Contig-U16527-1 |
Contig ID |
Contig-U16527-1 |
Contig update |
2004. 6.11 |
Contig sequence |
|
Gap |
no gap |
Contig length |
3358 |
Chromosome number (1..6, M) |
3 |
Chromosome length |
6358359 |
Start point |
854826 |
End point |
853802 |
Strand (PLUS/MINUS) |
MINUS |
Number of clones |
359 |
Number of EST |
278 |
Link to clone list |
U16527 |
List of clone(s) |
est1=AHA506F,1,590 est2=AHK528F,1,591 est3=AHL576F,1,594 est4=AHQ729F,1,589 est5=SHA661F,1,589 est6=SHH823F,1,589 est7=FC-BL16F,44,640 est8=FC-BL24F,44,643 est9=VHL415F,127,683 est10=VHF851F,140,537 est11=VHG142F,143,808 est12=FC-IC1071Z,203,870 est13=FC-IC0392E,262,870 est14=FC-IC0617F,262,870 est15=FC-IC0617Z,262,870 est16=FC-IC0770F,262,870 est17=FC-IC0770Z,262,870 est18=FC-IC1071F,262,870 est19=FC-IC1075E,262,870 est20=VHK855F,413,1062 est21=VHE244F,554,1148 est22=VHA586F,571,1161 est23=CHF747F,794,1221 est24=CHG692F,794,1421 est25=CHI773F,794,1419 est26=CHM837F,794,1391 est27=CHO248F,794,1433 est28=CHO803F,794,1195 est29=SFK164F,794,1450 est30=SFK216F,794,1449 est31=AHH496F,797,1395 est32=VFG294F,797,1396 est33=VHD583F,797,1331 est34=VHE381F,797,1396 est35=VHF289F,797,1369 est36=VHG238F,797,1396 est37=VHJ647F,797,1369 est38=CHJ566F,816,1395 est39=AHJ584F,819,1394 est40=VHK334F,819,1395 est41=AHG763F,892,1517 est42=VHM640F,893,1493 est43=VHE675F,905,1491 est44=VFD795F,908,1457 est45=VFG146F,926,1494 est46=VHA660F,1032,1356 est47=SLI272E,1045,1638 est48=VHC181F,1086,1627 est49=VHH888F,1190,1659 est50=AHA376F,1262,1848 est51=FC-BL16Z,1315,1968 est52=AHR192F,1366,1826 est53=VFN807F,1366,1939 est54=VFG308F,1404,1949 est55=VFO714F,1405,1906 est56=VFM891F,1441,2064 est57=VSJ507F,1445,1962 est58=VFO216F,1458,1996 est59=SFE142E,1513,2597 est60=VHF745F,1548,1783 est61=CFA138F,1572,2107 est62=SFC755F,1600,1790 est63=VFM557E,1607,2776 est64=FC-BL24Z,1769,1968 est65=VHL814F,1917,2541 est66=CHP418F,1928,2600 est67=CHP866F,1932,2598 est68=CHN437F,1936,2512 est69=CHJ380F,1937,2600 est70=CHI253F,1938,2562 est71=CHG782F,1939,2598 est72=CHJ289F,1943,2583 est73=CHI580F,1946,2602 est74=CHO450F,1946,2444 est75=CHO481F,1946,2591 est76=CHR474F,1946,2592 est77=CHO282F,1948,2582 est78=VFO216Z,1969,2668 est79=CHN729F,1970,2531 est80=VFG294Z,1973,2668 est81=CHG558F,1982,2601 est82=CHM837Z,1984,2251 est83=CHH227F,1993,2603 est84=CHL746F,1996,2162 est85=CHQ616F,1999,2668 est86=CHF453F,2001,2595 est87=VFG146Z,2002,2578 est88=VHA586Z,2004,2759 est89=VHE252F,2004,2632 est90=VFA578F,2015,2270 est91=VFK135F,2026,2609 est92=FC-AG24E,2032,2817 est93=CHQ493F,2034,2559 est94=CFA279E,2039,2736 est95=VHM640Z,2039,2773 est96=VFC822F,2041,2668 est97=CHH331F,2048,2680 est98=VHL415Z,2072,2772 est99=VHE244Z,2073,2776 est100=VHK855Z,2073,2778 est101=VFD795Z,2080,2777 est102=VFO714Z,2098,2775 est103=VFM891Z,2102,2762 est104=SFK584F,2109,2630 est105=VFG308Z,2112,2690 est106=CHR830F,2116,2696 est107=CHQ454F,2144,2668 est108=VSJ628Z,2163,2776 est109=CHI181F,2178,2760 est110=VSJ628F,2186,2740 est111=VHL564F,2187,2744 est112=CHK284F,2205,2504 est113=SSH822X,2218,2870 est114=SSJ116W,2225,2869 est115=CHM248F,2235,2826 est116=VFB624F,2235,2624 est117=SHL567F,2237,2831 est118=CHR441F,2270,2725 est119=CHJ278F,2298,2898 est120=FC-IC0411Z,2319,3032 est121=CHR147F,2331,2921 est122=CHH332F,2336,3000 est123=FC-IC0106F,2337,2805 est124=FC-IC1568F,2337,2673 est125=FC-IC1624Z,2337,2508 est126=FC-IC0102F,2338,2805 est127=FC-IC1216Z,2338,2805 est128=FC-IC0003F,2339,2806 est129=FC-IC0008F,2339,2805 est130=FC-IC0009F,2339,2805 est131=FC-IC0012F,2339,2805 est132=FC-IC0014F,2339,2805 est133=FC-IC0019F,2339,2805 est134=FC-IC0026F,2339,2805 est135=FC-IC0034F,2339,2805 est136=FC-IC0070F,2339,2805 est137=FC-IC0107F,2339,2805 est138=FC-IC0185E,2339,2805 est139=FC-IC0229E,2339,2805 est140=FC-IC0231E,2339,2805 est141=FC-IC0232E,2339,2805 est142=FC-IC0308E,2339,2805 est143=FC-IC0309E,2339,2805 est144=FC-IC0315E,2339,2805 est145=FC-IC0327E,2339,2805 est146=FC-IC0329E,2339,2805 est147=FC-IC0353E,2339,2805 est148=FC-IC0375Z,2339,2798 est149=FC-IC0416E,2339,2805 est150=FC-IC0418E,2339,2805 est151=FC-IC0457E,2339,2805 est152=FC-IC0458Z,2339,2805 est153=FC-IC0510E,2339,2805 est154=FC-IC0526E,2339,2805 est155=FC-IC0563F,2339,2499 est156=FC-IC0563Z,2339,2650 est157=FC-IC0579F,2339,2513 est158=FC-IC0591F,2339,2587 est159=FC-IC0604F,2339,2471 est160=FC-IC0710F,2339,2573 est161=FC-IC0735F,2339,2551 est162=FC-IC0750F,2339,2483 est163=FC-IC0759F,2339,2567 est164=FC-IC0867E,2339,2805 est165=FC-IC0869F,2339,2663 est166=FC-IC0869Z,2339,2805 est167=FC-IC0881F,2339,2542 est168=FC-IC0881Z,2339,2573 est169=FC-IC0882E,2339,2805 est170=FC-IC0914E,2339,2805 est171=FC-IC0929F,2339,2676 est172=FC-IC0947E,2339,2805 est173=FC-IC0957E,2339,2805 est174=FC-IC0959E,2339,2805 est175=FC-IC0962E,2339,2805 est176=FC-IC0965Z,2339,2805 est177=FC-IC0974F,2339,2626 est178=FC-IC0974Z,2339,2805 est179=FC-IC0986E,2339,2805 est180=FC-IC1009E,2339,2869 est181=FC-IC1013E,2339,2805 est182=FC-IC1065F,2339,2666 est183=FC-IC1069F,2339,2606 est184=FC-IC1098F,2339,2703 est185=FC-IC1102E,2339,2805 est186=FC-IC1110F,2339,2573 est187=FC-IC1122E,2339,2805 est188=FC-IC1127E,2339,2805 est189=FC-IC1142Z,2339,2602 est190=FC-IC1145F,2339,2593 est191=FC-IC1153E,2339,2805 est192=FC-IC1173E,2339,2805 est193=FC-IC1198E,2339,2805 est194=FC-IC1202E,2339,2805 est195=FC-IC1205E,2339,2805 est196=FC-IC1209E,2339,2805 est197=FC-IC1211E,2339,2805 est198=FC-IC1216F,2339,2602 est199=FC-IC1230E,2339,2805 est200=FC-IC1239E,2339,2805 est201=FC-IC1244Z,2339,2645 est202=FC-IC1260E,2339,2805 est203=FC-IC1261E,2339,2805 est204=FC-IC1264E,2339,2805 est205=FC-IC1265E,2339,2805 est206=FC-IC1268Z,2339,2602 est207=FC-IC1289E,2339,2805 est208=FC-IC1306E,2339,2805 est209=FC-IC1309F,2339,2483 est210=FC-IC1311E,2339,2805 est211=FC-IC1316F,2339,2668 est212=FC-IC1316Z,2339,2805 est213=FC-IC1324E,2339,2805 est214=FC-IC1335E,2339,2805 est215=FC-IC1384E,2339,2805 est216=FC-IC1390E,2339,2805 est217=FC-IC1400E,2339,2805 est218=FC-IC1439E,2339,2805 est219=FC-IC1465F,2339,2678 est220=FC-IC1476E,2339,2805 est221=FC-IC1486E,2339,2805 est222=FC-IC1498E,2339,2805 est223=FC-IC1508F,2339,2685 est224=FC-IC1508Z,2339,2805 est225=FC-IC1511E,2339,2805 est226=FC-IC1519E,2339,2805 est227=FC-IC1523E,2339,2805 est228=FC-IC1527E,2339,2805 est229=FC-IC1583E,2339,2805 est230=FC-IC1622E,2339,2805 est231=FC-IC1631E,2339,2805 est232=FC-IC1642E,2339,2805 est233=FC-IC1648E,2339,2805 est234=FC-IC1649E,2339,2805 est235=FC-IC1665E,2339,2805 est236=FC-IC1720F,2339,2480 est237=FC-IC1720Z,2339,2805 est238=FC-IC1748F,2339,2736 est239=FC-IC1760F,2339,2805 est240=FC-IC0282E,2340,2805 est241=FC-IC0562E,2340,2805 est242=FC-IC0893E,2340,2805 est243=FC-IC0965F,2340,2642 est244=FC-AA02Z,2354,2812 est245=FC-IC0861E,2375,2805 est246=CFG157F,2383,2994 est247=FC-IC1074Z,2404,2952 est248=FC-IC1728Z,2409,2805 est249=FC-IC1760Z,2409,2805 est250=VHD583Z,2431,3130 est251=CHE813F,2436,3072 est252=CHI561F,2438,3151 est253=SSB348W,2444,3087 est254=FC-IC1785Z,2471,2805 est255=FC-IC0929Z,2480,2805 est256=FC-IC0370Z,2487,2711 est257=VHF289Z,2493,3127 est258=VHE675Z,2498,3196 est259=CHF358F,2500,3196 est260=FC-IC1074F,2503,3055 est261=FC-IC1110Z,2505,2805 est262=FC-IC1753Z,2515,2805 est263=FC-IC1748Z,2518,2805 est264=FC-IC1145Z,2523,2805 est265=CFJ310F,2525,3126 est266=VFF245F,2528,2793 est267=VFF245Z,2528,2774 est268=FC-IC1098Z,2536,2805 est269=CHF747Z,2573,3358 est270=VHE381Z,2573,3257 est271=FC-IC0591Z,2577,2805 est272=FC-IC1268F,2580,2805 est273=CFA138Z,2581,3089 est274=SHJ412F,2581,2723 est275=FC-IC1764Z,2584,2805 est276=CHG662F,2615,3256 est277=FC-IC1735Z,2615,2805 est278=FC-IC1244F,2618,2805
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.23 |
Homology vs CSM-cDNA |
|
dna update |
2009. 4.11 |
Homology vs DNA |
Query= Contig-U16527-1 (Contig-U16527-1Q) /CSM_Contig/Contig-U16527-1Q.Seq.d (3358 letters)
Database: ddbj_A 102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(AY171066) Dictyostelium discoideum extrachromosomal palindr... 2694 0.0 4 (X00134) Dictyostelium discoideum 17S rRNA sequence. 1943 0.0 3 (K02641) Slime mold (D.discoideum) 17S small subunit ribosom... 1943 0.0 3 (AM168071) Dictyostelium discoideum 18S rRNA gene, isolate NC4. 1943 0.0 3 (AM168040) Dictyostelium discoideum 18S rRNA gene, isolate 9... 1683 0.0 4 (AM168038) Dictyostelium dimigraformum 18S rRNA gene, isolat... 1677 0.0 4 (DQ340385) Dictyostelium citrinum 17S ribosomal RNA, 5.8S ri... 1655 0.0 8 (AM168039) Dictyostelium discoideum 18S rRNA gene, isolate V34. 1655 0.0 4 (AM168033) Dictyostelium citrinum 18S rRNA gene, isolate OH494. 1647 0.0 4 (AM168044) Dictyostelium intermedium 18S rRNA gene, isolate ... 1643 0.0 4 (X00601) Dictyostelium discoideum ribosomal RNA gene. 1485 0.0 8 (AM168041) Dictyostelium firmibasis 18S rRNA gene, isolate T... 1445 0.0 5 (AY040331) Dictyostelium giganteum 18S ribosomal RNA gene, p... 1415 0.0 11 (AM168042) Dictyostelium giganteum 18S rRNA gene, isolate WS... 1415 0.0 8 (AM168031) Dictyostelium brunneum 18S rRNA gene, isolate WS700. 1400 0.0 8 (AM168065) Dictyostelium rosarium 18S rRNA gene, isolate M45. 1392 0.0 8 (AM168068) Dictyostelium sphaerocephalum 18S rRNA gene, isol... 1384 0.0 8 (AM168034) Dictyostelium clavatum 18S rRNA gene, isolate TNS... 1384 0.0 8 (AM168064) Dictyostelium robustum 18S rRNA gene, isolate TNS... 1368 0.0 8 (AM168035) Dictyostelium clavatum 18S rRNA gene, isolate TNS... 1368 0.0 8 (AM168050) Dictyostelium medium 18S rRNA gene, isolate TNS-C... 1352 0.0 10 (AM168043) Dictyostelium implicatum 18S rRNA gene, isolate 9... 1336 0.0 3 (AM168049) Dictyostelium macrocephalum 18S rRNA gene, isolat... 1332 0.0 3 (AU272101) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 1322 0.0 1 (BJ421615) Dictyostelium discoideum cDNA clone:ddv43c11, 5' ... 1320 0.0 1 (AM168030) Dictyostelium brefeldianum 18S rRNA gene, isolate... 1292 0.0 3 (AY040333) Dictyostelium mucoroides 18S ribosomal RNA gene, ... 1289 0.0 11 (AM168054) Dictyostelium mucoroides 18S rRNA gene, isolate S... 1285 0.0 3 (AM168032) Dictyostelium capitatum 18S rRNA gene, isolate 91... 1285 0.0 3 (BJ424509) Dictyostelium discoideum cDNA clone:ddv52n14, 5' ... 1285 0.0 1 (AM168028) Dictyostelium aureum 18S rRNA gene, isolate SL1. 1281 0.0 3 (BJ416454) Dictyostelium discoideum cDNA clone:ddv26a15, 5' ... 1279 0.0 1 (BJ369404) Dictyostelium discoideum cDNA clone:ddc50o12, 5' ... 1269 0.0 1 (BJ365576) Dictyostelium discoideum cDNA clone:ddc35g24, 5' ... 1245 0.0 1 (AM168055) Dictyostelium mucoroides var. stoloniferum 18S rR... 1243 0.0 11 (BJ416563) Dictyostelium discoideum cDNA clone:ddv26f24, 5' ... 1237 0.0 1 (AM168059) Dictyostelium pseudobrefeldianum 18S rRNA gene, i... 1233 0.0 4 (AM168037) Dictyostelium crassicaule 18S rRNA gene, isolate ... 1233 0.0 5 (BJ366646) Dictyostelium discoideum cDNA clone:ddc39b19, 5' ... 1233 0.0 1 (AM167876) Dictyostelium auroecephalum 18S rRNA gene, isolat... 1221 0.0 4 (FJ424862) Dictyostelium purpureum strain QSpu19 17S ribosom... 1217 0.0 5 (FJ424860) Dictyostelium purpureum strain QSpu35 17S ribosom... 1217 0.0 5 (FJ424859) Dictyostelium purpureum strain QSpu25 17S ribosom... 1217 0.0 5 (FJ424858) Dictyostelium purpureum strain QSpu34 17S ribosom... 1217 0.0 5 (FJ424856) Dictyostelium purpureum strain QSpu24 17S ribosom... 1217 0.0 5 (FJ424855) Dictyostelium purpureum strain QSpu22 17S ribosom... 1217 0.0 5 (FJ424854) Dictyostelium purpureum strain QSpu20 17S ribosom... 1217 0.0 5 (FJ424853) Dictyostelium purpureum strain QSpu18 17S ribosom... 1217 0.0 5 (FJ424852) Dictyostelium purpureum strain QSpu17 17S ribosom... 1217 0.0 5 (FJ424851) Dictyostelium purpureum strain QSpu16 17S ribosom... 1217 0.0 5 (FJ424850) Dictyostelium purpureum strain QSpu15 17S ribosom... 1217 0.0 5 (FJ424849) Dictyostelium purpureum strain QSpu14 17S ribosom... 1217 0.0 5 (FJ424848) Dictyostelium purpureum strain QSpu13 17S ribosom... 1217 0.0 5 (FJ424847) Dictyostelium purpureum strain QSpu12 17S ribosom... 1217 0.0 5 (FJ424846) Dictyostelium purpureum strain QSpu11 17S ribosom... 1217 0.0 5 (FJ424845) Dictyostelium purpureum strain QSpu10 17S ribosom... 1217 0.0 5 (FJ424844) Dictyostelium purpureum strain QSpu9 17S ribosoma... 1217 0.0 5 (FJ424843) Dictyostelium purpureum strain QSpu8 17S ribosoma... 1217 0.0 5 (FJ424842) Dictyostelium purpureum strain QSpu7 17S ribosoma... 1217 0.0 5 (FJ424841) Dictyostelium purpureum strain QSpu5 17S ribosoma... 1217 0.0 5 (FJ424840) Dictyostelium purpureum strain QSpu3 17S ribosoma... 1217 0.0 5 (FJ424839) Dictyostelium purpureum strain QSpu2 17S ribosoma... 1217 0.0 5 (AU272107) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 1205 0.0 1 (AU272106) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 1205 0.0 1 (AU271811) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 1205 0.0 1 (FJ424828) Dictyostelium purpureum strain QSpu36 17S ribosom... 1201 0.0 5 (FJ424827) Dictyostelium purpureum strain QSpu37 17S ribosom... 1201 0.0 5 (FJ424826) Dictyostelium purpureum strain QSpu4 17S ribosoma... 1201 0.0 5 (DQ340386) Dictyostelium purpureum 17S ribosomal RNA, 5.8S r... 1201 0.0 5 (AY040335) Dictyostelium purpureum 18S ribosomal RNA gene, p... 1201 0.0 6 (FJ424836) Dictyostelium purpureum strain QSpu28 17S ribosom... 1197 0.0 5 (FJ424835) Dictyostelium purpureum strain QSpu27 17S ribosom... 1197 0.0 5 (FJ424831) Dictyostelium purpureum strain QSpu21 17S ribosom... 1197 0.0 5 (BJ388382) Dictyostelium discoideum cDNA clone:dds9c11, 5' e... 1191 0.0 1 (BJ368609) Dictyostelium discoideum cDNA clone:ddc47j10, 5' ... 1185 0.0 1 (AM168067) Dictyostelium septentrionalis 18S rRNA gene, isol... 1181 0.0 1 (BJ420447) Dictyostelium discoideum cDNA clone:ddv39g12, 5' ... 1179 0.0 1 (BJ390110) Dictyostelium discoideum cDNA clone:dds21o04, 5' ... 1179 0.0 1 (BJ336697) Dictyostelium discoideum cDNA clone:dda54g19, 5' ... 1178 0.0 1 (AM168066) Dictyostelium septentrionalis 18S rRNA gene, isol... 1174 0.0 1 (BJ335992) Dictyostelium discoideum cDNA clone:dda52g07, 5' ... 1172 0.0 1 (AM168061) Dictyostelium purpureum 18S rRNA gene, isolate WS... 1170 0.0 5 (BJ418477) Dictyostelium discoideum cDNA clone:ddv32k21, 5' ... 1170 0.0 1 (BJ330603) Dictyostelium discoideum cDNA clone:dda32k01, 5' ... 1170 0.0 1 (BJ339159) Dictyostelium discoideum cDNA clone:dda64j07, 5' ... 1168 0.0 1 (BJ391896) Dictyostelium discoideum cDNA clone:dds25i16, 5' ... 1160 0.0 1 (BJ395526) Dictyostelium discoideum cDNA clone:dds39n06, 5' ... 1152 0.0 1 (BJ367136) Dictyostelium discoideum cDNA clone:ddc41c17, 5' ... 1150 0.0 1 (AU271735) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 1148 0.0 1 (BJ421110) Dictyostelium discoideum cDNA clone:ddv41a24, 5' ... 1136 0.0 1 (BJ417610) Dictyostelium discoideum cDNA clone:ddv28n02, 5' ... 1132 0.0 1 (AU271734) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 1128 0.0 1 (BJ390246) Dictyostelium discoideum cDNA clone:dds21o15, 5' ... 1122 0.0 2 (BJ424065) Dictyostelium discoideum cDNA clone:ddv51d09, 5' ... 1120 0.0 1 (BJ423790) Dictyostelium discoideum cDNA clone:ddv50m12, 5' ... 1116 0.0 1 (BJ421651) Dictyostelium discoideum cDNA clone:ddv43k10, 5' ... 1116 0.0 2 (BJ420580) Dictyostelium discoideum cDNA clone:ddv39b21, 5' ... 1116 0.0 2 (BJ413027) Dictyostelium discoideum cDNA clone:ddv13k24, 5' ... 1116 0.0 2 (AY040330) Dictyostelium firmibasis 18S ribosomal RNA gene, ... 1110 0.0 7 (BJ424673) Dictyostelium discoideum cDNA clone:ddv53n04, 5' ... 1104 0.0 1 (BJ334337) Dictyostelium discoideum cDNA clone:dda45p24, 5' ... 1100 0.0 2 (BJ412875) Dictyostelium discoideum cDNA clone:ddv13p01, 5' ... 1082 0.0 1 (BJ335584) Dictyostelium discoideum cDNA clone:dda50g21, 5' ... 1072 0.0 2 (AY040336) Dictyostelium sphaerocephalum 18S ribosomal RNA g... 1066 0.0 11 (AY040329) Dictyostelium dimigraformum 18S ribosomal RNA gen... 1061 0.0 7 (FJ424861) Dictyostelium purpureum strain QSpu31 17S ribosom... 1015 0.0 6 (FJ424832) Dictyostelium purpureum strain QSpu23 17S ribosom... 1009 0.0 6 (FJ424829) Dictyostelium purpureum strain QSpu1 17S ribosoma... 1009 0.0 6 (AY185331) Dictyostelium discoideum eukaryotic release facto... 1005 0.0 2 (BJ361371) Dictyostelium discoideum cDNA clone:ddc16m20, 5' ... 1005 0.0 2 (BJ328821) Dictyostelium discoideum cDNA clone:dda29m15, 5' ... 1005 0.0 2 (BJ325795) Dictyostelium discoideum cDNA clone:dda2f11, 5' e... 1005 0.0 2 (BJ389803) Dictyostelium discoideum cDNA clone:dds20j06, 5' ... 1001 0.0 2 (BJ326775) Dictyostelium discoideum cDNA clone:dda18a01, 5' ... 999 0.0 2 (BJ412355) Dictyostelium discoideum cDNA clone:ddv8h03, 5' e... 997 0.0 2 (AM168046) Dictyostelium laterosorum 18S rRNA gene, isolate ... 993 0.0 3 (BJ325798) Dictyostelium discoideum cDNA clone:dda2g11, 5' e... 989 0.0 2 (AY040340) Polysphondylium violaceum 18S ribosomal RNA gene,... 985 0.0 3 (AM168108) Polysphondylium violaceum 18S rRNA gene, isolate P6. 985 0.0 3 (FJ424830) Dictyostelium purpureum strain QSpu6 17S ribosoma... 981 0.0 10 (AU284808) Dictyostelium discoideum gamete cDNA clone:FC-BL1... 979 0.0 3 (FJ424833) Dictyostelium purpureum strain QSpu33 17S ribosom... 977 0.0 10 (BJ330521) Dictyostelium discoideum cDNA clone:dda31h19, 5' ... 973 0.0 2 (BJ323416) Dictyostelium discoideum cDNA clone:dda10b16, 5' ... 973 0.0 2 (BJ410435) Dictyostelium discoideum cDNA clone:ddv12d17, 5' ... 967 0.0 2 (FJ424857) Dictyostelium purpureum strain QSpu32 17S ribosom... 952 0.0 10 (BJ423187) Dictyostelium discoideum cDNA clone:ddv48h12, 5' ... 952 0.0 2 (FJ424838) Dictyostelium purpureum strain QSpu30 17S ribosom... 948 0.0 11 (BJ415831) Dictyostelium discoideum cDNA clone:ddv23k22, 5' ... 932 0.0 2 (BJ333974) Dictyostelium discoideum cDNA clone:dda44n15, 5' ... 928 0.0 2 (BJ425666) Dictyostelium discoideum cDNA clone:ddv56o10, 5' ... 926 0.0 2 (FJ424834) Dictyostelium purpureum strain QSpu29 17S ribosom... 920 0.0 10 (AM168073) Dictyostelium sp. menorah 18S rRNA gene, isolate M1. 910 0.0 11 (BJ326067) Dictyostelium discoideum cDNA clone:dda3n15, 5' e... 910 0.0 2 (BJ326136) Dictyostelium discoideum cDNA clone:dda15j12, 5' ... 908 0.0 2 (BJ328845) Dictyostelium discoideum cDNA clone:dda29c19, 5' ... 904 0.0 2 (BJ420898) Dictyostelium discoideum cDNA clone:ddv40e20, 5' ... 902 0.0 4 (AM168045) Dictyostelium lacteum 18S rRNA gene. 898 0.0 11 (AM168078) Dictyostelium gracile 18S rRNA gene, isolate TNS-... 892 0.0 13 (AM168075) Dictyostelium tenue 18S rRNA gene, isolate PR4. 890 0.0 14 (AM168063) Dictyostelium rhizopodium 18S rRNA gene, isolate ... 888 0.0 12 (AM168036) Dictyostelium coeruleo-stipes 18S rRNA gene, isol... 888 0.0 12 (AY040332) Dictyostelium minutum 18S ribosomal RNA gene, par... 884 0.0 13 (AM168076) Dictyostelium tenue 18S rRNA gene, isolate Pan52. 884 0.0 13 (AM168052) Dictyostelium monochasioides 18S rRNA gene, isola... 884 0.0 12 (AM168051) Dictyostelium minutum 18S rRNA gene, isolate 71-2. 884 0.0 10 (EU672875) Dictyostelium sp. MR-2008 18S ribosomal RNA gene,... 882 0.0 13 (AM168094) Dictyostelium tenue 18S rRNA gene, isolate PJ6. 882 0.0 12 (AM168029) Dictyostelium australe 18S rRNA gene, isolate NZ80B. 876 0.0 13 (AM168069) Dictyostelium potamoides 18S rRNA gene, isolate F... 874 0.0 11 (AM168062) Dictyostelium vinaceo-fuscum 18S rRNA gene, isola... 872 0.0 12 (AM168047) Dictyostelium lavandulum 18S rRNA gene, isolate B15. 872 0.0 12 (BJ412920) Dictyostelium discoideum cDNA clone:ddv13k11, 5' ... 852 0.0 2 (AU284817) Dictyostelium discoideum gamete cDNA clone:FC-BL2... 848 0.0 2 (AU284807) Dictyostelium discoideum gamete cDNA clone:FC-BL1... 844 0.0 2 (FJ424837) Dictyostelium purpureum strain QSpu26 17S ribosom... 837 0.0 10 (BJ424955) Dictyostelium discoideum cDNA clone:ddv54l04, 5' ... 829 0.0 2 (BJ400215) Dictyostelium discoideum cDNA clone:dds9c11, 3' e... 793 0.0 2 (AM168048) Dictyostelium longosporum 18S rRNA gene, isolate ... 779 0.0 9 (BJ435973) Dictyostelium discoideum cDNA clone:ddv29o04, 3' ... 731 0.0 2 (BJ431360) Dictyostelium discoideum cDNA clone:ddv13k24, 3' ... 724 0.0 2 (AM168060) Dictyostelium purpureum 18S rRNA gene, isolate C143. 714 0.0 4 (BJ389944) Dictyostelium discoideum cDNA clone:dds20k14, 5' ... 712 0.0 4 (BJ356426) Dictyostelium discoideum cDNA clone:dda60c12, 3' ... 706 0.0 2 (BJ431243) Dictyostelium discoideum cDNA clone:ddv13k11, 3' ... 666 0.0 2 (BJ437004) Dictyostelium discoideum cDNA clone:ddv32k21, 3' ... 664 0.0 2 (AU284274) Dictyostelium discoideum gamete cDNA clone:FC-AG2... 652 0.0 2 (BJ442893) Dictyostelium discoideum cDNA clone:ddv51d09, 3' ... 652 0.0 2 (BJ442608) Dictyostelium discoideum cDNA clone:ddv50m12, 3' ... 652 0.0 3 (BJ439066) Dictyostelium discoideum cDNA clone:ddv39g12, 3' ... 652 0.0 2 (BJ435336) Dictyostelium discoideum cDNA clone:ddv26f24, 3' ... 652 0.0 2 (BJ435225) Dictyostelium discoideum cDNA clone:ddv26a15, 3' ... 652 0.0 2 (BJ430824) Dictyostelium discoideum cDNA clone:ddv8n23, 3' e... 652 0.0 2 (BJ411876) Dictyostelium discoideum cDNA clone:ddv6l06, 5' e... 652 0.0 2 (BJ354808) Dictyostelium discoideum cDNA clone:dda54g19, 3' ... 652 0.0 2 (BJ354039) Dictyostelium discoideum cDNA clone:dda52g07, 3' ... 652 0.0 3 (AM168053) Dictyostelium mucoroides 18S rRNA gene, isolate T... 650 0.0 3 (BJ327413) Dictyostelium discoideum cDNA clone:dda20h11, 5' ... 646 0.0 2 (BJ424037) Dictyostelium discoideum cDNA clone:ddv51o02, 5' ... 642 0.0 2 (BJ331963) Dictyostelium discoideum cDNA clone:dda37a21, 5' ... 620 0.0 2 (BJ415058) Dictyostelium discoideum cDNA clone:ddv21e09, 5' ... 618 0.0 2 (BJ420522) Dictyostelium discoideum cDNA clone:ddv39g14, 5' ... 611 0.0 3 (AU272100) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 599 0.0 2 (AU271812) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 599 0.0 2 (BJ358514) Dictyostelium discoideum cDNA clone:ddc1m20, 5' e... 589 0.0 2 (DQ340387) Dictyostelium polycephalum 17S ribosomal RNA, 5.8... 533 0.0 14 (AM168056) Dictyostelium polycephalum 18S rRNA gene, isolate... 533 0.0 13 (BJ443359) Dictyostelium discoideum cDNA clone:ddv52n14, 3' ... 529 0.0 3 (AY040338) Polysphondylium pallidum 18S ribosomal RNA gene, ... 488 0.0 13 (AM168106) Polysphondylium tikaliensis 18S rRNA gene, isolat... 488 0.0 13 (AM168103) Polysphondylium pallidum 18S rRNA gene, isolate T... 488 0.0 13 (AM168102) Polysphondylium sp. arachnoideum 18S rRNA gene, i... 488 0.0 13 (AM168099) Polysphondylium equisetoides 18S rRNA gene, isola... 488 0.0 13 (AM168098) Polysphondylium colligatum 18S rRNA gene, isolate... 488 0.0 14 (AY040334) Dictyostelium polycephalum 18S ribosomal RNA gene... 484 0.0 14 (AM168112) Acytostelium ellipticum 18S rRNA gene, isolate AE2. 480 0.0 12 (AM168077) Dictyostelium caveatum 18S rRNA gene, isolate WS695. 476 0.0 11 (AM168100) Polysphondylium filamentosum 18S rRNA gene, isola... 474 0.0 13 (EU004605) Polysphondylium pallidum strain PPHU8 small subun... 472 0.0 13 (DQ340388) Polysphondylium pallidum 17S ribosomal RNA, 5.8S ... 472 0.0 13 (AY040339) Polysphondylium tenuissimum 18S ribosomal RNA gen... 472 0.0 16 (AY040337) Polysphondylium candidum 18S ribosomal RNA gene, ... 472 0.0 15 (AM168105) Polysphondylium tenuissimum 18S rRNA gene, isolat... 472 0.0 13 (AM168101) Polysphondylium luridum 18S rRNA gene, isolate LR-2. 472 0.0 13 (AM168097) Polysphondylium asymetricum 18S rRNA gene, isolat... 472 0.0 13 (AM168074) Dictyostelium gloeosporum 18S rRNA gene, isolate ... 472 0.0 14 (BJ443522) Dictyostelium discoideum cDNA clone:ddv53n04, 3' ... 466 0.0 4 (AM168107) Polysphondylium pseudocandidum 18S rRNA gene, iso... 464 0.0 13 (AM168104) Polysphondylium pallidum 18S rRNA gene, isolate P... 464 0.0 13 (AM168096) Polysphondylium anisocaule 18S rRNA gene, isolate... 464 0.0 13 (AM168110) Acytostelium subglobosum 18S rRNA gene, isolate LB1. 462 0.0 15 (AM168115) Acytostelium anastomosans 18S rRNA gene, isolate ... 460 0.0 13 (AM168111) Acytostelium leptosomum 18S rRNA gene, isolate FG12. 460 0.0 13 (AM168109) Acytostelium longisorophorum 18S rRNA gene, isola... 460 0.0 14 (AM168057) Dictyostelium polycarpum 18S rRNA gene, isolate V... 460 0.0 13 (AM168113) Acytostelium serpentarium 18S rRNA gene, isolate ... 456 0.0 13 (AM168079) Dictyostelium oculare 18S rRNA gene, isolate DB4B. 456 0.0 12 (AM168058) Dictyostelium polycarpum 18S rRNA gene, isolate O... 452 0.0 13 (AM168114) Acytostelium digitatum 18S rRNA gene, isolate OH517. 446 0.0 14 (BJ444463) Dictyostelium discoideum cDNA clone:ddv56o10, 3' ... 444 0.0 5 (AM168084) Dictyostelium bifurcatum 18S rRNA gene, isolate UK5. 400 0.0 15 (AM168095) Dictyostelium aureostipes var. helvetium 18S rRNA... 392 0.0 14 (AM168089) Dictyostelium mexicanum 18S rRNA gene, isolate Me... 392 0.0 14 (AM168088) Dictyostelium medusoides 18S rRNA gene, isolate O... 392 0.0 15 (AM168081) Dictyostelium sp. stellarum 18S rRNA gene, isolat... 392 0.0 14 (AM168072) Dictyostelium granulophorum 18S rRNA gene, isolat... 392 0.0 15 (DQ340389) Dictyostelium fasciculatum 17S ribosomal RNA, 5.8... 385 0.0 14 (AY040328) Dictyostelium aureostipes 18S ribosomal RNA gene,... 385 0.0 15 (AM168093) Dictyostelium delicatum 18S rRNA gene, isolate TN... 385 0.0 14 (AM168087) Dictyostelium fasciculatum 18S rRNA gene, isolate... 385 0.0 14 (AM168083) Dictyostelium aureostipes 18S rRNA gene, isolate ... 385 0.0 14 (AM168082) Dictyostelium aureostipes 18S rRNA gene, isolate ... 385 0.0 15 (AM168080) Dictyostelium sp. antarticum 18S rRNA gene, isola... 385 0.0 14 (AM168092) Dictyostelium deminutivum 18S rRNA gene, isolate ... 381 0.0 14 (AM168091) Dictyostelium parvisporum 18S rRNA gene, isolate ... 375 0.0 15 (AM168090) Dictyostelium microsporum 18S rRNA gene, isolate ... 371 0.0 15 (AM168085) Dictyostelium exiguum 18S rRNA gene, isolate TNS-... 363 0.0 15 (U07416) Acanthamoeba castellanii Neff ATCC 50373 18S rRNA g... 262 0.0 17 (U07415) Acanthamoeba polyphaga JAC/S2 ATCC 50372 18S rRNA g... 262 0.0 17 (U07414) Acanthamoeba castellanii Ma ATCC 50370 18S rRNA gene. 262 0.0 17 (U07413) Acanthamoeba castellanii Castellani ATCC 50374 18S ... 262 0.0 17 (U07411) Acanthamoeba palestinensis Reich ATCC 30870 18S rRN... 262 0.0 17 (U07410) Acanthamoeba sp. ATCC 50497 18S ribosomal RNA gene,... 262 0.0 18 (U07409) Acanthamoeba sp. ATCC 50369 18S ribosomal RNA gene,... 262 0.0 17 (U07408) Acanthamoeba sp. ATCC 50496 18S ribosomal RNA gene,... 262 0.0 17 (U07407) Acanthamoeba polyphaga BCM:0173:16 ATCC 50371 18S r... 262 0.0 17 (U07406) Acanthamoeba rhysodes BCM:0685:116 ATCC 50368 18S r... 262 0.0 17 (U07404) Acanthamoeba sp. ATCC 50498 18S ribosomal RNA gene,... 262 0.0 17 (U07403) Acanthamoeba castellanii CDC:0786:V042 18S rRNA gene. 262 0.0 17 (U07402) Acanthamoeba polyphaga CDC:0884:V029 18S rRNA gene. 262 0.0 17 (U07400) Acanthamoeba castellanii CDC:0981:V006 18S rRNA gene. 262 0.0 17 (M13435) A.castellanii mature small subunit rRNA gene, compl... 262 0.0 17 (L09599) Acanthamoeba palestinensis small subunit ribosomal ... 262 0.0 17 (EF140638) Acanthamoeba sp. KA/E22 18S ribosomal RNA gene, c... 262 0.0 17 (EF140629) Acanthamoeba sp. KA/E28 18S ribosomal RNA gene, c... 262 0.0 17 (EF140628) Acanthamoeba sp. KA/E27 18S ribosomal RNA gene, c... 262 0.0 17 (EF140627) Acanthamoeba sp. KA/E26 18S ribosomal RNA gene, c... 262 0.0 17 (EF140625) Acanthamoeba sp. KA/E23 18S ribosomal RNA gene, c... 262 0.0 17 (DQ992193) Acanthamoeba sp. EFW9 18S ribosomal RNA gene, par... 262 0.0 17 (DQ992190) Acanthamoeba sp. EFW16 18S ribosomal RNA gene, pa... 262 0.0 17 (AY173011) Acanthamoeba sp. KA/MSG27 18S ribosomal RNA gene,... 262 0.0 17 (AY173010) Acanthamoeba sp. KA/MSG26 18S ribosomal RNA gene,... 262 0.0 17 (AY173009) Acanthamoeba sp. KA/MSG18 18S ribosomal RNA gene,... 262 0.0 18 (AY173008) Acanthamoeba sp. KA/MSG16 18S ribosomal RNA gene,... 262 0.0 17 (AY173007) Acanthamoeba sp. KA/MSG15 18S ribosomal RNA gene,... 262 0.0 17 (AY173005) Acanthamoeba sp. KA/MSG10 18S ribosomal RNA gene,... 262 0.0 17 (AY173004) Acanthamoeba sp. KA/MSG4 18S ribosomal RNA gene, ... 262 0.0 17 (AY173002) Acanthamoeba sp. KA/MSG1 18S ribosomal RNA gene, ... 262 0.0 17 (AY173001) Acanthamoeba sp. KA/MSS8-2 18S ribosomal RNA gene... 262 0.0 17 (AY148964) Acanthamoeba sp. KA/E18 18S ribosomal RNA gene, c... 262 0.0 16 (AY148958) Acanthamoeba sp. KA/E11 18S ribosomal RNA gene, c... 262 0.0 17 (AY148957) Acanthamoeba sp. KA/E10 18S ribosomal RNA gene, c... 262 0.0 17 (AY148956) Acanthamoeba sp. KA/E8 18S ribosomal RNA gene, co... 262 0.0 17 (AM408802) Acanthamoeba sp. EIDS3 partial 18S rRNA gene. 262 0.0 16 (AF333609) Acanthamoeba sp. PN13 small subunit ribosomal RNA... 262 0.0 17 (AF333607) Acanthamoeba sp. PN15 small subunit ribosomal RNA... 262 0.0 16 (AF114438) Acanthamoeba castellanii 18S ribosomal RNA gene, ... 262 0.0 17 (AY148960) Acanthamoeba sp. KA/E14 18S ribosomal RNA gene, c... 258 0.0 17 (AY033896) Comandonia operculata small subunit ribosomal RNA... 258 0.0 17 (AY172999) Acanthamoeba sp. KA/MSS1 18S ribosomal RNA gene, ... 254 0.0 17 (AF349044) Acanthamoeba sp. KA/E6 18S ribosomal RNA gene, co... 254 0.0 17 (AF316545) Acanthamoeba sp. KA/E12 18S ribosomal RNA gene, c... 254 0.0 17 (EF025003) Uncultured eukaryote clone Elev_18S_4931 18S ribo... 254 0.0 17 (EF024050) Eimeriidae environmental sample clone Amb_18S_153... 254 0.0 17 (EF024024) Eimeriidae environmental sample clone Amb_18S_150... 254 0.0 17 (EF024019) Eimeriidae environmental sample clone Amb_18S_149... 254 0.0 17 (EF024000) Eimeriidae environmental sample clone Amb_18S_147... 254 0.0 17 (EF023967) Eimeriidae environmental sample clone Amb_18S_143... 254 0.0 17 (EF023935) Phaseoleae environmental sample clone Amb_18S_139... 254 0.0 17 (EF023842) Phaseoleae environmental sample clone Amb_18S_129... 254 0.0 17 (EF023775) Phaseoleae environmental sample clone Amb_18S_121... 254 0.0 17 (EF023767) Phaseoleae environmental sample clone Amb_18S_120... 254 0.0 17 (EF023700) Uncultured Closteriaceae clone Amb_18S_970 18S ri... 254 0.0 17 (EF023392) Phaseoleae environmental sample clone Amb_18S_727... 254 0.0 17 (EF023355) Phaseoleae environmental sample clone Amb_18S_681... 254 0.0 17 (EF023270) Eimeriidae environmental sample clone Amb_18S_576... 254 0.0 17 (EF023252) Uncultured Desmidiaceae clone Amb_18S_556 18S rib... 254 0.0 17 (EF023246) Eimeriidae environmental sample clone Amb_18S_548... 254 0.0 17 (AY173000) Acanthamoeba sp. KA/MSS8-1 18S ribosomal RNA gene... 226 0.0 18 (AF316547) Acanthamoeba triangularis 18S ribosomal RNA gene,... 178 0.0 18 (BJ390291) Dictyostelium discoideum cDNA clone:dds21k24, 5' ... 876 0.0 3 (BJ325057) Dictyostelium discoideum cDNA clone:dda9p11, 5' e... 910 0.0 2 (BJ326477) Dictyostelium discoideum cDNA clone:dda16j15, 5' ... 908 0.0 2 (BJ425119) Dictyostelium discoideum cDNA clone:ddv54o15, 5' ... 799 0.0 2 (BJ436153) Dictyostelium discoideum cDNA clone:ddv30l03, 3' ... 476 0.0 3 (BJ412534) Dictyostelium discoideum cDNA clone:ddv8n23, 5' e... 896 0.0 2 (BJ417037) Dictyostelium discoideum cDNA clone:ddv29o04, 5' ... 1068 0.0 1 (BJ373201) Dictyostelium discoideum cDNA clone:ddc1m20, 3' e... 478 0.0 4 (AF005995) Acanthamoeba lugdunensis 18S ribosomal RNA gene, ... 262 0.0 18 (DQ992192) Acanthamoeba sp. EFW7 18S ribosomal RNA gene, par... 135 0.0 18 (AY148961) Acanthamoeba sp. KA/E15 18S ribosomal RNA gene, c... 242 0.0 17 (AU271566) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 716 0.0 3 (U07405) Acanthamoeba castellanii CDC:0180:1 18S rRNA gene. 256 0.0 17 (AM408800) Acanthamoeba sp. EI5 partial 18S rRNA gene. 262 0.0 17 (EF023186) Caprifoliaceae environmental sample clone Amb_18S... 246 0.0 17 (EF024906) Phaseoleae environmental sample clone Elev_18S_14... 238 0.0 17 (EF024889) Phaseoleae environmental sample clone Elev_18S_14... 238 0.0 17 (EF024757) Phaseoleae environmental sample clone Elev_18S_12... 238 0.0 17 (EF024482) Phaseoleae environmental sample clone Elev_18S_77... 238 0.0 17 (AY173015) Acanthamoeba sp. KA/MSS7 18S ribosomal RNA gene, ... 262 0.0 17 (DQ992189) Acanthamoeba sp. EFW15 18S ribosomal RNA gene, pa... 262 0.0 18 (DQ992188) Acanthamoeba sp. EFW12 18S ribosomal RNA gene, pa... 262 0.0 18 (DQ992187) Acanthamoeba sp. EFW11 18S ribosomal RNA gene, pa... 262 0.0 18 (DQ992186) Acanthamoeba sp. EFW3 18S ribosomal RNA gene, par... 262 0.0 18 (EF025035) Uncultured eukaryote clone Elev_18S_7101 18S ribo... 254 0.0 17 (AF333608) Acanthamoeba sp. PN14 small subunit ribosomal RNA... 262 0.0 17 (BJ358402) Dictyostelium discoideum cDNA clone:ddc1k09, 5' e... 1055 0.0 1 (AY173003) Acanthamoeba sp. KA/MSG3 18S ribosomal RNA gene, ... 137 0.0 19 (BJ323870) Dictyostelium discoideum cDNA clone:dda12l18, 5' ... 846 0.0 2 (BJ431197) Dictyostelium discoideum cDNA clone:ddv13p01, 3' ... 630 0.0 2 (EF024637) Phaseoleae environmental sample clone Elev_18S_95... 254 0.0 17 (EF024412) Phaseoleae environmental sample clone Elev_18S_10... 254 0.0 17 (EF024405) Phaseoleae environmental sample clone Elev_18S_10... 254 0.0 17 (AY148963) Acanthamoeba sp. KA/E17 18S ribosomal RNA gene, c... 262 0.0 18 (BJ362330) Dictyostelium discoideum cDNA clone:ddc21h07, 5' ... 844 0.0 2 (BJ328777) Dictyostelium discoideum cDNA clone:dda29p08, 5' ... 844 0.0 2 (EF140626) Acanthamoeba sp. KA/E25 18S ribosomal RNA gene, c... 262 0.0 17 (AF005998) Acanthamoeba sp. KA/E2 18S ribosomal RNA gene, co... 262 0.0 17 (AY148959) Acanthamoeba sp. KA/E13 18S ribosomal RNA gene, c... 254 0.0 18 (BJ390260) Dictyostelium discoideum cDNA clone:dds21b23, 5' ... 842 0.0 2 (U07417) Acanthamoeba royreba Oak Ridge ATCC 30884 18S rRNA ... 262 0.0 17 (AM408801) Acanthamoeba sp. EI6 partial 18S rRNA gene. 250 0.0 17 (EF023229) Eimeriidae environmental sample clone Amb_18S_530... 254 0.0 17 (EF140639) Acanthamoeba sp. KA/E24 18S ribosomal RNA gene, c... 254 0.0 17 (AY148955) Acanthamoeba sp. KA/E7 18S ribosomal RNA gene, co... 262 0.0 18 (BJ420278) Dictyostelium discoideum cDNA clone:ddv38e21, 5' ... 1045 0.0 1 (BJ327545) Dictyostelium discoideum cDNA clone:dda20g21, 5' ... 846 0.0 2 (AY148962) Acanthamoeba sp. KA/E16 18S ribosomal RNA gene, c... 232 0.0 17 (EF023113) Nucleariidae environmental sample clone Amb_18S_3... 254 0.0 17 (EF023386) Eimeriidae environmental sample clone Amb_18S_721... 254 0.0 17 (EF024062) Uncultured eukaryote clone Amb_18S_4821 18S ribos... 238 0.0 17 (EF024956) Phaseoleae environmental sample clone Elev_18S_14... 238 0.0 17 (EF024089) Uncultured eukaryote clone Amb_18S_6741 18S ribos... 238 0.0 17 (AM408799) Acanthamoeba sp. EI4 partial 18S rRNA gene. 226 0.0 18 (EF023223) Eimeriidae environmental sample clone Amb_18S_522... 254 0.0 17 (EF024478) Phaseoleae environmental sample clone Elev_18S_77... 238 0.0 17 (BJ421559) Dictyostelium discoideum cDNA clone:ddv43g06, 5' ... 837 0.0 2 (BJ412443) Dictyostelium discoideum cDNA clone:ddv8a15, 5' e... 837 0.0 2 (BJ412285) Dictyostelium discoideum cDNA clone:ddv7p14, 5' e... 837 0.0 2 (BJ410284) Dictyostelium discoideum cDNA clone:ddv11m24, 5' ... 837 0.0 2 (BJ323732) Dictyostelium discoideum cDNA clone:dda12b01, 5' ... 837 0.0 2 (BJ412930) Dictyostelium discoideum cDNA clone:ddv13p08, 5' ... 837 0.0 2 (AY173012) Acanthamoeba sp. KA/MSG29 18S ribosomal RNA gene,... 262 0.0 17 (EF023210) Nucleariidae environmental sample clone Amb_18S_5... 254 0.0 17 (EF023564) Eimeriidae environmental sample clone Amb_18S_786... 246 0.0 17 (BJ420282) Dictyostelium discoideum cDNA clone:ddv38f19, 5' ... 835 0.0 2 (BJ413076) Dictyostelium discoideum cDNA clone:ddv14h06, 5' ... 835 0.0 2 (BJ427673) Dictyostelium discoideum cDNA clone:ddv63p02, 5' ... 835 0.0 2 (EF023285) Eimeriidae environmental sample clone Amb_18S_595... 254 0.0 17 (EF024971) Eimeriidae environmental sample clone Elev_18S_15... 220 0.0 16 (S81337) 18S rRNA [Acanthamoeba griffini, H37, Genomic, 2781... 262 0.0 17 (U07412) Acanthamoeba griffini S-7 ATCC 30731 18S rRNA gene. 262 0.0 17 (EU349230) Apusomonadidae sp. micra strain Millport 18S ribo... 234 0.0 15 (BJ330179) Dictyostelium discoideum cDNA clone:dda27k16, 5' ... 833 0.0 2 (EF024952) Eimeriidae environmental sample clone Elev_18S_14... 246 0.0 17 (EF023571) Aristolochiaceae environmental sample clone Amb_1... 230 0.0 17 (BJ419319) Dictyostelium discoideum cDNA clone:ddv35a21, 5' ... 537 0.0 2 (AY176047) Acanthamoeba sp. KA/MSG23 18S ribosomal RNA gene,... 236 0.0 19 (EF024885) Eimeriidae environmental sample clone Elev_18S_14... 238 0.0 16 (BJ326859) Dictyostelium discoideum cDNA clone:dda18e07, 5' ... 839 0.0 2 (AM408796) Acanthamoeba sp. EI1 partial 18S rRNA gene. 254 0.0 16 (EF023601) Eimeriidae environmental sample clone Amb_18S_837... 246 0.0 17 (EF024784) Eimeriidae environmental sample clone Elev_18S_12... 270 0.0 16 (EF024313) Nucleariidae environmental sample clone Elev_18S_... 270 0.0 16 (EF024574) Tofieldiaceae environmental sample clone Elev_18S... 238 0.0 16 (EF024222) Phaseoleae environmental sample clone Elev_18S_57... 238 0.0 16 (EF024059) Uncultured eukaryote clone Amb_18S_4341 18S ribos... 238 0.0 16 (BJ362829) Dictyostelium discoideum cDNA clone:ddc23m18, 5' ... 835 0.0 2 (EF023160) Uncultured Sarcosomataceae clone Amb_18S_450 18S ... 254 0.0 17 (EF023979) Eimeriidae environmental sample clone Amb_18S_145... 246 0.0 17 (EF023973) Eimeriidae environmental sample clone Amb_18S_144... 246 0.0 17 (EF023607) Eimeriidae environmental sample clone Amb_18S_845... 246 0.0 17 (EF023476) Eimeriidae environmental sample clone Amb_18S_106... 246 0.0 17 (EF023384) Eimeriidae environmental sample clone Amb_18S_719... 246 0.0 17 (EF023929) Eimeriidae environmental sample clone Amb_18S_138... 246 0.0 17 (EF024959) Tofieldiaceae environmental sample clone Elev_18S... 238 0.0 16 (BJ348085) Dictyostelium discoideum cDNA clone:dda32k01, 3' ... 644 0.0 2 (EF023944) Phaseoleae environmental sample clone Amb_18S_140... 240 0.0 16 (EF023942) Phaseoleae environmental sample clone Amb_18S_140... 240 0.0 16 (EF023932) Phaseoleae environmental sample clone Amb_18S_139... 240 0.0 16 (EF023926) Phaseoleae environmental sample clone Amb_18S_138... 240 0.0 16 (EF023897) Phaseoleae environmental sample clone Amb_18S_135... 240 0.0 16 (EF023891) Phaseoleae environmental sample clone Amb_18S_134... 240 0.0 16 (EF023797) Phaseoleae environmental sample clone Amb_18S_124... 240 0.0 16 (EF023681) Phaseoleae environmental sample clone Amb_18S_942... 240 0.0 16 (EF023674) Phaseoleae environmental sample clone Amb_18S_934... 240 0.0 16 (EF023172) Phaseoleae environmental sample clone Amb_18S_463... 240 0.0 16 (EF023167) Eimeriidae environmental sample clone Amb_18S_457... 234 0.0 16 (EF024843) Eimeriidae environmental sample clone Elev_18S_13... 246 0.0 17 (EF024835) Eimeriidae environmental sample clone Elev_18S_13... 246 0.0 17 (X54866) S. pombe mRNA for 16S-like ribosomal RNA. 234 0.0 16 (EF024037) Eimeriidae environmental sample clone Amb_18S_151... 234 0.0 16 (EF023893) Eimeriidae environmental sample clone Amb_18S_134... 234 0.0 16 (EF023744) Eimeriidae environmental sample clone Amb_18S_118... 234 0.0 16 (EF023662) Eimeriidae environmental sample clone Amb_18S_916... 234 0.0 16 (EF023618) Eimeriidae environmental sample clone Amb_18S_860... 234 0.0 16 (EF023496) Eimeriidae environmental sample clone Amb_18S_108... 234 0.0 16 (EF023195) Eimeriidae environmental sample clone Amb_18S_488... 234 0.0 16 (EF023187) Acanthamoeba environmental sample clone Amb_18S_4... 234 0.0 16 (EF023146) Acanthamoeba environmental sample clone Amb_18S_4... 234 0.0 16 (AF368504) Basidiobolus haptosporus small subunit ribosomal ... 230 0.0 16 (BJ329903) Dictyostelium discoideum cDNA clone:dda26n16, 5' ... 837 0.0 2 (Y19155) Amoebidium parasiticum 18S rRNA gene, strain ATCC 3... 222 0.0 19 (EF023583) Uncultured Sarcosomataceae clone Amb_18S_810 18S ... 254 0.0 17 (X70803) G.nostochinearum gene for 16S-like ribosomal RNA. 198 0.0 19 (BJ329370) Dictyostelium discoideum cDNA clone:dda24a23, 5' ... 720 0.0 3 (AY251633) Schizosaccharomyces pombe isolate DR2 18S ribosom... 238 0.0 15 (EF140633) Acanthamoeba sp. KA/E21 18S ribosomal RNA gene, c... 262 0.0 18 (EF023144) Phaseoleae environmental sample clone Amb_18S_432... 240 0.0 16 (AU270027) Dictyostelium discoideum vegetative cDNA clone:VS... 1027 0.0 1 (AY148954) Acanthamoeba sp. KA/E5 18S ribosomal RNA gene, co... 262 0.0 17 (EF024480) Eimeriidae environmental sample clone Elev_18S_77... 246 0.0 17 (EF023558) Eimeriidae environmental sample clone Amb_18S_778... 246 0.0 17 (EF023617) Aristolochiaceae environmental sample clone Amb_1... 230 0.0 17 (EF023497) Aristolochiaceae environmental sample clone Amb_1... 230 0.0 17 (EF023125) Phytolaccaceae environmental sample clone Amb_18S... 230 0.0 17 (AF019069) Acanthamoeba stevensoni RB:F:1 18S ribosomal RNA ... 262 0.0 17 (AM168086) Dictyostelium fasciculatum 18S rRNA gene, isolate... 188 0.0 18 (AF019068) Acanthamoeba hatchetti BH-2 18S ribosomal RNA gen... 262 0.0 17 (AF285277) Acanthamoeba sp. KO99 18S small subunit ribosomal... 270 0.0 17 (DQ185605) Acanthamoeba sp. PJ small subunit ribosomal RNA g... 262 0.0 18 (EF024034) Phaseoleae environmental sample clone Amb_18S_151... 240 0.0 16 (BJ323454) Dictyostelium discoideum cDNA clone:dda10l15, 5' ... 819 0.0 2 (DQ244031) Uncultured marine alveolate clone PAF8AU2004 18S ... 208 0.0 16 (EF023203) Eimeriidae environmental sample clone Amb_18S_498... 254 0.0 18 (Y16013) Moerckia flotoviana 18S rRNA gene. 232 0.0 16 (EF023142) Eimeriidae environmental sample clone Amb_18S_430... 236 0.0 17 (BJ326158) Dictyostelium discoideum cDNA clone:dda15b15, 5' ... 837 0.0 2 (BJ362529) Dictyostelium discoideum cDNA clone:ddc22d09, 5' ... 817 0.0 2 (BJ328503) Dictyostelium discoideum cDNA clone:dda28m12, 5' ... 817 0.0 2 (BJ323456) Dictyostelium discoideum cDNA clone:dda10m13, 5' ... 817 0.0 2 (BJ323438) Dictyostelium discoideum cDNA clone:dda10h16, 5' ... 817 0.0 2 (AY050182) Amastigomonas mutabilis 18S ribosomal RNA gene, p... 218 0.0 17 (DQ992184) Acanthamoeba sp. EFW2 18S ribosomal RNA gene, par... 262 0.0 17 (AF100946) Mycale fibrexilis 18S ribosomal RNA gene, complet... 234 0.0 19 (EF205325) Acanthamoeba sp. ACLCCOF-001 18S ribosomal RNA ge... 262 0.0 17 (AF260723) Acanthamoeba hatchetti strain 3ST 18S small subun... 262 0.0 17 (AF260721) Acanthamoeba castellanii strain 1BU 18S small sub... 262 0.0 17 (EF554328) Acanthamoeba castellanii strain ATCC 30010 18S ri... 262 0.0 17 (AF019056) Acanthamoeba polyphaga HC-2 18S ribosomal RNA gen... 262 0.0 17 (AF019050) Acanthamoeba pustulosa GE3a 18S ribosomal RNA gen... 262 0.0 17 (AF260724) Acanthamoeba castellanii strain 4CL 18S small sub... 262 0.0 17 (AF019052) Acanthamoeba polyphaga Panola Mountain 18S riboso... 262 0.0 17 (AF019051) Acanthamoeba polyphaga OX-1 18S ribosomal RNA gen... 262 0.0 17 (DQ103890) Acanthamoeba sp. MZOR 18S ribosomal RNA gene, par... 262 0.0 17 (AY694144) Acanthamoeba sp. L98/00 18S ribosomal RNA gene, c... 262 0.0 17 (AY694141) Acanthamoeba sp. L749/98 18S ribosomal RNA gene, ... 262 0.0 17 (AF260720) Acanthamoeba rhysodes 18S small subunit ribosomal... 262 0.0 17 (EF429130) Acanthamoeba sp. PAT05 18S ribosomal RNA gene, pa... 262 0.0 17 (AF019062) Acanthamoeba polyphaga Nagington 18S ribosomal RN... 262 0.0 17 (DQ013363) Acanthamoeba polyphaga 18S ribosomal RNA gene, pa... 262 0.0 17 (AF251939) Acanthamoeba hatchetti 11DS 18S ribosomal RNA gen... 262 0.0 17 (AF019058) Acanthamoeba sp. Vazaldua 18S ribosomal RNA gene,... 262 0.0 17 (AY702983) Acanthamoeba sp. CDC # V017 small subunit ribosom... 262 0.0 17 (AF019057) Acanthamoeba culbertsoni Diamond 18S ribosomal RN... 262 0.0 17 (AF019055) Acanthamoeba sp. Liu-E1 18S ribosomal RNA gene, p... 262 0.0 17 (DQ992180) Acanthamoeba sp. EFW10 18S ribosomal RNA gene, pa... 262 0.0 17 (DQ992179) Acanthamoeba sp. EFW1 18S ribosomal RNA gene, par... 262 0.0 17 (AF019063) Acanthamoeba palestinensis 2802 18S ribosomal RNA... 262 0.0 17 (AF019054) Acanthamoeba sp. Jin-E5 18S ribosomal RNA gene, p... 262 0.0 17 (AF019053) Acanthamoeba pearcei 18S ribosomal RNA gene, part... 262 0.0 17 (EF140631) Acanthamoeba sp. KA/E19 18S ribosomal RNA gene, c... 262 0.0 17 (AY694138) Acanthamoeba sp. L565/97 18S ribosomal RNA gene, ... 262 0.0 17 (AF260722) Acanthamoeba hatchetti strain 2HH 18S small subun... 262 0.0 17 (DQ992185) Acanthamoeba sp. EFW4 18S ribosomal RNA gene, par... 262 0.0 17 (DQ264391) Acanthamoeba sp. FA03 small subunit ribosomal RNA... 262 0.0 17 (AF019059) Acanthamoeba sp. Rodriguez 18S ribosomal RNA gene... 262 0.0 17 (EF024025) Eimeriidae environmental sample clone Amb_18S_150... 246 0.0 17 (EF025004) Uncultured eukaryote clone Elev_18S_4941 18S ribo... 238 0.0 17 (EF023463) Eimeriidae environmental sample clone Amb_18S_104... 238 0.0 17 (BJ361973) Dictyostelium discoideum cDNA clone:ddc19f15, 5' ... 815 0.0 2 (BJ359981) Dictyostelium discoideum cDNA clone:ddc3j18, 5' e... 815 0.0 2 (BJ323839) Dictyostelium discoideum cDNA clone:dda12c16, 5' ... 815 0.0 2 (EF023962) Eimeriidae environmental sample clone Amb_18S_142... 224 0.0 15 (EF023754) Eimeriidae environmental sample clone Amb_18S_119... 224 0.0 15 (EF023730) Eimeriidae environmental sample clone Amb_18S_116... 224 0.0 15 (EF023227) Eimeriidae environmental sample clone Amb_18S_527... 224 0.0 15 (L10825) Microciona prolifera 16S-like small subunit ribosom... 234 0.0 19 (EF023435) Uncultured Sarcosomataceae clone Amb_18S_1009 18S... 254 0.0 17 (AB425952) Acanthamoeba sp. Mbc_3E gene for 18S ribosomal RN... 262 0.0 17
>(AY171066) Dictyostelium discoideum extrachromosomal palindromic ribosomal RNA gene sequence, central segment. Length = 79318
Score = 2694 bits (1359), Expect(4) = 0.0 Identities = 1359/1359 (100%) Strand = Plus / Minus
Query: 1 aagaagagtgagcaagcagatgcaagtgaaagaagccagtaggcgactgacagcatgcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11591 aagaagagtgagcaagcagatgcaagtgaaagaagccagtaggcgactgacagcatgcaa 11532
Query: 61 gctgcagcagtgatacgctagtatcagtgtgctcatgtggtcctgctgcctagcagcggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11531 gctgcagcagtgatacgctagtatcagtgtgctcatgtggtcctgctgcctagcagcggt 11472
Query: 121 gccgcctcgtcttctggacattttttggcagacaaacgggtatcggaatcagttgagcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11471 gccgcctcgtcttctggacattttttggcagacaaacgggtatcggaatcagttgagcct 11412
Query: 181 aaccccatggattagcccgtggaaactctcaacagcgattcacccaatcatgtgcactgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11411 aaccccatggattagcccgtggaaactctcaacagcgattcacccaatcatgtgcactgc 11352
Query: 241 gactggcaacagcagtagtgtaccggagcgagtggcccatataacgaggttccttcactg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11351 gactggcaacagcagtagtgtaccggagcgagtggcccatataacgaggttccttcactg 11292
Query: 301 gatcggtagttgctgggtggcgagctccaaaccgccacagccatttgctttattgcgagc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11291 gatcggtagttgctgggtggcgagctccaaaccgccacagccatttgctttattgcgagc 11232
Query: 361 aatggcacgagtcaccggatgtagcaagcgcgtaaaaaacctgtgctacaaattaatcgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11231 aatggcacgagtcaccggatgtagcaagcgcgtaaaaaacctgtgctacaaattaatcgt 11172
Query: 421 ggagcgtgcgccgtccttttctaggtatgcatgcgctctcacaccccaggcggcgacagc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11171 ggagcgtgcgccgtccttttctaggtatgcatgcgctctcacaccccaggcggcgacagc 11112
Query: 481 aatgtcggctttctagacgtgtcaaagcgactaggccaatgcaataggtgacggaggagc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11111 aatgtcggctttctagacgtgtcaaagcgactaggccaatgcaataggtgacggaggagc 11052
Query: 541 aataaggagatctgttggcaaagtgctgatttactttgtggagcatggttaaaggccaga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11051 aataaggagatctgttggcaaagtgctgatttactttgtggagcatggttaaaggccaga 10992
Query: 601 tttaactatctgtcagctaacaatgtaacatttgatgaatctttttaattggtaataaaa 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10991 tttaactatctgtcagctaacaatgtaacatttgatgaatctttttaattggtaataaaa 10932
Query: 661 gtgacgggatctaatcctgtaattttgtgacctcttcaaagggaaacattaaccaaacaa 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10931 gtgacgggatctaatcctgtaattttgtgacctcttcaaagggaaacattaaccaaacaa 10872
Query: 721 tcaaaacaaaaaataagttttgtaattaatatgtaatagtgattaatatcatgatacgtg 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10871 tcaaaacaaaaaataagttttgtaattaatatgtaatagtgattaatatcatgatacgtg 10812
Query: 781 ttatctacatgcttaactggttgatcctgccagtagtcatatgcttgtctcaaagattaa 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10811 ttatctacatgcttaactggttgatcctgccagtagtcatatgcttgtctcaaagattaa 10752
Query: 841 gccatgcatgtctaagtataaattcttgtacgatgaaactgcagacggctcattacaaca 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10751 gccatgcatgtctaagtataaattcttgtacgatgaaactgcagacggctcattacaaca 10692
Query: 901 gtgataaactaatagactttcgggttttaccttttggataaccgcagtaaatcggggcta 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10691 gtgataaactaatagactttcgggttttaccttttggataaccgcagtaaatcggggcta 10632
Query: 961 atacatacaagcgatgggtgactggcaacggaagctcagcgattattagcattctaccaa 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10631 atacatacaagcgatgggtgactggcaacggaagctcagcgattattagcattctaccaa 10572
Query: 1021 tgccttcgggttttgggtgataccgaataatattgcagatcgaggatttatcttcgacaa 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10571 tgccttcgggttttgggtgataccgaataatattgcagatcgaggatttatcttcgacaa 10512
Query: 1081 gtctactgtgtcactgccctatcaactttcgatggtacggtattggcctaccatggttgt 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10511 gtctactgtgtcactgccctatcaactttcgatggtacggtattggcctaccatggttgt 10452
Query: 1141 aacgggtaacggggaattagggttcgattccggagagggagcctgagaaatggctaccac 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10451 aacgggtaacggggaattagggttcgattccggagagggagcctgagaaatggctaccac 10392
Query: 1201 ttctacggaaggcagcaggcgcgcaaattactcaatcccaatacggggaagtagtgacaa 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10391 ttctacggaaggcagcaggcgcgcaaattactcaatcccaatacggggaagtagtgacaa 10332
Query: 1261 taaatatcaatacctatcctttttggagggcaattgaaatgaacacaaattaaaactctt 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10331 taaatatcaatacctatcctttttggagggcaattgaaatgaacacaaattaaaactctt 10272
Query: 1321 aattaacacaattggagggcaagtctggtgccagcagcc 1359 ||||||||||||||||||||||||||||||||||||||| Sbjct: 10271 aattaacacaattggagggcaagtctggtgccagcagcc 10233
Score = 2694 bits (1359), Expect(4) = 0.0 Identities = 1359/1359 (100%) Strand = Plus / Plus
Query: 1 aagaagagtgagcaagcagatgcaagtgaaagaagccagtaggcgactgacagcatgcaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67728 aagaagagtgagcaagcagatgcaagtgaaagaagccagtaggcgactgacagcatgcaa 67787
Query: 61 gctgcagcagtgatacgctagtatcagtgtgctcatgtggtcctgctgcctagcagcggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67788 gctgcagcagtgatacgctagtatcagtgtgctcatgtggtcctgctgcctagcagcggt 67847
Query: 121 gccgcctcgtcttctggacattttttggcagacaaacgggtatcggaatcagttgagcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67848 gccgcctcgtcttctggacattttttggcagacaaacgggtatcggaatcagttgagcct 67907
Query: 181 aaccccatggattagcccgtggaaactctcaacagcgattcacccaatcatgtgcactgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67908 aaccccatggattagcccgtggaaactctcaacagcgattcacccaatcatgtgcactgc 67967
Query: 241 gactggcaacagcagtagtgtaccggagcgagtggcccatataacgaggttccttcactg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67968 gactggcaacagcagtagtgtaccggagcgagtggcccatataacgaggttccttcactg 68027
Query: 301 gatcggtagttgctgggtggcgagctccaaaccgccacagccatttgctttattgcgagc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68028 gatcggtagttgctgggtggcgagctccaaaccgccacagccatttgctttattgcgagc 68087
Query: 361 aatggcacgagtcaccggatgtagcaagcgcgtaaaaaacctgtgctacaaattaatcgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68088 aatggcacgagtcaccggatgtagcaagcgcgtaaaaaacctgtgctacaaattaatcgt 68147
Query: 421 ggagcgtgcgccgtccttttctaggtatgcatgcgctctcacaccccaggcggcgacagc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68148 ggagcgtgcgccgtccttttctaggtatgcatgcgctctcacaccccaggcggcgacagc 68207
Query: 481 aatgtcggctttctagacgtgtcaaagcgactaggccaatgcaataggtgacggaggagc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68208 aatgtcggctttctagacgtgtcaaagcgactaggccaatgcaataggtgacggaggagc 68267
Query: 541 aataaggagatctgttggcaaagtgctgatttactttgtggagcatggttaaaggccaga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68268 aataaggagatctgttggcaaagtgctgatttactttgtggagcatggttaaaggccaga 68327
Query: 601 tttaactatctgtcagctaacaatgtaacatttgatgaatctttttaattggtaataaaa 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68328 tttaactatctgtcagctaacaatgtaacatttgatgaatctttttaattggtaataaaa 68387
Query: 661 gtgacgggatctaatcctgtaattttgtgacctcttcaaagggaaacattaaccaaacaa 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68388 gtgacgggatctaatcctgtaattttgtgacctcttcaaagggaaacattaaccaaacaa 68447
Query: 721 tcaaaacaaaaaataagttttgtaattaatatgtaatagtgattaatatcatgatacgtg 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68448 tcaaaacaaaaaataagttttgtaattaatatgtaatagtgattaatatcatgatacgtg 68507
Query: 781 ttatctacatgcttaactggttgatcctgccagtagtcatatgcttgtctcaaagattaa 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68508 ttatctacatgcttaactggttgatcctgccagtagtcatatgcttgtctcaaagattaa 68567
Query: 841 gccatgcatgtctaagtataaattcttgtacgatgaaactgcagacggctcattacaaca 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68568 gccatgcatgtctaagtataaattcttgtacgatgaaactgcagacggctcattacaaca 68627
Query: 901 gtgataaactaatagactttcgggttttaccttttggataaccgcagtaaatcggggcta 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68628 gtgataaactaatagactttcgggttttaccttttggataaccgcagtaaatcggggcta 68687
Query: 961 atacatacaagcgatgggtgactggcaacggaagctcagcgattattagcattctaccaa 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68688 atacatacaagcgatgggtgactggcaacggaagctcagcgattattagcattctaccaa 68747
Query: 1021 tgccttcgggttttgggtgataccgaataatattgcagatcgaggatttatcttcgacaa 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68748 tgccttcgggttttgggtgataccgaataatattgcagatcgaggatttatcttcgacaa 68807
Query: 1081 gtctactgtgtcactgccctatcaactttcgatggtacggtattggcctaccatggttgt 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68808 gtctactgtgtcactgccctatcaactttcgatggtacggtattggcctaccatggttgt 68867
Query: 1141 aacgggtaacggggaattagggttcgattccggagagggagcctgagaaatggctaccac 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68868 aacgggtaacggggaattagggttcgattccggagagggagcctgagaaatggctaccac 68927
Query: 1201 ttctacggaaggcagcaggcgcgcaaattactcaatcccaatacggggaagtagtgacaa 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68928 ttctacggaaggcagcaggcgcgcaaattactcaatcccaatacggggaagtagtgacaa 68987
Query: 1261 taaatatcaatacctatcctttttggagggcaattgaaatgaacacaaattaaaactctt 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68988 taaatatcaatacctatcctttttggagggcaattgaaatgaacacaaattaaaactctt 69047
Query: 1321 aattaacacaattggagggcaagtctggtgccagcagcc 1359 ||||||||||||||||||||||||||||||||||||||| Sbjct: 69048 aattaacacaattggagggcaagtctggtgccagcagcc 69086
Score = 1509 bits (761), Expect(4) = 0.0 Identities = 761/761 (100%) Strand = Plus / Minus
Query: 1578 ctgatcttttgcagcatggtatgatgaaacatgacattttacgctattggtttgcgttta 1637 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10016 ctgatcttttgcagcatggtatgatgaaacatgacattttacgctattggtttgcgttta 9957
Query: 1638 aagtgtaatgattaatagggatggatgggggtgttcatattggtgggcgagaggtgaaat 1697 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9956 aagtgtaatgattaatagggatggatgggggtgttcatattggtgggcgagaggtgaaat 9897
Query: 1698 tcgttgaccctatcaagatgaacttctgcgaaagcattcaccaaatacttccccattaat 1757 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9896 tcgttgaccctatcaagatgaacttctgcgaaagcattcaccaaatacttccccattaat 9837
Query: 1758 caagaacgaaagtttggggatcgaagacgatcagataccgtcgtagtccaaactataaac 1817 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9836 caagaacgaaagtttggggatcgaagacgatcagataccgtcgtagtccaaactataaac 9777
Query: 1818 tatgtcgaccagggatcggttaaaattttttcaaaatttaatcggcaccttgtgagaaat 1877 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9776 tatgtcgaccagggatcggttaaaattttttcaaaatttaatcggcaccttgtgagaaat 9717
Query: 1878 catgagtgtttagattccggggggagtatggtcgcaagtctgaaacttaaaggaattgac 1937 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9716 catgagtgtttagattccggggggagtatggtcgcaagtctgaaacttaaaggaattgac 9657
Query: 1938 ggaagggcacacaatggagtggagcctgcggcttaatttgactcaactcgggaaaactta 1997 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9656 ggaagggcacacaatggagtggagcctgcggcttaatttgactcaactcgggaaaactta 9597
Query: 1998 ccaagctaagatatagtaaggattgacagactaaaagatctttcatgattctataagtgg 2057 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9596 ccaagctaagatatagtaaggattgacagactaaaagatctttcatgattctataagtgg 9537
Query: 2058 tggtgcatggtcgttcttagttggtggagcgatttgtctggtcaattccgataacggacg 2117 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9536 tggtgcatggtcgttcttagttggtggagcgatttgtctggtcaattccgataacggacg 9477
Query: 2118 agacctcgacctgctaactagtagtatttattagtcgatatagacgatagcttttctggg 2177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9476 agacctcgacctgctaactagtagtatttattagtcgatatagacgatagcttttctggg 9417
Query: 2178 gtttggaatgatttcggtcatctcctgcttcaaggagtgtgtagtctgactcgataggta 2237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9416 gtttggaatgatttcggtcatctcctgcttcaaggagtgtgtagtctgactcgataggta 9357
Query: 2238 cgaattaaaacttcttagagggactacctgcctcaagcaggcggaagtccgaggcaataa 2297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9356 cgaattaaaacttcttagagggactacctgcctcaagcaggcggaagtccgaggcaataa 9297
Query: 2298 caggtctgtgatgcccttagataccttgggccgcacgcgcg 2338 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9296 caggtctgtgatgcccttagataccttgggccgcacgcgcg 9256
Score = 1509 bits (761), Expect(4) = 0.0 Identities = 761/761 (100%) Strand = Plus / Plus
Query: 1578 ctgatcttttgcagcatggtatgatgaaacatgacattttacgctattggtttgcgttta 1637 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69303 ctgatcttttgcagcatggtatgatgaaacatgacattttacgctattggtttgcgttta 69362
Query: 1638 aagtgtaatgattaatagggatggatgggggtgttcatattggtgggcgagaggtgaaat 1697 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69363 aagtgtaatgattaatagggatggatgggggtgttcatattggtgggcgagaggtgaaat 69422
Query: 1698 tcgttgaccctatcaagatgaacttctgcgaaagcattcaccaaatacttccccattaat 1757 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69423 tcgttgaccctatcaagatgaacttctgcgaaagcattcaccaaatacttccccattaat 69482
Query: 1758 caagaacgaaagtttggggatcgaagacgatcagataccgtcgtagtccaaactataaac 1817 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69483 caagaacgaaagtttggggatcgaagacgatcagataccgtcgtagtccaaactataaac 69542
Query: 1818 tatgtcgaccagggatcggttaaaattttttcaaaatttaatcggcaccttgtgagaaat 1877 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69543 tatgtcgaccagggatcggttaaaattttttcaaaatttaatcggcaccttgtgagaaat 69602
Query: 1878 catgagtgtttagattccggggggagtatggtcgcaagtctgaaacttaaaggaattgac 1937 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69603 catgagtgtttagattccggggggagtatggtcgcaagtctgaaacttaaaggaattgac 69662
Query: 1938 ggaagggcacacaatggagtggagcctgcggcttaatttgactcaactcgggaaaactta 1997 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69663 ggaagggcacacaatggagtggagcctgcggcttaatttgactcaactcgggaaaactta 69722
Query: 1998 ccaagctaagatatagtaaggattgacagactaaaagatctttcatgattctataagtgg 2057 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69723 ccaagctaagatatagtaaggattgacagactaaaagatctttcatgattctataagtgg 69782
Query: 2058 tggtgcatggtcgttcttagttggtggagcgatttgtctggtcaattccgataacggacg 2117 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69783 tggtgcatggtcgttcttagttggtggagcgatttgtctggtcaattccgataacggacg 69842
Query: 2118 agacctcgacctgctaactagtagtatttattagtcgatatagacgatagcttttctggg 2177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69843 agacctcgacctgctaactagtagtatttattagtcgatatagacgatagcttttctggg 69902
Query: 2178 gtttggaatgatttcggtcatctcctgcttcaaggagtgtgtagtctgactcgataggta 2237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69903 gtttggaatgatttcggtcatctcctgcttcaaggagtgtgtagtctgactcgataggta 69962
Query: 2238 cgaattaaaacttcttagagggactacctgcctcaagcaggcggaagtccgaggcaataa 2297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69963 cgaattaaaacttcttagagggactacctgcctcaagcaggcggaagtccgaggcaataa 70022
Query: 2298 caggtctgtgatgcccttagataccttgggccgcacgcgcg 2338 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 70023 caggtctgtgatgcccttagataccttgggccgcacgcgcg 70063
Score = 652 bits (329), Expect(4) = 0.0 Identities = 329/329 (100%) Strand = Plus / Minus
Query: 2339 gctacaatgtaggaaacaaaaaggctcctggtccggaaggattgggtaatcatttgaatt 2398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9256 gctacaatgtaggaaacaaaaaggctcctggtccggaaggattgggtaatcatttgaatt 9197
Query: 2399 tcctacgtaactgggcttgatctttgtaattattgatcataaacgaggaattccttgtaa 2458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9196 tcctacgtaactgggcttgatctttgtaattattgatcataaacgaggaattccttgtaa 9137
Query: 2459 gcgtaagtcattaccttatgctgaatatgtccctgccctttgtacacaccgcccgtcgct 2518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9136 gcgtaagtcattaccttatgctgaatatgtccctgccctttgtacacaccgcccgtcgct 9077
Query: 2519 cctaccgatcgaatgatacggtaaagttaacggatcgttttatctgtggcaacactgata 2578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9076 cctaccgatcgaatgatacggtaaagttaacggatcgttttatctgtggcaacactgata 9017
Query: 2579 taaattaaaagttatttaaatctcattgtttagaggaaggagaagtcgtaacaaggtatc 2638 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9016 taaattaaaagttatttaaatctcattgtttagaggaaggagaagtcgtaacaaggtatc 8957
Query: 2639 cgtaggtgaacctgcggatggatcatttt 2667 ||||||||||||||||||||||||||||| Sbjct: 8956 cgtaggtgaacctgcggatggatcatttt 8928
Score = 652 bits (329), Expect(4) = 0.0 Identities = 329/329 (100%) Strand = Plus / Plus
Query: 2339 gctacaatgtaggaaacaaaaaggctcctggtccggaaggattgggtaatcatttgaatt 2398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70063 gctacaatgtaggaaacaaaaaggctcctggtccggaaggattgggtaatcatttgaatt 70122
Query: 2399 tcctacgtaactgggcttgatctttgtaattattgatcataaacgaggaattccttgtaa 2458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70123 tcctacgtaactgggcttgatctttgtaattattgatcataaacgaggaattccttgtaa 70182
Query: 2459 gcgtaagtcattaccttatgctgaatatgtccctgccctttgtacacaccgcccgtcgct 2518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70183 gcgtaagtcattaccttatgctgaatatgtccctgccctttgtacacaccgcccgtcgct 70242
Query: 2519 cctaccgatcgaatgatacggtaaagttaacggatcgttttatctgtggcaacactgata 2578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70243 cctaccgatcgaatgatacggtaaagttaacggatcgttttatctgtggcaacactgata 70302
Query: 2579 taaattaaaagttatttaaatctcattgtttagaggaaggagaagtcgtaacaaggtatc 2638 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70303 taaattaaaagttatttaaatctcattgtttagaggaaggagaagtcgtaacaaggtatc 70362
Query: 2639 cgtaggtgaacctgcggatggatcatttt 2667 ||||||||||||||||||||||||||||| Sbjct: 70363 cgtaggtgaacctgcggatggatcatttt 70391
Score = 434 bits (219), Expect(4) = 0.0 Identities = 219/219 (100%) Strand = Plus / Minus
Query: 1359 ccgcggtaattccagctccaatagcatatactaaagttgttgcagttaaaaagctcgtag 1418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10234 ccgcggtaattccagctccaatagcatatactaaagttgttgcagttaaaaagctcgtag 10175
Query: 1419 ttgaagtttaaggtttaccgggtttatgtcatttaccacttcgtggttaaatcgacaccg 1478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10174 ttgaagtttaaggtttaccgggtttatgtcatttaccacttcgtggttaaatcgacaccg 10115
Query: 1479 gtatctctttcttaatagttcagcttgtattatctttgatagtgcttgtttggacatttc 1538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10114 gtatctctttcttaatagttcagcttgtattatctttgatagtgcttgtttggacatttc 10055
Query: 1539 actgtgagaaaattgtggtgtttaaagcaggcgtctcgc 1577 ||||||||||||||||||||||||||||||||||||||| Sbjct: 10054 actgtgagaaaattgtggtgtttaaagcaggcgtctcgc 10016
Score = 434 bits (219), Expect(4) = 0.0 Identities = 219/219 (100%) Strand = Plus / Plus
Query: 1359 ccgcggtaattccagctccaatagcatatactaaagttgttgcagttaaaaagctcgtag 1418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69085 ccgcggtaattccagctccaatagcatatactaaagttgttgcagttaaaaagctcgtag 69144
Query: 1419 ttgaagtttaaggtttaccgggtttatgtcatttaccacttcgtggttaaatcgacaccg 1478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69145 ttgaagtttaaggtttaccgggtttatgtcatttaccacttcgtggttaaatcgacaccg 69204
Query: 1479 gtatctctttcttaatagttcagcttgtattatctttgatagtgcttgtttggacatttc 1538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69205 gtatctctttcttaatagttcagcttgtattatctttgatagtgcttgtttggacatttc 69264
Query: 1539 actgtgagaaaattgtggtgtttaaagcaggcgtctcgc 1577 ||||||||||||||||||||||||||||||||||||||| Sbjct: 69265 actgtgagaaaattgtggtgtttaaagcaggcgtctcgc 69303
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 102105510 Number of Hits to DB: 3,462,413,059 Number of extensions: 198795282 Number of successful extensions: 18457694 Number of sequences better than 10.0: 637436 Length of query: 3358 Length of database: 101,790,757,118 Length adjustment: 25 Effective length of query: 3333 Effective length of database: 99,238,119,368 Effective search space: 330760651853544 Effective search space used: 330760651853544 X1: 11 (21.8 bits) S2: 23 (46.1 bits)
|
protein update |
2009. 7.28 |
Homology vs Protein |
|
PSORT |
|
VS (DIR, S) |
2 |
VH (FL, L) |
21 |
VF (FL, S) |
14 |
AH (FL, L) |
9 |
AF (FL, S) |
0 |
SL (DIR, L) |
1 |
SS (DIR, S) |
3 |
SH (FL, L) |
4 |
SF (FL, S) |
5 |
CH (FL, L) |
40 |
CF (FL, S) |
4 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
130 |
FC-IC (SUB) |
126 |