Contig-U03323-1
Contig ID Contig-U03323-1
Contig update 2001. 8.29
Contig sequence
>Contig-U03323-1 (Contig-U03323-1Q) /CSM_Contig/Contig-U03323-1Q.Seq.d
ACATGTGACATTACTATTGGTAAATGTCAATGTTTAAAAAATACATGGTC
AGGTTCAGATTGTTCAATTCCATATCAAGTTATTAGATCGGTTAATGAAT
CAACAACAGCAGGTGGTGAAGCAACTTTTGAAGGTGTTTTTGGAGATGTT
CATCAAGGTATTAAAATGCAAATTGGTGGTATTGATTGTCCAATAATATT
TAATTCATCAACTATTATTAAATGTATGGCACCAGAAGGTAACGGAATTA
AAAAAGTAACATTATTCCAAAATGATATTTATTATACCTATGATAAATAT
AAATATAAAGCAATTGAATTGTCATGTCCATCAAATTGTTTAGGTAATGG
TATTTGTAATACATCAACTGGAGAATGTAAATGTAATTCAGGTTATGGAT
CATACGATTGTTCTCCAATAATCAATAATGGTGGTGGTGGTGGTTTAGGT
GAAACCCCCAATAGTAATAGTAATAGTGGTGAACTAGTTATCCCACCAAA
ATCAAATACTACATTAAATGAAGAAACAGGTGG

Gap no gap
Contig length 533
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 4820223
End point 4820756
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 1
Link to clone list U03323
List of clone(s)

est1=FC-IC0176F,1,534
Translated Amino Acid sequence
TCDITIGKCQCLKNTWSGSDCSIPYQVIRSVNESTTAGGEATFEGVFGDVHQGIKMQIGG
IDCPIIFNSSTIIKCMAPEGNGIKKVTLFQNDIYYTYDKYKYKAIELSCPSNCLGNGICN
TSTGECKCNSGYGSYDCSPIINNGGGGGLGETPNSNSNSGELVIPPKSNTTLNEETG


Translated Amino Acid sequence (All Frames)
Frame A:
TCDITIGKCQCLKNTWSGSDCSIPYQVIRSVNESTTAGGEATFEGVFGDVHQGIKMQIGG
IDCPIIFNSSTIIKCMAPEGNGIKKVTLFQNDIYYTYDKYKYKAIELSCPSNCLGNGICN
TSTGECKCNSGYGSYDCSPIINNGGGGGLGETPNSNSNSGELVIPPKSNTTLNEETG


Frame B:
hvtlllvnvnv*kihgqvqivqfhiklldrlmnqqqqvvkqllkvflemfikvlkcklvv
livq*ylihqlllnvwhqkvtelkk*hyskmifiipmininikqlnchvhqiv*vmvfvi
hqlenvnviqvmdhtivlq*simvvvvv*vkppivivivvn*lshqnqilh*mkkqv


Frame C:
m*hyyw*msmfkkymvrfrlfnsissy*ig**innsrw*snf*rcfwrcssry*nanwwy
*lsnni*finyy*mygtrr*rn*ksniipk*yllyl**i*i*sn*ivmsiklfr*wyl*y
inwrm*m*frlwiirlfsnnq*wwwwwfr*npq*****w*tsyptkikyyik*rnrw


own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U03323-1 (Contig-U03323-1Q)
/CSM_Contig/Contig-U03323-1Q.Seq.d
(533 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U03323-1 (Contig-U03323-1Q) /CSM_Contig/Conti... 1057 0.0
Contig-U11847-1 (Contig-U11847-1Q) /CSM_Contig/Conti... 46 4e-05
Contig-U11390-1 (Contig-U11390-1Q) /CSM_Contig/Conti... 42 6e-04
Contig-U10742-1 (Contig-U10742-1Q) /CSM_Contig/Conti... 42 6e-04
Contig-U12394-1 (Contig-U12394-1Q) /CSM_Contig/Conti... 40 0.002
Contig-U11424-1 (Contig-U11424-1Q) /CSM_Contig/Conti... 40 0.002
Contig-U11407-1 (Contig-U11407-1Q) /CSM_Contig/Conti... 40 0.002
Contig-U11391-1 (Contig-U11391-1Q) /CSM_Contig/Conti... 40 0.002
Contig-U10908-1 (Contig-U10908-1Q) /CSM_Contig/Conti... 40 0.002
Contig-U09476-1 (Contig-U09476-1Q) /CSM_Contig/Conti... 40 0.002

>Contig-U03323-1 (Contig-U03323-1Q) /CSM_Contig/Contig-U03323-1Q.Seq.d
Length = 533

Score = 1057 bits (533), Expect = 0.0
Identities = 533/533 (100%)
Strand = Plus / Plus


Query: 1 acatgtgacattactattggtaaatgtcaatgtttaaaaaatacatggtcaggttcagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acatgtgacattactattggtaaatgtcaatgtttaaaaaatacatggtcaggttcagat 60


Query: 61 tgttcaattccatatcaagttattagatcggttaatgaatcaacaacagcaggtggtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttcaattccatatcaagttattagatcggttaatgaatcaacaacagcaggtggtgaa 120


Query: 121 gcaacttttgaaggtgtttttggagatgttcatcaaggtattaaaatgcaaattggtggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaacttttgaaggtgtttttggagatgttcatcaaggtattaaaatgcaaattggtggt 180


Query: 181 attgattgtccaataatatttaattcatcaactattattaaatgtatggcaccagaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attgattgtccaataatatttaattcatcaactattattaaatgtatggcaccagaaggt 240


Query: 241 aacggaattaaaaaagtaacattattccaaaatgatatttattatacctatgataaatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacggaattaaaaaagtaacattattccaaaatgatatttattatacctatgataaatat 300


Query: 301 aaatataaagcaattgaattgtcatgtccatcaaattgtttaggtaatggtatttgtaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaatataaagcaattgaattgtcatgtccatcaaattgtttaggtaatggtatttgtaat 360


Query: 361 acatcaactggagaatgtaaatgtaattcaggttatggatcatacgattgttctccaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acatcaactggagaatgtaaatgtaattcaggttatggatcatacgattgttctccaata 420


Query: 421 atcaataatggtggtggtggtggtttaggtgaaacccccaatagtaatagtaatagtggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcaataatggtggtggtggtggtttaggtgaaacccccaatagtaatagtaatagtggt 480


Query: 481 gaactagttatcccaccaaaatcaaatactacattaaatgaagaaacaggtgg 533
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaactagttatcccaccaaaatcaaatactacattaaatgaagaaacaggtgg 533


>Contig-U11847-1 (Contig-U11847-1Q) /CSM_Contig/Contig-U11847-1Q.Seq.d
Length = 2023

Score = 46.1 bits (23), Expect = 4e-05
Identities = 29/31 (93%)
Strand = Plus / Plus


Query: 422 tcaataatggtggtggtggtggtttaggtga 452
|||||| ||||||| ||||||||||||||||
Sbjct: 1185 tcaatagtggtggtagtggtggtttaggtga 1215


>Contig-U11390-1 (Contig-U11390-1Q) /CSM_Contig/Contig-U11390-1Q.Seq.d
Length = 3022

Score = 42.1 bits (21), Expect = 6e-04
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 424 aataatggtggtggtggtggt 444
|||||||||||||||||||||
Sbjct: 1311 aataatggtggtggtggtggt 1331


Score = 32.2 bits (16), Expect = 0.58
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 429 tggtggtggtggtggt 444
||||||||||||||||
Sbjct: 1319 tggtggtggtggtggt 1334


Score = 30.2 bits (15), Expect = 2.3
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 65 caattccatatcaagttat 83
||||||||||| |||||||
Sbjct: 20 caattccatataaagttat 38


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,879
Number of Sequences: 6905
Number of extensions: 12879
Number of successful extensions: 2375
Number of sequences better than 10.0: 745
length of query: 533
length of database: 5,674,871
effective HSP length: 16
effective length of query: 517
effective length of database: 5,564,391
effective search space: 2876790147
effective search space used: 2876790147
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 5.31
Homology vs DNA
Query= Contig-U03323-1 (Contig-U03323-1Q) /CSM_Contig/Contig-U03323-1Q.Seq.d
(533 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 1057 0.0 1
(AU271392) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 1057 0.0 1
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 46 2e-08 7
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 38 9e-05 7
(AL110498) Caenorhabditis elegans YAC Y64G10A. 52 2e-04 3
(BJ391617) Dictyostelium discoideum cDNA clone:dds24h17, 5' ... 42 3e-04 2
(FM992692) Candida dubliniensis CD36 chromosome 5, complete ... 44 0.002 10
(CR936397) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 0.004 7
(CU861609) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.015 2
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 48 0.017 7
(EY089168) CAZI18758.fwd CAZI Artemisia annua normalized lea... 36 0.018 2
(BX004764) Zebrafish DNA sequence from clone DKEY-162L4 in l... 42 0.019 7
(CR382400) Plasmodium falciparum chromosome 6, complete sequ... 34 0.020 9
(AC182244) Bos taurus clone CH240-331K6, WORKING DRAFT SEQUE... 52 0.022 1
(AC006704) Caenorhabditis elegans clone Y108G3a, *** SEQUENC... 52 0.022 1
(CK581920) IST_WI5_37592 AD-wrmcDNA library Caenorhabditis e... 52 0.022 1
(AE014297) Drosophila melanogaster chromosome 3R, complete s... 34 0.041 2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 34 0.046 11
(AC011615) Drosophila melanogaster, chromosome 3R, region 89... 34 0.054 2
(AC007647) Drosophila melanogaster, chromosome 3R, region 89... 34 0.054 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 36 0.055 9
(AC008292) Drosophila melanogaster strain y chromosome 3 clo... 34 0.057 2
(AC020444) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 34 0.057 2
(CQ614690) Sequence 42448 from Patent WO0171042. 34 0.065 2
(FI480908) CH322-76N22.y CHORI-322 Drosophila melanogaster g... 34 0.070 2
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 38 0.072 9
(AE014819) Plasmodium falciparum 3D7 chromosome 14 section 4... 38 0.073 7
(AC230801) Bos taurus clone CH240-498M15, WORKING DRAFT SEQU... 50 0.087 1
(AC230096) Bos taurus clone CH240-521N4, WORKING DRAFT SEQUE... 50 0.087 1
(CZ256672) LQCX088TV Painted Turtle BAC Library Chrysemys pi... 50 0.087 1
(CZ256458) LQCX051TV Painted Turtle BAC Library Chrysemys pi... 50 0.087 1
(CK982223) 4114611 BARC 9BOV Bos taurus cDNA clone 9BOV44_A0... 50 0.087 1
(CK982166) 4114943 BARC 9BOV Bos taurus cDNA clone 9BOV44_N2... 50 0.087 1
(CB168786) CWI602769113.R1 CSEQFXL41 testes Bos taurus cDNA,... 50 0.087 1
(FE029926) C0009488A05.P1KM13F KN511 Ovis aries rectum and l... 50 0.087 1
(AW462453) BP230009A20G11 Soares normalized bovine placenta ... 50 0.087 1
(CT025701) Mouse DNA sequence from clone RP24-68C7 on chromo... 48 0.087 2
(CN767487) Tp_1685 Tyrophagus putrescentiae cDNA library Tyr... 40 0.100 2
(AC013573) Homo sapiens clone RP11-2G10, WORKING DRAFT SEQUE... 46 0.10 6
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 42 0.13 9
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 34 0.15 7
(FM992691) Candida dubliniensis CD36 chromosome 4, complete ... 36 0.18 2
(AC095424) Rattus norvegicus clone CH230-7A8, *** SEQUENCING... 34 0.19 2
(AC127156) Rattus norvegicus clone CH230-7B10, *** SEQUENCIN... 34 0.19 2
(AC112086) Rattus norvegicus clone CH230-332D11, *** SEQUENC... 34 0.19 2
(AC119130) Rattus norvegicus clone CH230-414I23, *** SEQUENC... 34 0.19 2
(AC128469) Rattus norvegicus clone CH230-55G13, *** SEQUENCI... 38 0.20 2
(AC115510) Rattus norvegicus clone CH230-383C9, *** SEQUENCI... 34 0.20 2
(AC201416) Strongylocentrotus purpuratus clone R3-17P1, WORK... 40 0.21 4
(FM992695) Candida dubliniensis CD36 chromosome R, complete ... 40 0.22 14
(AM101328) Lutzomyia longipalpis EST clone NSFM-72e02, seque... 38 0.25 2
(AY232270) Dictyostelium discoideum putative protein Roco8 (... 38 0.26 2
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 34 0.29 4
(FM992694) Candida dubliniensis CD36 chromosome 7, complete ... 40 0.30 12
(CN766820) Tp_0579 Tyrophagus putrescentiae cDNA library Tyr... 38 0.34 2
(AC154889) Bos taurus clone CH240-27I14, WORKING DRAFT SEQUE... 48 0.34 1
(AC181321) Strongylocentrotus purpuratus clone R3-115E19, WO... 48 0.34 1
(AC178250) Strongylocentrotus purpuratus clone R3-3086L3, WO... 48 0.34 1
(AC168002) Bos taurus clone CH240-207L2, WORKING DRAFT SEQUE... 48 0.34 1
(DU192801) 1098553226233 CHORI-243 Ovis aries genomic clone ... 48 0.34 1
(BZ847757) CH240_250G6.TJ CHORI-240 Bos taurus genomic clone... 48 0.34 1
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041... 38 0.35 4
(CN767564) Tp_1799 Tyrophagus putrescentiae cDNA library Tyr... 38 0.37 2
(DW160468) CLVY12543.b1_M16.ab1 CLV(XYZ) lettuce virosa Lact... 36 0.41 2
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 36 0.42 6
(AC153847) Mus musculus 10 BAC RP23-286J11 (Roswell Park Can... 42 0.44 4
(FE763777) CCAG1683.b3 CCAG Petrolisthes cinctipes heart, gi... 36 0.45 2
(AY387646) Dictyostelium discoideum Phg1B (phg1b) gene, comp... 36 0.45 3
(AC172596) Bos taurus clone CH240-260O18, WORKING DRAFT SEQU... 38 0.46 4
(AC224069) Bos taurus clone CH240-450N8, WORKING DRAFT SEQUE... 46 0.52 5
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 36 0.52 6
(AL034558) Plasmodium falciparum MAL3P2. 34 0.58 5
(AC098338) Rattus norvegicus clone CH230-2A17, WORKING DRAFT... 38 0.61 3
(AC096943) Rattus norvegicus clone CH230-2C19, *** SEQUENCIN... 38 0.61 3
(AC182949) Bos taurus clone CH240-279N19, WORKING DRAFT SEQU... 42 0.66 4
(DW162464) CLVY14415.b1_M04.ab1 CLV(XYZ) lettuce virosa Lact... 36 0.67 2
(AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8... 34 0.68 7
(EU040277) Cancer pagurus clone Cpag-4 microsatellite sequence. 36 0.70 2
(AC178063) Strongylocentrotus purpuratus clone R3-3056P07, W... 32 0.73 2
(AC179561) Strongylocentrotus purpuratus clone R3-8D21, WORK... 32 0.73 2
(AC218734) Bos taurus clone CH240-296A14, WORKING DRAFT SEQU... 36 0.73 2
(AC177387) Strongylocentrotus purpuratus clone R3-53B10, WOR... 32 0.73 2
(AC149727) Bos taurus clone CH240-256P5, WORKING DRAFT SEQUE... 34 0.74 2
(DQ273271) Asparagus officinalis clone B4-L7-94, *** SEQUENC... 32 0.75 2
(AL844509) Plasmodium falciparum chromosome 13. 34 0.79 9
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 38 0.87 5
(AC182956) Bos taurus clone CH240-249P2, WORKING DRAFT SEQUE... 46 0.88 3
(CU618324) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.90 5
(AC218614) Bos taurus clone CH240-299E4, WORKING DRAFT SEQUE... 34 0.94 8
(DU430366) 1098415570906 CHORI-243 Ovis aries genomic clone ... 36 0.95 2
(AP006050) Oryza sativa Japonica Group genomic DNA, chromoso... 42 0.96 3
(CC478600) CH240_305E22.T7 CHORI-240 Bos taurus genomic clon... 34 0.96 2
(CR382137) Debaryomyces hansenii strain CBS767 chromosome E ... 40 0.97 12
(AC169097) Bos taurus clone CH240-226J5, WORKING DRAFT SEQUE... 40 1.0 3
(AC177178) Strongylocentrotus purpuratus clone R3-1035A21, W... 36 1.0 4
(AC215943) Populus trichocarpa clone POP055-B06, complete se... 36 1.1 5
(CN767207) Tp_1175 Tyrophagus putrescentiae cDNA library Tyr... 38 1.1 2
(AC173633) Strongylocentrotus purpuratus clone R3-1016C23, W... 40 1.1 4
(AC220285) Bos taurus clone CH240-368K2, WORKING DRAFT SEQUE... 36 1.1 3
(AC093797) Homo sapiens BAC clone RP11-301L8 from 4, complet... 40 1.1 4
(AL954703) Zebrafish DNA sequence from clone CH211-51I10 in ... 40 1.1 8
(AL928885) Zebrafish DNA sequence from clone CH211-195G24 in... 36 1.1 5
(AC163367) Bos taurus clone CH240-129J1, WORKING DRAFT SEQUE... 36 1.2 3
(CU313324) Zebrafish DNA sequence from clone DKEY-103P9 in l... 42 1.2 4
(AL645855) Mouse DNA sequence from clone RP23-122N23 on chro... 42 1.3 5
(AC218969) Macaca mulatta BAC CH250-550C4 (Children's Hospi... 46 1.4 1
(AC097709) Homo sapiens BAC clone RP11-19B4 from 4, complete... 46 1.4 1
(AC151088) Bos taurus clone CH240-103E1, WORKING DRAFT SEQUE... 46 1.4 1
(AC130869) Rattus norvegicus clone CH230-138H13, WORKING DRA... 46 1.4 1
(CU855525) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.4 1
(AP001194) Homo sapiens genomic DNA, chromosome 11q14 clone:... 46 1.4 1
(AC224624) Bos taurus clone CH240-480B5, WORKING DRAFT SEQUE... 46 1.4 1
(AC223820) Bos taurus clone CH240-457E9, WORKING DRAFT SEQUE... 46 1.4 1
(AC222811) Bos taurus clone CH240-438A21, WORKING DRAFT SEQU... 46 1.4 1
(AC222129) Bos taurus clone CH240-370N15, WORKING DRAFT SEQU... 46 1.4 1
(AC221595) Bos taurus clone CH240-391C9, WORKING DRAFT SEQUE... 46 1.4 1
(AC221214) Bos taurus clone CH240-399M9, WORKING DRAFT SEQUE... 46 1.4 1
(AC220426) Bos taurus clone CH240-358P10, WORKING DRAFT SEQU... 46 1.4 1
(AC219701) Bos taurus clone CH240-325K13, WORKING DRAFT SEQU... 46 1.4 1
(AC218484) Bos taurus clone CH240-313P5, WORKING DRAFT SEQUE... 46 1.4 1
(AC188374) Macaca mulatta chromosome UNK clone CH250-9H12, W... 46 1.4 1
(AC178911) Strongylocentrotus purpuratus clone R3-3115A3, WO... 46 1.4 1
(AC173428) Bos taurus clone CH240-23E3, WORKING DRAFT SEQUEN... 46 1.4 1
(AC172347) Bos taurus clone CH240-164E16, WORKING DRAFT SEQU... 46 1.4 1
(AC169756) Bos taurus clone CH240-217J5, WORKING DRAFT SEQUE... 46 1.4 1
(AC169609) Bos taurus clone CH240-204D8, WORKING DRAFT SEQUE... 46 1.4 1
(AC164142) Bos taurus clone CH240-130K22, WORKING DRAFT SEQU... 46 1.4 1
(EK513317) 1095515488220 Global-Ocean-Sampling_GS-32-01-01-1... 46 1.4 1
(CW121936) 104_500_11110237_116_34665_059 Sorghum methylatio... 46 1.4 1
(CR799966) GR0AAA19BE04RM1 INRA BAC Bos taurus genomic clone... 46 1.4 1
(AG476890) Mus musculus molossinus DNA, clone:MSMg01-370A20.... 46 1.4 1
(CC522489) CH240_370N15.TARBAC13P2 CHORI-240 Bos taurus geno... 46 1.4 1
(CC494636) CH240_329H4.TARBAC13P2 CHORI-240 Bos taurus genom... 46 1.4 1
(B38045) HS-1046-B2-G11-MR.abi CIT Human Genomic Sperm Libra... 46 1.4 1
(AU268959) Dictyostelium discoideum vegetative cDNA clone:VS... 46 1.4 1
(CK966589) 4081856 BARC 9BOV Bos taurus cDNA clone 9BOV1_L09... 46 1.4 1
(CF308895) ABF--02-O04.g1 ABF3-overexpressing transgenic ric... 46 1.4 1
(CB677391) OSJNEe14E12.r OSJNEe Oryza sativa Japonica Group ... 46 1.4 1
(CB670303) OSJNEe03F02.f OSJNEe Oryza sativa Japonica Group ... 46 1.4 1
(BJ210261) Triticum aestivum cDNA clone:wh27b05, 5' end, sin... 46 1.4 1
(EV439370) agen0049_006d_b11_q1ca Goat early pregnancy (d4-8... 46 1.4 1
(AC224284) Bos taurus clone CH240-490E4, WORKING DRAFT SEQUE... 36 1.4 3
(AP002786) Homo sapiens genomic DNA, chromosome 18q21 clone:... 42 1.5 3
(AB263748) Ipomoea trifida DNA, self-incompatibility (S-) lo... 34 1.5 5
(AC213013) Populus trichocarpa clone POP018-B03, complete se... 40 1.5 4
(AC170537) Bos taurus clone CH240-242K13, WORKING DRAFT SEQU... 42 1.5 2
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 40 1.7 7
(AC005505) Plasmodium falciparum chromosome 12 clone PFYAC18... 32 1.7 7
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 32 1.9 12
(DX984904) CHORI103-2D6.TJ CHORI103 Schistosoma mansoni geno... 42 2.1 2
(AC176370) Strongylocentrotus purpuratus clone R3-3048I3, WO... 38 2.1 6
(AC162001) Bos taurus clone CH240-108L5, WORKING DRAFT SEQUE... 44 2.1 2
(AC168012) Bos taurus clone CH240-199P16, WORKING DRAFT SEQU... 42 2.1 4
(AC181260) Strongylocentrotus purpuratus clone R3-115K12, WO... 40 2.2 4
(AC226289) Tachyglossus aculeatus clone TA_Ba-429K21, WORKIN... 40 2.2 3
(AP010597) Lotus japonicus genomic DNA, chromosome 4, clone:... 40 2.4 4
(AC119010) Rattus norvegicus clone CH230-306N7, *** SEQUENCI... 32 2.5 2
(AC146500) Danio rerio clone CH211-130P22, complete sequence. 36 2.5 7
(AC107555) Rattus norvegicus clone CH230-89E4, *** SEQUENCIN... 32 2.6 2
(AC180107) Strongylocentrotus purpuratus clone R3-3003C12, W... 40 2.6 5
(AC114099) Rattus norvegicus clone CH230-66A14, *** SEQUENCI... 32 2.6 2
(AC125205) Mus musculus BAC clone RP23-238I2 from 14, comple... 34 2.6 2
(AC145526) Papio hamadryas clone RP41-231A14, WORKING DRAFT ... 34 2.7 2
(AC147946) Macropus eugenii clone ME_KBa-515M4, WORKING DRAF... 32 2.7 2
(AC168730) Strongylocentrotus purpuratus clone R3-3010K13, W... 32 2.7 2
(AC177222) Strongylocentrotus purpuratus clone R3-40I7, WORK... 32 2.7 2
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 38 2.8 4
(AC201537) Strongylocentrotus purpuratus clone R3-3096F17, W... 40 2.9 3
(AM489206) Vitis vinifera contig VV78X048948.10, whole genom... 34 3.0 2
(AC091869) Homo sapiens chromosome 5 clone CTD-2381F15, comp... 44 3.0 4
(AP003312) Oryza sativa Japonica Group genomic DNA, chromoso... 38 3.0 3
(CW930713) EDCC406TF A. castellanii, 6-8 kb library from tot... 36 3.1 2
(AC140171) Homo sapiens chromosome 5 clone RP11-804N13, comp... 44 3.1 4
(CR792432) Zebrafish DNA sequence from clone DKEY-185I20 in ... 38 3.1 3
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 34 3.2 9
(AC104842) Homo sapiens BAC clone RP11-544D5 from 2, complet... 32 3.3 8
(AP009797) Lotus japonicus genomic DNA, clone: LjT12M13, TM0... 40 3.4 2
(BU910062) AGENCOURT_10487025 NICHD_XGC_Emb1 Xenopus laevis ... 32 3.5 2
(DE948014) Macropus eugenii DNA, BAC clone: MEB1-144P17_F, 5... 32 3.5 2
(DC215946) Plasmodium berghei strain ANKA cDNA clone:MG01837... 34 3.5 2
(DY885821) CeleSEQ1271 Cunninghamella elegans pBluescript (E... 34 3.5 2
(DY890142) CeleSEQ7815 Cunninghamella elegans pBluescript (E... 34 3.6 2
(DC225798) Plasmodium berghei strain ANKA cDNA clone:SG00374... 34 3.6 2
(DC226345) Plasmodium berghei strain ANKA cDNA clone:SG00551... 34 3.6 2
(DC215159) Plasmodium berghei strain ANKA cDNA clone:MG01736... 34 3.6 2
(CL618438) OR_BBa0011N11.f OR_BBa Oryza nivara genomic clone... 34 3.6 2
(DC229269) Plasmodium berghei strain ANKA cDNA clone:SG01499... 34 3.6 2
(AG958453) Drosophila sechellia DNA, clone: DSE1-015D22.F.fa... 34 3.6 2
(EX551710) AIAE-aab03b08.b1 Ancylostoma_caninum_EST_Female_p... 34 3.6 2
(DR026147) Osmo00179 F. cylindrus osmotic stress library Fra... 34 3.6 2
(AC172014) Bos taurus clone CH240-254D1, WORKING DRAFT SEQUE... 38 3.6 4
(DC231862) Plasmodium berghei strain ANKA cDNA clone:SG02315... 34 3.6 2
(FP236500) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 3.7 6
(CR382398) Plasmodium falciparum chromosome 6, complete sequ... 36 3.7 8
(EX555308) AIAE-aab30f08.b1 Ancylostoma_caninum_EST_Female_p... 34 3.7 2
(CR392003) Zebrafish DNA sequence from clone DKEY-242N9 in l... 36 3.9 7
(AC178759) Strongylocentrotus purpuratus clone R3-19C07, WOR... 44 3.9 3
(AC180042) Strongylocentrotus purpuratus clone R3-24A7, WORK... 34 4.0 5
(AC006305) Homo sapiens chromosome 18, clone RP11-456O19, co... 42 4.1 4
(AL035475) Plasmodium falciparum MAL4P2. 34 4.1 7
(AC163379) Bos taurus clone CH240-117G6, WORKING DRAFT SEQUE... 42 4.1 4
(FM992689) Candida dubliniensis CD36 chromosome 2, complete ... 36 4.1 8
(AM481097) Vitis vinifera, whole genome shotgun sequence, co... 38 4.1 4
(AC180932) Strongylocentrotus purpuratus clone R3-3061I15, W... 38 4.1 4
(CR926126) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 4.2 6
(AC139837) Homo sapiens chromosome 5 clone RP11-989D21, WORK... 44 4.2 6
(BQ577125) PfESToab14b03.y1 Plasmodium falciparum 3D7 asexua... 30 4.2 3
(CU041343) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 4.3 2
(AC141806) Apis mellifera clone CH224-61C12, WORKING DRAFT S... 34 4.4 5
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1... 32 4.4 9
(AC013191) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 36 4.4 3
(AC170273) Bos taurus clone CH240-261K14, WORKING DRAFT SEQU... 40 4.5 3
(AC232811) Solanum tuberosum chromosome 6 clone RHPOTKEY168D... 34 4.5 4
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s... 34 4.6 6
(AC222500) Bos taurus clone CH240-419P10, WORKING DRAFT SEQU... 44 4.7 3
(AE014846) Plasmodium falciparum 3D7 chromosome 12, section ... 36 4.7 9
(AC177492) Strongylocentrotus purpuratus clone R3-61N21, WOR... 38 4.8 2
(AC163579) Bos taurus clone CH240-132D11, WORKING DRAFT SEQU... 44 4.9 3
(CU570712) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 5.0 2
(AC182912) Bos taurus clone CH240-162C6, WORKING DRAFT SEQUE... 42 5.1 4
(AC180656) Strongylocentrotus purpuratus clone R3-3019N12, W... 42 5.2 3
(AC192716) Gallus gallus BAC clone CH261-38I3 from chromosom... 44 5.4 1
(BV430329) S237P6411FA4.T0 PortugueseWaterDog Canis familiar... 44 5.4 1
(AL773585) Mouse DNA sequence from clone RP23-16D18 on chrom... 44 5.4 1
(AL663060) Mouse DNA sequence from clone RP23-239H6 on chrom... 44 5.4 1
(AC139021) Mus musculus chromosome 1, clone RP23-448C15, com... 44 5.4 1
(AC138376) Mus musculus chromosome 7, clone RP23-53O7, compl... 44 5.4 1
(CT009521) M.truncatula DNA sequence from clone MTH2-81E13 o... 44 5.4 1
(AP009801) Lotus japonicus genomic DNA, chromosome 5, clone:... 44 5.4 1
(AF487263) Leptosphaeria maculans major facilitator superfam... 44 5.4 1
(AC187854) Populus trichocarpa clone Pop1-11B14, complete se... 44 5.4 1
(AB028617) Arabidopsis thaliana genomic DNA, chromosome 3, P... 44 5.4 1
(EA214299) Sequence 78614 from patent US 7214786. 44 5.4 1
(J01104) D.melanogaster heat shock locus 87C1: distal hsp70 ... 44 5.4 1
(EF125710) Metopus es strain CCAP 1653/2 hypothetical protei... 44 5.4 1
(AC140132) Homo sapiens chromosome 5 clone RP11-1308L4, comp... 44 5.4 1
(AC091873) Homo sapiens chromosome 5 clone CTD-2577N22, comp... 44 5.4 1
(AC162708) Bos taurus clone CH240-115L22, WORKING DRAFT SEQU... 44 5.4 1
(AC162561) Bos taurus clone CH240-120D10, WORKING DRAFT SEQU... 44 5.4 1
(AC158870) Bos taurus clone CH240-42I16, WORKING DRAFT SEQUE... 44 5.4 1
(AC158830) Bos taurus clone CH240-518J9, WORKING DRAFT SEQUE... 44 5.4 1
(AC158009) Bos taurus clone CH240-181D1, WORKING DRAFT SEQUE... 44 5.4 1
(AC153029) Bos taurus clone CH240-22I7, WORKING DRAFT SEQUEN... 44 5.4 1
(AC152991) Bos taurus clone CH240-22O17, WORKING DRAFT SEQUE... 44 5.4 1
(AC152707) Bos taurus clone CH240-5E7, WORKING DRAFT SEQUENC... 44 5.4 1
(AC152519) Bos taurus clone CH240-11D15, WORKING DRAFT SEQUE... 44 5.4 1
(AC151199) Bos taurus clone CH240-159P10, WORKING DRAFT SEQU... 44 5.4 1
(AC151082) Bos taurus clone CH240-346C10, WORKING DRAFT SEQU... 44 5.4 1
(AC149918) Strongylocentrotus purpuratus clone R3-14A13, WOR... 44 5.4 1
(AC149734) Bos taurus clone CH240-112C15, WORKING DRAFT SEQU... 44 5.4 1
(AC144589) Homo sapiens chromosome 5 clone RP11-799J19, WORK... 44 5.4 1
(AC141463) Homo sapiens chromosome 5 clone RP11-773N8, WORKI... 44 5.4 1
(AC140148) Homo sapiens chromosome 5 clone RP11-580P10, WORK... 44 5.4 1
(AC137314) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 44 5.4 1
(AC137015) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 44 5.4 1
(AC135705) Rattus norvegicus clone CH230-258K17, WORKING DRA... 44 5.4 1
(AC108441) Mus musculus clone RP23-381K7, WORKING DRAFT SEQU... 44 5.4 1
(CU929679) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 5.4 1
(CU499013) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 5.4 1
(CU138566) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 5.4 1
(AC231029) Bos taurus clone CH240-493G9, WORKING DRAFT SEQUE... 44 5.4 1
(AC230411) Bos taurus clone CH240-509H23, WORKING DRAFT SEQU... 44 5.4 1
(AC230215) Bos taurus clone CH240-518I20, WORKING DRAFT SEQU... 44 5.4 1
(AC230176) Bos taurus clone CH240-519A19, WORKING DRAFT SEQU... 44 5.4 1
(AC230174) Bos taurus clone CH240-518P21, WORKING DRAFT SEQU... 44 5.4 1
(AC224598) Bos taurus clone CH240-481B10, WORKING DRAFT SEQU... 44 5.4 1
(AC222784) Bos taurus clone CH240-439D3, WORKING DRAFT SEQUE... 44 5.4 1
(AC221548) Bos taurus clone CH240-407P12, WORKING DRAFT SEQU... 44 5.4 1
(AC221369) Bos taurus clone CH240-404O3, WORKING DRAFT SEQUE... 44 5.4 1
(AC221314) Bos taurus clone CH240-403F3, WORKING DRAFT SEQUE... 44 5.4 1
(AC219886) Bos taurus clone CH240-319G18, WORKING DRAFT SEQU... 44 5.4 1
(AC219504) Bos taurus clone CH240-331M20, WORKING DRAFT SEQU... 44 5.4 1
(AC218832) Bos taurus clone CH240-292L17, WORKING DRAFT SEQU... 44 5.4 1
(AC218180) Bos taurus clone CH240-268D10, WORKING DRAFT SEQU... 44 5.4 1
(AC185683) Bos taurus clone RP42-124J1, WORKING DRAFT SEQUENCE. 44 5.4 1
(AC183149) Bos taurus clone CH240-102G15, WORKING DRAFT SEQU... 44 5.4 1
(AC182121) Bos taurus clone CH240-492O22, WORKING DRAFT SEQU... 44 5.4 1
(AC180918) Strongylocentrotus purpuratus clone R3-3063E24, W... 44 5.4 1
(AC180771) Strongylocentrotus purpuratus clone R3-3073N16, W... 44 5.4 1
(AC180355) Strongylocentrotus purpuratus clone R3-3118G8, WO... 44 5.4 1
(AC179266) Strongylocentrotus purpuratus clone R3-42P23, WOR... 44 5.4 1
(AC175175) Bos taurus clone CH240-191A21, WORKING DRAFT SEQU... 44 5.4 1
(AC174211) Bos taurus clone CH240-93C7, WORKING DRAFT SEQUEN... 44 5.4 1
(AC173617) Bos taurus clone CH240-83D20, WORKING DRAFT SEQUE... 44 5.4 1
(AC168107) Bos taurus clone CH240-204A1, WORKING DRAFT SEQUE... 44 5.4 1
(AC166280) Bos taurus clone CH240-174A13, WORKING DRAFT SEQU... 44 5.4 1
(AC166139) Bos taurus clone CH240-13B20, *** SEQUENCING IN P... 44 5.4 1
(AC165004) Bos taurus clone CH240-162B10, WORKING DRAFT SEQU... 44 5.4 1
(AC164732) Bos taurus clone CH240-153L15, *** SEQUENCING IN ... 44 5.4 1
(AC164359) Bos taurus clone CH240-120E3, WORKING DRAFT SEQUE... 44 5.4 1
(AC164189) Bos taurus clone CH240-151D2, *** SEQUENCING IN P... 44 5.4 1
(FI299605) AdH1145-CPY2-P7TF AdH1 Arachis duranensis genomic... 44 5.4 1
(EK241195) 1095460226020 Global-Ocean-Sampling_GS-31-01-01-1... 44 5.4 1
(AM656591) Entamoeba moshkovskii FIC GSS, clone mosh043b08.p1k. 44 5.4 1
(ED281549) AUAC-aak17f09.g1 Ascaris suum whole genome shotgu... 44 5.4 1
(ED023934) SBA019_N14.r Sugar beet BAC library USH20 (Code S... 44 5.4 1
(DU509923) 1098609660054 CHORI-243 Ovis aries genomic clone ... 44 5.4 1
(AL126317) Fugu rubripes GSS sequence, clone 081J03aF8. 44 5.4 1
(CZ288775) cp60b07.r Candida parapsilosis Random Genomic Lib... 44 5.4 1
(CW840811) ET10553.Ds3.07.24.2002.jw49.479 Arabidopsis thali... 44 5.4 1
(CW403486) fsbb001f095d18k0 Sorghum methylation filtered lib... 44 5.4 1
(CE703008) tigr-gss-dog-17000368998048 Dog Library Canis lup... 44 5.4 1
(EH409102) RTHAIR1_33_E10.g1_A002 Sorghum bicolor BTx623 Roo... 44 5.4 1
(EH297668) UAHYP_05B_F_F05 UaHyphae_ARS Uromyces appendicula... 44 5.4 1
(DW126674) CLSX3221.b1_J13.ab1 CLS(XYZ) lettuce sativa Lactu... 44 5.4 1
(DT769578) EST1203428 Aquilegia cDNA library Aquilegia formo... 44 5.4 1
(DT769577) EST1203427 Aquilegia cDNA library Aquilegia formo... 44 5.4 1
(DT748346) EST1182195 Aquilegia cDNA library Aquilegia formo... 44 5.4 1
(DT748345) EST1182194 Aquilegia cDNA library Aquilegia formo... 44 5.4 1
(DR918262) EST1109801 Aquilegia cDNA library Aquilegia formo... 44 5.4 1
(DR025903) Osmo00527 F. cylindrus osmotic stress library Fra... 44 5.4 1
(DN813695) ACAC-aab57k17.g1 Hydra EST UCI 7 Hydra magnipapil... 44 5.4 1
(CN130386) RHOH1_41_D11.b1_A002 Acid- and alkaline-treated r... 44 5.4 1
(CF772657) DSBF1_37_G08.g1_A010 Drought-stressed before flow... 44 5.4 1
(CF485712) POL1_33_D09.b1_A002 Pollen Sorghum bicolor cDNA c... 44 5.4 1
(CA486196) WHE4328_E04_J08ZS Wheat meiotic anther cDNA libra... 44 5.4 1
(BG411894) OV2_39_D11.g1_A002 Ovary 2 (OV2) Sorghum bicolor ... 44 5.4 1
(BE918383) OV1_2_H10.g1_A002 Ovary 1 (OV1) Sorghum bicolor c... 44 5.4 1
(BE595030) PI1_48_H01.g1_A002 Pathogen induced 1 (PI1) Sorgh... 44 5.4 1
(BE595019) PI1_48_G01.g1_A002 Pathogen induced 1 (PI1) Sorgh... 44 5.4 1
(BE362318) DG1_85_C04.g1_A002 Dark Grown 1 (DG1) Sorghum bic... 44 5.4 1
(AW923774) DG1_59_D11.g1_A002 Dark Grown 1 (DG1) Sorghum bic... 44 5.4 1
(FE382042) CBNS951.fwd CBNS_Daphnia_pulex_Chosen_One_Library... 44 5.4 1
(FE382041) CBNS951.rev CBNS_Daphnia_pulex_Chosen_One_Library... 44 5.4 1
(AW747241) WS1_66_G02.g1_A002 Water-stressed 1 (WS1) Sorghum... 44 5.4 1
(AW679977) WS1_34_C10.g1_A002 Water-stressed 1 (WS1) Sorghum... 44 5.4 1
(AW679701) WS1_30_C09.g1_A002 Water-stressed 1 (WS1) Sorghum... 44 5.4 1
(EY327330) CAWY12551.rev CAWY Helobdella robusta Subtracted ... 44 5.4 1
(FP102113) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 5.5 2
(AE014850) Plasmodium falciparum 3D7 chromosome 12, section ... 32 5.5 7
(AY170918) Dictyostelium discoideum pats1 gene, partial cds. 36 5.7 2
(AC094273) Rattus norvegicus clone CH230-3G15, *** SEQUENCIN... 36 5.7 5
(AE014841) Plasmodium falciparum 3D7 chromosome 11 section 6... 34 5.7 7
(AC008317) Drosophila melanogaster clone BACR08N17, complete... 38 5.8 2
(AC119090) Rattus norvegicus clone CH230-184E8, *** SEQUENCI... 42 5.8 3
(BX649426) Zebrafish DNA sequence from clone DKEYP-82D11 in ... 38 6.0 4
(FE754893) CAYF4005.g3 CAYF Petrolisthes cinctipes heart, wh... 40 6.0 2
(FE754892) CAYF4005.b3 CAYF Petrolisthes cinctipes heart, wh... 40 6.0 2
(AC194461) Zea mays chromosome 4 clone CH201-133D23; ZMMBBc0... 42 6.0 2
(AC225877) Tachyglossus aculeatus clone TA_Ba-170G11, WORKIN... 40 6.0 2
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI... 32 6.1 7
(AC114917) Mus musculus chromosome 8 clone RP23-84K6, comple... 42 6.1 2
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 36 6.1 6
(AC172815) Bos taurus clone CH240-214K14, WORKING DRAFT SEQU... 40 6.3 3
(AC123747) Mus musculus chromosome 3, clone RP24-123I12, com... 40 6.3 2
(AC163587) Bos taurus clone CH240-130G18, WORKING DRAFT SEQU... 40 6.4 3
(CE293661) tigr-gss-dog-17000333882848 Dog Library Canis lup... 38 6.5 2
(CO216067) WS0043.B21_N04 SS-R-A-5 Picea sitchensis cDNA clo... 40 6.6 2
(AC094361) Rattus norvegicus clone CH230-3C21, WORKING DRAFT... 40 6.7 3
(AC166398) Bos taurus clone CH240-68F8, WORKING DRAFT SEQUEN... 40 6.7 2
(AW186917) BNLGHi7188 Six-day Cotton fiber Gossypium hirsutu... 40 6.9 2
(AC214101) Populus trichocarpa clone POP114-A12, complete se... 36 6.9 5
(AB025629) Arabidopsis thaliana genomic DNA, chromosome 3, P... 38 6.9 5
(AC153536) Mus musculus 10 BAC RP23-402F24 (Roswell Park Can... 42 6.9 2
(AW187574) BNLGHi7792 Six-day Cotton fiber Gossypium hirsutu... 40 6.9 2
(DY893941) CeleSEQ13408 Cunninghamella elegans pBluescript (... 40 7.0 2
(AC110261) Mus musculus chromosome 1, clone RP23-289I3, comp... 40 7.0 2
(FE804983) CCAG26001.g1 CCAG Petrolisthes cinctipes heart, g... 40 7.2 2
(AC158637) Mus musculus 10 BAC RP24-79K22 (Roswell Park Canc... 42 7.3 2
(EX851079) CBNC8828.fwd CBNC Phycomyces blakesleeanus NRRL15... 34 7.3 2
(AC106380) Rattus norvegicus clone CH230-117B12, *** SEQUENC... 38 7.4 3
(AC151999) Mus musculus BAC clone RP23-98D11 from chromosome... 42 7.5 2
(EX846884) CBNC6621.rev CBNC Phycomyces blakesleeanus NRRL15... 34 7.5 2
(AC174296) Medicago truncatula clone mth2-72l21, complete se... 36 7.5 5
(EX850147) CBNC8315.rev CBNC Phycomyces blakesleeanus NRRL15... 34 7.8 2
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ... 36 7.8 8
(AC012444) Homo sapiens BAC clone RP11-41C17 from 2, complet... 32 7.9 5
(FE749041) CAYC5320.b1 CAYC Petrolisthes cinctipes heart, ne... 40 8.0 2
(EX829340) CBNB1745.rev CBNB Phycomyces blakesleeanus NRRL15... 34 8.0 2
(FE749042) CAYC5320.g1 CAYC Petrolisthes cinctipes heart, ne... 40 8.0 2
(AC230389) Bos taurus clone CH240-510L3, WORKING DRAFT SEQUE... 40 8.1 4
(AC181556) Strongylocentrotus purpuratus clone R3-1109K24, W... 34 8.1 5
(EX850148) CBNC8315.fwd CBNC Phycomyces blakesleeanus NRRL15... 34 8.2 2
(AC158626) Mus musculus 6 BAC RP23-4F16 (Roswell Park Cancer... 40 8.3 4
(AC178277) Strongylocentrotus purpuratus clone R3-3093E13, W... 36 8.3 6
(AC087228) Mus musculus chromosome 16 clone RP23-125D15, WOR... 42 8.5 2
(ER288947) 1092343588958 Global-Ocean-Sampling_GS-34-01-01-1... 40 8.7 2
(CU013530) M.truncatula DNA sequence from clone MTH2-115K7 o... 40 8.9 3
(AC174224) Strongylocentrotus purpuratus clone R3-53C20, WOR... 40 8.9 3
(DW059322) CLLY11922.b1_C05.ab1 CLL(XYZ) lettuce saligna Lac... 34 9.0 2
(AC126295) Rattus norvegicus clone CH230-218E2, *** SEQUENCI... 32 9.0 2
(DW059582) CLLY12164.b1_G18.ab1 CLL(XYZ) lettuce saligna Lac... 34 9.3 2
(AC125748) Rattus norvegicus clone CH230-11K12, *** SEQUENCI... 32 9.3 2
(AC129632) Rattus norvegicus clone CH230-355I23, *** SEQUENC... 32 9.4 2
(AC132060) Rattus norvegicus clone CH230-96N13, *** SEQUENCI... 32 9.4 2
(AC097133) Rattus norvegicus clone CH230-60M20, *** SEQUENCI... 32 9.5 2
(AC106294) Rattus norvegicus clone CH230-76O10, WORKING DRAF... 32 9.5 2
(AC180029) Strongylocentrotus purpuratus clone R3-23N1, WORK... 32 9.5 2
(AC111366) Rattus norvegicus clone CH230-84H11, WORKING DRAF... 42 9.5 4
(AC114393) Rattus norvegicus clone CH230-122P20, *** SEQUENC... 32 9.5 2
(AC106163) Rattus norvegicus clone CH230-56H9, WORKING DRAFT... 32 9.5 2
(AC137256) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 32 9.5 2
(AC100887) Mus musculus clone RP23-67N3, LOW-PASS SEQUENCE S... 34 9.5 3
(AC093403) Mus musculus chromosome 7 clone RP23-91P23, WORKI... 32 9.5 2
(AC184816) Canis familiaris chromosome 14, clone XX-46G21, c... 30 9.5 2
(AC128455) Rattus norvegicus clone CH230-86M16, *** SEQUENCI... 32 9.5 2
(AC187022) Canis Familiaris chromosome 14, clone XX-314I11, ... 30 9.6 2
(AC114916) Mus musculus BAC clone RP23-68E10 from 15, comple... 32 9.6 2
(AC129627) Rattus norvegicus clone CH230-421M15, WORKING DRA... 32 9.6 2
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7... 36 9.6 4
(AC179100) Strongylocentrotus purpuratus clone R3-4011C21, W... 42 9.6 4
(AC177781) Strongylocentrotus purpuratus clone R3-1002J1, WO... 32 9.7 2
(AC112862) Rattus norvegicus clone CH230-303J18, *** SEQUENC... 38 9.7 4
(AC184471) Strongylocentrotus purpuratus clone R3-3089C15, W... 32 9.7 2
(AC137910) Canis lupus familiaris clone RP81-221F11, WORKING... 30 9.7 2
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 32 9.8 2
(AC184511) Strongylocentrotus purpuratus clone R3-3121C2, WO... 32 9.8 2
(AC159435) Trypanosoma brucei chromosome 8 clone RPCI93-29H2... 32 9.8 2
(AC184532) Strongylocentrotus purpuratus clone R3-3110G10, W... 32 9.8 2
(AC179811) Strongylocentrotus purpuratus clone R3-1013K2, WO... 32 9.8 2
(AC094521) Rattus norvegicus clone CH230-4L3, *** SEQUENCING... 38 9.8 2
(AC210652) Populus trichocarpa clone POP053-J11, complete se... 30 9.8 2
(AL353623) Human DNA sequence from clone RP11-376H15 on chro... 32 9.9 2
(AC180265) Strongylocentrotus purpuratus clone R3-3123H21, W... 32 9.9 2
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ... 32 9.9 12
(EJ608489) 1092962026085 Global-Ocean-Sampling_GS-29-01-01-1... 30 9.9 3
(AR552754) Sequence 7885 from patent US 6747137. 32 9.9 2

>(AC116956) Dictyostelium discoideum chromosome 2 map 1418423-1684967
strain AX4, complete sequence.
Length = 266544

Score = 1057 bits (533), Expect = 0.0
Identities = 533/533 (100%)
Strand = Plus / Minus


Query: 1 acatgtgacattactattggtaaatgtcaatgtttaaaaaatacatggtcaggttcagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86193 acatgtgacattactattggtaaatgtcaatgtttaaaaaatacatggtcaggttcagat 86134


Query: 61 tgttcaattccatatcaagttattagatcggttaatgaatcaacaacagcaggtggtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86133 tgttcaattccatatcaagttattagatcggttaatgaatcaacaacagcaggtggtgaa 86074


Query: 121 gcaacttttgaaggtgtttttggagatgttcatcaaggtattaaaatgcaaattggtggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86073 gcaacttttgaaggtgtttttggagatgttcatcaaggtattaaaatgcaaattggtggt 86014


Query: 181 attgattgtccaataatatttaattcatcaactattattaaatgtatggcaccagaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86013 attgattgtccaataatatttaattcatcaactattattaaatgtatggcaccagaaggt 85954


Query: 241 aacggaattaaaaaagtaacattattccaaaatgatatttattatacctatgataaatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85953 aacggaattaaaaaagtaacattattccaaaatgatatttattatacctatgataaatat 85894


Query: 301 aaatataaagcaattgaattgtcatgtccatcaaattgtttaggtaatggtatttgtaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85893 aaatataaagcaattgaattgtcatgtccatcaaattgtttaggtaatggtatttgtaat 85834


Query: 361 acatcaactggagaatgtaaatgtaattcaggttatggatcatacgattgttctccaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85833 acatcaactggagaatgtaaatgtaattcaggttatggatcatacgattgttctccaata 85774


Query: 421 atcaataatggtggtggtggtggtttaggtgaaacccccaatagtaatagtaatagtggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85773 atcaataatggtggtggtggtggtttaggtgaaacccccaatagtaatagtaatagtggt 85714


Query: 481 gaactagttatcccaccaaaatcaaatactacattaaatgaagaaacaggtgg 533
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85713 gaactagttatcccaccaaaatcaaatactacattaaatgaagaaacaggtgg 85661

Score = 46.1 bits (23), Expect(6) = 6e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 422 tcaataatggtggtggtggtggt 444
|||||||||||||||||||||||
Sbjct: 135106 tcaataatggtggtggtggtggt 135128

Score = 34.2 bits (17), Expect(6) = 6e-04
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 332 caaattgtttaggtaat 348
|||||||||||||||||
Sbjct: 110443 caaattgtttaggtaat 110459

Score = 32.2 bits (16), Expect(6) = 6e-04
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 293 ataaatataaatataa 308
||||||||||||||||
Sbjct: 15137 ataaatataaatataa 15152

Score = 32.2 bits (16), Expect(6) = 6e-04
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 459 caatagtaatagtaat 474
||||||||||||||||
Sbjct: 145315 caatagtaatagtaat 145330

Score = 26.3 bits (13), Expect(6) = 6e-04
Identities = 13/13 (100%)
Strand = Plus / Plus


Query: 315 tgaattgtcatgt 327
|||||||||||||
Sbjct: 38993 tgaattgtcatgt 39005

Score = 26.3 bits (13), Expect(6) = 6e-04
Identities = 13/13 (100%)
Strand = Plus / Plus


Query: 497 caaaatcaaatac 509
|||||||||||||
Sbjct: 236196 caaaatcaaatac 236208

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 749,940,803
Number of extensions: 52181979
Number of successful extensions: 5725715
Number of sequences better than 10.0: 422
Length of query: 533
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 510
Effective length of database: 99,442,330,388
Effective search space: 50715588497880
Effective search space used: 50715588497880
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.27
Homology vs Protein
Query= Contig-U03323-1 (Contig-U03323-1Q) /CSM_Contig/Contig-U03323-1Q.Seq.d
(533 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC116956_34(AC116956|pid:none) Dictyostelium discoideum chromoso... 333 1e-90
AC116982_41(AC116982|pid:none) Dictyostelium discoideum chromoso... 150 3e-35
AC116967_7(AC116967|pid:none) Dictyostelium discoideum chromosom... 148 1e-34
AC116967_8(AC116967|pid:none) Dictyostelium discoideum chromosom... 145 5e-34
AC116960_61(AC116960|pid:none) Dictyostelium discoideum chromoso... 144 1e-33
AC116920_24(AC116920|pid:none) Dictyostelium discoideum chromoso... 118 8e-26
AC116920_20(AC116920|pid:none) Dictyostelium discoideum chromoso... 118 1e-25
AC116920_25(AC116920|pid:none) Dictyostelium discoideum chromoso... 117 2e-25
AC117081_39(AC117081|pid:none) Dictyostelium discoideum chromoso... 109 5e-23
AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromoso... 103 4e-21
AC117081_43(AC117081|pid:none) Dictyostelium discoideum chromoso... 101 1e-20
AC117075_41(AC117075|pid:none) Dictyostelium discoideum chromoso... 92 8e-18
AC117075_64(AC117075|pid:none) Dictyostelium discoideum chromoso... 84 3e-15
AC117075_42(AC117075|pid:none) Dictyostelium discoideum chromoso... 65 1e-09
AC117080_18(AC117080|pid:none) Dictyostelium discoideum chromoso... 64 2e-09
AC116100_9(AC116100|pid:none) Dictyostelium discoideum chromosom... 63 5e-09
AC115598_37(AC115598|pid:none) Dictyostelium discoideum chromoso... 59 8e-08
AC116984_28(AC116984|pid:none) Dictyostelium discoideum chromoso... 51 2e-05
AM231718_1(AM231718|pid:none) Gallus gallus mRNA for tenascin-W ... 46 7e-04
AJ580920_1(AJ580920|pid:none) Mus musculus mRNA for tenascin-W p... 44 0.002
(Q80Z71) RecName: Full=Tenascin-N; Short=TN-N; Flags: P... 44 0.002
BC138335_1(BC138335|pid:none) Mus musculus tenascin N, mRNA (cDN... 44 0.002
AC117075_80(AC117075|pid:none) Dictyostelium discoideum chromoso... 44 0.003
BT070410_1(BT070410|pid:none) Picea sitchensis clone WS02727_L02... 44 0.003
EU596506_1(EU596506|pid:none) Rattus norvegicus tenascin C (Tnc)... 44 0.003
BT003436_1(BT003436|pid:none) Drosophila melanogaster SD04095 fu... 43 0.006
AC096673_18(AC096673|pid:none) Trypanosoma brucei chromosome 3 c... 42 0.008
(Q80YX1) RecName: Full=Tenascin; Short=TN; AltName: Ful... 41 0.017
BC144305_1(BC144305|pid:none) Homo sapiens cDNA clone MGC:177842... 41 0.017
AL732556_3(AL732556|pid:none) Mouse DNA sequence from clone RP24... 41 0.017
AL732556_1(AL732556|pid:none) Mouse DNA sequence from clone RP24... 41 0.017
AK127044_1(AK127044|pid:none) Homo sapiens cDNA FLJ45101 fis, cl... 41 0.017
AL049689_1(AL049689|pid:none) Novel human mRNA from chromosome 1... 41 0.017
AC103550_20(AC103550|pid:none) Oryza sativa chromosome 3 BAC OSJ... 41 0.017
(Q9UQP3) RecName: Full=Tenascin-N; Short=TN-N; Flags: P... 41 0.017
AM463622_2(AM463622|pid:none) Vitis vinifera contig VV78X244153.... 41 0.022
(Q8BYI9) RecName: Full=Tenascin-R; Short=TN-R; AltName:... 41 0.022
AF008227_1(AF008227|pid:none) Drosophila melanogaster odd Oz pro... 41 0.022
(Q05546) RecName: Full=Tenascin-R; Short=TN-R; AltName:... 41 0.022
BC132392_1(BC132392|pid:none) Mus musculus tenascin R, mRNA (cDN... 41 0.022
AE014296_3877(AE014296|pid:none) Drosophila melanogaster chromos... 41 0.022
A54148(A54148)odz protein - fruit fly (Drosophila sp.) 41 0.022
AE014296_3878(AE014296|pid:none) Drosophila melanogaster chromos... 41 0.022
BX004856_1(BX004856|pid:none) Zebrafish DNA sequence from clone ... 40 0.029
BC163556_1(BC163556|pid:none) Danio rerio tenascin C, mRNA (cDNA... 40 0.029
DQ096731_1(DQ096731|pid:none) Danio rerio tenascin-C (TNC) mRNA,... 40 0.029
AL110498_8(AL110498|pid:none) Caenorhabditis elegans YAC Y64G10A... 40 0.029
T27283(T27283)hypothetical protein Y64G10A.f - Caenorhabditis el... 40 0.029
(Q8K410) RecName: Full=Disintegrin and metalloproteinase domain-... 40 0.037
AK122377_1(AK122377|pid:none) Mus musculus mRNA for mKIAA0817 pr... 40 0.037
X08030_1(X08030|pid:none) Chicken mRNA fragment for tenascin (cT... 40 0.037
CR954216_234(CR954216|pid:none) Ostreococcus tauri strain OTTH05... 40 0.037
AK176188_1(AK176188|pid:none) Arabidopsis thaliana mRNA for majo... 40 0.037
BC060983_1(BC060983|pid:none) Mus musculus a disintegrin and met... 40 0.037
(Q9QYP0) RecName: Full=Multiple epidermal growth factor-like dom... 40 0.037
BC036727_1(BC036727|pid:none) Mus musculus multiple EGF-like-dom... 40 0.037
AB210038_1(AB210038|pid:none) Homo sapiens mRNA for TNC variant ... 40 0.049
(P24821) RecName: Full=Tenascin; Short=TN; AltName: Ful... 40 0.049
BC155681_1(BC155681|pid:none) Xenopus tropicalis hypothetical pr... 40 0.049
X56160_1(X56160|pid:none) Human mRNA for tenascin. 40 0.049
BC151843_1(BC151843|pid:none) Homo sapiens tenascin C, mRNA (cDN... 40 0.049
AK304015_1(AK304015|pid:none) Homo sapiens cDNA FLJ60213 complet... 40 0.049
AY596304_1(AY596304|pid:none) Chlamydomonas reinhardtii unknown ... 39 0.064
BC071284_1(BC071284|pid:none) Danio rerio tenascin W, mRNA (cDNA... 39 0.083
(Q06885) RecName: Full=Glycoprotein gp100; AltName: Full=P29F8; ... 39 0.11
BT011693_1(BT011693|pid:none) Arabidopsis thaliana At3g57630 gen... 39 0.11
AY280362_1(AY280362|pid:none) Homo sapiens EGF domain-containing... 38 0.14
BC129830_1(BC129830|pid:none) Homo sapiens tenascin R (restricti... 38 0.14
T00209(T00209)MEGF8 protein - human (fragment) 38 0.14
(Q9W7R3) RecName: Full=Teneurin-4; Short=Ten-4; AltName... 38 0.14
BC020198_1(BC020198|pid:none) Homo sapiens multiple EGF-like-dom... 38 0.14
X98085_1(X98085|pid:none) H.sapiens mRNA for tenascin-R. 38 0.14
AK295823_1(AK295823|pid:none) Homo sapiens cDNA FLJ60578 complet... 38 0.14
AB011541_1(AB011541|pid:none) Homo sapiens mRNA for MEGF8, parti... 38 0.14
(Q96KG7) RecName: Full=Multiple epidermal growth factor-like dom... 38 0.14
AL807754_1(AL807754|pid:none) Zebrafish DNA sequence from clone ... 38 0.14
CR749437_1(CR749437|pid:none) Homo sapiens mRNA; cDNA DKFZp781K1... 38 0.14
Z94055_1(Z94055|pid:none) Human DNA sequence from clone RP1-24M1... 38 0.14
AL773560_5(AL773560|pid:none) Pig DNA sequence from clone PigI-5... 38 0.19
(Q9UMG7) RecName: Full=Tenascin-X; Short=TN-X; AltName:... 38 0.19
AL049547_2(AL049547|pid:none) Human DNA sequence from clone RP1-... 38 0.19
AL645922_24(AL645922|pid:none) Human DNA sequence from clone XXb... 38 0.19
X71923_1(X71923|pid:none) H.sapiens XB gene for tenascin-X, exon... 38 0.19
AE014134_2530(AE014134|pid:none) Drosophila melanogaster chromos... 37 0.24
M24630_1(M24630|pid:none) Human hexabrachion mRNA, partial cds. 37 0.24
AC115605_7(AC115605|pid:none) Dictyostelium discoideum chromosom... 37 0.24
(P02468) RecName: Full=Laminin subunit gamma-1; AltName: Full=La... 37 0.32
BC165945_1(BC165945|pid:none) Synthetic construct Mus musculus c... 37 0.32
S47645(S47645) tMDC I protein - crab-eating macaque &X76637_1(X... 37 0.32
AX045123_1(AX045123|pid:none) Sequence 31 from Patent WO0066730.... 37 0.32
AY568568_1(AY568568|pid:none) Bos taurus reelin (RELN) mRNA, par... 37 0.32
AX045121_1(AX045121|pid:none) Sequence 29 from Patent WO0066730.... 37 0.32
S58870(S58870;S71844;I49297)reelin precursor - mouse 37 0.41
(Q6DFV8) RecName: Full=Von Willebrand factor D and EGF domain-co... 37 0.41
(Q60841) RecName: Full=Reelin; EC=3.4.21.-; AltName: Fu... 37 0.41
(Q9W7R4) RecName: Full=Teneurin-3; Short=Ten-3; AltName... 36 0.54
AJ506968_3(AJ506968|pid:none) Takifugu rubripes aif1, csnk2B, cy... 36 0.54
(P78509) RecName: Full=Reelin; EC=3.4.21.-; Flags: Prec... 36 0.54
AB470973_1(AB470973|pid:none) Ochromonas danica Ocm2 mRNA for tu... 36 0.54
AY650356_1(AY650356|pid:none) Macaca fascicularis reelin mRNA, p... 36 0.54
CP001323_444(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 36 0.54
AE014298_2399(AE014298|pid:none) Drosophila melanogaster chromos... 36 0.54
AE014298_2400(AE014298|pid:none) Drosophila melanogaster chromos... 36 0.54
AB062680_1(AB062680|pid:none) Rattus norvegicus Reln mRNA for re... 36 0.54
BX324137_1(BX324137|pid:none) Zebrafish DNA sequence from clone ... 36 0.54
AF090951_1(AF090951|pid:none) Lacerta viridis reelin (reln) mRNA... 36 0.70
AE014298_1834(AE014298|pid:none) Drosophila melanogaster chromos... 36 0.70
AM920437_1267(AM920437|pid:none) Penicillium chrysogenum Wiscons... 36 0.70
AK148084_1(AK148084|pid:none) Mus musculus B16 F10Y cells cDNA, ... 36 0.70
(O73791) RecName: Full=Tyrosine-protein kinase receptor Tie-2; ... 36 0.70
AB010266_2(AB010266|pid:none) Mus musculus Creb-rp, Tnx, Cyp21 g... 36 0.70
X68794_1(X68794|pid:none) Drosophila melanogaster mRNA for type ... 36 0.70
J03641_1(J03641|pid:none) Chicken cytotactin mRNA, partial cds, ... 36 0.70
AL158158_5(AL158158|pid:none) Human DNA sequence from clone RP11... 35 0.92
AK027870_1(AK027870|pid:none) Homo sapiens cDNA FLJ14964 fis, cl... 35 0.92
Z81110_2(Z81110|pid:none) Caenorhabditis elegans Cosmid T01D3, c... 35 0.92
AK067994_1(AK067994|pid:none) Oryza sativa Japonica Group cDNA c... 35 0.92
(Q8N2E2) RecName: Full=Von Willebrand factor D and EGF domain-co... 35 0.92
AJ437480_3(AJ437480|pid:none) Paramecium tetraurelia partial npe... 35 0.92
T20130(T20130)hypothetical protein C50H2.3b - Caenorhabditis ele... 35 0.92
T22945(T22945;T24295)hypothetical protein T01D3.1 - Caenorhabdit... 35 0.92
AB028498_1(AB028498|pid:none) Drosophila melanogaster mRNA for F... 35 0.92
AX367152_1(AX367152|pid:none) Sequence 1 from Patent WO0204599. 35 0.92
AB025413_1(AB025413|pid:none) Mus musculus mRNA for Ten-m4, comp... 35 1.2
(Q6N022) RecName: Full=Teneurin-4; Short=Ten-4; AltName... 35 1.2
AY286489_1(AY286489|pid:none) Danio rerio tenascin-R mRNA, compl... 35 1.2
BC168968_1(BC168968|pid:none) Rattus norvegicus N-acetylglucosam... 35 1.2
(Q3UHK6) RecName: Full=Teneurin-4; Short=Ten-4; AltName... 35 1.2
AY704216_1(AY704216|pid:none) Mus musculus reelin (Reln) mRNA, p... 35 1.2
AK147329_1(AK147329|pid:none) Mus musculus cDNA, RIKEN full-leng... 35 1.2
AL032657_4(AL032657|pid:none) Caenorhabditis elegans YAC Y47H9C,... 35 1.2
FM992695_525(FM992695|pid:none) Candida dubliniensis CD36 chromo... 35 1.6
AE017346_475(AE017346|pid:none) Cryptococcus neoformans var. neo... 35 1.6
U13646_1(U13646|pid:none) Caenorhabditis elegans cosmid ZK783, c... 35 1.6
AF374536_1(AF374536|pid:none) Thalassiosira guillardii isolate C... 35 1.6
AF374535_1(AF374535|pid:none) Thalassiosira guillardii isolate C... 35 1.6
BC146626_1(BC146626|pid:none) Xenopus laevis hypothetical protei... 35 1.6
BX537264_1(BX537264|pid:none) Zebrafish DNA sequence from clone ... 35 1.6
CP000595_187(CP000595|pid:none) Ostreococcus lucimarinus CCE9901... 35 1.6
BC146617_1(BC146617|pid:none) Xenopus tropicalis odz, odd Oz/ten... 35 1.6
T34513(T34513)hypothetical protein ZK783.1 - Caenorhabditis eleg... 35 1.6
EU716327_1(EU716327|pid:none) Danio rerio NtA agrin mRNA, comple... 34 2.0
AB001074_1(AB001074|pid:none) Caenorhabditis elegans mRNA for la... 34 2.0
EU716326_1(EU716326|pid:none) Danio rerio transmembrane agrin mR... 34 2.0
(Q9P273) RecName: Full=Teneurin-3; Short=Ten-3; AltName... 34 2.0
Z70286_5(Z70286|pid:none) Caenorhabditis elegans Cosmid K08C7, c... 34 2.0
AF427524_1(AF427524|pid:none) Danio rerio reelin (reln) mRNA, pa... 34 2.0
AF195418_1(AF195418|pid:none) Mus musculus ODZ3 (Odz3) mRNA, par... 34 2.0
AF373841_1(AF373841|pid:none) Gallus gallus laminin gamma 1 mRNA... 34 2.0
AE014134_1453(AE014134|pid:none) Drosophila melanogaster chromos... 34 2.0
(Q9WTS6) RecName: Full=Teneurin-3; Short=Ten-3; AltName... 34 2.0
(Q21313) RecName: Full=Laminin-like protein epi-1; Flags: Precur... 34 2.0
BX890618_1(BX890618|pid:none) Zebrafish DNA sequence from clone ... 34 2.0
BX088690_1(BX088690|pid:none) Zebrafish DNA sequence from clone ... 34 2.0
AX817295_1(AX817295|pid:none) Sequence 43 from Patent WO02081517. 34 2.7
BC146386_1(BC146386|pid:none) Synthetic construct Homo sapiens c... 34 2.7
(O75095) RecName: Full=Multiple epidermal growth factor-like dom... 34 2.7
AE014296_356(AE014296|pid:none) Drosophila melanogaster chromoso... 34 2.7
AX817297_1(AX817297|pid:none) Sequence 45 from Patent WO02081517. 34 2.7
BC122579_1(BC122579|pid:none) Bos taurus TEK tyrosine kinase, en... 34 2.7
CU928180_533(CU928180|pid:none) Kluyveromyces thermotolerans str... 34 2.7
AGCH(JH0591;A38857;B38857;I50692) agrin precursor - chicken &M9... 34 2.7
AB033063_1(AB033063|pid:none) Homo sapiens mRNA for KIAA1237 pro... 34 2.7
AJ536342_1(AJ536342|pid:none) Glomeris marginata partial mRNA fo... 34 2.7
AK170101_1(AK170101|pid:none) Mus musculus NOD-derived CD11c +ve... 34 2.7
AB470974_1(AB470974|pid:none) Ochromonas danica Ocm4 mRNA for tu... 34 2.7
AB011539_1(AB011539|pid:none) Homo sapiens mRNA for MEGF6 protei... 34 2.7
(Q06807) RecName: Full=Angiopoietin-1 receptor; EC=2.7.... 34 2.7
AY881030_1(AY881030|pid:none) Ovis aries tunica internal endothe... 34 2.7
AJ566620_1(AJ566620|pid:none) Paramecium tetraurelia macronuclea... 34 2.7
AK170219_1(AK170219|pid:none) Mus musculus NOD-derived CD11c +ve... 33 3.5
(Q9DER5) RecName: Full=Teneurin-2; Short=Ten-2; AltName... 33 3.5
AK122555_1(AK122555|pid:none) Mus musculus mRNA for mKIAA1781 pr... 33 3.5
AL627123_1(AL627123|pid:none) Mouse DNA sequence from clone RP23... 33 3.5
(Q80T91) RecName: Full=Multiple epidermal growth factor-like dom... 33 3.5
AB208796_1(AB208796|pid:none) Homo sapiens mRNA for TEK tyrosine... 33 3.5
M95811_1(M95811|pid:none) Drosophila melanogaster laminin B1 cha... 33 3.5
A49175(A49175;PH1570;S32113) Motch B protein - mouse (fragment) ... 33 3.5
(Q80V70) RecName: Full=Multiple epidermal growth factor-like dom... 33 3.5
CR858004_1(CR858004|pid:none) Pongo abelii mRNA; cDNA DKFZp469L1... 33 3.5
MMFFB1(A28783;S14462;B28783)laminin beta-1 chain precursor - fru... 33 3.5
BC172642_1(BC172642|pid:none) Synthetic construct Mus musculus c... 33 3.5
AK294887_1(AK294887|pid:none) Homo sapiens cDNA FLJ58359 complet... 33 3.5
AB086825_1(AB086825|pid:none) Homo sapiens Tie-2 mRNA for recept... 33 3.5
AX235004_1(AX235004|pid:none) Sequence 7 from Patent WO0162905. ... 33 3.5
CP000569_1520(CP000569|pid:none) Actinobacillus pleuropneumoniae... 33 3.5
CP000595_188(CP000595|pid:none) Ostreococcus lucimarinus CCE9901... 33 3.5
CP000687_1518(CP000687|pid:none) Actinobacillus pleuropneumoniae... 33 3.5
BC035514_1(BC035514|pid:none) Homo sapiens TEK tyrosine kinase, ... 33 3.5
AK134303_1(AK134303|pid:none) Mus musculus 13 days embryo male t... 33 3.5
AB384733_1(AB384733|pid:none) Synthetic construct DNA, clone: pF... 33 3.5
BT015222_1(BT015222|pid:none) Drosophila melanogaster RE35801 fu... 33 3.5
M19525_1(M19525|pid:none) D.melanogaster laminin B1 subunit mRNA... 33 3.5
AB072425_1(AB072425|pid:none) Oryzias latipes Reln mRNA for reel... 33 3.5
AK032158_1(AK032158|pid:none) Mus musculus adult male olfactory ... 33 3.5
CP000592_153(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 33 3.5
FJ222591_1(FJ222591|pid:none) Periplaneta americana Notch protei... 33 3.5
(Q8BJ48) RecName: Full=N-acetylglucosamine-1-phosphodiester alph... 33 3.5
(Q02763) RecName: Full=Angiopoietin-1 receptor; EC=2.7.... 33 3.5
CS237415_1(CS237415|pid:none) Sequence 130 from Patent WO2005113... 33 3.5
AX398352_1(AX398352|pid:none) Sequence 1 from Patent WO0220734. ... 33 3.5
CP000587_387(CP000587|pid:none) Ostreococcus lucimarinus CCE9901... 33 3.5
AK155450_1(AK155450|pid:none) Mus musculus NOD-derived CD11c +ve... 33 3.5
AK173032_1(AK173032|pid:none) Mus musculus mRNA for mKIAA0815 pr... 33 3.5
BC058571_1(BC058571|pid:none) Mus musculus multiple EGF-like-dom... 33 3.5
AF187073_1(AF187073|pid:none) Mus musculus N-acetylglucosamine-1... 33 3.5
AK051642_1(AK051642|pid:none) Mus musculus 12 days embryo spinal... 33 3.5
M64780_2(M64780|pid:none) Rat agrin mRNA, complete cds. 33 4.6
FN392321_495(FN392321|pid:none) Pichia pastoris GS115 chromosome... 33 4.6
AF074902_1(AF074902|pid:none) Caenorhabditis elegans laminin alp... 33 4.6
FN357711_14(FN357711|pid:none) Schistosoma mansoni genome sequen... 33 4.6
CP000500_483(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 33 4.6
AB384586_1(AB384586|pid:none) Synthetic construct DNA, clone: pF... 33 4.6
(P25304) RecName: Full=Agrin; Flags: Precursor; &AGRT(JH0399;A3... 33 4.6
EU123674_1(EU123674|pid:none) Huntleya wallisii voucher W. M. Wh... 33 4.6
AL035436_2(AL035436|pid:none) Drosophila melanogaster cosmid clo... 33 4.6
AX133531_1(AX133531|pid:none) Sequence 1 from Patent WO0131011. 33 4.6
F87908(F87908;E87908) protein T22A3.8 [imported] - Caenorhabditi... 33 4.6
M16152_1(M16152|pid:none) Drosophila melanogaster Notch growth f... 33 4.6
AF086610_1(AF086610|pid:none) Rattus norvegicus neurestin delta ... 33 4.6
(Q9ULI3) RecName: Full=Protein HEG homolog 1; Flags: Precursor; 33 4.6
AE014296_1167(AE014296|pid:none) Drosophila melanogaster chromos... 33 6.0
(O00468) RecName: Full=Agrin; Flags: Precursor; &AB191264_1(AB1... 33 6.0
AF016903_1(AF016903|pid:none) Homo sapiens agrin precursor mRNA,... 33 6.0
FN392321_962(FN392321|pid:none) Pichia pastoris GS115 chromosome... 33 6.0
AX250013_1(AX250013|pid:none) Sequence 12 from Patent WO0166747.... 33 6.0
AY060443_1(AY060443|pid:none) Drosophila melanogaster LD47460 fu... 33 6.0
L07288_1(L07288|pid:none) Drosophila melanogaster laminin A (Lam... 33 6.0
M96388_1(M96388|pid:none) Drosophila melanogaster laminin A chai... 33 6.0
EF535028_1(EF535028|pid:none) Sus scrofa ADAM3b mRNA, complete c... 33 6.0
AX045119_1(AX045119|pid:none) Sequence 27 from Patent WO0066730. 33 6.0
AB031297_1(AB031297|pid:none) Sarcophaga peregrina mRNA for 120-... 33 6.0
AX045117_1(AX045117|pid:none) Sequence 25 from Patent WO0066730. 33 6.0
AE014297_4237(AE014297|pid:none) Drosophila melanogaster chromos... 33 6.0
AL591496_16(AL591496|pid:none) Mouse DNA sequence from clone RP2... 33 6.0
AX133821_1(AX133821|pid:none) Sequence 7 from Patent WO0119856. 33 6.0
FJ945321_1(FJ945321|pid:none) Danio rerio stabilin 2 (stab2) mRN... 33 6.0
BC172353_1(BC172353|pid:none) Synthetic construct Homo sapiens c... 33 6.0
(A0JP86) RecName: Full=Laminin subunit gamma-1; Flags: Precursor... 33 6.0
AE014298_2536(AE014298|pid:none) Drosophila melanogaster chromos... 33 6.0
AB385108_1(AB385108|pid:none) Synthetic construct DNA, clone: pF... 33 6.0
AB038388_1(AB038388|pid:none) Rattus norvegicus Atrn mRNA for at... 33 6.0
AB201466_1(AB201466|pid:none) Holotrichia diomphalia EGF-like mR... 33 6.0
BT032866_1(BT032866|pid:none) Drosophila melanogaster SD07123 fu... 33 6.0
(Q00174) RecName: Full=Laminin subunit alpha; Short=Lam... 33 6.0
CR383662_1(CR383662|pid:none) Zebrafish DNA sequence from clone ... 33 6.0
BC084578_1(BC084578|pid:none) Homo sapiens agrin, mRNA (cDNA clo... 33 6.0
AY810920_1(AY810920|pid:none) Schistosoma japonicum SJCHGC06221 ... 33 6.0
AL591496_15(AL591496|pid:none) Mouse DNA sequence from clone RP2... 33 6.0
AY051999_1(AY051999|pid:none) Drosophila melanogaster LD46585 fu... 33 6.0
AK021586_1(AK021586|pid:none) Homo sapiens cDNA FLJ11524 fis, cl... 33 6.0
GQ222417_1(GQ222417|pid:none) Bos taurus breed Galloway attracti... 32 7.8
AL645912_4(AL645912|pid:none) Mouse DNA sequence from clone RP23... 32 7.8
AX671052_1(AX671052|pid:none) Sequence 7 from Patent WO03004529.... 32 7.8
AF531101_1(AF531101|pid:none) Bos taurus attractin mRNA, complet... 32 7.8
(Q9WU60) RecName: Full=Attractin; AltName: Full=Protein mahogany... 32 7.8
AL772277_3(AL772277|pid:none) Mouse DNA sequence from clone RP23... 32 7.8
AF218910_1(AF218910|pid:none) Homo sapiens attractin precursor (... 32 7.8
AM502249_272(AM502249|pid:none) Leishmania infantum chromosome 31. 32 7.8
(Q9WTS5) RecName: Full=Teneurin-2; Short=Ten-2; AltName... 32 7.8
AM502243_132(AM502243|pid:none) Leishmania infantum chromosome 25. 32 7.8
AF106861_1(AF106861|pid:none) Homo sapiens attractin-2 (ATRN) mR... 32 7.8
BC141361_1(BC141361|pid:none) Mus musculus odd Oz/ten-m homolog ... 32 7.8
(Q02858) RecName: Full=Angiopoietin-1 receptor; EC=2.7.... 32 7.8
AF449197_1(AF449197|pid:none) Plasmodium berghei cysteine repeat... 32 7.8
AL109805_2(AL109805|pid:none) Human DNA sequence from clone RP4-... 32 7.8
AY630342_1(AY630342|pid:none) Manduca sexta plasmatocyte-specifi... 32 7.8
AK074051_1(AK074051|pid:none) Homo sapiens mRNA for FLJ00122 pro... 32 7.8
AJ295695_1(AJ295695|pid:none) Homo sapiens mRNA for stabilin-2 (... 32 7.8
AB017167_1(AB017167|pid:none) Homo sapiens mRNA for Slit-1 prote... 32 7.8
BC061796_1(BC061796|pid:none) Rattus norvegicus a disintegrin an... 32 7.8
(Q9QYV0) RecName: Full=Disintegrin and metalloproteinase domain-... 32 7.8
AM920433_573(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 32 7.8
AP009180_93(AP009180|pid:none) Candidatus Carsonella ruddii PV D... 32 7.8
AM502249_273(AM502249|pid:none) Leishmania infantum chromosome 31. 32 7.8
AB062913_1(AB062913|pid:none) Mesocricetus auratus Atrn mRNA for... 32 7.8
EU675625_1(EU675625|pid:none) Hirudo medicinalis beta-integrin m... 32 7.8
(Q9NTQ3) RecName: Full=Attractin; AltName: Full=Mahogany homolog... 32 7.8
X67553_1(X67553|pid:none) M. musculus mRNA for tek. 32 7.8
AL133021_1(AL133021|pid:none) Homo sapiens mRNA; cDNA DKFZp434E0... 32 7.8
AJ245710_1(AJ245710|pid:none) Mus musculus partial mRNA for tene... 32 7.8
BC141054_1(BC141054|pid:none) Mus musculus attractin, mRNA (cDNA... 32 7.8
AL833771_1(AL833771|pid:none) Mouse DNA sequence from clone RP23... 32 7.8
AF218915_1(AF218915|pid:none) Homo sapiens attractin precursor (... 32 7.8
AF086609_1(AF086609|pid:none) Rattus norvegicus neurestin gamma ... 32 7.8
AB052958_1(AB052958|pid:none) Homo sapiens mRNA for FELE-2, comp... 32 7.8
(Q8I7T3) RecName: Full=Substrate-adhesion molecule; Flags: Precu... 32 7.8
(Q8WWQ8) RecName: Full=Stabilin-2; AltName: Full=Fasciclin, EGF-... 32 7.8
CR954207_381(CR954207|pid:none) Ostreococcus tauri strain OTTH05... 32 7.8

>AC116956_34(AC116956|pid:none) Dictyostelium discoideum chromosome 2
map 1418423-1684967 strain AX4, complete sequence.
Length = 1918

Score = 333 bits (855), Expect = 1e-90
Identities = 160/177 (90%), Positives = 160/177 (90%)
Frame = +1

Query: 1 TCDITIGKCQCLKNTWSGSDCSIPYQVIRSVNESTTAGGEATFEGVFGDVHQGIKMQIGG 180
TCDITIGKCQCLKNTWSGSDCSIPYQVIRSVNESTTAGGEATFEGVFGDVHQGIKMQIGG
Sbjct: 1476 TCDITIGKCQCLKNTWSGSDCSIPYQVIRSVNESTTAGGEATFEGVFGDVHQGIKMQIGG 1535

Query: 181 IDCPIIFNSSTIIKCMAPEGNGIKKVTLFQNDIXXXXXXXXXXAIELSCPSNCLGNGICN 360
IDCPIIFNSSTIIKCMAPEGNGIKKVTLFQNDI AIELSCPSNCLGNGICN
Sbjct: 1536 IDCPIIFNSSTIIKCMAPEGNGIKKVTLFQNDIYYTYDKYKYKAIELSCPSNCLGNGICN 1595

Query: 361 TSTGECKCNSGYGSYDCSPIINNXXXXXXXETPNSNSNSGELVIPPKSNTTLNEETG 531
TSTGECKCNSGYGSYDCSPIINN ETPNSNSNSGELVIPPKSNTTLNEETG
Sbjct: 1596 TSTGECKCNSGYGSYDCSPIINNGGGGGLGETPNSNSNSGELVIPPKSNTTLNEETG 1652

Score = 65.1 bits (157), Expect = 1e-09
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Frame = +1

Query: 1 TCDITIGKCQCLKNTWSGSDCSIPYQVIRSVNESTTAGGEATFEGVFGDVHQGIKMQIGG 180
TCD T+G C+C ++ G+DCS+P+ S+N + +G FG + Q G
Sbjct: 1334 TCDTTLGVCKC-DSSHQGNDCSLPFIKCPSINSNDCSG--------FGSCNN----QTGV 1380

Query: 181 IDCPI--IFNSSTIIKCMAPEGN--GIKKVTLFQNDIXXXXXXXXXXAIELSCPSNCLGN 348
C + + I+C P N G+ ++ + + CP+ C G
Sbjct: 1381 CSCNSGRALSDCSGIECSVPNCNNGGVCDTSIGKCQCDSSHQGNDCNIPLIQCPNLCSGF 1440

Query: 349 GICNTSTGECKCNSGYGSYDCSPIINNXXXXXXXETPNSNSN 474
G CN TG C CNSG + DCS I + PN NS+
Sbjct: 1441 GSCNNQTGICSCNSGRLNNDCSGI--------QCDVPNCNSH 1474

Score = 55.5 bits (132), Expect = 9e-07
Identities = 46/165 (27%), Positives = 62/165 (37%), Gaps = 8/165 (4%)
Frame = +1

Query: 4 CDITIGKCQCLKNTWSGSDCSIPYQVIRSVNESTTAG----GEATFEGVFGDVHQGIKMQ 171
C+ IG C CL + G DCS+P+ ++N + +G T HQ
Sbjct: 919 CNNQIGVCNCLAG-YQGLDCSLPFIKCPTINSNDCSGFGSCNNQTGICACDSSHQSTDCS 977

Query: 172 IGGIDCPIIFNSSTIIKCMAPEGNGIKKVTLFQNDIXXXXXXXXXXAIELSCPS----NC 339
+ I CP+ N + N I T + CPS +C
Sbjct: 978 LPFIQCPL--NGGKVCSSFGTCDNQIGICTC-----DGSHQGNDCSKTFVQCPSVNSNSC 1030

Query: 340 LGNGICNTSTGECKCNSGYGSYDCSPIINNXXXXXXXETPNSNSN 474
G G CN TG C CNSG + DCS I + PN NS+
Sbjct: 1031 SGFGSCNNETGACSCNSGRLNNDCSGI--------QCDVPNCNSH 1067

Score = 54.3 bits (129), Expect = 2e-06
Identities = 43/146 (29%), Positives = 60/146 (41%), Gaps = 8/146 (5%)
Frame = +1

Query: 1 TCDITIGKCQCLKNTWSGSDCSIPYQVIRSVNESTTAGGEATFEGVFGDVHQGIKMQIGG 180
TC+ TIGKCQC ++ GSDCS P+ S+N + +G FG + Q G
Sbjct: 1069 TCNNTIGKCQC-DSSHQGSDCSTPFIDCPSINLNDCSG--------FGSCNN----QTGT 1115

Query: 181 IDCPI--IFNSSTIIKCMAPE--GNGIKKVTLFQNDIXXXXXXXXXXAIELSCP----SN 336
C + T I+C P+ G+G + + + CP
Sbjct: 1116 CTCNSGKTLSDCTGIQCSVPDCNGHGTCDTNIGKCQCDSSHQGADCSLPLVQCPLYGGKV 1175

Query: 337 CLGNGICNTSTGECKCNSGYGSYDCS 414
C G CN TG C C+S + DCS
Sbjct: 1176 CGNFGTCNNQTGVCSCDSSHQGSDCS 1201

Score = 52.8 bits (125), Expect = 6e-06
Identities = 44/148 (29%), Positives = 60/148 (40%), Gaps = 8/148 (5%)
Frame = +1

Query: 1 TCDITIGKCQCLKNTWSGSDCSIPYQVIRSVNESTTAGGEATFEGVFGDVHQGIKMQIGG 180
TCD IG C C + G+DCS + SVN ++ +G FG + + G
Sbjct: 996 TCDNQIGICTC-DGSHQGNDCSKTFVQCPSVNSNSCSG--------FGSCNN----ETGA 1042

Query: 181 IDCPI--IFNSSTIIKCMAPEGN--GIKKVTLFQNDIXXXXXXXXXXAIELSCPS----N 336
C + N + I+C P N G T+ + + CPS +
Sbjct: 1043 CSCNSGRLNNDCSGIQCDVPNCNSHGTCNNTIGKCQCDSSHQGSDCSTPFIDCPSINLND 1102

Query: 337 CLGNGICNTSTGECKCNSGYGSYDCSPI 420
C G G CN TG C CNSG DC+ I
Sbjct: 1103 CSGFGSCNNQTGTCTCNSGKTLSDCTGI 1130

Score = 48.5 bits (114), Expect = 1e-04
Identities = 43/144 (29%), Positives = 54/144 (37%), Gaps = 2/144 (1%)
Frame = +1

Query: 4 CDITIGKCQCLKNTWSGSDCSIPY--QVIRSVNESTTAGGEATFEGVFGDVHQGIKMQIG 177
CD++ G C C ++ +SGSDCS + N + T G AT H G Q
Sbjct: 613 CDLSTGTCYC-ESGYSGSDCSFKNCGSSVPDCNGAGTCNG-ATGLCTCDSTHVGDYCQYS 670

Query: 178 GIDCPIIFNSSTIIKCMAPEGNGIKKVTLFQNDIXXXXXXXXXXAIELSCPSNCLGNGIC 357
CP S C N K T + C +NC GNG+C
Sbjct: 671 TSACPNNCGGSAYGTC-----NANKTCTC------NAGFAGVDCSKPTQCVNNCSGNGVC 719

Query: 358 NTSTGECKCNSGYGSYDCSPIINN 429
G C+C GYG CS I N
Sbjct: 720 --VNGFCQCFDGYGDSSCSAKILN 741

Score = 48.1 bits (113), Expect = 1e-04
Identities = 48/189 (25%), Positives = 64/189 (33%), Gaps = 52/189 (27%)
Frame = +1

Query: 4 CDITIGKCQCLKN--------------------------------------TWSGSDCSI 69
CD T GKCQC N + G+DCS+
Sbjct: 800 CDTTTGKCQCDPNFQGVDCSLPLVQCPLYGGKVCGGFGTCNNQTGVCSCDGSHQGADCSL 859

Query: 70 PYQVIRSVNESTTAGGEATFEGVFG-----DVHQGIKMQIGGIDCPIIFNSSTIIKCMAP 234
P+ + +N GG T G HQG + + CPI F + P
Sbjct: 860 PF-IQCPLNGGKVCGGFGTCNNQTGVCTCDGSHQGTSCSLPFVQCPISF--------LNP 910

Query: 235 EGNGIKKVTLFQNDIXXXXXXXXXXAIELSCP---------SNCLGNGICNTSTGECKCN 387
G G K+ N I ++ S P ++C G G CN TG C C+
Sbjct: 911 CG-GSKRGNC-NNQIGVCNCLAGYQGLDCSLPFIKCPTINSNDCSGFGSCNNQTGICACD 968

Query: 388 SGYGSYDCS 414
S + S DCS
Sbjct: 969 SSHQSTDCS 977

Score = 47.8 bits (112), Expect = 2e-04
Identities = 41/138 (29%), Positives = 54/138 (39%)
Frame = +1

Query: 1 TCDITIGKCQCLKNTWSGSDCSIPYQVIRSVNESTTAGGEATFEGVFGDVHQGIKMQIGG 180
TCD IGKCQC ++ G+DCS+P + + GG+ G FG + Q G
Sbjct: 1142 TCDTNIGKCQC-DSSHQGADCSLP------LVQCPLYGGKVC--GNFGTCNN----QTGV 1188

Query: 181 IDCPIIFNSSTIIKCMAPEGNGIKKVTLFQNDIXXXXXXXXXXAIELSCPSNCLGNGICN 360
C S C +P +K T+ ND C G CN
Sbjct: 1189 CSCDSSHQGSD---CSSPF---VKCPTVNSND--------------------CSDFGSCN 1222

Query: 361 TSTGECKCNSGYGSYDCS 414
TG C C+S + DCS
Sbjct: 1223 NQTGSCSCDSSHQGADCS 1240

Score = 47.8 bits (112), Expect = 2e-04
Identities = 47/171 (27%), Positives = 67/171 (39%), Gaps = 13/171 (7%)
Frame = +1

Query: 1 TCDITIGKCQCLKNTWSGSDCSIPYQVIRSVNESTTAG----------GEATFEGVFGDV 150
+C+ G C C ++ G+DCS+P+ + S G G T +G
Sbjct: 1220 SCNNQTGSCSC-DSSHQGADCSLPFIQCPIYSNSLCGGSSFGSCNNQTGVCTCDGS---- 1274

Query: 151 HQGIKMQIGGIDCPIIFNS--STIIKCMAPEGNGIKKVTLFQNDIXXXXXXXXXXAIELS 324
QG + I CP I + S C G + ND I+
Sbjct: 1275 QQGADCSLPLIQCPSINSKDCSGFGSCNNETGICSCNLGRLNNDCS---------GIQCG 1325

Query: 325 CPSNCLGNGICNTSTGECKCNSGYGSYDCS-PIINNXXXXXXXETPNSNSN 474
P NC G+G C+T+ G CKC+S + DCS P I + P+ NSN
Sbjct: 1326 SP-NCNGHGTCDTTLGVCKCDSSHQGNDCSLPFI---------KCPSINSN 1366

Score = 46.2 bits (108), Expect = 5e-04
Identities = 19/31 (61%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +1

Query: 325 CPSNCLGN-GICNTSTGECKCNSGYGSYDCS 414
CP++C GN GIC+ STG C C SGY DCS
Sbjct: 602 CPNDCSGNQGICDLSTGTCYCESGYSGSDCS 632

Score = 35.8 bits (81), Expect = 0.70
Identities = 42/149 (28%), Positives = 53/149 (35%), Gaps = 17/149 (11%)
Frame = +1

Query: 19 GKCQCLKNTWSGSDCSIPYQVIRSVNESTTAGGEATFEGVFG------------DVHQGI 162
G CQC + S CS + +N AGG A G +G D +QG
Sbjct: 722 GFCQCFDG-YGDSSCSA-----KILNCPVGAGG-APCNGFYGACNPATGVCTCRDGYQGS 774

Query: 163 KMQIGGIDCPIIFNSSTIIKCMAPEGNGIKKVT-LFQNDIXXXXXXXXXXAIELSCP--- 330
I CP+ NS I C + N T Q D ++ CP
Sbjct: 775 ACDDRLIQCPVAMNS---IVCNRLDINWCDTTTGKCQCDPNFQGVDCSLPLVQ--CPLYG 829

Query: 331 -SNCLGNGICNTSTGECKCNSGYGSYDCS 414
C G G CN TG C C+ + DCS
Sbjct: 830 GKVCGGFGTCNNQTGVCSCDGSHQGADCS 858

Lambda K H
0.314 0.133 0.415

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 750,367,134
Number of extensions: 13424442
Number of successful extensions: 31315
Number of sequences better than 10.0: 289
Number of HSP's gapped: 30877
Number of HSP's successfully gapped: 569
Length of query: 177
Length of database: 1,061,185,681
Length adjustment: 120
Effective length of query: 57
Effective length of database: 668,971,921
Effective search space: 38131399497
Effective search space used: 38131399497
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 30 (16.2 bits)

PSORT

psg: 0.67 gvh: 0.41 alm: 0.43 top: 0.53 tms: 0.00 mit: 0.24 mip: 0.06
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: cytoplasmic
24.0 %: nuclear
20.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: vesicles of secretory system

>> prediction for Contig-U03323-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 1