Contig-U16521-1
Contig ID Contig-U16521-1
Contig update 2004. 6.11
Contig sequence
>Contig-U16521-1 (Contig-U16521-1Q) /CSM_Contig/Contig-U16521-1Q.Seq.d
CTTAATAGGGTGTTTCAAGAGTTACATTTATTAGACCCGAAACCAAGCGA
TCTAATTATGAACACGCATTTTATTATTTTTATTTTAATTTGGCGGAACC
CGTAACTGTTGCAAAAGTTTGGGATGATTTGTGATTAGGGGTGAAAGGCT
AATCAAGCTTGGTGATAGCTGGTTTTTTACGAAATCTATCTAGGTAGAAC
GGTGGTATATTGTTTATTATTATTTGAAAAAGTCTTAATAAACATTATTA
AAGCAATTTAATAAAAGAAAATTTATAGAGGTAGAGCACTGAATGGTTCA
ACCTAAGGTTATTATTTAAACTTCGAATACTATAAATAAATTGACCACTA
GGCAGACTATGAGCGCTAAGGTCCATAGGTCTAAAGGGAAACAGCCCAGA
TTGTAAGTTAATGTTCTTAAATAATAGTGTAGTGTCAAAGGCATGGAGAA
AGTGATGTTAATTGGAAAGTAGGATTGGAAGCGACCATCTTTTAAAGAAA
GCGTAAAAGCTCACCAATTTAAGGCGTTCTCTAGCCAACAATGTACAGGA
ACTCAACATTATACAGAAACTACAAAATTATAACATTGGTAGTAAAATGT
TCCGTATAATTGTGAAGTTAACTCAAGAAGAGATAATGGAGTTATCGGAA
TTAAGAATGCTGATATGAGTAATGTTAATAAGGTTAAGACCTTATCACTG
AAAATTAGAAGTTTCCTAATAAAAAGGTAAGCTGATTAGGGTTACGCGAT
CGCTAAGATTAATATGACAATAAACTATCGATGCGCATATAGATTAATAA
TTCTAACGTTTTTATTGTAGTTTTAATTGACATGTGTATTTTAAATAATT
ATATTATACTTACATTATAGATTATTTGAAATATAAGTTTTAAAAATAGA
TTAAAACAAAATATCTGTAAAAAGATATTTTAAATAAAAAATCGTACTTA
AACCGACACTGGTTAATTGATAGAATATATTAAAGTGTAGAATGAATGAT
TCTGAAGGAACTCGGCAAAATAACTCCGTAACTGCGGGAGAAGGAGAGCC
TTTGTTGTAAAAAATGAAGGTCACAGTAAAGAAGGGGTGGCGACTGTTTA
ATAAAAACACAGGATTCTGCAAAATGGCAACATGATGTATAGGGTCTGCG
ACCTGCCCGGTGCTCCAAGAGGAAGAGGAGAACTGCAAGGTTTGAATTGA
AGTCTGAGTAAACGGCGGCTGTAACTATGACGGTCCTAAGGTAGCGAAAT
TCCTTGTCGAGTAATTTTCGACGCGCATGAATGGTGTAACGACCTCCCCA
CTGTCTCCAGAATCACTTCGATGAAATTGAACTTTCCGTGAAGATGCGGA
ATATTAGCAGCTAGACGGAAAGACCCTATGCACCTTAACTTCACGCATAT
ATTGTGCAACATTTTTAATTACGTAGGATACTTATGATGCTTATGATCTT
TTGGTTTTGGCCAATTTAAAGGAGGCGCTGGTGAAATAGTAAGTATATTA
GAAAAATAGTACTCAAACATGATAATGTATGCCGGGTAGTTTGACTGGGG
CGGTAACCTTCTAAAGAGTAACGAAGGTGTATAAAGGTAAACTCAAAATA
AACTGGTTAGTTATTTGGTGAGTGTAATGGCATAAGTTTGCTTGACTGAA
AGACCTACAAGTCGATCAGAGACGCAAGTCGATCATAGTGATCCAATAGT
TCTGTGTGGAAAGGCTATTGCTAACGGATAAAAGGTACGCTAGGGATAAC
AGGCTAGTCACATATTAGAGTTCATATCTGTTATGTGGTTCGGCACCTCG
ATGTCGGCTTAACACATCCCGGAGTTGAAAAAGTTTCCAAGGGTTGGGGT
GTTCACCCATTAAAGTGTTACATGAGCTGGGTTTAAAACGTCGTGAGACA
GTTTGGTCCCTATCTACTGTTAAAAACGAAAAAATTAAAATCCTTCCTTT
AGTACGAGAGGACTGAGGTGGGTCGATCACTGGTGTATTAATTATTATAA
CAATAGTACCGTTAAGTAGCTACATCGAAATATTAATAATATATAGTATT
ATTAAGAGAGAACTGCTGAAAAAATATTAAGTAGGAAACTTATTTTAGAT
TTTTTTATAGTCAGGTAAAAGATTATTACTTTGATAGGCTACATATAGAA
ATGAATAGTAATATAATATAAAAATTTGAAAAAATTTTTCCATTAATTCT
ATAATTAATGTGATCTTATTTATTAAGATTAGTAAAGTAGTACTAAATAT
GGATGACGTATTTTATATTTCAAATTATTTTTAACAAATTATATTATTAT
ACTTTAATCAAATGACATCAGGTGGAATCGTACAACCAGGCCAAAATCTC
TCACAACGTCCAATAAACGGCCCAATATGGGCTGGGGACCAGCAGCAGGA
AGTGCCGCAAATCCACGTGGCGATCTCCGTGGTTACACTTACAATATTAG
ATAGTTTCGCTGTCTATTTCTGAATATTCAGAAATCTTTGTTTAATGCCA
AAAATAGTAGATATCTATTATATTTTCTCATTTTATAAATCTGATAAGAT
CTGTCTTAAATAAAAAAAATCAAAT

Gap no gap
Contig length 2575
Chromosome number (1..6, M) M
Chromosome length 55569
Start point 20265
End point 22581
Strand (PLUS/MINUS) PLUS
Number of clones 39
Number of EST 50
Link to clone list U16521
List of clone(s)

est1=CHF548F,1,484
est2=VHL317F,4,617
est3=VHO432F,80,674
est4=AFF514F,190,815
est5=VSD302E,457,1087
est6=CHD527F,517,1073
est7=VSJ585E,553,1312
est8=VSI661F,554,1051
est9=VSF608E,561,1299
est10=FC-AB17F,567,1258
est11=VFG822Z,567,775
est12=SLE610E,568,1306
est13=CFD643F,572,1167
est14=VSI661Z,573,946
est15=FC-AJ17E,582,1307
est16=SLA276Z,682,1307
est17=FC-AY04Z,725,1307
est18=CFA667F,726,1299
est19=VSC395Z,754,1319
est20=FC-AR19Z,759,1323
est21=VFE275F,774,1222
est22=FC-AP05Z,775,1306
est23=VSA462Z,788,1336
est24=VSC551Z,807,1313
est25=AFF514Z,809,1310
est26=VSD653E,857,1298
est27=VHB176F,935,1153
est28=FC-IC1431Z,936,1150
est29=FC-IC0276E,946,1150
est30=FC-IC1431F,946,1150
est31=VSD861F,993,1323
est32=VSD861Z,993,1300
est33=VHA636F,998,1562
est34=CHI887F,1010,1570
est35=SFB625F,1020,1465
est36=SLC415E,1103,1312
est37=SHC457Z,1218,1860
est38=AFJ856F,1450,2021
est39=SHG307Z,1483,2250
est40=CFA667Z,1562,2238
est41=CHF548Z,1565,2289
est42=VHL317Z,1600,2248
est43=CHI887Z,1610,2319
est44=VFE275Z,1649,2230
est45=CHD527Z,1656,2243
est46=SFB625Z,1730,2274
est47=CFD643Z,1840,2209
est48=VHJ104F,1848,2408
est49=SHH465Z,1865,2377
est50=VHO432Z,1893,2575
Translated Amino Acid sequence
ligcfksyiy*trnqai*l*trillflf*fggtrncckslg*fvirgerliklgdswfft
ksi*verwyivyyylkks**tllkqfnkrkfieveh*mvqpkvii*tsntinklttrqtm
sakvhrskgkqprl*vnvlk**csvkgmekvmligk*dwkrpsfkesvkahqfkafssqq
ctgtqhytettkl*hw**nvpyncevnsrrdngvigiknadmsnvnkvktlslkirsfli
kr*ad*gyaiakinmtinyrcayrliiltfll*f*ltcvf*iiilylhyrlfei*vlkid
*nkisvkryfk*kivlkptlvn**nilkcrmndsegtrqnnsvtagegepll*kmkvtvk
kgwrlfnkntgfckmat*cigsatcpvlqeeeenckv*iev*vnggcnydgpkvakflve
*fstrmngvttsplspeslr*n*tfredaey*qldgktlctltsriycatflit*dtyda
ydllvlanlkealvk**vy*knstqt**cmpgsltgavtf*rvtkvykgklkinwlviw*
v*whkfa*lkdlqvdqrrksiiviq*fcverllltdkryardnrlvty*ssyllcgsapr
crlntsrs*ksfqglgcspikvlhelglkrretvwslstvknekikilplvred*ggsit
gvliiitivplssyieiliiysiikrellkky*vgnlf*ifl*sgkrlll**atyrne**
yniki*knfsinsiinvilfikiskvvlnmddvfyisnyf*QIILLYFNQMTSGGIVQPG
QNLSQRPINGPIWAGDQQQEVPQIHVAISVVTLTILDSFAVYF*ifrnlclmpkivdiyy
ifsfyksdkiclk*kksn


Translated Amino Acid sequence (All Frames)
Frame A:
lnrvfqelhlldpkpsdlimnthfiifiliwrnp*llqkfgmicd*g*kanqaw**lvfy
eiylgrtvvyclllfekvliniikai**kkiyrgralngst*gyylnfeyyk*idh*ady
er*gp*v*retaqivs*cs*iiv*cqrhgesdvnwkvgleatif*rkrksspi*gvl*pt
myrnstlyrnykiitlvvkcsv*l*s*lkkr*wsyrn*ec*ye*c**g*dliten*kfpn
kkvs*lglrdr*d*ydnklsmri*innsnvfivvlidmcilnnyiiltl*ii*nisfknr
lkqnickkif*iknrt*tdtg*lieyikv*ne*f*rnsak*lrncgrrrafvvkneghsk
egvatv**khrilqngnmmyrvcdlpgaprgrgelqgln*slskrrl*l*rs*gseipcr
vifdahewcndlptvsritsmklnfp*rcgilaarrkdpmhlnfthilcnifnyvgyl*c
l*sfgfgqfkggageivsilek*ysnmimyag*fdwggnllksnegv*r*tqnklvsylv
svma*vclterptsrsetqvdhsdpivlcgkaiang*kvr*g*qashilefisvmwfgts
msa*hipelkkfprvgvfth*svt*agfkts*dslvpiyc*krkn*npsfstrglrwvdh
wcinyynnstvk*lhrninni*yy*ertaekilsrklildffivr*kiitligyi*k*iv
i*yknlkkffh*fyn*cdliy*d**sstkyg*rilyfklfltnyiiil*sndirwnrttr
pkslttsnkrpnmgwgpaagsaanprgdlrgytynir*frclflniqkslfnaknsryll
yflil*i**dls*ikkik


Frame B:
ligcfksyiy*trnqai*l*trillflf*fggtrncckslg*fvirgerliklgdswfft
ksi*verwyivyyylkks**tllkqfnkrkfieveh*mvqpkvii*tsntinklttrqtm
sakvhrskgkqprl*vnvlk**csvkgmekvmligk*dwkrpsfkesvkahqfkafssqq
ctgtqhytettkl*hw**nvpyncevnsrrdngvigiknadmsnvnkvktlslkirsfli
kr*ad*gyaiakinmtinyrcayrliiltfll*f*ltcvf*iiilylhyrlfei*vlkid
*nkisvkryfk*kivlkptlvn**nilkcrmndsegtrqnnsvtagegepll*kmkvtvk
kgwrlfnkntgfckmat*cigsatcpvlqeeeenckv*iev*vnggcnydgpkvakflve
*fstrmngvttsplspeslr*n*tfredaey*qldgktlctltsriycatflit*dtyda
ydllvlanlkealvk**vy*knstqt**cmpgsltgavtf*rvtkvykgklkinwlviw*
v*whkfa*lkdlqvdqrrksiiviq*fcverllltdkryardnrlvty*ssyllcgsapr
crlntsrs*ksfqglgcspikvlhelglkrretvwslstvknekikilplvred*ggsit
gvliiitivplssyieiliiysiikrellkky*vgnlf*ifl*sgkrlll**atyrne**
yniki*knfsinsiinvilfikiskvvlnmddvfyisnyf*QIILLYFNQMTSGGIVQPG
QNLSQRPINGPIWAGDQQQEVPQIHVAISVVTLTILDSFAVYF*ifrnlclmpkivdiyy
ifsfyksdkiclk*kksn


Frame C:
**gvsrvtfirpetkrsnyehafyyfyfnlaepvtvakvwddl*lgvkg*sslviagflr
nlsr*nggilfiii*kslnkhy*snlikenl*r*stewfnlrllfklril*in*plgrl*
alrsiglkgnspdcklmflnnsvvskawrk*c*lesrigsdhllkka*kltnlrrslann
vqelniiqklqnynigskmfriivkltqeeimelselrmli*vmlirlrpyh*klevs**
kgklirvtrslrli*q*tidahid**f*rfycsfn*hvyfk*lyytyiidylkykf*k*i
ktkyl*kdilnkksylnrhwlidriy*sve*milkelgkitp*lrekeslcckk*rsq*r
rggdcliktqdsakwqhdv*glrparcskrkrrtarfelkse*taavtmtvlr*rnslss
nfrra*mv*rpphclqnhfdeielsvkmrniss*terpyap*lhayivqhf*lrrilmml
mifwfwpi*rrrw*nskyirkivlkhdnvcrvv*lgr*pske*rrcikvnsk*tg*lfge
cngislld*ktyksirdasrs**snssvwkgyc*rikgtlgitg*shirvhicyvvrhld
vglthpgvekvskgwgvhplkcymswv*nvvrqfgpylllktkklksfl*yertevgrsl
vy*ll*q*yr*vatsky**yivllrenc*knik*etyfrffysqvkdyyfdrlhiemnsn
ii*kfekifplil*lm*syllrlvk*y*iwmtyfifqiifnklyyytlik*hqvesynqa
kishnvq*taqyglgtssrkcrkstwrspwlhlqy*ivslsiseyseifv*cqk**isii
fshfinlirsvlnkknq


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U16521-1 (Contig-U16521-1Q)
/CSM_Contig/Contig-U16521-1Q.Seq.d
(2575 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U16521-1 (Contig-U16521-1Q) /CSM_Contig/Conti... 1943 0.0
Contig-U12612-1 (Contig-U12612-1Q) /CSM_Contig/Conti... 341 3e-93
Contig-U16583-1 (Contig-U16583-1Q) /CSM_Contig/Conti... 42 0.004
Contig-U16581-1 (Contig-U16581-1Q) /CSM_Contig/Conti... 42 0.004
Contig-U16580-1 (Contig-U16580-1Q) /CSM_Contig/Conti... 42 0.004
Contig-U16579-1 (Contig-U16579-1Q) /CSM_Contig/Conti... 42 0.004
Contig-U15548-1 (Contig-U15548-1Q) /CSM_Contig/Conti... 42 0.004
Contig-U15392-1 (Contig-U15392-1Q) /CSM_Contig/Conti... 38 0.066
Contig-U14153-1 (Contig-U14153-1Q) /CSM_Contig/Conti... 38 0.066
Contig-U16154-1 (Contig-U16154-1Q) /CSM_Contig/Conti... 36 0.26

>Contig-U16521-1 (Contig-U16521-1Q) /CSM_Contig/Contig-U16521-1Q.Seq.d
Length = 2575

Score = 1943 bits (980), Expect = 0.0
Identities = 980/980 (100%)
Strand = Plus / Plus


Query: 942 tcgtacttaaaccgacactggttaattgatagaatatattaaagtgtagaatgaatgatt 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 tcgtacttaaaccgacactggttaattgatagaatatattaaagtgtagaatgaatgatt 1001


Query: 1002 ctgaaggaactcggcaaaataactccgtaactgcgggagaaggagagcctttgttgtaaa 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 ctgaaggaactcggcaaaataactccgtaactgcgggagaaggagagcctttgttgtaaa 1061


Query: 1062 aaatgaaggtcacagtaaagaaggggtggcgactgtttaataaaaacacaggattctgca 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 aaatgaaggtcacagtaaagaaggggtggcgactgtttaataaaaacacaggattctgca 1121


Query: 1122 aaatggcaacatgatgtatagggtctgcgacctgcccggtgctccaagaggaagaggaga 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 aaatggcaacatgatgtatagggtctgcgacctgcccggtgctccaagaggaagaggaga 1181


Query: 1182 actgcaaggtttgaattgaagtctgagtaaacggcggctgtaactatgacggtcctaagg 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 actgcaaggtttgaattgaagtctgagtaaacggcggctgtaactatgacggtcctaagg 1241


Query: 1242 tagcgaaattccttgtcgagtaattttcgacgcgcatgaatggtgtaacgacctccccac 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 tagcgaaattccttgtcgagtaattttcgacgcgcatgaatggtgtaacgacctccccac 1301


Query: 1302 tgtctccagaatcacttcgatgaaattgaactttccgtgaagatgcggaatattagcagc 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 tgtctccagaatcacttcgatgaaattgaactttccgtgaagatgcggaatattagcagc 1361


Query: 1362 tagacggaaagaccctatgcaccttaacttcacgcatatattgtgcaacatttttaatta 1421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 tagacggaaagaccctatgcaccttaacttcacgcatatattgtgcaacatttttaatta 1421


Query: 1422 cgtaggatacttatgatgcttatgatcttttggttttggccaatttaaaggaggcgctgg 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 cgtaggatacttatgatgcttatgatcttttggttttggccaatttaaaggaggcgctgg 1481


Query: 1482 tgaaatagtaagtatattagaaaaatagtactcaaacatgataatgtatgccgggtagtt 1541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1482 tgaaatagtaagtatattagaaaaatagtactcaaacatgataatgtatgccgggtagtt 1541


Query: 1542 tgactggggcggtaaccttctaaagagtaacgaaggtgtataaaggtaaactcaaaataa 1601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1542 tgactggggcggtaaccttctaaagagtaacgaaggtgtataaaggtaaactcaaaataa 1601


Query: 1602 actggttagttatttggtgagtgtaatggcataagtttgcttgactgaaagacctacaag 1661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1602 actggttagttatttggtgagtgtaatggcataagtttgcttgactgaaagacctacaag 1661


Query: 1662 tcgatcagagacgcaagtcgatcatagtgatccaatagttctgtgtggaaaggctattgc 1721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1662 tcgatcagagacgcaagtcgatcatagtgatccaatagttctgtgtggaaaggctattgc 1721


Query: 1722 taacggataaaaggtacgctagggataacaggctagtcacatattagagttcatatctgt 1781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1722 taacggataaaaggtacgctagggataacaggctagtcacatattagagttcatatctgt 1781


Query: 1782 tatgtggttcggcacctcgatgtcggcttaacacatcccggagttgaaaaagtttccaag 1841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1782 tatgtggttcggcacctcgatgtcggcttaacacatcccggagttgaaaaagtttccaag 1841


Query: 1842 ggttggggtgttcacccattaaagtgttacatgagctgggtttaaaacgtcgtgagacag 1901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1842 ggttggggtgttcacccattaaagtgttacatgagctgggtttaaaacgtcgtgagacag 1901


Query: 1902 tttggtccctatctactgtt 1921
||||||||||||||||||||
Sbjct: 1902 tttggtccctatctactgtt 1921


Score = 1584 bits (799), Expect = 0.0
Identities = 799/799 (100%)
Strand = Plus / Plus


Query: 92 ggcggaacccgtaactgttgcaaaagtttgggatgatttgtgattaggggtgaaaggcta 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 ggcggaacccgtaactgttgcaaaagtttgggatgatttgtgattaggggtgaaaggcta 151


Query: 152 atcaagcttggtgatagctggttttttacgaaatctatctaggtagaacggtggtatatt 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 atcaagcttggtgatagctggttttttacgaaatctatctaggtagaacggtggtatatt 211


Query: 212 gtttattattatttgaaaaagtcttaataaacattattaaagcaatttaataaaagaaaa 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gtttattattatttgaaaaagtcttaataaacattattaaagcaatttaataaaagaaaa 271


Query: 272 tttatagaggtagagcactgaatggttcaacctaaggttattatttaaacttcgaatact 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tttatagaggtagagcactgaatggttcaacctaaggttattatttaaacttcgaatact 331


Query: 332 ataaataaattgaccactaggcagactatgagcgctaaggtccataggtctaaagggaaa 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ataaataaattgaccactaggcagactatgagcgctaaggtccataggtctaaagggaaa 391


Query: 392 cagcccagattgtaagttaatgttcttaaataatagtgtagtgtcaaaggcatggagaaa 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cagcccagattgtaagttaatgttcttaaataatagtgtagtgtcaaaggcatggagaaa 451


Query: 452 gtgatgttaattggaaagtaggattggaagcgaccatcttttaaagaaagcgtaaaagct 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gtgatgttaattggaaagtaggattggaagcgaccatcttttaaagaaagcgtaaaagct 511


Query: 512 caccaatttaaggcgttctctagccaacaatgtacaggaactcaacattatacagaaact 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 caccaatttaaggcgttctctagccaacaatgtacaggaactcaacattatacagaaact 571


Query: 572 acaaaattataacattggtagtaaaatgttccgtataattgtgaagttaactcaagaaga 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 acaaaattataacattggtagtaaaatgttccgtataattgtgaagttaactcaagaaga 631


Query: 632 gataatggagttatcggaattaagaatgctgatatgagtaatgttaataaggttaagacc 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gataatggagttatcggaattaagaatgctgatatgagtaatgttaataaggttaagacc 691


Query: 692 ttatcactgaaaattagaagtttcctaataaaaaggtaagctgattagggttacgcgatc 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ttatcactgaaaattagaagtttcctaataaaaaggtaagctgattagggttacgcgatc 751


Query: 752 gctaagattaatatgacaataaactatcgatgcgcatatagattaataattctaacgttt 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gctaagattaatatgacaataaactatcgatgcgcatatagattaataattctaacgttt 811


Query: 812 ttattgtagttttaattgacatgtgtattttaaataattatattatacttacattataga 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ttattgtagttttaattgacatgtgtattttaaataattatattatacttacattataga 871


Query: 872 ttatttgaaatataagttt 890
|||||||||||||||||||
Sbjct: 872 ttatttgaaatataagttt 890


Score = 1189 bits (600), Expect = 0.0
Identities = 614/621 (98%)
Strand = Plus / Plus


Query: 1941 tccttcctttagtacgagaggactgaggtgggtcgatcactggtgtattaattattataa 2000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1941 tccttcctttagtacgagaggactgaggtgggtcgatcactggtgtattaattattataa 2000


Query: 2001 caatagtaccgttaagtagctacatcgaaatattaataatatatagtattattaagagag 2060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2001 caatagtaccgttaagtagctacatcgaaatattaataatatatagtattattaagagag 2060


Query: 2061 aactgctgaaaaaatattaagtaggaaacttattttagannnnnnnatagtcaggtaaaa 2120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2061 aactgctgaaaaaatattaagtaggaaacttattttagatttttttatagtcaggtaaaa 2120


Query: 2121 gattattactttgataggctacatatagaaatgaatagtaatataatataaaaatttgaa 2180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2121 gattattactttgataggctacatatagaaatgaatagtaatataatataaaaatttgaa 2180


Query: 2181 aaaatttttccattaattctataattaatgtgatcttatttattaagattagtaaagtag 2240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2181 aaaatttttccattaattctataattaatgtgatcttatttattaagattagtaaagtag 2240


Query: 2241 tactaaatatggatgacgtattttatatttcaaattatttttaacaaattatattattat 2300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2241 tactaaatatggatgacgtattttatatttcaaattatttttaacaaattatattattat 2300


Query: 2301 actttaatcaaatgacatcaggtggaatcgtacaaccaggccaaaatctctcacaacgtc 2360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2301 actttaatcaaatgacatcaggtggaatcgtacaaccaggccaaaatctctcacaacgtc 2360


Query: 2361 caataaacggcccaatatgggctggggaccagcagcaggaagtgccgcaaatccacgtgg 2420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2361 caataaacggcccaatatgggctggggaccagcagcaggaagtgccgcaaatccacgtgg 2420


Query: 2421 cgatctccgtggttacacttacaatattagatagtttcgctgtctatttctgaatattca 2480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2421 cgatctccgtggttacacttacaatattagatagtttcgctgtctatttctgaatattca 2480


Query: 2481 gaaatctttgtttaatgccaaaaatagtagatatctattatattttctcattttataaat 2540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2481 gaaatctttgtttaatgccaaaaatagtagatatctattatattttctcattttataaat 2540


Query: 2541 ctgataagatctgtcttaaat 2561
|||||||||||||||||||||
Sbjct: 2541 ctgataagatctgtcttaaat 2561


Score = 133 bits (67), Expect = 2e-30
Identities = 67/67 (100%)
Strand = Plus / Plus


Query: 1 cttaatagggtgtttcaagagttacatttattagacccgaaaccaagcgatctaattatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttaatagggtgtttcaagagttacatttattagacccgaaaccaagcgatctaattatg 60


Query: 61 aacacgc 67
|||||||
Sbjct: 61 aacacgc 67


Score = 40.1 bits (20), Expect = 0.017
Identities = 20/20 (100%)
Strand = Plus / Minus


Query: 2466 atttctgaatattcagaaat 2485
||||||||||||||||||||
Sbjct: 2485 atttctgaatattcagaaat 2466


>Contig-U12612-1 (Contig-U12612-1Q) /CSM_Contig/Contig-U12612-1Q.Seq.d
Length = 693

Score = 341 bits (172), Expect = 3e-93
Identities = 186/193 (96%)
Strand = Plus / Plus


Query: 2076 attaagtaggaaacttattttagannnnnnnatagtcaggtaaaagattattactttgat 2135
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 attaagtaggaaacttattttagatttttttatagtcaggtaaaagattattactttgat 60


Query: 2136 aggctacatatagaaatgaatagtaatataatataaaaatttgaaaaaatttttccatta 2195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggctacatatagaaatgaatagtaatataatataaaaatttgaaaaaatttttccatta 120


Query: 2196 attctataattaatgtgatcttatttattaagattagtaaagtagtactaaatatggatg 2255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attctataattaatgtgatcttatttattaagattagtaaagtagtactaaatatggatg 180


Query: 2256 acgtattttatat 2268
|||||||||||||
Sbjct: 181 acgtattttatat 193


>Contig-U16583-1 (Contig-U16583-1Q) /CSM_Contig/Contig-U16583-1Q.Seq.d
Length = 5048

Score = 42.1 bits (21), Expect = 0.004
Identities = 27/29 (93%)
Strand = Plus / Plus


Query: 1873 tgagctgggtttaaaacgtcgtgagacag 1901
||||||||||||| | |||||||||||||
Sbjct: 3900 tgagctgggtttagaccgtcgtgagacag 3928


Score = 42.1 bits (21), Expect = 0.004
Identities = 27/29 (93%)
Strand = Plus / Plus


Query: 1873 tgagctgggtttaaaacgtcgtgagacag 1901
||||||||||||| | |||||||||||||
Sbjct: 326 tgagctgggtttagaccgtcgtgagacag 354


Score = 42.1 bits (21), Expect = 0.004
Identities = 63/77 (81%)
Strand = Plus / Plus


Query: 1208 gtaaacggcggctgtaactatgacggtcctaaggtagcgaaattccttgtcgagtaattt 1267
||||||||||| ||||||||||| || ||||||||| |||| ||| ||| |||||
Sbjct: 3127 gtaaacggcgggagtaactatgactctcttaaggtagccaaatgcctcgtcatctaatta 3186


Query: 1268 tcgacgcgcatgaatgg 1284
|||||||||||||||
Sbjct: 3187 gtgacgcgcatgaatgg 3203


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 49,077
Number of Sequences: 8402
Number of extensions: 49077
Number of successful extensions: 4459
Number of sequences better than 10.0: 163
length of query: 2575
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2558
effective length of database: 7,932,708
effective search space: 20291867064
effective search space used: 20291867064
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 4.11
Homology vs DNA
Query= Contig-U16521-1 (Contig-U16521-1Q) /CSM_Contig/Contig-U16521-1Q.Seq.d
(2575 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(D16466) Dictyostelium discoideum mitochondrial genes for la... 1705 0.0 1
(AB000109) Dictyostelium discoideum mitochondrial DNA, compl... 1705 0.0 1
(DQ336395) Dictyostelium citrinum mitochondrion, complete ge... 1445 0.0 1
(U21880) Dictyostelium discoideum mitochondrion large subuni... 1402 0.0 3
(BJ404431) Dictyostelium discoideum cDNA clone:dds28b16, 3' ... 1267 0.0 1
(BJ323763) Dictyostelium discoideum cDNA clone:dda12k03, 5' ... 1241 0.0 1
(BJ426562) Dictyostelium discoideum cDNA clone:ddv59p08, 5' ... 1148 0.0 1
(BJ418310) Dictyostelium discoideum cDNA clone:ddv32g10, 5' ... 1112 0.0 1
(BJ366696) Dictyostelium discoideum cDNA clone:ddc39n22, 5' ... 1112 0.0 1
(BJ424610) Dictyostelium discoideum cDNA clone:ddv53b05, 5' ... 1043 0.0 2
(BJ406707) Dictyostelium discoideum cDNA clone:dds36n01, 3' ... 864 0.0 3
(BJ378991) Dictyostelium discoideum cDNA clone:ddc33o11, 3' ... 708 0.0 4
(EU339291) Dictyostelium purpureum strain WS321 tRNA-Pro gen... 369 0.0 11
(EU275726) Polysphondylium pallidum strain PN500 mitochondri... 280 0.0 22
(AY700145) Polysphondylium pallidum mitochondrion DNA, compl... 204 0.0 24
(BJ327510) Dictyostelium discoideum cDNA clone:dda20p14, 5' ... 936 0.0 2
(BJ373287) Dictyostelium discoideum cDNA clone:ddc2e18, 3' e... 714 0.0 3
(BJ360860) Dictyostelium discoideum cDNA clone:ddc8e12, 5' e... 611 0.0 2
(BJ380976) Dictyostelium discoideum cDNA clone:ddc39n22, 3' ... 605 0.0 4
(BJ443465) Dictyostelium discoideum cDNA clone:ddv53b05, 3' ... 638 0.0 3
(BJ359794) Dictyostelium discoideum cDNA clone:ddc2e18, 5' e... 706 0.0 2
(AU263801) Dictyostelium discoideum vegetative cDNA clone:VS... 837 0.0 3
(EU275727) Dictyostelium fasciculatum strain SH3 mitochondri... 186 0.0 26
(BJ363962) Dictyostelium discoideum cDNA clone:ddc29e07, 5' ... 603 0.0 3
(BJ376623) Dictyostelium discoideum cDNA clone:ddc29e07, 3' ... 527 0.0 4
(BJ431075) Dictyostelium discoideum cDNA clone:ddv9e20, 3' e... 541 0.0 3
(BJ445437) Dictyostelium discoideum cDNA clone:ddv59p08, 3' ... 321 0.0 7
(BJ364914) Dictyostelium discoideum cDNA clone:ddc33o11, 5' ... 779 0.0 2
(BJ387689) Dictyostelium discoideum cDNA clone:dds4a08, 5' e... 884 0.0 1
(BJ399115) Dictyostelium discoideum cDNA clone:dds4a08, 3' e... 381 0.0 4
(BJ412767) Dictyostelium discoideum cDNA clone:ddv9e20, 5' e... 553 0.0 2
(EC762758) PSE00006067 rw_mgpallid Polysphondylium pallidum ... 276 e-157 7
(BJ407422) Dictyostelium discoideum cDNA clone:dds38b18, 3' ... 315 e-146 4
(EC762737) PSE00007229 rw_mgpallid Polysphondylium pallidum ... 244 e-144 7
(BJ374515) Dictyostelium discoideum cDNA clone:ddc8e12, 3' e... 315 e-143 3
(EC762686) PSE00007195 rw_mgpallid Polysphondylium pallidum ... 262 e-141 7
(AF295546) Malawimonas jakobiformis mitochondrial DNA, compl... 139 e-140 14
(AU263802) Dictyostelium discoideum vegetative cDNA clone:VS... 345 e-139 2
(EC762572) PSE00007219 rw_mgpallid Polysphondylium pallidum ... 280 e-139 7
(EC762574) PSE00007748 rw_mgpallid Polysphondylium pallidum ... 280 e-137 6
(EC762806) PSE00001205 rw_mgpallid Polysphondylium pallidum ... 280 e-137 6
(EC762599) PSE00007132 rw_mgpallid Polysphondylium pallidum ... 280 e-137 6
(EC762448) PSE00006949 rw_mgpallid Polysphondylium pallidum ... 280 e-136 7
(EC762676) PSE00007979 rw_mgpallid Polysphondylium pallidum ... 280 e-136 6
(EC762072) PSE00007936 rw_mgpallid Polysphondylium pallidum ... 262 e-136 6
(EC762608) PSE00001277 rw_mgpallid Polysphondylium pallidum ... 204 e-135 7
(EC762644) PSE00007203 rw_mgpallid Polysphondylium pallidum ... 204 e-135 7
(EC762666) PSE00007245 rw_mgpallid Polysphondylium pallidum ... 204 e-135 7
(EC762783) PSE00007083 rw_mgpallid Polysphondylium pallidum ... 204 e-135 7
(EC762791) PSE00007109 rw_mgpallid Polysphondylium pallidum ... 204 e-135 7
(EC762801) PSE00006979 rw_mgpallid Polysphondylium pallidum ... 204 e-135 7
(EC762804) PSE00007168 rw_mgpallid Polysphondylium pallidum ... 204 e-135 7
(AY534144) Saprolegnia ferax strain ATCC 36051 mitochondion,... 133 e-134 18
(AY894835) Phytophthora infestans haplotype Ia mitochondrion... 133 e-134 17
(U17009) Phytophthora infestans mitochondrion, complete genome. 133 e-134 17
(AY898627) Phytophthora infestans haplotype IIa mitochondrio... 133 e-133 17
(EC762803) PSE00002199 rw_mgpallid Polysphondylium pallidum ... 234 e-133 7
(AY898628) Phytophthora infestans haplotype IIb mitochondrio... 133 e-132 17
(EC762452) PSE00007528 rw_mgpallid Polysphondylium pallidum ... 280 e-131 5
(EC762511) PSE00003243 rw_mgpallid Polysphondylium pallidum ... 190 e-131 7
(EC761984) PSE00006570 rw_mgpallid Polysphondylium pallidum ... 280 e-131 6
(EC761846) PSE00000017 rw_mgpallid Polysphondylium pallidum ... 262 e-131 6
(EC762463) PSE00007026 rw_mgpallid Polysphondylium pallidum ... 188 e-131 7
(EC762346) PSE00007768 rw_mgpallid Polysphondylium pallidum ... 280 e-131 6
(EC762573) PSE00005848 rw_mgpallid Polysphondylium pallidum ... 188 e-131 7
(EC762796) PSE00001632 rw_mgpallid Polysphondylium pallidum ... 188 e-131 7
(EC762025) PSE00004013 rw_mgpallid Polysphondylium pallidum ... 280 e-130 6
(EC762276) PSE00007130 rw_mgpallid Polysphondylium pallidum ... 192 e-130 7
(EC762098) PSE00006798 rw_mgpallid Polysphondylium pallidum ... 280 e-130 6
(EC762592) PSE00006943 rw_mgpallid Polysphondylium pallidum ... 266 e-130 6
(DQ832718) Phytophthora ramorum mitochondrion, complete genome. 133 e-130 16
(EU427470) Phytophthora ramorum strain CBS 101553 mitochondr... 133 e-130 16
(EC762409) PSE00007842 rw_mgpallid Polysphondylium pallidum ... 184 e-130 7
(EC762380) PSE00007094 rw_mgpallid Polysphondylium pallidum ... 280 e-130 6
(EC762764) PSE00001209 rw_mgpallid Polysphondylium pallidum ... 184 e-130 7
(AB201170) Undaria undarioides mitochondrial gene for 23S ri... 155 e-130 12
(EC762114) PSE00001380 rw_mgpallid Polysphondylium pallidum ... 188 e-129 7
(EC762064) PSE00007857 rw_mgpallid Polysphondylium pallidum ... 274 e-128 5
(EC762145) PSE00006556 rw_mgpallid Polysphondylium pallidum ... 184 e-128 7
(EC762564) PSE00007954 rw_mgpallid Polysphondylium pallidum ... 178 e-128 7
(EC762026) PSE00001363 rw_mgpallid Polysphondylium pallidum ... 236 e-128 6
(EC762613) PSE00004793 rw_mgpallid Polysphondylium pallidum ... 178 e-128 7
(AU061974) Dictyostelium discoideum slug cDNA, clone SLG831. 361 e-128 2
(BJ336261) Dictyostelium discoideum cDNA clone:dda53e09, 5' ... 361 e-128 2
(BJ425809) Dictyostelium discoideum cDNA clone:ddv56m19, 5' ... 361 e-128 2
(BJ335669) Dictyostelium discoideum cDNA clone:dda51k04, 5' ... 361 e-128 2
(BJ368531) Dictyostelium discoideum cDNA clone:ddc47g06, 5' ... 361 e-128 2
(BJ395326) Dictyostelium discoideum cDNA clone:dds38p11, 5' ... 361 e-128 2
(AU039157) Dictyostelium discoideum slug cDNA, clone SSM456. 361 e-128 2
(AU038167) Dictyostelium discoideum slug cDNA, clone SSH363. 361 e-128 2
(AU052316) Dictyostelium discoideum slug cDNA, clone SLD134. 361 e-128 2
(AU038558) Dictyostelium discoideum slug cDNA, clone SSH866. 361 e-128 2
(BJ387690) Dictyostelium discoideum cDNA clone:dds4a12, 5' e... 361 e-128 2
(C93348) Dictyostelium discoideum slug cDNA, clone SSM657. 361 e-128 2
(AU039159) Dictyostelium discoideum slug cDNA, clone SSM458. 361 e-128 2
(AU263244) Dictyostelium discoideum vegetative cDNA clone:VS... 361 e-128 2
(AU038748) Dictyostelium discoideum slug cDNA, clone SSL432. 361 e-128 2
(AU037999) Dictyostelium discoideum slug cDNA, clone SSH141. 361 e-128 2
(AU052428) Dictyostelium discoideum slug cDNA, clone SLD302. 361 e-128 2
(AB201168) Undaria pinnatifida mitochondrial gene for 23S ri... 155 e-127 12
(AB201167) Undaria pinnatifida mitochondrial gene for 23S ri... 155 e-127 12
(AB201166) Undaria pinnatifida mitochondrial gene for 23S ri... 155 e-127 12
(AB201169) Undaria undarioides mitochondrial gene for 23S ri... 155 e-127 12
(DQ832717) Phytophthora sojae mitochondrion, complete genome. 133 e-127 15
(EC761654) PSE00005321 rw_mgpallid Polysphondylium pallidum ... 280 e-127 5
(EC761730) PSE00000307 rw_mgpallid Polysphondylium pallidum ... 280 e-127 5
(EC761752) PSE00007253 rw_mgpallid Polysphondylium pallidum ... 280 e-127 5
(EC761819) PSE00008216 rw_mgpallid Polysphondylium pallidum ... 280 e-127 5
(EC761901) PSE00007452 rw_mgpallid Polysphondylium pallidum ... 280 e-127 5
(EC762065) PSE00000216 rw_mgpallid Polysphondylium pallidum ... 174 e-127 7
(EC762530) PSE00006929 rw_mgpallid Polysphondylium pallidum ... 204 e-127 7
(EC762354) PSE00008367 rw_mgpallid Polysphondylium pallidum ... 174 e-127 7
(EC762468) PSE00001328 rw_mgpallid Polysphondylium pallidum ... 174 e-127 7
(EC762653) PSE00007938 rw_mgpallid Polysphondylium pallidum ... 174 e-127 7
(EC762558) PSE00006538 rw_mgpallid Polysphondylium pallidum ... 174 e-127 7
(EC762658) PSE00006812 rw_mgpallid Polysphondylium pallidum ... 174 e-127 7
(EC762697) PSE00001449 rw_mgpallid Polysphondylium pallidum ... 190 e-127 6
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 361 e-126 2
(EC762551) PSE00006764 rw_mgpallid Polysphondylium pallidum ... 172 e-126 7
(EC762634) PSE00007963 rw_mgpallid Polysphondylium pallidum ... 172 e-126 7
(EC761618) PSE00007856 rw_mgpallid Polysphondylium pallidum ... 280 e-126 5
(BJ364166) Dictyostelium discoideum cDNA clone:ddc30h10, 5' ... 355 e-126 2
(C92383) Dictyostelium discoideum slug cDNA, clone SSE721. 361 e-126 2
(BJ325149) Dictyostelium discoideum cDNA clone:dda13a01, 5' ... 361 e-126 2
(AU037345) Dictyostelium discoideum slug cDNA, clone SSD505. 355 e-126 2
(AU039185) Dictyostelium discoideum slug cDNA, clone SSM492. 361 e-126 2
(AU270216) Dictyostelium discoideum vegetative cDNA clone:VS... 361 e-126 2
(EC761739) PSE00007929 rw_mgpallid Polysphondylium pallidum ... 266 e-126 5
(BJ396107) Dictyostelium discoideum cDNA clone:dds41k12, 5' ... 361 e-125 2
(C24633) Dictyostelium discoideum slug cDNA, clone SL-X032. 361 e-125 2
(BJ425875) Dictyostelium discoideum cDNA clone:ddv57j07, 5' ... 361 e-125 2
(BJ431000) Dictyostelium discoideum cDNA clone:ddv9d14, 3' e... 361 e-125 2
(BJ396361) Dictyostelium discoideum cDNA clone:dds42l18, 5' ... 361 e-125 2
(AU060633) Dictyostelium discoideum slug cDNA, clone SLK685. 361 e-125 2
(AU039011) Dictyostelium discoideum slug cDNA, clone SSM270. 361 e-125 2
(BJ391866) Dictyostelium discoideum cDNA clone:dds25b15, 5' ... 361 e-125 2
(AU261332) Dictyostelium discoideum vegetative cDNA clone:VS... 361 e-125 2
(BJ338580) Dictyostelium discoideum cDNA clone:dda62j01, 5' ... 361 e-125 2
(BJ329857) Dictyostelium discoideum cDNA clone:dda26d15, 5' ... 361 e-125 2
(C92012) Dictyostelium discoideum slug cDNA, clone SSC787. 361 e-125 2
(C93900) Dictyostelium discoideum slug cDNA, clone SSL844. 361 e-125 2
(BJ368822) Dictyostelium discoideum cDNA clone:ddc48p06, 5' ... 353 e-125 2
(AU038670) Dictyostelium discoideum slug cDNA, clone SSL327. 361 e-125 2
(AU038297) Dictyostelium discoideum slug cDNA, clone SSH532. 361 e-125 2
(C92496) Dictyostelium discoideum slug cDNA, clone SSE850. 361 e-125 2
(EC762262) PSE00004361 rw_mgpallid Polysphondylium pallidum ... 168 e-125 7
(EC762581) PSE00007893 rw_mgpallid Polysphondylium pallidum ... 172 e-125 7
(EC761496) PSE00006985 rw_mgpallid Polysphondylium pallidum ... 280 e-125 5
(C90987) Dictyostelium discoideum slug cDNA, clone SSJ385. 361 e-125 2
(EC762332) PSE00008339 rw_mgpallid Polysphondylium pallidum ... 167 e-124 7
(EC762486) PSE00008167 rw_mgpallid Polysphondylium pallidum ... 280 e-124 6
(EC762620) PSE00006909 rw_mgpallid Polysphondylium pallidum ... 280 e-124 5
(AC116922) Dictyostelium discoideum chromosome 2 map 6061442... 361 e-124 2
(BJ349508) Dictyostelium discoideum cDNA clone:dda36o18, 3' ... 349 e-124 2
(EC761542) PSE00006684 rw_mgpallid Polysphondylium pallidum ... 274 e-123 5
(BJ412695) Dictyostelium discoideum cDNA clone:ddv9d14, 5' e... 355 e-123 2
(BJ403550) Dictyostelium discoideum cDNA clone:dds25b15, 3' ... 355 e-123 2
(AU038100) Dictyostelium discoideum slug cDNA, clone SSH270. 355 e-123 2
(EC762210) PSE00001235 rw_mgpallid Polysphondylium pallidum ... 242 e-123 6
(EC762419) PSE00006729 rw_mgpallid Polysphondylium pallidum ... 163 e-123 7
(EC762774) PSE00006922 rw_mgpallid Polysphondylium pallidum ... 172 e-123 9
(AF007261) Reclinomonas americana mitochondrion, complete ge... 127 e-123 17
(BJ391577) Dictyostelium discoideum cDNA clone:dds24n12, 5' ... 361 e-123 2
(C93297) Dictyostelium discoideum slug cDNA, clone SSM539. 353 e-123 2
(C91476) Dictyostelium discoideum slug cDNA, clone SSK327. 361 e-123 2
(AU039468) Dictyostelium discoideum slug cDNA, clone SLH840. 361 e-123 2
(AU036981) Dictyostelium discoideum slug cDNA, clone SSA346. 361 e-123 2
(AU038718) Dictyostelium discoideum slug cDNA, clone SSL389. 361 e-123 2
(DD279226) Method for judgment of Laminaria species. 155 e-122 15
(AJ133711) Rickettsia australis 23S rRNA gene, partial. 139 e-122 17
(EF494739) Blastocystis sp. DMP/02-328 mitochondrion, comple... 127 e-122 14
(EC762529) PSE00006618 rw_mgpallid Polysphondylium pallidum ... 165 e-122 7
(AY309483) Unknown marine alpha proteobacterium JP57 23S rib... 123 e-122 16
(AU037258) Dictyostelium discoideum slug cDNA, clone SSB681. 355 e-122 2
(AU262887) Dictyostelium discoideum vegetative cDNA clone:VS... 347 e-122 2
(BJ330837) Dictyostelium discoideum cDNA clone:dda32m24, 5' ... 361 e-122 2
(AU262745) Dictyostelium discoideum vegetative cDNA clone:VS... 361 e-122 2
(AU262319) Dictyostelium discoideum vegetative cDNA clone:VS... 361 e-122 2
(Y13128) Rickettsia rhipicephali fmt gene (partial) and 23S ... 139 e-122 16
(EC761591) PSE00007111 rw_mgpallid Polysphondylium pallidum ... 280 e-121 4
(BJ371607) Dictyostelium discoideum cDNA clone:ddc58a23, 5' ... 212 e-121 3
(BJ397354) Dictyostelium discoideum cDNA clone:dds46b02, 5' ... 212 e-121 3
(AU267870) Dictyostelium discoideum vegetative cDNA clone:VS... 323 e-121 3
(BJ399117) Dictyostelium discoideum cDNA clone:dds4a12, 3' e... 323 e-121 3
(BJ356994) Dictyostelium discoideum cDNA clone:dda62j01, 3' ... 347 e-121 2
(C90471) Dictyostelium discoideum slug cDNA, clone SSI576. 361 e-121 2
(BJ403220) Dictyostelium discoideum cDNA clone:dds24n12, 3' ... 355 e-121 2
(EC762398) PSE00008385 rw_mgpallid Polysphondylium pallidum ... 172 e-121 7
(BJ354336) Dictyostelium discoideum cDNA clone:dda53e09, 3' ... 321 e-121 3
(BJ352314) Dictyostelium discoideum cDNA clone:dda46h10, 3' ... 321 e-121 3
(BJ407411) Dictyostelium discoideum cDNA clone:dds38p11, 3' ... 321 e-121 3
(BJ357123) Dictyostelium discoideum cDNA clone:dda62d17, 3' ... 321 e-121 3
(BJ342222) Dictyostelium discoideum cDNA clone:dda13a01, 3' ... 321 e-121 3
(AF222718) Chrysodidymus synuroideus mitochondrion, complete... 127 e-121 13
(C92621) Dictyostelium discoideum slug cDNA, clone SSF535. 361 e-120 2
(BJ351688) Dictyostelium discoideum cDNA clone:dda44e10, 3' ... 319 e-120 3
(EC762583) PSE00006874 rw_mgpallid Polysphondylium pallidum ... 133 e-120 8
(EC762088) PSE00006612 rw_mgpallid Polysphondylium pallidum ... 172 e-120 7
(EC761649) PSE00006769 rw_mgpallid Polysphondylium pallidum ... 262 e-120 5
(AU038814) Dictyostelium discoideum slug cDNA, clone SSL517. 361 e-120 2
(AU074611) Dictyostelium discoideum slug cDNA, clone SSL370. 335 e-120 2
(AU074610) Dictyostelium discoideum slug cDNA, clone SSL368. 335 e-120 2
(AU074126) Dictyostelium discoideum slug cDNA, clone SSJ569. 335 e-120 2
(Y13122) Rickettsia conorii fmt gene (partial) and 23S rRNA ... 139 e-120 17
(Y13124) Rickettsia sibirica fmt gene (partial) and 23S rRNA... 139 e-120 17
(Y13123) Rickettsia parkeri fmt gene (partial) and 23S rRNA ... 139 e-120 17
(EC762402) PSE00007114 rw_mgpallid Polysphondylium pallidum ... 151 e-120 7
(EC763026) PSE00001299 rw_mgpallid Polysphondylium pallidum ... 172 e-120 10
(EC762336) PSE00005299 rw_mgpallid Polysphondylium pallidum ... 280 e-120 4
(EC762369) PSE00007380 rw_mgpallid Polysphondylium pallidum ... 280 e-119 3
(EC761802) PSE00005569 rw_mgpallid Polysphondylium pallidum ... 280 e-119 3
(AU270217) Dictyostelium discoideum vegetative cDNA clone:VS... 323 e-119 3
(EC762404) PSE00004705 rw_mgpallid Polysphondylium pallidum ... 172 e-119 7
(EF494740) Blastocystis sp. NandII mitochondrion, complete g... 127 e-119 15
(AJ133712) Rickettsia canada 23S rRNA gene, partial. 139 e-119 16
(Y13125) Rickettsia rickettsii fmt gene (partial) and 23S rR... 139 e-119 17
(BJ347244) Dictyostelium discoideum cDNA clone:dda26d15, 3' ... 323 e-119 3
(BJ340212) Dictyostelium discoideum cDNA clone:dda12k03, 3' ... 375 e-119 4
(BJ383740) Dictyostelium discoideum cDNA clone:ddc47g06, 3' ... 349 e-119 2
(AU261812) Dictyostelium discoideum vegetative cDNA clone:VS... 361 e-119 2
(AU038510) Dictyostelium discoideum slug cDNA, clone SSH809. 361 e-119 2
(AU074230) Dictyostelium discoideum slug cDNA, clone SSJ863. 361 e-119 2
(AU073791) Dictyostelium discoideum slug cDNA, clone SSI378. 361 e-119 2
(EC762782) PSE00007074 rw_mgpallid Polysphondylium pallidum ... 172 e-119 9
(AY309484) Erythrobacter sp. JP13.1 23S ribosomal RNA gene, ... 149 e-119 16
(EC762799) PSE00008033 rw_mgpallid Polysphondylium pallidum ... 172 e-119 9
(Y13133) Rickettsia typhi fmt gene (partial) and 23S rRNA gene. 135 e-118 16
(EC762123) PSE00001138 rw_mgpallid Polysphondylium pallidum ... 172 e-118 7
(AY309491) Sphingomonas sp. KT0216 23S ribosomal RNA gene, p... 131 e-118 17
(EC762588) PSE00003894 rw_mgpallid Polysphondylium pallidum ... 172 e-118 7
(EC762720) PSE00008058 rw_mgpallid Polysphondylium pallidum ... 172 e-118 9
(C91118) Dictyostelium discoideum slug cDNA, clone SSJ595. 337 e-118 2
(C91179) Dictyostelium discoideum slug cDNA, clone SSJ778. 361 e-118 2
(AY309486) Unknown marine alpha proteobacterium JP66.1 23S r... 129 e-118 15
(EC762478) PSE00007382 rw_mgpallid Polysphondylium pallidum ... 280 e-118 5
(U11015) Rickettsia bellii 23S rRNA and 5S rRNA genes, parti... 131 e-118 16
(EC761479) PSE00001160 rw_mgpallid Polysphondylium pallidum ... 274 e-118 4
(EC761557) PSE00006677 rw_mgpallid Polysphondylium pallidum ... 274 e-118 4
(AJ344328) Laminaria digitata complete mitochondrial genome. 155 e-118 15
(EC761781) PSE00002724 rw_mgpallid Polysphondylium pallidum ... 280 e-118 5
(EC762528) PSE00006962 rw_mgpallid Polysphondylium pallidum ... 172 e-117 8
(AY500368) Dictyota dichotoma mitochondrion, complete genome. 159 e-117 14
(AE008594) Rickettsia conorii str. Malish 7, section 26 of 1... 141 e-116 19
(EC762046) PSE00006021 rw_mgpallid Polysphondylium pallidum ... 172 e-116 7
(EC761898) PSE00000870 rw_mgpallid Polysphondylium pallidum ... 172 e-116 7
(EC762215) PSE00004158 rw_mgpallid Polysphondylium pallidum ... 172 e-116 7
(FJ410394) Ochrobactrum anthropi ATCC:49188 16S ribosomal RN... 117 e-116 17
(DI086811) DNA Probe Derived from ITS for Detection of Infec... 117 e-116 17
(DI058997) DNA Probe Derived from 23S rRNA Gene for Detectio... 117 e-116 17
(C92079) Dictyostelium discoideum slug cDNA, clone SSD368. 353 e-116 2
(C92537) Dictyostelium discoideum slug cDNA, clone SSE586. 347 e-116 2
(U11018) Rickettsia prowazekii 23S rRNA and 5S rRNA genes, p... 135 e-116 16
(AY244379) Ochrobactrum anthropi strain IAM 14119 23S riboso... 129 e-116 17
(AY244380) Phyllobacterium myrsinacearum strain IAM 13584 23... 129 e-116 17
(Y13127) Rickettsia montana fmt gene (partial) and 23S rRNA ... 139 e-116 16
(BJ386587) Dictyostelium discoideum cDNA clone:ddc58a23, 3' ... 349 e-116 2
(BJ444607) Dictyostelium discoideum cDNA clone:ddv56m19, 3' ... 321 e-116 2
(EC762472) PSE00008277 rw_mgpallid Polysphondylium pallidum ... 137 e-116 7
(EC762440) PSE00006936 rw_mgpallid Polysphondylium pallidum ... 133 e-115 8
(EC762410) PSE00003980 rw_mgpallid Polysphondylium pallidum ... 172 e-115 7
(AY500367) Desmarestia viridis mitochondrion, complete genome. 155 e-115 12
(EC762386) PSE00008372 rw_mgpallid Polysphondylium pallidum ... 172 e-115 8
(Y13129) Rickettsia akari fmt gene (partial) and 23S rRNA gene. 139 e-115 15
(EC762010) PSE00003381 rw_mgpallid Polysphondylium pallidum ... 172 e-115 7
(BJ348340) Dictyostelium discoideum cDNA clone:dda32m24, 3' ... 321 e-115 3
(EC762042) PSE00006699 rw_mgpallid Polysphondylium pallidum ... 172 e-115 7
(EU523376) Candidatus Liberibacter asiaticus strain GuangXi-... 129 e-115 15
(EC762751) PSE00007978 rw_mgpallid Polysphondylium pallidum ... 172 e-115 9
(X88894) Z.ramigera DNA for 23S ribosomal RNA. 129 e-115 16
(EU644449) Candidatus Liberibacter asiaticus strain Sihui rr... 129 e-114 16
(DQ414689) Caedibacter caryophilus 23S ribosomal RNA gene, p... 127 e-114 14
(EC762819) PSE00002885 rw_mgpallid Polysphondylium pallidum ... 172 e-114 9
(EC762695) PSE00008345 rw_mgpallid Polysphondylium pallidum ... 172 e-114 9
(EC762771) PSE00007671 rw_mgpallid Polysphondylium pallidum ... 172 e-114 9
(EC762732) PSE00006539 rw_mgpallid Polysphondylium pallidum ... 172 e-114 9
(EC762729) PSE00007789 rw_mgpallid Polysphondylium pallidum ... 172 e-114 9
(X71839) R.palustris 16S rRNA gene. 113 e-114 14
(EC762759) PSE00005531 rw_mgpallid Polysphondylium pallidum ... 172 e-114 9
(AU060267) Dictyostelium discoideum slug cDNA, clone SLA791. 361 e-114 2
(EL774346) PUNA433TV Pythium ultimum ESTs Pythium ultimum DA... 131 e-114 11
(EU679659) Sphingobium chungbukense rrnB operon, complete se... 131 e-114 17
(EC762519) PSE00006810 rw_mgpallid Polysphondylium pallidum ... 172 e-114 8
(EU679660) Sphingobium chungbukense rrnC operon, complete se... 131 e-114 17
(EU679658) Sphingobium chungbukense rrnA operon, complete se... 131 e-114 17
(EC762683) PSE00007205 rw_mgpallid Polysphondylium pallidum ... 172 e-113 9
(AF220147) Brucella melitensis ribosomal RNA operon A, compl... 129 e-113 16
(AF220148) Brucella melitensis ribosomal RNA operon B, compl... 129 e-113 16
(AF220149) Brucella melitensis ribosomal RNA operon C, compl... 129 e-113 16
(Z49077) Rickettsia prowazekii fmt gene for L-methionyl-tRNA... 135 e-113 16
(BJ409606) Dictyostelium discoideum cDNA clone:dds42l18, 3' ... 341 e-113 2
(EC762243) PSE00004156 rw_mgpallid Polysphondylium pallidum ... 176 e-113 6
(AU073244) Dictyostelium discoideum slug cDNA, clone SSG473. 343 e-113 2
(EC762647) PSE00002949 rw_mgpallid Polysphondylium pallidum ... 172 e-113 8
(EU754742) Candidatus Liberibacter americanus strain Sao Pau... 129 e-113 16
(EC762428) PSE00008289 rw_mgpallid Polysphondylium pallidum ... 172 e-113 8
(EC762493) PSE00008079 rw_mgpallid Polysphondylium pallidum ... 172 e-113 8
(BJ384089) Dictyostelium discoideum cDNA clone:ddc48p06, 3' ... 313 e-113 3
(EC761412) PSE00007584 rw_mgpallid Polysphondylium pallidum ... 272 e-113 5
(EC762786) PSE00001454 rw_mgpallid Polysphondylium pallidum ... 172 e-113 9
(EC762648) PSE00000266 rw_mgpallid Polysphondylium pallidum ... 172 e-113 9
(EC762664) PSE00004244 rw_mgpallid Polysphondylium pallidum ... 172 e-113 9
(EC762693) PSE00007221 rw_mgpallid Polysphondylium pallidum ... 172 e-113 9
(EC762680) PSE00006942 rw_mgpallid Polysphondylium pallidum ... 172 e-113 9
(EC762383) PSE00007704 rw_mgpallid Polysphondylium pallidum ... 172 e-113 7
(AF416765) Ehrlichia chaffeensis strain Arkansas 23S ribosom... 109 e-113 16
(EU697971) Rhizobium huautlense strain CCNWNX0072 23S riboso... 123 e-113 17
(EC762182) PSE00001724 rw_mgpallid Polysphondylium pallidum ... 172 e-112 7
(EC762709) PSE00006569 rw_mgpallid Polysphondylium pallidum ... 172 e-112 8
(EC761349) PSE00004434 rw_mgpallid Polysphondylium pallidum ... 280 e-112 5
(EC762022) PSE00003124 rw_mgpallid Polysphondylium pallidum ... 172 e-112 7
(EC762177) PSE00000111 rw_mgpallid Polysphondylium pallidum ... 172 e-112 7
(C89671) Dictyostelium discoideum slug cDNA, clone SSA576. 345 e-112 2
(EC762615) PSE00005082 rw_mgpallid Polysphondylium pallidum ... 172 e-112 9
(BJ418737) Dictyostelium discoideum cDNA clone:ddv33g19, 5' ... 418 e-112 1
(EU697972) Rhizobium gallicum strain CCNWNX0077 23S ribosoma... 123 e-112 16
(EC762602) PSE00006890 rw_mgpallid Polysphondylium pallidum ... 172 e-112 9
(AY244358) Mesorhizobium amorphae strain ACCC 19665 23S ribo... 119 e-112 16
(AY244370) Rhizobium vitis strain ATCC 49767 23S ribosomal R... 129 e-112 16
(AY244364) Mesorhizobium loti strain USDA 3471 23S ribosomal... 119 e-112 16
(AY244366) Mesorhizobium huakuii strain USDA 4779 23S riboso... 119 e-112 16
(EC762239) PSE00000060 rw_mgpallid Polysphondylium pallidum ... 172 e-112 8
(EC762688) PSE00001563 rw_mgpallid Polysphondylium pallidum ... 172 e-112 9
(AY244361) Rhizobium leguminosarum strain USDA 2370 23S ribo... 129 e-112 16
(C92646) Dictyostelium discoideum slug cDNA, clone SSF679. 361 e-112 2
(AU072856) Dictyostelium discoideum slug cDNA, clone SSF244. 353 e-112 2
(AU071533) Dictyostelium discoideum slug cDNA, clone SSB751. 307 e-112 2
(EU697970) Mesorhizobium loti strain CCNWNX0066 23S ribosoma... 119 e-111 16
(EU697969) Mesorhizobium loti strain CCNWNX0062 23S ribosoma... 119 e-111 16
(EU697967) Mesorhizobium loti strain CCNWNX0060 23S ribosoma... 119 e-111 16
(EU795092) Uncultured bacterium ARCTIC09_D_04 genomic sequence. 115 e-111 18
(EC761828) PSE00006825 rw_mgpallid Polysphondylium pallidum ... 172 e-111 7
(EU697968) Mesorhizobium loti strain CCNWNX0058 23S ribosoma... 119 e-111 16
(EU754741) Candidatus Liberibacter africanus strain Mpumalan... 129 e-111 15
(EC762526) PSE00001465 rw_mgpallid Polysphondylium pallidum ... 172 e-111 6
(AU037273) Dictyostelium discoideum slug cDNA, clone SSB696. 329 e-111 2
(AU052964) Dictyostelium discoideum slug cDNA, clone SLF392. 361 e-111 2
(EF030096) Acidiphilium multivorum 23S ribosomal RNA gene, p... 131 e-111 16
(EC762482) PSE00007569 rw_mgpallid Polysphondylium pallidum ... 172 e-111 8
(EC762271) PSE00006714 rw_mgpallid Polysphondylium pallidum ... 133 e-111 8
(AY244375) Rhizobium huautlense strain USDA 4900 23S ribosom... 123 e-111 17
(EC761794) PSE00005051 rw_mgpallid Polysphondylium pallidum ... 172 e-111 7
(EC762546) PSE00007991 rw_mgpallid Polysphondylium pallidum ... 172 e-111 9
(EC761859) PSE00007136 rw_mgpallid Polysphondylium pallidum ... 172 e-111 7
(AE009462) Brucella melitensis 16M chromosome I, section 19 ... 129 e-110 16
(AE009657) Brucella melitensis 16M chromosome II, section 19... 129 e-110 16
(AU074623) Dictyostelium discoideum slug cDNA, clone SSL389. 303 e-110 2
(AE009481) Brucella melitensis 16M chromosome I, section 38 ... 129 e-110 16
(EC762458) PSE00007038 rw_mgpallid Polysphondylium pallidum ... 172 e-110 9
(DQ008818) Acorus gramineus large subunit ribosomal RNA gene... 100 e-110 15
(EC762611) PSE00005923 rw_mgpallid Polysphondylium pallidum ... 172 e-110 9
(EC761921) PSE00007821 rw_mgpallid Polysphondylium pallidum ... 133 e-110 7
(EC761864) PSE00008081 rw_mgpallid Polysphondylium pallidum ... 133 e-110 7
(EC762364) PSE00004725 rw_mgpallid Polysphondylium pallidum ... 133 e-110 7
(DQ306696) Phenylobacterium lituiforme 23S ribosomal RNA gen... 125 e-110 16
(AY244362) Rhizobium gallicum strain USDA 2918 23S ribosomal... 123 e-110 16
(AF184625) Rhodopseudomonas palustris ribosomal RNA operon r... 113 e-110 14
(AF410946) Bartonella quintana 23S ribosomal RNA gene, parti... 129 e-110 14
(AF184626) Rhodopseudomonas palustris ribosomal RNA operon r... 113 e-110 14
(EC761681) PSE00002650 rw_mgpallid Polysphondylium pallidum ... 172 e-110 7
(EC762456) PSE00008155 rw_mgpallid Polysphondylium pallidum ... 172 e-110 9
(EC762640) PSE00002167 rw_mgpallid Polysphondylium pallidum ... 172 e-110 9
(EC762682) PSE00007150 rw_mgpallid Polysphondylium pallidum ... 172 e-109 9
(EC762612) PSE00000185 rw_mgpallid Polysphondylium pallidum ... 172 e-109 9
(EC761906) PSE00007048 rw_mgpallid Polysphondylium pallidum ... 133 e-109 7
(EU795181) Uncultured bacterium HF0070_02E07 genomic sequence. 127 e-109 13
(EC762061) PSE00004453 rw_mgpallid Polysphondylium pallidum ... 133 e-109 7
(X87283) B.lupini 23S rRNA gene, DSM 30140. 107 e-109 14
(X71840) B.japonicum 16S rRNA gene. 107 e-109 14
(EC762292) PSE00008324 rw_mgpallid Polysphondylium pallidum ... 133 e-109 7
(EC762341) PSE00007712 rw_mgpallid Polysphondylium pallidum ... 133 e-109 7
(EC762227) PSE00007885 rw_mgpallid Polysphondylium pallidum ... 172 e-109 9
(EC762224) PSE00008035 rw_mgpallid Polysphondylium pallidum ... 133 e-109 8
(EC762033) PSE00004230 rw_mgpallid Polysphondylium pallidum ... 172 e-109 7
(AB290027) Asaia lannaensis gene for 23S rRNA, partial seque... 131 e-109 17
(AB290026) Asaia lannaensis gene for 23S rRNA, partial seque... 131 e-109 17
(AY244365) Rhizobium galegae strain USDA 4128 23S ribosomal ... 129 e-109 17
(DQ306697) Caulobacteraceae bacterium PLB 23S ribosomal RNA ... 125 e-109 17
(EC761861) PSE00008295 rw_mgpallid Polysphondylium pallidum ... 133 e-109 7
(AY494079) Fucus vesiculosus mitochondrion, complete genome. 155 e-109 14
(AY244377) Rhizobium rhizogenes strain IAM 13570 23S ribosom... 117 e-109 16
(EC761078) PSE00001781 rw_mgpallid Polysphondylium pallidum ... 242 e-109 4
(EC762454) PSE00008151 rw_mgpallid Polysphondylium pallidum ... 165 e-109 8
(EC762333) PSE00006815 rw_mgpallid Polysphondylium pallidum ... 172 e-108 9
(X87288) B.diminuta 23S rRNA gene. 125 e-108 16
(AB257083) Gluconobacter oxydans gene for 23S rRNA, partial ... 125 e-108 17
(EC761776) PSE00000078 rw_mgpallid Polysphondylium pallidum ... 172 e-108 7
(EC761309) PSE00007318 rw_mgpallid Polysphondylium pallidum ... 188 e-108 6
(AU271469) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 406 e-108 1
(AU271468) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 406 e-108 1
(EC762689) PSE00002462 rw_mgpallid Polysphondylium pallidum ... 172 e-108 7
(EC762606) PSE00008027 rw_mgpallid Polysphondylium pallidum ... 172 e-108 7
(AY244360) Sinorhizobium fredii strain USDA 205 23S ribosoma... 117 e-108 16
(AY244381) Sinorhizobium arboris strain USDA 4878 23S riboso... 117 e-108 16
(AY244371) Rhizobium tropici strain USDA 9030 23S ribosomal ... 117 e-108 16
(AY244372) Rhizobium etli strain USDA 9032 23S ribosomal RNA... 117 e-108 16
(AY244369) Sinorhizobium terangae strain USDA 4894 23S ribos... 117 e-108 16
(AY244382) Sinorhizobium kostiense strain USDA 4905 23S ribo... 117 e-108 16
(EF030095) Acidocella sp. GS19h 23S ribosomal RNA gene, part... 125 e-108 16
(AY244368) Sinorhizobium saheli strain USDA 4893 23S ribosom... 117 e-108 16
(BJ408488) Dictyostelium discoideum cDNA clone:dds46b02, 3' ... 319 e-108 2
(AU071812) Dictyostelium discoideum slug cDNA, clone SSC566. 295 e-108 2
(AU072277) Dictyostelium discoideum slug cDNA, clone SSD884. 295 e-108 2
(EC762005) PSE00007067 rw_mgpallid Polysphondylium pallidum ... 172 e-108 8
(EC762471) PSE00007926 rw_mgpallid Polysphondylium pallidum ... 172 e-108 9
(U11022) Rickettsia rickettsii 23S rRNA and 5S rRNA genes, p... 139 e-108 16
(EC762554) PSE00007764 rw_mgpallid Polysphondylium pallidum ... 172 e-108 9
(L39095) Bartonella bacilliformis 23S ribosomal RNA (23S rRN... 129 e-108 15
(U03732) Acanthamoeba castellanii Neff mitochondrion rRNA la... 72 e-108 18
(EC761395) PSE00006676 rw_mgpallid Polysphondylium pallidum ... 170 e-108 6
(AY484593) Bartonella quintana 23S ribosomal RNA gene, parti... 129 e-107 14
(AB255432) Kozakia baliensis gene for 23S rRNA, partial sequ... 131 e-107 17
(EC761731) PSE00003225 rw_mgpallid Polysphondylium pallidum ... 172 e-107 7
(EF494738) Blastocystis sp. BT-1 tRNA-Asn, tRNA-Leu, tRNA-Me... 117 e-107 13
(DQ011937) Bradyrhizobium denitrificans strain USDA 4366 23S... 107 e-107 14
(EC761738) PSE00007371 rw_mgpallid Polysphondylium pallidum ... 133 e-107 7
(AU272494) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 402 e-107 1
(EC761843) PSE00007888 rw_mgpallid Polysphondylium pallidum ... 133 e-107 7
(EC761850) PSE00008321 rw_mgpallid Polysphondylium pallidum ... 133 e-107 7
(EC761863) PSE00007913 rw_mgpallid Polysphondylium pallidum ... 133 e-107 7
(DQ008830) Brasenia schreberi large subunit ribosomal RNA ge... 107 e-107 16
(DQ008822) Hedyosmum arborescens large subunit ribosomal RNA... 100 e-107 15
(EC762212) PSE00001233 rw_mgpallid Polysphondylium pallidum ... 133 e-107 7
(EC762502) PSE00006225 rw_mgpallid Polysphondylium pallidum ... 133 e-107 7
(EC762299) PSE00005187 rw_mgpallid Polysphondylium pallidum ... 133 e-107 7
(EC762304) PSE00007218 rw_mgpallid Polysphondylium pallidum ... 133 e-107 7
(C93842) Dictyostelium discoideum slug cDNA, clone SSL778. 329 e-107 4
(EC762103) PSE00008136 rw_mgpallid Polysphondylium pallidum ... 172 e-107 8
(DQ008817) Acorus calamus large subunit ribosomal RNA gene, ... 100 e-107 14
(AB255434) Swaminathania salitolerans gene for 23S rRNA, par... 131 e-107 17
(AB255431) Asaia krungthepensis gene for 23S rRNA, partial s... 131 e-107 17
(AB255430) Asaia siamensis gene for 23S rRNA, partial sequen... 131 e-107 17
(AB255429) Asaia bogorensis gene for 23S rRNA, partial seque... 131 e-107 17
(DQ011939) Bradyrhizobium denitrificans strain USDA 4409 23S... 107 e-106 15
(EU650389) Coffea liberica isolate CCC1025 26S ribosomal RNA... 100 e-106 15
(AY309492) Roseobacter sp. KT0917 23S ribosomal RNA gene, pa... 115 e-106 13
(EC762306) PSE00001460 rw_mgpallid Polysphondylium pallidum ... 133 e-106 7
(EC762208) PSE00007559 rw_mgpallid Polysphondylium pallidum ... 133 e-106 7
(DQ008831) Cabomba sp. Qiu 97027 large subunit ribosomal RNA... 100 e-106 15
(AF338177) Afipia felis 16S ribosomal RNA gene, partial sequ... 107 e-106 14
(EC762144) PSE00001058 rw_mgpallid Polysphondylium pallidum ... 172 e-106 8
(EC762639) PSE00006679 rw_mgpallid Polysphondylium pallidum ... 172 e-106 8
(AF410943) Bartonella henselae 23S ribosomal RNA gene, parti... 129 e-106 14
(EC762323) PSE00001286 rw_mgpallid Polysphondylium pallidum ... 172 e-106 8
(U69638) Bradyrhizobium japonicum 16S ribosomal RNA gene, pa... 107 e-106 14
(EC762503) PSE00004868 rw_mgpallid Polysphondylium pallidum ... 172 e-106 8
(AU051859) Dictyostelium discoideum slug cDNA, clone SSB318. 319 e-106 2
(EC762416) PSE00007849 rw_mgpallid Polysphondylium pallidum ... 172 e-106 8
(U28505) Agrobacterium vitis ribosomal RNA operon 16S riboso... 131 e-106 16
(EU795192) Uncultured bacterium HF0500_24B12 genomic sequence. 155 e-106 16
(EC761814) PSE00005653 rw_mgpallid Polysphondylium pallidum ... 172 e-106 8
(AU272493) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 398 e-106 1
(U45329) Agrobacterium vitis ribosomal operon 16S rRNA, 23S ... 129 e-106 16
(EC762268) PSE00006674 rw_mgpallid Polysphondylium pallidum ... 133 e-106 7
(AY244363) Mesorhizobium mediterraneum strain USDA 3383 23S ... 90 e-106 18
(EC762436) PSE00006945 rw_mgpallid Polysphondylium pallidum ... 133 e-106 7
(EC762293) PSE00000192 rw_mgpallid Polysphondylium pallidum ... 172 e-106 8
(EC762137) PSE00000919 rw_mgpallid Polysphondylium pallidum ... 172 e-106 8
(EC762228) PSE00005607 rw_mgpallid Polysphondylium pallidum ... 172 e-106 8
(AY309488) Unknown marine alpha proteobacterium JP7.1 23S ri... 115 e-106 15
(EC762283) PSE00006373 rw_mgpallid Polysphondylium pallidum ... 172 e-106 8
(EC762273) PSE00008186 rw_mgpallid Polysphondylium pallidum ... 172 e-106 8
(EU697973) Sinorhizobium meliloti strain CCNWNX0089 23S ribo... 109 e-106 16
(EC762366) PSE00003965 rw_mgpallid Polysphondylium pallidum ... 172 e-106 8
(X02559) Oenothera berteriana mitochondrial gene for 26S rib... 100 e-106 15
(DQ008803) Takhtajania perrieri large subunit ribosomal RNA ... 100 e-106 15
(DQ008802) Tasmannia insipida large subunit ribosomal RNA ge... 100 e-106 15
(EC762334) PSE00006577 rw_mgpallid Polysphondylium pallidum ... 172 e-105 8
(DQ008801) Drimys winteri large subunit ribosomal RNA gene, ... 100 e-105 15
(DQ008820) Sarcandra chloranthoides large subunit ribosomal ... 100 e-105 15
(AY244359) Sinorhizobium meliloti strain ATCC 9930 23S ribos... 117 e-105 16
(EC762106) PSE00006735 rw_mgpallid Polysphondylium pallidum ... 172 e-105 7
(EC762319) PSE00007044 rw_mgpallid Polysphondylium pallidum ... 133 e-105 7
(EC761816) PSE00003966 rw_mgpallid Polysphondylium pallidum ... 172 e-105 8
(EU686599) Uncultured bacterium AD347-E12 genomic sequence. 115 e-105 14
(EC762008) PSE00007889 rw_mgpallid Polysphondylium pallidum ... 172 e-105 8
(EC762083) PSE00007251 rw_mgpallid Polysphondylium pallidum ... 172 e-105 8
(EU650385) Coffea arabica 26S ribosomal RNA gene, partial se... 100 e-105 15
(EU795209) Uncultured bacterium HF4000_48A13 genomic sequence. 123 e-105 15
(EC762357) PSE00007941 rw_mgpallid Polysphondylium pallidum ... 172 e-105 8
(EC762394) PSE00007841 rw_mgpallid Polysphondylium pallidum ... 172 e-105 8
(AB255433) Neoasaia chiangmaiensis gene for 23S rRNA, partia... 123 e-105 17
(EC762318) PSE00006928 rw_mgpallid Polysphondylium pallidum ... 172 e-105 9
(EC762483) PSE00007230 rw_mgpallid Polysphondylium pallidum ... 172 e-105 9
(EU795179) Uncultured bacterium HF0010_10C01 genomic sequence. 123 e-105 16
(EC762001) PSE00000323 rw_mgpallid Polysphondylium pallidum ... 172 e-105 7
(EC761627) PSE00000206 rw_mgpallid Polysphondylium pallidum ... 133 e-105 7
(DQ011943) Bradyrhizobium denitrificans strain USDA 4435 23S... 107 e-105 14
(EC761974) PSE00003068 rw_mgpallid Polysphondylium pallidum ... 172 e-105 7
(EC761844) PSE00004509 rw_mgpallid Polysphondylium pallidum ... 172 e-105 7
(EC761989) PSE00004703 rw_mgpallid Polysphondylium pallidum ... 172 e-105 7
(EC762085) PSE00005930 rw_mgpallid Polysphondylium pallidum ... 172 e-105 7
(EC762092) PSE00007940 rw_mgpallid Polysphondylium pallidum ... 172 e-105 7
(Z35330) B.japonicum (110) genes for 16S, 23S, 5S ribosomal ... 107 e-105 14
(EC762139) PSE00006026 rw_mgpallid Polysphondylium pallidum ... 172 e-105 7
(EC762815) PSE00003100 rw_mgpallid Polysphondylium pallidum ... 172 e-105 7
(EC762735) PSE00007144 rw_mgpallid Polysphondylium pallidum ... 172 e-105 7
(EC762669) PSE00008166 rw_mgpallid Polysphondylium pallidum ... 172 e-105 7
(EC762121) PSE00001181 rw_mgpallid Polysphondylium pallidum ... 172 e-105 7
(EC762353) PSE00002917 rw_mgpallid Polysphondylium pallidum ... 172 e-105 7
(EC762027) PSE00003957 rw_mgpallid Polysphondylium pallidum ... 172 e-105 7

>(D16466) Dictyostelium discoideum mitochondrial genes for large
subunit rRNA, Gln-tRNA, Trp-tRNA, cytochrome b, NADH
dehydrogenase subunit 3, Cys-tRNA, Asn-tRNA, small
subunit rRNA, fMet-tRNA, Lys-tRNA, Arg-tRNA, NADH
dehydrogenase subunit 1, NADH dehydrogenase subunit 6,
Pro-tRNA, ATPase subunit 9, Met-tRNA, complete sequence
and cds.
Length = 13232

Score = 1705 bits (860), Expect = 0.0
Identities = 860/860 (100%)
Strand = Plus / Plus


Query: 943 cgtacttaaaccgacactggttaattgatagaatatattaaagtgtagaatgaatgattc 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3207 cgtacttaaaccgacactggttaattgatagaatatattaaagtgtagaatgaatgattc 3266


Query: 1003 tgaaggaactcggcaaaataactccgtaactgcgggagaaggagagcctttgttgtaaaa 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3267 tgaaggaactcggcaaaataactccgtaactgcgggagaaggagagcctttgttgtaaaa 3326


Query: 1063 aatgaaggtcacagtaaagaaggggtggcgactgtttaataaaaacacaggattctgcaa 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3327 aatgaaggtcacagtaaagaaggggtggcgactgtttaataaaaacacaggattctgcaa 3386


Query: 1123 aatggcaacatgatgtatagggtctgcgacctgcccggtgctccaagaggaagaggagaa 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3387 aatggcaacatgatgtatagggtctgcgacctgcccggtgctccaagaggaagaggagaa 3446


Query: 1183 ctgcaaggtttgaattgaagtctgagtaaacggcggctgtaactatgacggtcctaaggt 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3447 ctgcaaggtttgaattgaagtctgagtaaacggcggctgtaactatgacggtcctaaggt 3506


Query: 1243 agcgaaattccttgtcgagtaattttcgacgcgcatgaatggtgtaacgacctccccact 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3507 agcgaaattccttgtcgagtaattttcgacgcgcatgaatggtgtaacgacctccccact 3566


Query: 1303 gtctccagaatcacttcgatgaaattgaactttccgtgaagatgcggaatattagcagct 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3567 gtctccagaatcacttcgatgaaattgaactttccgtgaagatgcggaatattagcagct 3626


Query: 1363 agacggaaagaccctatgcaccttaacttcacgcatatattgtgcaacatttttaattac 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3627 agacggaaagaccctatgcaccttaacttcacgcatatattgtgcaacatttttaattac 3686


Query: 1423 gtaggatacttatgatgcttatgatcttttggttttggccaatttaaaggaggcgctggt 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3687 gtaggatacttatgatgcttatgatcttttggttttggccaatttaaaggaggcgctggt 3746


Query: 1483 gaaatagtaagtatattagaaaaatagtactcaaacatgataatgtatgccgggtagttt 1542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3747 gaaatagtaagtatattagaaaaatagtactcaaacatgataatgtatgccgggtagttt 3806


Query: 1543 gactggggcggtaaccttctaaagagtaacgaaggtgtataaaggtaaactcaaaataaa 1602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3807 gactggggcggtaaccttctaaagagtaacgaaggtgtataaaggtaaactcaaaataaa 3866


Query: 1603 ctggttagttatttggtgagtgtaatggcataagtttgcttgactgaaagacctacaagt 1662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3867 ctggttagttatttggtgagtgtaatggcataagtttgcttgactgaaagacctacaagt 3926


Query: 1663 cgatcagagacgcaagtcgatcatagtgatccaatagttctgtgtggaaaggctattgct 1722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3927 cgatcagagacgcaagtcgatcatagtgatccaatagttctgtgtggaaaggctattgct 3986


Query: 1723 aacggataaaaggtacgctagggataacaggctagtcacatattagagttcatatctgtt 1782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3987 aacggataaaaggtacgctagggataacaggctagtcacatattagagttcatatctgtt 4046


Query: 1783 atgtggttcggcacctcgat 1802
||||||||||||||||||||
Sbjct: 4047 atgtggttcggcacctcgat 4066

Score = 1402 bits (707), Expect(3) = 0.0
Identities = 707/707 (100%)
Strand = Plus / Plus


Query: 172 gttttttacgaaatctatctaggtagaacggtggtatattgtttattattatttgaaaaa 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2436 gttttttacgaaatctatctaggtagaacggtggtatattgtttattattatttgaaaaa 2495


Query: 232 gtcttaataaacattattaaagcaatttaataaaagaaaatttatagaggtagagcactg 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2496 gtcttaataaacattattaaagcaatttaataaaagaaaatttatagaggtagagcactg 2555


Query: 292 aatggttcaacctaaggttattatttaaacttcgaatactataaataaattgaccactag 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2556 aatggttcaacctaaggttattatttaaacttcgaatactataaataaattgaccactag 2615


Query: 352 gcagactatgagcgctaaggtccataggtctaaagggaaacagcccagattgtaagttaa 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2616 gcagactatgagcgctaaggtccataggtctaaagggaaacagcccagattgtaagttaa 2675


Query: 412 tgttcttaaataatagtgtagtgtcaaaggcatggagaaagtgatgttaattggaaagta 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2676 tgttcttaaataatagtgtagtgtcaaaggcatggagaaagtgatgttaattggaaagta 2735


Query: 472 ggattggaagcgaccatcttttaaagaaagcgtaaaagctcaccaatttaaggcgttctc 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2736 ggattggaagcgaccatcttttaaagaaagcgtaaaagctcaccaatttaaggcgttctc 2795


Query: 532 tagccaacaatgtacaggaactcaacattatacagaaactacaaaattataacattggta 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2796 tagccaacaatgtacaggaactcaacattatacagaaactacaaaattataacattggta 2855


Query: 592 gtaaaatgttccgtataattgtgaagttaactcaagaagagataatggagttatcggaat 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2856 gtaaaatgttccgtataattgtgaagttaactcaagaagagataatggagttatcggaat 2915


Query: 652 taagaatgctgatatgagtaatgttaataaggttaagaccttatcactgaaaattagaag 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2916 taagaatgctgatatgagtaatgttaataaggttaagaccttatcactgaaaattagaag 2975


Query: 712 tttcctaataaaaaggtaagctgattagggttacgcgatcgctaagattaatatgacaat 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2976 tttcctaataaaaaggtaagctgattagggttacgcgatcgctaagattaatatgacaat 3035


Query: 772 aaactatcgatgcgcatatagattaataattctaacgtttttattgtagttttaattgac 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3036 aaactatcgatgcgcatatagattaataattctaacgtttttattgtagttttaattgac 3095


Query: 832 atgtgtattttaaataattatattatacttacattatagattatttg 878
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3096 atgtgtattttaaataattatattatacttacattatagattatttg 3142

Score = 163 bits (82), Expect(3) = 0.0
Identities = 85/86 (98%)
Strand = Plus / Plus


Query: 92 ggcggaacccgtaactgttgcaaaagtttgggatgatttgtgattaggggtgaaaggcta 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2357 ggcggaacccgtaactgttgcaaaagtttgggatgatttgtgattaggggtgaaaggcta 2416


Query: 152 atcaagcttggtgatagctggttttt 177
|||||||||||||||||||| |||||
Sbjct: 2417 atcaagcttggtgatagctgtttttt 2442

Score = 133 bits (67), Expect(3) = 0.0
Identities = 67/67 (100%)
Strand = Plus / Plus


Query: 1 cttaatagggtgtttcaagagttacatttattagacccgaaaccaagcgatctaattatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2266 cttaatagggtgtttcaagagttacatttattagacccgaaaccaagcgatctaattatg 2325


Query: 61 aacacgc 67
|||||||
Sbjct: 2326 aacacgc 2332

Score = 315 bits (159), Expect(5) = e-178
Identities = 159/159 (100%)
Strand = Plus / Plus


Query: 1941 tccttcctttagtacgagaggactgaggtgggtcgatcactggtgtattaattattataa 2000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4752 tccttcctttagtacgagaggactgaggtgggtcgatcactggtgtattaattattataa 4811


Query: 2001 caatagtaccgttaagtagctacatcgaaatattaataatatatagtattattaagagag 2060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4812 caatagtaccgttaagtagctacatcgaaatattaataatatatagtattattaagagag 4871


Query: 2061 aactgctgaaaaaatattaagtaggaaacttattttaga 2099
|||||||||||||||||||||||||||||||||||||||
Sbjct: 4872 aactgctgaaaaaatattaagtaggaaacttattttaga 4910

Score = 236 bits (119), Expect(5) = e-178
Identities = 119/119 (100%)
Strand = Plus / Plus


Query: 1803 gtcggcttaacacatcccggagttgaaaaagtttccaagggttggggtgttcacccatta 1862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4614 gtcggcttaacacatcccggagttgaaaaagtttccaagggttggggtgttcacccatta 4673


Query: 1863 aagtgttacatgagctgggtttaaaacgtcgtgagacagtttggtccctatctactgtt 1921
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4674 aagtgttacatgagctgggtttaaaacgtcgtgagacagtttggtccctatctactgtt 4732

Score = 97.6 bits (49), Expect(5) = e-178
Identities = 49/49 (100%)
Strand = Plus / Plus


Query: 2210 gtgatcttatttattaagattagtaaagtagtactaaatatggatgacg 2258
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5021 gtgatcttatttattaagattagtaaagtagtactaaatatggatgacg 5069

Score = 83.8 bits (42), Expect(5) = e-178
Identities = 42/42 (100%)
Strand = Plus / Plus


Query: 2107 atagtcaggtaaaagattattactttgataggctacatatag 2148
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4918 atagtcaggtaaaagattattactttgataggctacatatag 4959

Score = 28.2 bits (14), Expect(5) = e-178
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 1739 gctagggataacag 1752
||||||||||||||
Sbjct: 1046 gctagggataacag 1059

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 2,582,991,892
Number of extensions: 152737819
Number of successful extensions: 12636113
Number of sequences better than 10.0: 91809
Length of query: 2575
Length of database: 101,790,757,118
Length adjustment: 25
Effective length of query: 2550
Effective length of database: 99,238,119,368
Effective search space: 253057204388400
Effective search space used: 253057204388400
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.28
Homology vs Protein
Query= Contig-U16521-1 (Contig-U16521-1Q) /CSM_Contig/Contig-U16521-1Q.Seq.d
(2575 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

CP001230_1127(CP001230|pid:none) Persephonella marina EX-H1, com... 108 1e-21
AC146792_21(AC146792|pid:none) Medicago truncatula clone mth2-32... 101 2e-19
AP006628_250(AP006628|pid:none) Onion yellows phytoplasma OY-M D... 75 3e-19
AP009386_1890(AP009386|pid:none) Burkholderia multivorans ATCC 1... 69 6e-19
EU754742_1(EU754742|pid:none) Candidatus Liberibacter americanus... 67 3e-18
CP001607_1316(CP001607|pid:none) Aggregatibacter aphrophilus NJ8... 71 4e-16
CP000789_180(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 chr... 69 9e-16
AE015927_147(AE015927|pid:none) Clostridium tetani E88, complete... 61 7e-15
CP000382_166(CP000382|pid:none) Clostridium novyi NT, complete g... 67 7e-15
AP010904_342(AP010904|pid:none) Desulfovibrio magneticus RS-1 DN... 86 9e-15
CP000382_1687(CP000382|pid:none) Clostridium novyi NT, complete ... 67 1e-14
AE017197_194(AE017197|pid:none) Rickettsia typhi str. Wilmington... 71 2e-14
AE016795_1006(AE016795|pid:none) Vibrio vulnificus CMCP6 chromos... 69 3e-14
CP001581_3747(CP001581|pid:none) Clostridium botulinum A2 str. K... 65 9e-14
AC116957_51(AC116957|pid:none) Dictyostelium discoideum chromoso... 57 2e-13
AM946981_3841(AM946981|pid:none) Escherichia coli BL21, complete... 72 8e-11
CP000468_3976(CP000468|pid:none) Escherichia coli APEC O1, compl... 72 8e-11
BA000001_226(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, c... 69 1e-10
F81737(F81737)hypothetical protein TC0129 [imported] - Chlamydia... 70 3e-10
AM946981_202(AM946981|pid:none) Escherichia coli BL21, complete ... 69 7e-10
CP001172_16(CP001172|pid:none) Acinetobacter baumannii AB307-029... 69 9e-10
AM180252_1147(AM180252|pid:none) Lawsonia intracellularis PHE/MN... 69 1e-09
CP000243_3648(CP000243|pid:none) Escherichia coli UTI89, complet... 68 1e-09
CP000155_1516(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 65 1e-08
AC151668_11(AC151668|pid:none) Medicago truncatula clone mth2-6e... 62 8e-08
AM085146_13(AM085146|pid:none) Magnetospirillum gryphiswaldense ... 60 2e-07
CP000930_2263(CP000930|pid:none) Heliobacterium modesticaldum Ic... 59 7e-07
AY228468_298(AY228468|pid:none) Pinus koraiensis chloroplast, co... 57 3e-06
(Q3BAI2) RecName: Full=Uncharacterized protein ORF91; &AY916449... 56 6e-06
EU430725_1(EU430725|pid:none) Cupressus sempervirens clone CYPLP... 50 5e-04
AM180252_1148(AM180252|pid:none) Lawsonia intracellularis PHE/MN... 32 0.001
AP009608_803(AP009608|pid:none) Mycoplasma fermentans PG18 DNA, ... 48 0.002
EU414948_2(EU414948|pid:none) Flammeovirga yaeyamensis strain MY... 47 0.003
AJ970716_1(AJ970716|pid:none) Candidatus Phytoplasma solani part... 36 0.004
AB178790_2(AB178790|pid:none) Thermoproteus sp. IC-062 genes for... 46 0.008
BA000023_1278(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 44 0.023
AC151668_10(AC151668|pid:none) Medicago truncatula clone mth2-6e... 35 0.044
CP000783_3563(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 33 0.12
EF157669_7(EF157669|pid:none) Uncultured beta proteobacterium CB... 32 0.12
AC146331_23(AC146331|pid:none) Medicago truncatula clone mth2-7h... 41 0.25
AC151709_9(AC151709|pid:none) Medicago truncatula clone mth2-31g... 32 0.35
AE017220_3331(AE017220|pid:none) Salmonella enterica subsp. ente... 37 2.8
AE016827_1732(AE016827|pid:none) Mannheimia succiniciproducens M... 37 4.8

>CP001230_1127(CP001230|pid:none) Persephonella marina EX-H1, complete
genome. &CP001230_1898(CP001230|pid:none)
Length = 189

Score = 108 bits (270), Expect = 1e-21
Identities = 70/134 (52%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Frame = -1

Query: 1375 GLSV*LLIFRIFTESSISSK*FWRQWGGRYTIHARRKLLDKEFRYLRTVIVTAAVYSDFN 1196
GLSV + I T+++IS RQ G R+TIHA R L DKEFRY RTVIVTAAVY F
Sbjct: 52 GLSVLPRVVGILTDTTISPGLSSRQRGDRWTIHAGRNLPDKEFRYHRTVIVTAAVYPGFG 111

Query: 1195 SNLAVLLFLLEHRAGRRPYTSCCHFAESCVFIKQSPPLLYCD----LHFLQQRLSFSRSY 1028
S LA L H AG P+TS FA+ CVF KQSPP +CD L+ SRSY
Sbjct: 112 SRLAPLPLTYGHWAGFTPHTSSFEFAQCCVFGKQSPPPGFCDPLPHLNGTACGHPLSRSY 171

Query: 1027 GVILPSSFRIIHST 986
GV LPSS R + T
Sbjct: 172 GVNLPSSLRRVTPT 185

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 4,137,606,593
Number of extensions: 81553497
Number of successful extensions: 153502
Number of sequences better than 10.0: 43
Number of HSP's gapped: 153467
Number of HSP's successfully gapped: 76
Length of query: 858
Length of database: 1,061,185,681
Length adjustment: 138
Effective length of query: 720
Effective length of database: 610,139,857
Effective search space: 439300697040
Effective search space used: 439300697040
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.85 gvh: 0.53 alm: 0.31 top: 0.57 tms: 0.07 mit: 0.23 mip: 0.05
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.28 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 1.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

48.0 %: nuclear
28.0 %: cytoplasmic
12.0 %: mitochondrial
8.0 %: Golgi
4.0 %: vesicles of secretory system

>> prediction for Contig-U16521-1 is nuc

VS (DIR, S) 9
VH (FL, L) 5
VF (FL, S) 2
AH (FL, L) 0
AF (FL, S) 2
SL (DIR, L) 3
SS (DIR, S) 0
SH (FL, L) 3
SF (FL, S) 1
CH (FL, L) 3
CF (FL, S) 2
FCL (DIR, L) 0
FC (DIR, S) 7
FC-IC (SUB) 2