcgc 10016

Score = 434 bits (219), Expect(4) = 0.0
Identities = 219/219 (100%)
Strand = Plus / Plus


Query: 1359 ccgcggtaattccagctccaatagcatatactaaagttgttgcagttaaaaagctcgtag 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69085 ccgcggtaattccagctccaatagcatatactaaagttgttgcagttaaaaagctcgtag 69144


Query: 1419 ttgaagtttaaggtttaccgggtttatgtcatttaccacttcgtggttaaatcgacaccg 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69145 ttgaagtttaaggtttaccgggtttatgtcatttaccacttcgtggttaaatcgacaccg 69204


Query: 1479 gtatctctttcttaatagttcagcttgtattatctttgatagtgcttgtttggacatttc 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69205 gtatctctttcttaatagttcagcttgtattatctttgatagtgcttgtttggacatttc 69264


Query: 1539 actgtgagaaaattgtggtgtttaaagcaggcgtctcgc 1577
|||||||||||||||||||||||||||||||||||||||
Sbjct: 69265 actgtgagaaaattgtggtgtttaaagcaggcgtctcgc 69303

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 3,462,413,059
Number of extensions: 198795282
Number of successful extensions: 18457694
Number of sequences better than 10.0: 637436
Length of query: 3358
Length of database: 101,790,757,118
Length adjustment: 25
Effective length of query: 3333
Effective length of database: 99,238,119,368
Effective search space: 330760651853544
Effective search space used: 330760651853544
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.28
Homology vs Protein
Query= Contig-U16527-1 (Contig-U16527-1Q) /CSM_Contig/Contig-U16527-1Q.Seq.d
(3358 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q7YZN9) RecName: Full=Eukaryotic peptide chain release factor G... 243 3e-62
DQ489316_1(DQ489316|pid:none) Triticum aestivum GTP-binding prot... 144 2e-32
AL663014_10(AL663014|pid:none) Oryza sativa genomic DNA, chromos... 143 4e-32
AP008210_354(AP008210|pid:none) Oryza sativa (japonica cultivar-... 143 4e-32
AE014186_226(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 142 6e-32
AM910991_208(AM910991|pid:none) Plasmodium knowlesi strain H chr... 142 6e-32
AC034107_8(AC034107|pid:none) Sequence of BAC T10F20 from Arabid... 142 1e-31
BC053244_1(BC053244|pid:none) Danio rerio G1 to S phase transiti... 141 2e-31
L37045_1(L37045|pid:none) Xenopus laevis (clone XLSUP35) SUP35 m... 141 2e-31
BC009503_1(BC009503|pid:none) Homo sapiens G1 to S phase transit... 140 2e-31
AK032059_1(AK032059|pid:none) Mus musculus adult male medulla ob... 140 2e-31
AB003502_1(AB003502|pid:none) Mus musculus mRNA for Guanine Nucl... 140 2e-31
BC134651_1(BC134651|pid:none) Bos taurus G1 to S phase transitio... 140 2e-31
BC031640_1(BC031640|pid:none) Mus musculus G1 to S phase transit... 140 2e-31
AY892650_1(AY892650|pid:none) Synthetic construct Homo sapiens c... 140 2e-31
BC079092_1(BC079092|pid:none) Rattus norvegicus G1 to S phase tr... 140 2e-31
AY890166_1(AY890166|pid:none) Synthetic construct Homo sapiens c... 140 2e-31
AB035256_1(AB035256|pid:none) Oryctolagus cuniculus mRNA for euk... 140 2e-31
BC140515_1(BC140515|pid:none) Bos taurus G1 to S phase transitio... 140 2e-31
AK315267_1(AK315267|pid:none) Homo sapiens cDNA, FLJ96276, highl... 140 2e-31
AB003503_1(AB003503|pid:none) Mus musculus mRNA for Guanine Nucl... 140 3e-31
CR940353_470(CR940353|pid:none) Theileria annulata strain Ankara... 140 4e-31
AK001303_1(AK001303|pid:none) Homo sapiens cDNA FLJ10441 fis, cl... 139 5e-31
AK023155_1(AK023155|pid:none) Homo sapiens cDNA FLJ13093 fis, cl... 139 5e-31
AK298868_1(AK298868|pid:none) Homo sapiens cDNA FLJ55563 complet... 139 5e-31
AB179145_1(AB179145|pid:none) Macaca fascicularis testis cDNA cl... 139 5e-31
DQ443294_1(DQ443294|pid:none) Bombyx mori GTP binding translatio... 139 5e-31
DQ311165_1(DQ311165|pid:none) Bombyx mori elongation factor 1 al... 139 5e-31
(Q5R4B3) RecName: Full=Eukaryotic peptide chain release factor G... 139 5e-31
BC080263_1(BC080263|pid:none) Danio rerio zgc:91975, mRNA (cDNA ... 139 7e-31
T23102(T23102)hypothetical protein H19N07.1 - Caenorhabditis ele... 139 9e-31
(Q9HGI7) RecName: Full=Eukaryotic peptide chain release factor G... 136 5e-30
CQ840947_1(CQ840947|pid:none) Sequence 42 from Patent EP1439230.... 136 5e-30
(Q9HGI6) RecName: Full=Eukaryotic peptide chain release factor G... 136 5e-30
CP000498_474(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 136 5e-30
(O13354) RecName: Full=Eukaryotic peptide chain release factor G... 136 5e-30
FM992689_881(FM992689|pid:none) Candida dubliniensis CD36 chromo... 136 5e-30
CR380951_24(CR380951|pid:none) Candida glabrata strain CBS138 ch... 136 6e-30
(P23637) RecName: Full=Eukaryotic peptide chain release factor G... 135 8e-30
AY553989_1(AY553989|pid:none) Saccharomyces cerevisiae translati... 135 1e-29
AY052613_1(AY052613|pid:none) Saccharomyces cerevisiae strain SL... 135 1e-29
AY028647_1(AY028647|pid:none) Saccharomyces cerevisiae strain SC... 135 1e-29
AY052620_1(AY052620|pid:none) Saccharomyces cerevisiae strain YJ... 135 1e-29
(Q9HGI4) RecName: Full=Eukaryotic peptide chain release factor G... 135 1e-29
AY052615_1(AY052615|pid:none) Saccharomyces cerevisiae strain BA... 135 1e-29
AY553984_1(AY553984|pid:none) Saccharomyces cerevisiae translati... 135 1e-29
AY052621_1(AY052621|pid:none) Saccharomyces cerevisiae strain YJ... 135 1e-29
AY028646_1(AY028646|pid:none) Saccharomyces cerevisiae strain SC... 135 1e-29
FN392321_412(FN392321|pid:none) Pichia pastoris GS115 chromosome... 135 1e-29
AY052612_1(AY052612|pid:none) Saccharomyces paradoxus Sup35p gen... 135 1e-29
CU928178_621(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 135 1e-29
U88868_1(U88868|pid:none) Drosophila melanogaster elongation fac... 133 5e-29
AC069551_4(AC069551|pid:none) Genomic sequence for Arabidopsis t... 131 1e-28
AF198110_1(AF198110|pid:none) Oxytricha trifallax eukaryotic rel... 129 6e-28
FN320377_1(FN320377|pid:none) Schistosoma japonicum isolate Anhu... 128 2e-27
FN315207_1(FN315207|pid:none) Schistosoma japonicum isolate Anhu... 128 2e-27
FN320379_1(FN320379|pid:none) Schistosoma japonicum isolate Anhu... 128 2e-27
AF045014_1(AF045014|pid:none) Podospora anserina translation rel... 128 2e-27
FN357298_26(FN357298|pid:none) Schistosoma mansoni genome sequen... 127 3e-27
T51896(T51896)probable translation release factor erf3 [imported... 127 4e-27
AB039752_1(AB039752|pid:none) Yarrowia lipolytica sup35 gene for... 127 4e-27
CR382128_310(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 127 4e-27
AE017346_159(AE017346|pid:none) Cryptococcus neoformans var. neo... 127 4e-27
D79214_1(D79214|pid:none) Schizosaccharomyces pombe DNA for omni... 126 5e-27
AF198111_1(AF198111|pid:none) Euplotes aediculatus eukaryotic re... 124 2e-26
AM494948_97(AM494948|pid:none) Leishmania braziliensis chromosom... 124 2e-26
AF206288_1(AF206288|pid:none) Kluyveromyces lactis SUP35 homolog... 123 5e-26
AM270234_8(AM270234|pid:none) Aspergillus niger contig An11c0170... 121 2e-25
AF198109_1(AF198109|pid:none) Trichomonas vaginalis eukaryotic r... 120 3e-25
AP007155_248(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 119 7e-25
AM920427_1018(AM920427|pid:none) Penicillium chrysogenum Wiscons... 115 1e-23
AF198108_2(AF198108|pid:none) Giardia intestinalis eukaryotic re... 110 3e-22
AF206290_1(AF206290|pid:none) Pichia pastoris SUP35 homolog (SUP... 110 5e-22
CR954204_166(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 103 6e-20
(A1RXW9) RecName: Full=Elongation factor 1-alpha; Short... 102 7e-20
X55973_1(X55973|pid:none) D. discoideum EF1-I gene for elongatio... 99 8e-19
AK166140_1(AK166140|pid:none) Mus musculus lung RCB-0558 LLC cDN... 98 2e-18
BC010251_1(BC010251|pid:none) Mus musculus Hbs1-like (S. cerevis... 98 2e-18
AK173091_1(AK173091|pid:none) Mus musculus mRNA for mKIAA1038 pr... 98 2e-18
AF087672_1(AF087672|pid:none) Mus musculus eRFS mRNA, complete c... 98 2e-18
(Q5R6Y0) RecName: Full=HBS1-like protein; &CR860346_1(CR860346|... 97 3e-18
AK292656_1(AK292656|pid:none) Homo sapiens cDNA FLJ77957 complet... 97 3e-18
AB028961_1(AB028961|pid:none) Homo sapiens mRNA for KIAA1038 pro... 97 3e-18
AK295545_1(AK295545|pid:none) Homo sapiens cDNA FLJ50159 complet... 97 3e-18
(Q9Y450) RecName: Full=HBS1-like protein; AltName: Full=ERFS; &... 97 3e-18
AK298336_1(AK298336|pid:none) Homo sapiens cDNA FLJ52343 complet... 97 3e-18
AK024258_1(AK024258|pid:none) Homo sapiens cDNA FLJ14196 fis, cl... 97 4e-18
(Q57770) RecName: Full=Elongation factor 1-alpha; Short... 97 5e-18
BC073427_1(BC073427|pid:none) Xenopus laevis MGC80911 protein, m... 96 7e-18
BT045574_1(BT045574|pid:none) Salmo salar clone ssal-rgf-525-146... 96 7e-18
BC044162_1(BC044162|pid:none) Danio rerio HBS1-like (S. cerevisi... 95 2e-17
AY185334_1(AY185334|pid:none) Trypanosoma brucei eukaryotic rele... 95 2e-17
X55972_1(X55972|pid:none) D. discoideum EF1-II gene for elongati... 95 2e-17
(P18624) RecName: Full=Elongation factor 1-alpha; Short... 95 2e-17
AE014296_397(AE014296|pid:none) Drosophila melanogaster chromoso... 94 3e-17
AY542532_1(AY542532|pid:none) Cladonema radiatum translation elo... 94 3e-17
(A8MAJ1) RecName: Full=Elongation factor 1-alpha; Short... 93 6e-17
(A0B7D6) RecName: Full=Elongation factor 1-alpha; Short... 93 6e-17
(P50257) RecName: Full=Elongation factor 1-alpha S; Sho... 93 6e-17
(Q8TRC4) RecName: Full=Elongation factor 1-alpha; Short... 93 6e-17
FN320381_1(FN320381|pid:none) Schistosoma japonicum isolate Anhu... 93 8e-17
T23393(T23393)hypothetical protein K07A12.4 - Caenorhabditis ele... 92 1e-16
Z81098_7(Z81098|pid:none) Caenorhabditis elegans Cosmid K07A12, ... 92 1e-16
(O29325) RecName: Full=Elongation factor 1-alpha; Short... 92 1e-16
AJ549292_1(AJ549292|pid:none) Podocoryne carnea mRNA for elongat... 92 1e-16
AY115575_1(AY115575|pid:none) Trichophyton rubrum elongation fac... 92 1e-16
(Q464Z4) RecName: Full=Elongation factor 1-alpha; Short... 92 2e-16
AB122066_1(AB122066|pid:none) Crassostrea gigas EF1-alpha mRNA f... 91 2e-16
AB002753_1(AB002753|pid:none) Entamoeba histolytica mRNA for elo... 91 2e-16
AM055942_137(AM055942|pid:none) Toxoplasma gondii RH, genomic DN... 91 3e-16
(P62631) RecName: Full=Elongation factor 1-alpha 2; Sho... 91 3e-16
(Q8PUR8) RecName: Full=Elongation factor 1-alpha; Short... 91 3e-16
(P40911) RecName: Full=Elongation factor 1-alpha; Short... 91 3e-16
FJ807243_1(FJ807243|pid:none) Peranema trichophorum strain CCAP ... 91 3e-16
AY891103_1(AY891103|pid:none) Synthetic construct Homo sapiens c... 91 3e-16
(P90519) RecName: Full=Elongation factor 1-alpha; Short... 91 3e-16
BC054279_1(BC054279|pid:none) Xenopus laevis eukaryotic translat... 91 3e-16
AJ581004_1(AJ581004|pid:none) Axinella verrucosa mRNA for elonga... 91 3e-16
(Q9Y713) RecName: Full=Elongation factor 1-alpha; Short... 91 3e-16
AJ581008_1(AJ581008|pid:none) Pleurobrachia pileus mRNA for elon... 91 3e-16
AY891104_1(AY891104|pid:none) Synthetic construct Homo sapiens c... 91 3e-16
U69697_1(U69697|pid:none) Cryptosporidium parvum elongation fact... 91 3e-16
(A4FWE9) RecName: Full=Elongation factor 1-alpha; Short... 91 3e-16
(Q6LXI1) RecName: Full=Elongation factor 1-alpha; Short... 91 4e-16
(A6UQ14) RecName: Full=Elongation factor 1-alpha; Short... 91 4e-16
BC075885_1(BC075885|pid:none) Danio rerio zgc:92085, mRNA (cDNA ... 91 4e-16
AL450341_18(AL450341|pid:none) Mouse DNA sequence from clone RP2... 91 4e-16
(A6VGV6) RecName: Full=Elongation factor 1-alpha; Short... 91 4e-16
(P07810) RecName: Full=Elongation factor 1-alpha; Short... 91 4e-16
(Q96WZ1) RecName: Full=Elongation factor 1-alpha; Short... 91 4e-16
DQ322644_1(DQ322644|pid:none) Babesia bovis strain Mo7 elongatio... 90 5e-16
AY445082_1(AY445082|pid:none) Metarhizium anisopliae strain E6 t... 90 5e-16
DQ134029_1(DQ134029|pid:none) Epichloe yangzii isolate Rnj3203 t... 90 5e-16
DQ440206_1(DQ440206|pid:none) Aedes aegypti clone AET-205 transl... 90 5e-16
AB490338_1(AB490338|pid:none) Polypedilum vanderplanki PvEf1-alp... 90 5e-16
(P29520) RecName: Full=Elongation factor 1-alpha; Short... 90 5e-16
(A8ABM5) RecName: Full=Elongation factor 1-alpha; Short... 90 5e-16
AJ250733_1(AJ250733|pid:none) Dreissena polymorpha mRNA for tran... 90 5e-16
(Q6L202) RecName: Full=Elongation factor 1-alpha; Short... 90 5e-16
AB240552_1(AB240552|pid:none) Paralichthys olivaceus mRNA for el... 90 6e-16
AF015267_1(AF015267|pid:none) Apis mellifera elongation factor-1... 90 6e-16
EU016386_1(EU016386|pid:none) Trichoplusia ni clone L608 elongat... 90 6e-16
AY531949_1(AY531949|pid:none) Beauveria bassiana isolate 7044 tr... 90 6e-16
EU709884_1(EU709884|pid:none) Epichloe sp. Brhs6402 translation ... 90 6e-16
AY752802_1(AY752802|pid:none) Culicoides sonorensis clone CsEF1a... 90 6e-16
S01193(S01193) translation elongation factor eEF-1 alpha chain (... 90 6e-16
EU709885_1(EU709885|pid:none) Epichloe sp. Brhs6710 translation ... 90 6e-16
AY531948_1(AY531948|pid:none) Beauveria bassiana isolate 7043 tr... 90 6e-16
EU152294_1(EU152294|pid:none) Dictyocaulus viviparus elongation ... 90 6e-16
(Q90835) RecName: Full=Elongation factor 1-alpha 1; Sho... 89 8e-16
AK167843_1(AK167843|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 89 8e-16
EF014948_1(EF014948|pid:none) Pichia pastoris translation elonga... 89 8e-16
EU953172_1(EU953172|pid:none) Zea mays clone 1388537 elongation ... 89 8e-16
(Q92005) RecName: Full=Elongation factor 1-alpha; Short... 89 8e-16
AB174733_1(AB174733|pid:none) Macaca fascicularis brain cDNA clo... 89 8e-16
(P10126) RecName: Full=Elongation factor 1-alpha 1; Sho... 89 8e-16
AL603910_10(AL603910|pid:none) Human DNA sequence from clone RP1... 89 8e-16
M22432_1(M22432|pid:none) Mus musculus protein synthesis elongat... 89 8e-16
BC071619_1(BC071619|pid:none) Homo sapiens eukaryotic translatio... 89 8e-16
FB784593_1(FB784593|pid:none) Sequence 3866 from Patent WO200803... 89 8e-16
AF136823_1(AF136823|pid:none) Zea mays clone a elongation factor... 89 8e-16
EF676249_1(EF676249|pid:none) Picea sitchensis clone WS02724_D06... 89 8e-16
AF281361_1(AF281361|pid:none) Saccharum officinarum elongation f... 89 8e-16
AF136828_1(AF136828|pid:none) Zea mays clone f elongation factor... 89 8e-16
(Q2HJN6) RecName: Full=Elongation factor 1-alpha 3; Sho... 89 8e-16
DQ060256_1(DQ060256|pid:none) Caenorhabditis remanei elongation ... 89 8e-16
AB098991_1(AB098991|pid:none) Bos taurus mRNA for similar to elo... 89 8e-16
(P53013) RecName: Full=Elongation factor 1-alpha; Short... 89 8e-16
AY893896_1(AY893896|pid:none) Synthetic construct Homo sapiens c... 89 8e-16
(A2Q0Z0) RecName: Full=Elongation factor 1-alpha 1; Sho... 89 8e-16
U81804_1(U81804|pid:none) Filobasidiella neoformans translation ... 89 8e-16
AY500140_1(AY500140|pid:none) Homalodisca coagulata putative elo... 89 8e-16
FN392319_1522(FN392319|pid:none) Pichia pastoris GS115 chromosom... 89 8e-16
AK222551_1(AK222551|pid:none) Homo sapiens mRNA for eukaryotic t... 89 8e-16
AK223046_1(AK223046|pid:none) Homo sapiens mRNA for eukaryotic t... 89 8e-16
(Q2HJN9) RecName: Full=Elongation factor 1-alpha 4; Sho... 89 8e-16
(Q2HJN8) RecName: Full=Elongation factor 1-alpha 2; Sho... 89 8e-16
AF136826_1(AF136826|pid:none) Zea mays clone d elongation factor... 89 8e-16
AB124568_1(AB124568|pid:none) Pelodiscus sinensis PsEF1a mRNA fo... 89 8e-16
AK133725_1(AK133725|pid:none) Mus musculus 6 days neonate head c... 89 8e-16
CP001140_1365(CP001140|pid:none) Desulfurococcus kamchatkensis 1... 89 8e-16
AK297878_1(AK297878|pid:none) Homo sapiens cDNA FLJ52573 complet... 89 8e-16
(P08736) RecName: Full=Elongation factor 1-alpha 1; Sho... 89 8e-16
FB784601_1(FB784601|pid:none) Sequence 3874 from Patent WO200803... 89 8e-16
DQ333888_1(DQ333888|pid:none) Hirudo medicinalis putative elonga... 89 8e-16
AK032914_1(AK032914|pid:none) Mus musculus 12 days embryo male w... 89 8e-16
AY928339_1(AY928339|pid:none) Oscheius tipulae clone pA1 eukaryo... 89 8e-16
AB253792_1(AB253792|pid:none) Athalia rosae EF-1-alpha mRNA for ... 89 8e-16
BC157768_1(BC157768|pid:none) Xenopus tropicalis eukaryotic tran... 89 8e-16
(P13549) RecName: Full=Elongation factor 1-alpha, somatic form; ... 89 8e-16
DQ403163_1(DQ403163|pid:none) Capsaspora owczarzaki translation ... 89 8e-16
BC105315_1(BC105315|pid:none) Bos taurus eukaryotic translation ... 89 8e-16
CR861176_1(CR861176|pid:none) Pongo abelii mRNA; cDNA DKFZp459L0... 89 8e-16
AF267861_1(AF267861|pid:none) Homo sapiens EF1a-like protein mRN... 89 8e-16
AJ250539_1(AJ250539|pid:none) Anisakis simplex mRNA for putative... 89 8e-16
(P68103) RecName: Full=Elongation factor 1-alpha 1; Sho... 89 8e-16
DQ250681_1(DQ250681|pid:none) Ancylostoma ceylanicum translation... 89 8e-16
U72244_1(U72244|pid:none) Leishmania braziliensis tandemly repea... 89 1e-15
AY643400_1(AY643400|pid:none) Pimephales promelas elongation fac... 89 1e-15
(O64937) RecName: Full=Elongation factor 1-alpha; Short... 89 1e-15
AY785728_1(AY785728|pid:none) Trypanosoma rangeli strain San Agu... 89 1e-15
FB784589_1(FB784589|pid:none) Sequence 3862 from Patent WO200803... 89 1e-15
AY785691_1(AY785691|pid:none) Trypanosoma cruzi strain Esmeraldo... 89 1e-15
AY785665_1(AY785665|pid:none) Trypanosoma cruzi strain M6241 cl6... 89 1e-15
FB784751_1(FB784751|pid:none) Sequence 4024 from Patent WO200803... 89 1e-15
AB032900_1(AB032900|pid:none) Seriola quinqueradiata mRNA for el... 89 1e-15
FB784741_1(FB784741|pid:none) Sequence 4014 from Patent WO200803... 89 1e-15
AY785675_1(AY785675|pid:none) Trypanosoma cruzi strain NR cl3 cl... 89 1e-15
BC088010_1(BC088010|pid:none) Xenopus tropicalis eukaryotic tran... 89 1e-15
AY785676_1(AY785676|pid:none) Trypanosoma cruzi strain NR cl3 cl... 89 1e-15
BT071272_1(BT071272|pid:none) Picea sitchensis clone WS02817_F13... 89 1e-15
(P02994) RecName: Full=Elongation factor 1-alpha; Short... 89 1e-15
BC071727_1(BC071727|pid:none) Homo sapiens eukaryotic translatio... 89 1e-15
AY785685_1(AY785685|pid:none) Trypanosoma cruzi strain Basileu c... 89 1e-15
EU976709_1(EU976709|pid:none) Zea mays clone 988175 elongation f... 89 1e-15
AB240549_1(AB240549|pid:none) Paralichthys olivaceus mRNA for el... 89 1e-15
BC092884_1(BC092884|pid:none) Danio rerio zgc:110335, mRNA (cDNA... 89 1e-15
EF677879_1(EF677879|pid:none) Picea sitchensis clone WS0277_C20 ... 89 1e-15
AY785660_1(AY785660|pid:none) Trypanosoma cruzi strain Dm 28 c c... 89 1e-15
BC060907_1(BC060907|pid:none) Danio rerio zgc:73138, mRNA (cDNA ... 89 1e-15
AM494954_9(AM494954|pid:none) Leishmania braziliensis chromosome... 89 1e-15
DQ174251_1(DQ174251|pid:none) Gossypium hirsutum translation elo... 89 1e-15
AY785666_1(AY785666|pid:none) Trypanosoma cruzi strain M6241 cl6... 89 1e-15
(Q41803) RecName: Full=Elongation factor 1-alpha; Short... 89 1e-15
FM200063_1(FM200063|pid:none) Histomonas meleagridis partial mRN... 89 1e-15
CR380950_46(CR380950|pid:none) Candida glabrata strain CBS138 ch... 89 1e-15
AF331849_1(AF331849|pid:none) Saccharum hybrid cultivar CP65-357... 89 1e-15
AY785688_1(AY785688|pid:none) Trypanosoma cruzi strain CA1 clone... 89 1e-15
AY785668_1(AY785668|pid:none) Trypanosoma cruzi strain Silvio X1... 89 1e-15
AY785657_1(AY785657|pid:none) Trypanosoma cruzi strain Colombian... 89 1e-15
AY531884_1(AY531884|pid:none) Beauveria bassiana isolate 1153 tr... 89 1e-15
AY849694_1(AY849694|pid:none) Magnaporthe grisea elongation fact... 89 1e-15
AK317216_1(AK317216|pid:none) Arabidopsis thaliana AT1G07930 mRN... 89 1e-15
(Q979T1) RecName: Full=Elongation factor 1-alpha; Short... 89 1e-15
AJ223969_1(AJ223969|pid:none) Malus domestica mRNA for elongatio... 89 1e-15
AF416379_1(AF416379|pid:none) Leishmania donovani elongation fac... 89 1e-15
BA000011_1079(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA... 89 1e-15
AC026875_2(AC026875|pid:none) Genomic sequence for Arabidopsis t... 89 1e-15
DQ174254_1(DQ174254|pid:none) Gossypium hirsutum translation elo... 89 1e-15
D63396_1(D63396|pid:none) Nicotiana tabacum mRNA for elongation ... 89 1e-15
FB784587_1(FB784587|pid:none) Sequence 3860 from Patent WO200803... 89 1e-15
DQ174257_1(DQ174257|pid:none) Gossypium hirsutum translation elo... 89 1e-15
AY065008_1(AY065008|pid:none) Arabidopsis thaliana At1g07930/T6D... 89 1e-15
EF490880_1(EF490880|pid:none) Lepeophtheirus salmonis clone LS00... 89 1e-15
FB784731_1(FB784731|pid:none) Sequence 4004 from Patent WO200803... 89 1e-15
AF360167_1(AF360167|pid:none) Arabidopsis thaliana putative tran... 89 1e-15
AF467776_1(AF467776|pid:none) Scophthalmus maximus EF1alpha mRNA... 89 1e-15
(O49169) RecName: Full=Elongation factor 1-alpha; Short... 89 1e-15
AY531907_1(AY531907|pid:none) Beauveria bassiana isolate 1969 tr... 89 1e-15
AF172083_1(AF172083|pid:none) Paramecium tetraurelia translation... 89 1e-15
AM270408_32(AM270408|pid:none) Aspergillus niger contig An18c016... 89 1e-15
CT005256_10(CT005256|pid:none) Leishmania major strain Friedlin,... 89 1e-15
AY531918_1(AY531918|pid:none) Beauveria bassiana isolate 2857 tr... 89 1e-15
EU969402_1(EU969402|pid:none) Zea mays clone 329758 elongation f... 89 1e-15
DQ174256_1(DQ174256|pid:none) Gossypium hirsutum translation elo... 89 1e-15
AB106676_1(AB106676|pid:none) Avicennia marina EF1-A mRNA for el... 89 1e-15
AY062553_1(AY062553|pid:none) Arabidopsis thaliana putative elon... 89 1e-15
AY531899_1(AY531899|pid:none) Beauveria bassiana isolate 1685 tr... 89 1e-15
BT043569_1(BT043569|pid:none) Salmo salar clone HM4_2380 elongat... 89 1e-15
CR382122_362(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 89 1e-15
AF181491_1(AF181491|pid:none) Lilium longiflorum elongation fact... 89 1e-15
AB245432_1(AB245432|pid:none) Pocillopora damicornis EF1-alpha m... 89 1e-15
AM426329_1(AM426329|pid:none) Vitis vinifera contig VV78X075083.... 89 1e-15
AB116235_1(AB116235|pid:none) Rosellinia sp. PF1022 tef1 gene fo... 89 1e-15
D45837_1(D45837|pid:none) Neurospora crassa DNA for elongation f... 89 1e-15
AY973258_1(AY973258|pid:none) Leishmania major elongation factor... 89 1e-15
(Q00251) RecName: Full=Elongation factor 1-alpha; Short... 89 1e-15
(P13905) RecName: Full=Elongation factor 1-alpha; Short... 89 1e-15
(Q9YIC0) RecName: Full=Elongation factor 1-alpha; Short... 89 1e-15
S08534(S08534) translation elongation factor eEF-1 alpha chain (... 89 1e-15
(P34825) RecName: Full=Elongation factor 1-alpha; Short... 89 1e-15
AY531917_1(AY531917|pid:none) Beauveria bassiana isolate 2641 tr... 89 1e-15
S12090(S12090) translation elongation factor aEF-1 alpha chain -... 89 1e-15
AY531887_1(AY531887|pid:none) Beauveria bassiana isolate 1359 tr... 89 1e-15
(Q01765) RecName: Full=Elongation factor 1-alpha; Short... 89 1e-15
FB784613_1(FB784613|pid:none) Sequence 3886 from Patent WO200803... 89 1e-15
DQ174250_1(DQ174250|pid:none) Gossypium hirsutum translation elo... 89 1e-15
DQ174252_1(DQ174252|pid:none) Gossypium hirsutum translation elo... 89 1e-15
DQ174253_1(DQ174253|pid:none) Gossypium hirsutum translation elo... 89 1e-15
AF181492_1(AF181492|pid:none) Lilium longiflorum elongation fact... 89 1e-15
FB784591_1(FB784591|pid:none) Sequence 3864 from Patent WO200803... 89 1e-15
EU916202_1(EU916202|pid:none) Ziziphus jujuba translation elonga... 89 1e-15
FB784713_1(FB784713|pid:none) Sequence 3986 from Patent WO200803... 89 1e-15
AY190693_1(AY190693|pid:none) Pagrus major elongation factor 1-a... 88 2e-15
AY531881_1(AY531881|pid:none) Beauveria bassiana isolate 1040 tr... 88 2e-15
AF136829_1(AF136829|pid:none) Zea mays clone g elongation factor... 88 2e-15
U81803_1(U81803|pid:none) Filobasidiella neoformans translation ... 88 2e-15
BT070573_1(BT070573|pid:none) Picea sitchensis clone WS02736_O15... 88 2e-15
DQ837657_1(DQ837657|pid:none) Fusarium oxysporum f. sp. lactucae... 88 2e-15
AK073254_1(AK073254|pid:none) Oryza sativa Japonica Group cDNA c... 88 2e-15
(P41203) RecName: Full=Elongation factor 1-alpha; Short... 88 2e-15
(P51554) RecName: Full=Elongation factor 1-alpha; Short... 88 2e-15
AP008207_113(AP008207|pid:none) Oryza sativa (japonica cultivar-... 88 2e-15
FJ807244_1(FJ807244|pid:none) Reclinomonas americana elongation ... 88 2e-15
FN357919_5(FN357919|pid:none) Schistosoma mansoni genome sequenc... 88 2e-15
CU928170_492(CU928170|pid:none) Kluyveromyces thermotolerans str... 88 2e-15
AY531941_1(AY531941|pid:none) Beauveria bassiana isolate 652 tra... 88 2e-15
AF291058_1(AF291058|pid:none) Fusarium proliferatum NRRL 31071 e... 88 2e-15
S54734(S54734;S38464)translation elongation factor aEF-1 alpha c... 88 2e-15
EF145289_1(EF145289|pid:none) Populus trichocarpa clone WS01122_... 88 2e-15
EU926288_1(EU926288|pid:none) Fusarium domesticum strain CBS 102... 88 2e-15
FJ715696_1(FJ715696|pid:none) Cladophora coelothrix strain Ccoel... 88 2e-15
FN323399_1(FN323399|pid:none) Schistosoma japonicum isolate Anhu... 88 2e-15
FN323416_1(FN323416|pid:none) Schistosoma japonicum isolate Anhu... 88 2e-15
FN323396_1(FN323396|pid:none) Schistosoma japonicum isolate Anhu... 88 2e-15
AB306940_1(AB306940|pid:none) Echinococcus shiquicus ef1a gene f... 88 2e-15
EU709883_1(EU709883|pid:none) Epichloe sp. Brhs6201 translation ... 88 2e-15
FN323397_1(FN323397|pid:none) Schistosoma japonicum isolate Anhu... 88 2e-15
(P50256) RecName: Full=Elongation factor 1-alpha C; Sho... 88 2e-15
FN323413_1(FN323413|pid:none) Schistosoma japonicum isolate Anhu... 88 2e-15
FJ807238_1(FJ807238|pid:none) Euglena gracilis elongation factor... 88 2e-15
AY336495_1(AY336495|pid:none) Schistosoma japonicum elongation f... 88 2e-15
DQ174255_1(DQ174255|pid:none) Gossypium hirsutum translation elo... 88 2e-15
EF147322_1(EF147322|pid:none) Populus trichocarpa clone WS0122_J... 88 2e-15
FN323403_1(FN323403|pid:none) Schistosoma japonicum isolate Anhu... 88 2e-15
(Q18EY5) RecName: Full=Elongation factor 1-alpha; Short... 88 2e-15
FN323419_1(FN323419|pid:none) Schistosoma japonicum isolate Anhu... 88 2e-15
(Q04634) RecName: Full=Elongation factor 1-alpha; Short... 88 2e-15
(P17508) RecName: Full=Elongation factor 1-alpha, oocyte form; A... 88 2e-15
FN323402_1(FN323402|pid:none) Schistosoma japonicum isolate Anhu... 88 2e-15
FM992689_752(FM992689|pid:none) Candida dubliniensis CD36 chromo... 88 2e-15
(Q10119) RecName: Full=Elongation factor 1-alpha-B/C; S... 88 2e-15
(P50522) RecName: Full=Elongation factor 1-alpha-A; Sho... 88 2e-15
AY531943_1(AY531943|pid:none) Beauveria bassiana isolate 6721 tr... 88 2e-15
FN316452_1(FN316452|pid:none) Schistosoma japonicum isolate Anhu... 88 2e-15
(P16017) RecName: Full=Elongation factor 1-alpha; Short... 88 2e-15
JC5117(JC5117) translation elongation factor eEF-1 alpha - Trypa... 88 2e-15
FN323408_1(FN323408|pid:none) Schistosoma japonicum isolate Anhu... 88 2e-15
AB306938_1(AB306938|pid:none) Echinococcus vogeli ef1a gene for ... 88 2e-15
AK100658_1(AK100658|pid:none) Oryza sativa Japonica Group cDNA c... 88 2e-15
AY741761_1(AY741761|pid:none) Penicillium brocae strain NRRL 314... 88 2e-15
FN316451_1(FN316451|pid:none) Schistosoma japonicum isolate Anhu... 88 2e-15
EF474125_1(EF474125|pid:none) Monocercomonoides sp. PA clone 1/2... 88 2e-15
FN316459_1(FN316459|pid:none) Schistosoma japonicum isolate Anhu... 88 2e-15
(P28295) RecName: Full=Elongation factor 1-alpha; Short... 88 2e-15
EU091060_1(EU091060|pid:none) Fusarium sp. F55 translation elong... 88 2e-15
CP000496_913(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 88 2e-15
FJ807241_1(FJ807241|pid:none) Jakoba libera elongation factor 1 ... 88 2e-15
D89112_1(D89112|pid:none) Schizosaccharomyces pombe mRNA, partia... 88 2e-15
(P14864) RecName: Full=Elongation factor 1-alpha; Short... 88 2e-15
AB429238_1(AB429238|pid:none) Dicyema japonicum ef1a gene for el... 88 2e-15
EF147714_1(EF147714|pid:none) Populus trichocarpa clone WS0124_H... 87 3e-15
A54760(A54760;C49394)translation elongation factor eEF-1 alpha c... 87 3e-15
AF120093_1(AF120093|pid:none) Nicotiana tabacum elongation facto... 87 3e-15
DQ278441_1(DQ278441|pid:none) Lymnaea stagnalis elongation facto... 87 3e-15
AY741759_1(AY741759|pid:none) Penicillium fellutanum strain NRRL... 87 3e-15
AB326305_1(AB326305|pid:none) Solea senegalensis SseEF1A4 mRNA f... 87 3e-15
AY741756_1(AY741756|pid:none) Penicillium charlesii strain NRRL ... 87 3e-15
AY785684_1(AY785684|pid:none) Trypanosoma cruzi strain MT4167 cl... 87 3e-15
AF121261_1(AF121261|pid:none) Lilium longiflorum elongation fact... 87 3e-15
AY743665_1(AY743665|pid:none) Ambomucor seriatoinflatus translat... 87 3e-15
FJ807246_1(FJ807246|pid:none) Stachyamoeba lipophora elongation ... 87 3e-15
(P41166) RecName: Full=Elongation factor 1-alpha; Short... 87 3e-15
(P32186) RecName: Full=Elongation factor 1-alpha; Short... 87 3e-15
AB199910_1(AB199910|pid:none) Hyla japonica ef 1a mRNA for elong... 87 3e-15
BC064177_1(BC064177|pid:none) Xenopus tropicalis eukaryotic tran... 87 3e-15
AY741757_1(AY741757|pid:none) Penicillium chermesinum strain NRR... 87 3e-15
CR382136_102(CR382136|pid:none) Debaryomyces hansenii strain CBS... 87 3e-15
EF152431_1(EF152431|pid:none) Fusarium equiseti isolate H02-765S... 87 4e-15
(P34824) RecName: Full=Elongation factor 1-alpha; Short... 87 4e-15
EU091043_1(EU091043|pid:none) Fusarium sp. F10 translation elong... 87 4e-15
AJ970312_1(AJ970312|pid:none) Hebeloma cylindrosporum mRNA for e... 87 4e-15
EU091041_1(EU091041|pid:none) Fusarium sp. F8 translation elonga... 87 4e-15
EU744739_1(EU744739|pid:none) Fusarium poae strain HSu1a transla... 87 4e-15
AB126336_1(AB126336|pid:none) Nematostella vectensis EF1alpha mR... 87 4e-15
BT070606_1(BT070606|pid:none) Picea sitchensis clone WS02739_H11... 87 4e-15
(P27592) RecName: Full=Elongation factor 1-alpha; Short... 87 4e-15
M25504_1(M25504|pid:none) X.laevis elongation factor-1 alpha-cha... 87 4e-15
(A2STF0) RecName: Full=Elongation factor 1-alpha; Short... 87 4e-15
EU091051_1(EU091051|pid:none) Fusarium sp. F37 translation elong... 87 4e-15
EU091055_1(EU091055|pid:none) Fusarium sp. F43 translation elong... 87 4e-15
DQ295147_1(DQ295147|pid:none) Fusarium sp. CCLZ-2005A isolate F0... 87 4e-15
BT071731_1(BT071731|pid:none) Picea sitchensis clone WS0443_M05 ... 87 4e-15
DQ986151_1(DQ986151|pid:none) Nectria haematococca mpI isolate 4... 87 4e-15
D32120_1(D32120|pid:none) Halobacterium halobium genes for elong... 87 4e-15
AY741758_1(AY741758|pid:none) Penicillium phoeniceum strain NRRL... 87 4e-15
FJ807250_1(FJ807250|pid:none) Rhynchomonas nasuta strain ATCC 50... 87 4e-15
EF452919_1(EF452919|pid:none) Fusarium sp. NRRL 43372 haplotype ... 87 4e-15
AK292639_1(AK292639|pid:none) Homo sapiens cDNA FLJ76726 complet... 87 4e-15
DQ295163_1(DQ295163|pid:none) Fusarium sp. CCLZ-2005B isolate F0... 87 4e-15
EF085539_1(EF085539|pid:none) Picea sitchensis clone WS02729_N03... 87 4e-15
DQ083545_1(DQ083545|pid:none) Danio rerio eukaryotic translation... 87 4e-15
(O42820) RecName: Full=Elongation factor 1-alpha; Short... 87 4e-15
EU091047_1(EU091047|pid:none) Fusarium sp. F23 translation elong... 87 4e-15
CP001142_85(CP001142|pid:none) Phaeodactylum tricornutum CCAP 10... 87 5e-15
DQ487322_1(DQ487322|pid:none) Fusarium oxysporum voucher VPRI 12... 87 5e-15
AF054510_1(AF054510|pid:none) Yarrowia lipolytica translation el... 87 5e-15
AY157315_1(AY157315|pid:none) Stevia rebaudiana elongation facto... 87 5e-15
DQ228328_1(DQ228328|pid:none) Solanum tuberosum clone 135G05 elo... 87 5e-15
DQ402371_1(DQ402371|pid:none) Gadus morhua eukaryotic elongation... 87 5e-15
S17434(S17434;S27130;S18002)translation elongation factor eEF-1 ... 87 5e-15
(P17786) RecName: Full=Elongation factor 1-alpha; Short... 87 5e-15
(P25698) RecName: Full=Elongation factor 1-alpha; Short... 87 5e-15
AY682093_1(AY682093|pid:none) Scleronephthya gracillimum transla... 87 5e-15
EU790565_1(EU790565|pid:none) Glycine max elongation factor-1A (... 87 5e-15
FB784723_1(FB784723|pid:none) Sequence 3996 from Patent WO200803... 87 5e-15
AF498320_1(AF498320|pid:none) Oncorhynchus mykiss elongation fac... 87 5e-15
BT058669_1(BT058669|pid:none) Salmo salar clone Contig3149 Elong... 87 5e-15
DQ294264_1(DQ294264|pid:none) Solanum tuberosum clone 131C12 elo... 87 5e-15
DQ407753_1(DQ407753|pid:none) Gymnadenia conopsea EF-1 alpha mRN... 87 5e-15
AB061263_1(AB061263|pid:none) Solanum tuberosum EF-1-alpha mRNA ... 87 5e-15
FJ890356_1(FJ890356|pid:none) Oncorhynchus tshawytscha elongatio... 87 5e-15
FN357318_33(FN357318|pid:none) Schistosoma mansoni genome sequen... 87 5e-15
FB784725_1(FB784725|pid:none) Sequence 3998 from Patent WO200803... 87 5e-15
DQ435339_1(DQ435339|pid:none) Fusarium oxysporum f. sp. vasinfec... 87 5e-15
BC080974_1(BC080974|pid:none) Xenopus tropicalis hypothetical LO... 86 7e-15
DQ138080_1(DQ138080|pid:none) Phytophthora parasitica isolate 14... 86 7e-15
(A3CTG3) RecName: Full=Elongation factor 1-alpha; Short... 86 7e-15
BC049512_1(BC049512|pid:none) Danio rerio wu:fi12b10, mRNA (cDNA... 86 7e-15
(Q40034) RecName: Full=Elongation factor 1-alpha; Short... 86 7e-15
A29820_1(A29820|pid:none) A.gossypi translation elongation facto... 86 9e-15
EU810332_1(EU810332|pid:none) Lotharella vacuolata translation e... 86 9e-15
(Q41011) RecName: Full=Elongation factor 1-alpha; Short... 86 9e-15
DQ177992_1(DQ177992|pid:none) Tithorea harmonia voucher V20 elon... 86 1e-14
EU810333_1(EU810333|pid:none) Lotharella vacuolata translation e... 86 1e-14
(Q00080) RecName: Full=Elongation factor 1-alpha; Short... 86 1e-14
D82573_1(D82573|pid:none) Schizosaccharomyces pombe mRNA for elo... 86 1e-14
AL844509_554(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 86 1e-14
DQ471426_1(DQ471426|pid:none) Litchi chinensis elongation factor... 86 1e-14
AP008210_2281(AP008210|pid:none) Oryza sativa (japonica cultivar... 85 2e-14
(Q9YAV0) RecName: Full=Elongation factor 1-alpha; Short... 85 2e-14
CP000081_413(CP000081|pid:none) Leishmania major chromosome 35, ... 85 2e-14
(P32769) RecName: Full=Elongation factor 1 alpha-like protein; ... 85 2e-14
X52977_1(X52977|pid:none) X.laevis mRNA for elongation factor 1-... 85 2e-14
(A7I656) RecName: Full=Elongation factor 1-alpha; Short... 84 3e-14
(A1RRJ3) RecName: Full=Elongation factor 1-alpha; Short... 84 3e-14
FB784763_1(FB784763|pid:none) Sequence 4036 from Patent WO200803... 84 3e-14
(O93729) RecName: Full=Elongation factor 1-alpha; Short... 84 3e-14
EU810329_1(EU810329|pid:none) Gymnochlora stellata translation e... 84 3e-14
AF136827_1(AF136827|pid:none) Zea mays clone e elongation factor... 84 3e-14
(A4YCR6) RecName: Full=Elongation factor 1-alpha; Short... 84 3e-14
X03688_1(X03688|pid:none) Mouse mRNA fragment for elongation fac... 84 3e-14
AY531940_1(AY531940|pid:none) Beauveria bassiana isolate 5718 tr... 84 3e-14
AF323391_1(AF323391|pid:none) Neotyphodium aotearoae 829 transla... 84 3e-14
FJ807268_1(FJ807268|pid:none) Trypanoplasma borreli strain Tt-JH... 84 3e-14
AB073631_1(AB073631|pid:none) Salsola komarovii skef-1A mRNA for... 84 3e-14
AF457503_1(AF457503|pid:none) Epichloe elymi strain ATCC 201554 ... 84 3e-14
AF457506_1(AF457506|pid:none) Epichloe amarillans isolate 906 tr... 84 3e-14
Y09023_1(Y09023|pid:none) G.cydonium mRNA for elongation factor ... 84 3e-14
AB458256_1(AB458256|pid:none) Marsupenaeus japonicus EF1-alpha m... 84 3e-14
AY185335_1(AY185335|pid:none) Trypanosoma brucei Hsp70 subfamily... 84 3e-14
(P41745) RecName: Full=Elongation factor 1-alpha; Short... 84 5e-14
FM992694_391(FM992694|pid:none) Candida dubliniensis CD36 chromo... 84 5e-14
AF128815_1(AF128815|pid:none) Oryzias latipes 42Sp50 mRNA, compl... 84 5e-14
AY582829_1(AY582829|pid:none) Acanthamoeba culbertsoni ef1a gene... 84 5e-14
AF323402_1(AF323402|pid:none) Neotyphodium australiense 937 tran... 84 5e-14
FB784609_1(FB784609|pid:none) Sequence 3882 from Patent WO200803... 84 5e-14
DQ073034_1(DQ073034|pid:none) Paititia neglecta isolate AW-02-12... 83 6e-14
EU686625_2(EU686625|pid:none) Uncultured marine crenarchaeote KM... 83 6e-14
AM270233_7(AM270233|pid:none) Aspergillus niger contig An11c0160... 83 6e-14
FB784607_1(FB784607|pid:none) Sequence 3880 from Patent WO200803... 83 6e-14
EF650417_1(EF650417|pid:none) Dioctria atricapillus elongation f... 83 6e-14
EU686642_15(EU686642|pid:none) Uncultured marine crenarchaeote S... 83 6e-14
DQ177924_1(DQ177924|pid:none) Brevioleria aelia voucher E-44-4 e... 83 8e-14
DQ177993_1(DQ177993|pid:none) Veladyris pardalis voucher E-45-1 ... 83 8e-14
DQ177958_1(DQ177958|pid:none) Mcclungia cymo voucher B-19-3 elon... 83 8e-14
DQ177962_1(DQ177962|pid:none) Megoleria susiana voucher AW-02-04... 83 8e-14
DQ177979_1(DQ177979|pid:none) Pseudoscada erruca voucher B-13-3 ... 83 8e-14
DQ177985_1(DQ177985|pid:none) Pteronymia teresita voucher E-29-1... 83 8e-14
EU686623_4(EU686623|pid:none) Uncultured marine crenarchaeote AD... 83 8e-14
(A3MV69) RecName: Full=Elongation factor 1-alpha; Short... 83 8e-14
DQ177959_1(DQ177959|pid:none) Mechanitis polymnia voucher B-15-2... 83 8e-14
DQ177930_1(DQ177930|pid:none) Dircenna dero voucher B-16-2 elong... 83 8e-14
DQ177926_1(DQ177926|pid:none) Ceratinia neso voucher RB324 elong... 83 8e-14
AB365126_1(AB365126|pid:none) Upogebia major mRNA for elongation... 83 8e-14
AY509104_1(AY509104|pid:none) Taygetis virgilia voucher DNA97-00... 82 1e-13
AY048275_1(AY048275|pid:none) Arabidopsis thaliana At1g07930/T6D... 82 1e-13
(Q8U152) RecName: Full=Elongation factor 1-alpha; Short... 82 1e-13
FB784651_1(FB784651|pid:none) Sequence 3924 from Patent WO200803... 82 1e-13
X99979_1(X99979|pid:none) Forsythia x intermedia factor 1-alpha ... 82 1e-13
AF022779_3(AF022779|pid:none) Methanococcoides methylutens ribos... 82 1e-13
AY338250_1(AY338250|pid:none) Pyrus pyrifolia clone 2 elongation... 82 1e-13
CU928170_747(CU928170|pid:none) Kluyveromyces thermotolerans str... 82 1e-13
AJ312397_1(AJ312397|pid:none) Sulfolobus solfataricus tef1 gene ... 82 1e-13
AF157236_1(AF157236|pid:none) Chaetocladium brefeldii translatio... 82 1e-13
Y08487_1(Y08487|pid:none) S.mansoni mRNA for elongation factor 1... 82 1e-13
AY531950_1(AY531950|pid:none) Beauveria bassiana isolate 7047 tr... 82 1e-13
EU742870_1(EU742870|pid:none) Amphidinium carterae strain CCMP13... 82 1e-13
AY509082_1(AY509082|pid:none) Cissia myncea voucher DNA99-009 el... 82 2e-13
M17878_1(M17878|pid:none) Mouse eEF-Tu gene encoding elongation ... 82 2e-13
AY509069_1(AY509069|pid:none) Euptychia westwoodi voucher DNA96-... 82 2e-13
DQ999840_1(DQ999840|pid:none) Monacrosporium drechsleri strain C... 82 2e-13
AY509094_1(AY509094|pid:none) Pareuptychia occirhoe voucher DNA9... 82 2e-13
AY509055_1(AY509055|pid:none) Chloreuptychia herseis voucher DNA... 82 2e-13
AY509087_1(AY509087|pid:none) Oressinoma sorata voucher DNA99-06... 82 2e-13
AY509057_1(AY509057|pid:none) Cissia penelope voucher DNA99-028 ... 82 2e-13
AY509066_1(AY509066|pid:none) Euptychoides albofasciata voucher ... 82 2e-13
AF157226_1(AF157226|pid:none) Absidia coerulea translation elong... 82 2e-13
AY509070_1(AY509070|pid:none) Forsterinaria inornata voucher DNA... 82 2e-13
AY509045_1(AY509045|pid:none) Cithaerias aurora voucher DNA99-03... 82 2e-13
AY509086_1(AY509086|pid:none) Melanitis leda voucher QL8 elongat... 82 2e-13
AF157238_1(AF157238|pid:none) Chlamydoabsidia padenii translatio... 82 2e-13
AY509098_1(AY509098|pid:none) Taygetis celia voucher DNA99-062 e... 82 2e-13
AY509052_1(AY509052|pid:none) Cepheuptychia cephus voucher DNA00... 82 2e-13
AF157282_1(AF157282|pid:none) Rhizomucor miehei translation elon... 82 2e-13
AY509054_1(AY509054|pid:none) Chloreuptychia arnaca voucher DNA9... 82 2e-13
AY509105_1(AY509105|pid:none) Taygetis sosis voucher DNA99-049 e... 82 2e-13
AY509073_1(AY509073|pid:none) Hermeuptychia sosybius voucher DNA... 82 2e-13
AY509103_1(AY509103|pid:none) Taygetis puritana voucher DNA99-08... 82 2e-13
AF157252_1(AF157252|pid:none) Gongronella butleri translation el... 82 2e-13

>(Q7YZN9) RecName: Full=Eukaryotic peptide chain release factor
GTP-binding subunit; AltName: Full=ERF2; AltName:
Full=Eukaryotic release factor 3; Short=ERF-3;
Short=ERF3; AltName: Full=Translation release
factor 3; AltName: Full=Polypeptide release factor 3;
&AY185331_1(AY185331|pid:none)
Length = 557

Score = 243 bits (620), Expect = 3e-62
Identities = 124/145 (85%), Positives = 124/145 (85%)
Frame = +1

Query: 2923 SVSSIKTEEDLENIKPTESVYXXXXXXXXXXXXXXXXXXXXXQVVKVLPEDSREHLNIVF 3102
SVSSIKTEEDLENIKPTESVY QVVKVLPEDSREHLNIVF
Sbjct: 63 SVSSIKTEEDLENIKPTESVYKVEDDDIEDDDEVDEVAEKIEQVVKVLPEDSREHLNIVF 122

Query: 3103 LGHVDAGKSTLSGSIMVLTGQVDPHTLAKYEREAKENHREGWIYAYIMDTNEEERTKGKT 3282
LGHVDAGKSTLSGSIMVLTGQVDPHTLAKYEREAKENHREGWIYAYIMDTNEEERTKGKT
Sbjct: 123 LGHVDAGKSTLSGSIMVLTGQVDPHTLAKYEREAKENHREGWIYAYIMDTNEEERTKGKT 182

Query: 3283 VEVGRAHFETTKKRYTILDAPGHRL 3357
VEVGRAHFETTKKRYTILDAPGHRL
Sbjct: 183 VEVGRAHFETTKKRYTILDAPGHRL 207

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 5,825,128,023
Number of extensions: 125822131
Number of successful extensions: 284406
Number of sequences better than 10.0: 5691
Number of HSP's gapped: 282353
Number of HSP's successfully gapped: 5700
Length of query: 1119
Length of database: 1,061,185,681
Length adjustment: 140
Effective length of query: 979
Effective length of database: 603,602,961
Effective search space: 590927298819
Effective search space used: 590927298819
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.79 gvh: 0.54 alm: 0.33 top: 0.53 tms: 0.00 mit: 0.30 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: nuclear
32.0 %: cytoplasmic
20.0 %: mitochondrial
4.0 %: cytoskeletal

>> prediction for Contig-U16527-1 is nuc

VS (DIR, S) 2
VH (FL, L) 21
VF (FL, S) 14
AH (FL, L) 9
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 3
SH (FL, L) 4
SF (FL, S) 5
CH (FL, L) 40
CF (FL, S) 4
FCL (DIR, L) 0
FC (DIR, S) 130
FC-IC (SUB) 126