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Dicty_cDB
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U16482-1
Contig ID Contig-U16482-1
Contig update 2004. 6.11
Contig sequence 
>Contig-U16482-1 (Contig-U16482-1Q) /CSM_Contig/Contig-U16482-1Q.Seq.d
CTCAAAATCAATTAAAATTTTTTTAGTTTTGTTTTGTTGAATCCTTAATA
CATTCAGAATGCCTATCCACGAATTCCAAGTTGTTGGTCGTCACGTTCCA
ACTGAAAGAGATGCAAACCCAAAAATCTACAGAATGAGACTCTTTGCTCA
AACCTCAATCCACGCTAAGAGCCGTTTCTGGTATTTCTTATCAAAGATTG
TTAAGATGAAGAAATCCACTGGTGAAATCCTCAACGTCACTGAAATCTTT
GAAGATAAACCACAAAAAGTTAAGAACTTTGGTGTATTCATCAGATACAA
CTCTAGATCTGGTACCCACAACATCTACAAGGAATACAGAGATCTCACTC
GTTGTGGTGCTGTTTCTCAAATGTACGACGAAATGGCCTCACGTCACTCT
GCTCGTGAATCATCCATCCATATCATTGATATCAAGGAAATCGCCGCCTC
ATTAACCAGACGTGCCAACACTAAACAATTCCACGATTCAAAGATTAAAT
TCCCATTAACTCACAGAATTGCTAAATCAAAATCAACCTTTGTTGCCAAC
AGACCAAATACCTTCTTCTGTTAAATTTAGATTTTAGGTGCCATATATAC
TAATATACTAAATAAAAGGGATAGTTATTTAAAAAAAAAATATATTAAAA
AATAGGTTTATAGTTGTGCAATTAATTTTTTTAAATAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA
Gap no gap
Contig length 721
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 3780880
End point 3781566
Strand (PLUS/MINUS) PLUS
Number of clones 58
Number of EST 67
Link to clone list U16482
List of clone(s) 

est1=FC-IC1228E,1,466
est2=VSI561E,1,623
est3=VFB175Z,26,597
est4=VSF178E,34,613
est5=VFA733F,36,617
est6=VFA733Z,36,597
est7=VFB175F,36,526
est8=VFI259F,39,616
est9=VFI259Z,39,155
est10=VFN172F,39,644
est11=VFN224F,39,616
est12=VFE628F,41,369
est13=VSD363Z,43,622
est14=VSG696F,43,458
est15=VSI732Z,43,622
est16=VSD546Z,44,642
est17=SSE243E,45,639
est18=VSH380E,47,622
est19=FC-BA19E,51,652
est20=VSB154E,51,658
est21=VSH671E,51,646
est22=FC-AV24E,52,642
est23=SSG450E,52,643
est24=VSJ130Z,52,623
est25=VSJ130F,53,546
est26=VSD125E,54,563
est27=VSE821E,54,653
est28=VSD363F,55,643
est29=VSD546F,55,618
est30=VSH790E,55,643
est31=VSH857E,55,624
est32=VSD879Z,56,622
est33=VSE817E,56,644
est34=VSF209F,57,643
est35=VSJ139F,60,654
est36=VSB217E,64,655
est37=FC-BB23E,68,640
est38=FC-BH19E,68,641
est39=VSA748E,69,659
est40=VSD123F,69,643
est41=VSD123Z,69,607
est42=VSD422Z,69,243
est43=VSA139E,70,671
est44=FC-AQ21Z,74,660
est45=VSC496Z,83,636
est46=VSA221Z,123,656
est47=VSB745E,123,649
est48=VSA571Z,127,647
est49=VSB659Z,128,657
est50=VSB846Z,128,649
est51=SSA276E,194,627
est52=VSE711Z,194,721
est53=SLG232E,195,624
est54=VSJ110F,205,654
est55=VSJ110Z,205,623
est56=VSC178Z,216,666
est57=FC-AG12E,224,635
est58=VSJ444F,271,654
est59=VSJ444Z,271,643
est60=VSE644Z,276,647
est61=VSG501F,339,654
est62=VSB459Z,361,680
est63=FC-IC0956F,375,660
est64=FC-IC0956Z,375,661
est65=VFE628Z,395,525
est66=VSB733E,444,639
est67=VSE267E,529,666
Translated Amino Acid sequence 
sksikiflvlfc*ILNTFRMPIHEFQVVGRHVPTERDANPKIYRMRLFAQTSIHAKSRFW
YFLSKIVKMKKSTGEILNVTEIFEDKPQKVKNFGVFIRYNSRSGTHNIYKEYRDLTRCGA
VSQMYDEMASRHSARESSIHIIDIKEIAASLTRRANTKQFHDSKIKFPLTHRIAKSKSTF
VANRPNTFFC*i*ilgaiytnilnkrdsylkkkyikk*vyscainffk*kkkkkkkkkkk
Translated Amino Acid sequence (All Frames) 
Frame A:
lkin*nffsfvllnp*yiqnaypripscwssrsn*krckpknlqnetlcsnlnpr*epfl
vflikdc*deeihw*npqrh*nl*r*ttks*elwcihqiql*iwypqhlqgiqrshslwc
cfsnvrrngltslcs*iihpyh*yqgnrrlinqtcqh*tiprfkd*ipinsqnc*ikinl
ccqqtkyllllnldfrchiy*ytk*kg*lfkkkiy*kigl*lcn*ff*ikkkkkkkkkkk


Frame B:
sksikiflvlfc*ILNTFRMPIHEFQVVGRHVPTERDANPKIYRMRLFAQTSIHAKSRFW
YFLSKIVKMKKSTGEILNVTEIFEDKPQKVKNFGVFIRYNSRSGTHNIYKEYRDLTRCGA
VSQMYDEMASRHSARESSIHIIDIKEIAASLTRRANTKQFHDSKIKFPLTHRIAKSKSTF
VANRPNTFFC*i*ilgaiytnilnkrdsylkkkyikk*vyscainffk*kkkkkkkkkkk


Frame C:
qnqlkff*fcfveslihseclstnskllvvtfqlkemqtqkste*dsllkpqstlravsg
isyqrllr*rnplvksstslkslkinhkklrtlvyssdttldlvpttstrnteislvvvl
flkcttkwphvtllvnhpsislisrkspph*pdvptlnnstiqrlnsh*ltellnqnqpl
lptdqipssvkfrf*vpyiliy*ikgivi*kknilknrfivvqliflnkkkkkkkkkkk
own update 2004. 6.23
Homology vs CSM-cDNA 
Query= Contig-U16482-1 (Contig-U16482-1Q)
/CSM_Contig/Contig-U16482-1Q.Seq.d
         (721 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U16482-1 (Contig-U16482-1Q) /CSM_Contig/Conti...  1207  0.0
Contig-U10915-1 (Contig-U10915-1Q) /CSM_Contig/Conti...    38  0.018
Contig-U15577-1 (Contig-U15577-1Q) /CSM_Contig/Conti...    36  0.072
Contig-U15061-1 (Contig-U15061-1Q) /CSM_Contig/Conti...    34  0.29
Contig-U14921-1 (Contig-U14921-1Q) /CSM_Contig/Conti...    34  0.29
Contig-U16708-1 (Contig-U16708-1Q) /CSM_Contig/Conti...    32  1.1
Contig-U16185-1 (Contig-U16185-1Q) /CSM_Contig/Conti...    32  1.1
Contig-U13845-1 (Contig-U13845-1Q) /CSM_Contig/Conti...    32  1.1

>Contig-U16482-1 (Contig-U16482-1Q) /CSM_Contig/Contig-U16482-1Q.Seq.d
          Length = 721

 Score = 1207 bits (609), Expect = 0.0
 Identities = 623/630 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcaaaatcaattaaaannnnnnnagttttgttttgttgaatccttaatacattcagaat 60
           |||||||||||||||||       ||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctcaaaatcaattaaaatttttttagttttgttttgttgaatccttaatacattcagaat 60

                                                                       
Query: 61  gcctatccacgaattccaagttgttggtcgtcacgttccaactgaaagagatgcaaaccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcctatccacgaattccaagttgttggtcgtcacgttccaactgaaagagatgcaaaccc 120

                                                                       
Query: 121 aaaaatctacagaatgagactctttgctcaaacctcaatccacgctaagagccgtttctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaaatctacagaatgagactctttgctcaaacctcaatccacgctaagagccgtttctg 180

                                                                       
Query: 181 gtatttcttatcaaagattgttaagatgaagaaatccactggtgaaatcctcaacgtcac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtatttcttatcaaagattgttaagatgaagaaatccactggtgaaatcctcaacgtcac 240

                                                                       
Query: 241 tgaaatctttgaagataaaccacaaaaagttaagaactttggtgtattcatcagatacaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaaatctttgaagataaaccacaaaaagttaagaactttggtgtattcatcagatacaa 300

                                                                       
Query: 301 ctctagatctggtacccacaacatctacaaggaatacagagatctcactcgttgtggtgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctctagatctggtacccacaacatctacaaggaatacagagatctcactcgttgtggtgc 360

                                                                       
Query: 361 tgtttctcaaatgtacgacgaaatggcctcacgtcactctgctcgtgaatcatccatcca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtttctcaaatgtacgacgaaatggcctcacgtcactctgctcgtgaatcatccatcca 420

                                                                       
Query: 421 tatcattgatatcaaggaaatcgccgcctcattaaccagacgtgccaacactaaacaatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatcattgatatcaaggaaatcgccgcctcattaaccagacgtgccaacactaaacaatt 480

                                                                       
Query: 481 ccacgattcaaagattaaattcccattaactcacagaattgctaaatcaaaatcaacctt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccacgattcaaagattaaattcccattaactcacagaattgctaaatcaaaatcaacctt 540

                                                                       
Query: 541 tgttgccaacagaccaaataccttcttctgttaaatttagattttaggtgccatatatac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgttgccaacagaccaaataccttcttctgttaaatttagattttaggtgccatatatac 600

                                         
Query: 601 taatatactaaataaaagggatagttattt 630
           ||||||||||||||||||||||||||||||
Sbjct: 601 taatatactaaataaaagggatagttattt 630


>Contig-U10915-1 (Contig-U10915-1Q) /CSM_Contig/Contig-U10915-1Q.Seq.d
          Length = 1382

 Score = 38.2 bits (19), Expect = 0.018
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 487 ttcaaagattaaattccca 505
           |||||||||||||||||||
Sbjct: 552 ttcaaagattaaattccca 570


>Contig-U15577-1 (Contig-U15577-1Q) /CSM_Contig/Contig-U15577-1Q.Seq.d
          Length = 2343

 Score = 36.2 bits (18), Expect = 0.072
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 524  aaatcaaaatcaaccttt 541
            ||||||||||||||||||
Sbjct: 1184 aaatcaaaatcaaccttt 1201


 Score = 36.2 bits (18), Expect = 0.072
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 524 aaatcaaaatcaaccttt 541
           ||||||||||||||||||
Sbjct: 684 aaatcaaaatcaaccttt 701


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7393
Number of Sequences: 8402
Number of extensions: 7393
Number of successful extensions: 902
Number of sequences better than 10.0: 68
length of query: 721
length of database: 8,075,542
effective HSP length: 16
effective length of query: 705
effective length of database: 7,941,110
effective search space: 5598482550
effective search space used: 5598482550
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 4. 8
Homology vs DNA 
Query= Contig-U16482-1 (Contig-U16482-1Q) /CSM_Contig/Contig-U16482-1Q.Seq.d
         (721 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU268892) Dictyostelium discoideum vegetative cDNA clone:VS...  1126   0.0    2
(AU269156) Dictyostelium discoideum vegetative cDNA clone:VS...  1112   0.0    1
(BJ416900) Dictyostelium discoideum cDNA clone:ddv27o17, 5' ...  1112   0.0    2
(BJ413962) Dictyostelium discoideum cDNA clone:ddv17e16, 5' ...  1110   0.0    1
(BJ443454) Dictyostelium discoideum cDNA clone:ddv52p21, 3' ...  1102   0.0    1
(AU261854) Dictyostelium discoideum vegetative cDNA clone:VS...  1096   0.0    2
(AU284444) Dictyostelium discoideum gamete cDNA clone:FC-AV2...  1094   0.0    2
(AU267803) Dictyostelium discoideum vegetative cDNA clone:VS...  1090   0.0    1
(AU263405) Dictyostelium discoideum vegetative cDNA clone:VS...  1090   0.0    2
(AU263911) Dictyostelium discoideum vegetative cDNA clone:VS...  1088   0.0    1
(AU263401) Dictyostelium discoideum vegetative cDNA clone:VS...  1086   0.0    2
(C94135) Dictyostelium discoideum slug cDNA, clone SSG450.       1086   0.0    2
(AU267978) Dictyostelium discoideum vegetative cDNA clone:VS...  1082   0.0    1
(AU261898) Dictyostelium discoideum vegetative cDNA clone:VS...  1070   0.0    2
(AU284542) Dictyostelium discoideum gamete cDNA clone:FC-BB2...  1063   0.0    2
(AU261707) Dictyostelium discoideum vegetative cDNA clone:VS...  1061   0.0    2
(AU261305) Dictyostelium discoideum vegetative cDNA clone:VS...  1059   0.0    2
(BJ410895) Dictyostelium discoideum cDNA clone:ddv2b09, 5' e...   997   0.0    2
(BJ416763) Dictyostelium discoideum cDNA clone:ddv27o06, 5' ...   983   0.0    2
(AU267359) Dictyostelium discoideum vegetative cDNA clone:VS...  1003   0.0    2
(AU264833) Dictyostelium discoideum vegetative cDNA clone:VS...   924   0.0    3
(AU284384) Dictyostelium discoideum gamete cDNA clone:FC-AQ2...  1043   0.0    2
(AU263910) Dictyostelium discoideum vegetative cDNA clone:VS...   959   0.0    2
(AU264216) Dictyostelium discoideum vegetative cDNA clone:VS...  1063   0.0    2
(AU284512) Dictyostelium discoideum gamete cDNA clone:FC-BA1...  1033   0.0    2
(AU264869) Dictyostelium discoideum vegetative cDNA clone:VS...   955   0.0    2
(AU262606) Dictyostelium discoideum vegetative cDNA clone:VS...  1033   0.0    2
(AU269450) Dictyostelium discoideum vegetative cDNA clone:VS...   866   0.0    3
(AU264215) Dictyostelium discoideum vegetative cDNA clone:VS...   959   0.0    3
(AU264696) Dictyostelium discoideum vegetative cDNA clone:VS...  1057   0.0    1
(BJ429065) Dictyostelium discoideum cDNA clone:ddv2b09, 3' e...   938   0.0    3
(AU263508) Dictyostelium discoideum vegetative cDNA clone:VS...   870   0.0    4
(BJ429517) Dictyostelium discoideum cDNA clone:ddv3e19, 3' e...   938   0.0    2
(AU284700) Dictyostelium discoideum gamete cDNA clone:FC-BH1...   922   0.0    3
(AU269467) Dictyostelium discoideum vegetative cDNA clone:VS...   934   0.0    3
(AU037745) Dictyostelium discoideum slug cDNA, clone SSE243.      761   0.0    5
(AU261361) Dictyostelium discoideum vegetative cDNA clone:VS...   961   0.0    2
(AU262217) Dictyostelium discoideum vegetative cDNA clone:VS...   961   0.0    2
(AU262166) Dictyostelium discoideum vegetative cDNA clone:VS...   952   0.0    2
(AU262286) Dictyostelium discoideum vegetative cDNA clone:VS...   952   0.0    2
(AU267358) Dictyostelium discoideum vegetative cDNA clone:VS...   975   0.0    1
(AU268079) Dictyostelium discoideum vegetative cDNA clone:VS...   967   0.0    1
(AU263509) Dictyostelium discoideum vegetative cDNA clone:VS...   676   0.0    4
(AU261573) Dictyostelium discoideum vegetative cDNA clone:VS...   926   0.0    2
(AU269449) Dictyostelium discoideum vegetative cDNA clone:VS...   955   0.0    1
(AU264832) Dictyostelium discoideum vegetative cDNA clone:VS...   942   0.0    1
(AU267802) Dictyostelium discoideum vegetative cDNA clone:VS...   940   0.0    1
(BJ411297) Dictyostelium discoideum cDNA clone:ddv3e19, 5' e...   918   0.0    2
(AU268891) Dictyostelium discoideum vegetative cDNA clone:VS...   912   0.0    2
(AU267977) Dictyostelium discoideum vegetative cDNA clone:VS...   866   0.0    1
(AU263313) Dictyostelium discoideum vegetative cDNA clone:VS...   823   0.0    2
(AU051805) Dictyostelium discoideum slug cDNA, clone SSA276.      815   0.0    2
(AU039708) Dictyostelium discoideum slug cDNA, clone SLG232.      813   0.0    2
(AU269418) Dictyostelium discoideum vegetative cDNA clone:VS...   801   0.0    2
(AU266734) Dictyostelium discoideum vegetative cDNA clone:VS...   809   0.0    1
(AU269419) Dictyostelium discoideum vegetative cDNA clone:VS...   781   0.0    2
(C23651) Dictyostelium discoideum gamete cDNA, clone FC-AG12.     753   0.0    2
(AU262381) Dictyostelium discoideum vegetative cDNA clone:VS...   605   0.0    3
(AU268080) Dictyostelium discoideum vegetative cDNA clone:VS...   729   0.0    2
(AU263512) Dictyostelium discoideum vegetative cDNA clone:VS...   716   0.0    1
(AU269927) Dictyostelium discoideum vegetative cDNA clone:VS...   668   0.0    2
(AU263263) Dictyostelium discoideum vegetative cDNA clone:VS...   660   0.0    2
(AU269928) Dictyostelium discoideum vegetative cDNA clone:VS...   668   0.0    1
(BJ409866) Dictyostelium discoideum cDNA clone:ddv10g08, 5' ...   636   e-178  1
(AU263513) Dictyostelium discoideum vegetative cDNA clone:VS...   615   e-171  1
(AU266578) Dictyostelium discoideum vegetative cDNA clone:VS...   541   e-160  2
(AU272298) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   557   e-158  2
(AU272297) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   557   e-158  2
(AU262026) Dictyostelium discoideum vegetative cDNA clone:VS...   482   e-142  2
(AU272005) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   454   e-133  2
(AU072345) Dictyostelium discoideum slug cDNA, clone SSE248.      452   e-123  1
(AU072344) Dictyostelium discoideum slug cDNA, clone SSE243.      452   e-123  1
(AU262208) Dictyostelium discoideum vegetative cDNA clone:VS...   333   2e-97  2
(AU264003) Dictyostelium discoideum vegetative cDNA clone:VS...   337   4e-88  1
(AU272006) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   200   2e-53  2
(BJ427984) Dictyostelium discoideum cDNA clone:ddv10g08, 3' ...   206   2e-53  2
(AU262983) Dictyostelium discoideum vegetative cDNA clone:VS...   165   5e-47  2
(BJ432078) Dictyostelium discoideum cDNA clone:ddv17e16, 3' ...   157   2e-46  2
(EC760802) PSE00007224 rw_mgpallid Polysphondylium pallidum ...    92   2e-40  5
(EC760967) PSE00003280 rw_mgpallid Polysphondylium pallidum ...    92   4e-24  3
(CO220564) WS01010.B21_H22 SS-R-N-A-11 Picea sitchensis cDNA...    62   6e-14  4
(CU614895) Theobroma cacao, mRNA sequence (KZ0AAN12YO01FM1).       56   3e-08  2
(EL433028) CHCS7374.b1_K19.ab1 CHC(LMS) Texas blueweed Helia...    62   4e-08  3
(EH767941) CNSM14809.b1_A08.ab1 CNS(LMS) yellow starthistle ...    62   7e-08  3
(CO209250) WS00914.B21_H19 IS-B-N-A-10 Picea engelmannii x P...    54   1e-07  2
(DR465457) WS00935.B21_J09 IS-B-N-A-10 Picea engelmannii x P...    54   1e-07  2
(CR380957) Candida glabrata strain CBS138 chromosome K compl...    70   1e-07  1
(AL397231) T3 end of clone AS0AA001E06 of library AS0AA from...    68   2e-07  2
(FE860503) CAFY667.fwd CAFY Pichia stipitis oxygen limited x...    68   5e-07  1
(FE860502) CAFY667.rev CAFY Pichia stipitis oxygen limited x...    68   5e-07  1
(FE859903) CAFY1120.fwd CAFY Pichia stipitis oxygen limited ...    68   5e-07  1
(FE859902) CAFY1120.rev CAFY Pichia stipitis oxygen limited ...    68   5e-07  1
(FE853265) CAFP2674.fwd CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE853264) CAFP2674.rev CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE852726) CAFP2395.fwd CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE852725) CAFP2395.rev CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE851958) CAFP1991.fwd CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE851957) CAFP1991.rev CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE851849) CAFP1936.fwd CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE851848) CAFP1936.rev CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE851833) CAFP1928.fwd CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE851832) CAFP1928.rev CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE851376) CAFP1683.fwd CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE851375) CAFP1683.rev CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE850824) CAFP1387.fwd CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE850823) CAFP1387.rev CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE850712) CAFP1326.fwd CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE850515) CAFP1218.fwd CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE850514) CAFP1218.rev CAFP Pichia stipitis aerobic xylose ...    68   5e-07  1
(FE846828) CAFI940.fwd CAFI Pichia stipitis aerobic dextrose...    68   5e-07  1
(FE846827) CAFI940.rev CAFI Pichia stipitis aerobic dextrose...    68   5e-07  1
(FE846676) CAFI860.fwd CAFI Pichia stipitis aerobic dextrose...    68   5e-07  1
(FE846675) CAFI860.rev CAFI Pichia stipitis aerobic dextrose...    68   5e-07  1
(FE846539) CAFI786.fwd CAFI Pichia stipitis aerobic dextrose...    68   5e-07  1
(FE846521) CAFI777.fwd CAFI Pichia stipitis aerobic dextrose...    68   5e-07  1
(FE846520) CAFI777.rev CAFI Pichia stipitis aerobic dextrose...    68   5e-07  1
(FE846475) CAFI754.fwd CAFI Pichia stipitis aerobic dextrose...    68   5e-07  1
(FE846474) CAFI754.rev CAFI Pichia stipitis aerobic dextrose...    68   5e-07  1
(FE846360) CAFI692.fwd CAFI Pichia stipitis aerobic dextrose...    68   5e-07  1
(FE846359) CAFI692.rev CAFI Pichia stipitis aerobic dextrose...    68   5e-07  1
(FE845973) CAFI484.fwd CAFI Pichia stipitis aerobic dextrose...    68   5e-07  1
(FE845972) CAFI484.rev CAFI Pichia stipitis aerobic dextrose...    68   5e-07  1
(FE845720) CAFI1119.fwd CAFI Pichia stipitis aerobic dextros...    68   5e-07  1
(FE845719) CAFI1119.rev CAFI Pichia stipitis aerobic dextros...    68   5e-07  1
(EL432881) CHCS7237.b1_J10.ab1 CHC(LMS) Texas blueweed Helia...    62   1e-06  2
(DV186025) CT057_D11_CT057_3700_90.ab1 C. tentans tissue cul...    44   5e-06  2
(DV185273) CT047_A09_CT047_3700_91.ab1 C. tentans tissue cul...    44   5e-06  2
(DV190170) BCT053_A03_BCT053_3700_90.ab1 C. tentans, embryo ...    44   6e-06  2
(DV185217) CT046_C10_CT046_3700_91.ab1 C. tentans tissue cul...    44   6e-06  2
(DV185315) CT047_E12_CT047_3700_91.ab1 C. tentans tissue cul...    44   6e-06  2
(DV186672) CT066_F06_CT066_3700_90.ab1 C. tentans tissue cul...    44   6e-06  2
(DV182979) CT016_A11_CT016_3700_91.ab1 C. tentans tissue cul...    44   6e-06  2
(DV185397) CT048_F09_CT048_3700_90.ab1 C. tentans tissue cul...    44   6e-06  2
(DV186671) CT066_F05_CT066_3700_90.ab1 C. tentans tissue cul...    44   6e-06  2
(DV184609) CT037_G06_CT037_3700_91.ab1 C. tentans tissue cul...    44   6e-06  2
(DV183610) CT025_A03_CT025_3700_90.ab1 C. tentans tissue cul...    44   6e-06  2
(DV182694) CT012_C07_CT012_3700_91.ab1 C. tentans tissue cul...    44   6e-06  2
(DV186617) CT065_H04_CT065_3700_90.ab1 C. tentans tissue cul...    44   6e-06  2
(DV184440) CT035_G05_CT035_3700_90.ab1 C. tentans tissue cul...    44   6e-06  2
(CN594890) TTE00011867 Normalized large Tetrahymena thermoph...    52   8e-06  2
(CN593136) TTE00014027 Normalized large Tetrahymena thermoph...    52   8e-06  2
(CN591646) TTE00009391 Normalized large Tetrahymena thermoph...    52   8e-06  2
(CN591459) TTE00006239 Normalized large Tetrahymena thermoph...    52   8e-06  2
(EV835839) TTSA874TH Tetrahymena thermophila SB210 cDNA libr...    52   8e-06  2
(FF568838) TTBBV66TVB Tetrahymena thermophila CU428 log phas...    52   8e-06  2
(EV844595) TTSAO26TH Tetrahymena thermophila SB210 cDNA libr...    52   8e-06  2
(FF570408) TTCA266TG Tetrahymena thermophila CU428 log phase...    52   8e-06  2
(FF566337) TTBA095TV Tetrahymena thermophila CU428 log phase...    52   8e-06  2
(EV827739) TT1DM76TH Tetrahymena thermophila SB210 cDNA libr...    52   8e-06  2
(FF569725) TTBCK21TV Tetrahymena thermophila CU428 log phase...    52   8e-06  2
(EC273846) TT1CE71TH Tetrahymena thermophila SB210 cDNA libr...    52   8e-06  2
(FF566336) TTBA095TG Tetrahymena thermophila CU428 log phase...    52   8e-06  2
(FF567850) TTBB254TG Tetrahymena thermophila CU428 log phase...    52   8e-06  2
(CN590862) TTE00010552 Normalized large Tetrahymena thermoph...    52   8e-06  2
(EV835076) TTSAN24TH Tetrahymena thermophila SB210 cDNA libr...    52   8e-06  2
(FF568309) TTBBG36TG Tetrahymena thermophila CU428 log phase...    52   8e-06  2
(EV837860) TTSA674TH Tetrahymena thermophila SB210 cDNA libr...    52   8e-06  2
(EV844784) TTSAQ78TH Tetrahymena thermophila SB210 cDNA libr...    52   8e-06  2
(EV845286) TTSB656TH Tetrahymena thermophila SB210 cDNA libr...    52   8e-06  2
(EV834297) TT1D621TV Tetrahymena thermophila SB210 cDNA libr...    52   8e-06  2
(EV834296) TT1D621TH Tetrahymena thermophila SB210 cDNA libr...    52   8e-06  2
(EC273847) TT1CE71TV Tetrahymena thermophila SB210 cDNA libr...    52   8e-06  2
(EV845571) TTSAW35TH Tetrahymena thermophila SB210 cDNA libr...    52   9e-06  2
(EV844785) TTSAQ32TH Tetrahymena thermophila SB210 cDNA libr...    52   9e-06  2
(EV845570) TTSAW29TH Tetrahymena thermophila SB210 cDNA libr...    52   9e-06  2
(CN590004) TTE00004332 Normalized large Tetrahymena thermoph...    52   9e-06  2
(EV845031) TTSB551TH Tetrahymena thermophila SB210 cDNA libr...    52   9e-06  2
(EC271302) TT1CG69TH Tetrahymena thermophila SB210 cDNA libr...    52   9e-06  2
(DB668240) Saccharomyces cerevisiae mRNA, clone: Y116_A13_F....    44   9e-06  3
(AL427914) clone BA0AB022E06 of library BA0AB from strain CL...    62   9e-06  2
(FG087624) CMRC-FF-IH0-ach-b-04-0-CMRC.r1 Ceratitis capitata...    40   1e-05  4
(AX073154) Sequence 265 from Patent WO0102550.                     44   1e-05  4
(DL267900) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS.       60   2e-05  2
(DJ134349) Method for identification of useful proteins deri...    60   2e-05  2
(FG087268) CMRC-FF-IH0-acg-f-23-0-CMRC.r1 Ceratitis capitata...    40   2e-05  4
(FG085094) CMRC-FF-IH0-abz-k-20-0-CMRC.r1 Ceratitis capitata...    40   2e-05  4
(FG069958) UI-FF-IF0-aaf-g-18-0-UI.r1 Ceratitis capitata emb...    40   2e-05  4
(FG081128) UI-FF-IH0-aav-f-18-0-UI.r1 Ceratitis capitata adu...    40   2e-05  4
(FG073473) UI-FF-IF0-abf-p-18-0-UI.r1 Ceratitis capitata emb...    40   2e-05  4
(FG068725) UI-FF-IF0-aab-k-09-0-UI.r1 Ceratitis capitata emb...    40   2e-05  4
(FG072522) UI-FF-IF0-aam-e-10-0-UI.r1 Ceratitis capitata emb...    40   2e-05  4
(FG073076) UI-FF-IF0-aan-h-24-0-UI.r1 Ceratitis capitata emb...    40   2e-05  4
(AM722652) Cucumis melo subsp. melo EST, clone PSI_05-G01-M13R.    40   2e-05  4
(FG082507) UI-FF-IH0-abb-a-05-0-UI.r1 Ceratitis capitata adu...    40   2e-05  4
(DL268263) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS.       46   2e-05  3
(DJ134712) Method for identification of useful proteins deri...    46   2e-05  3
(GO037699) LJNA219TO JCVI-LJ3 Lotus japonicus cDNA 3', mRNA ...    42   2e-05  3
(FE250740) CAPH3032.rev CAPH Naegleria gruberi amoeba stage ...    40   3e-05  4
(FE257385) CAPH660.rev CAPH Naegleria gruberi amoeba stage N...    40   3e-05  4
(CR382126) Kluyveromyces lactis strain NRRL Y-1140 chromosom...    62   3e-05  1
(AE016819) Ashbya gossypii (= Eremothecium gossypii) ATCC 10...    62   3e-05  1
(FE259389) CAPH7665.rev CAPH Naegleria gruberi amoeba stage ...    40   3e-05  4
(Z75220) S.cerevisiae chromosome XV reading frame ORF YOR312c.     44   3e-05  4
(FE259390) CAPH7665.fwd CAPH Naegleria gruberi amoeba stage ...    40   3e-05  4
(FE254049) CAPH4856.rev CAPH Naegleria gruberi amoeba stage ...    40   3e-05  4
(GO031540) LJNA219TF JCVI-LJ3 Lotus japonicus cDNA 5', mRNA ...    42   3e-05  3
(FE263224) CAZO3116.rev CAZO Naegleria gruberi Flagellate St...    40   4e-05  4
(FE254050) CAPH4856.fwd CAPH Naegleria gruberi amoeba stage ...    40   4e-05  4
(FE259217) CAPH757.fwd CAPH Naegleria gruberi amoeba stage N...    40   4e-05  4
(FE249571) CAPH2356.rev CAPH Naegleria gruberi amoeba stage ...    40   5e-05  4
(FE249038) CAPH2049.rev CAPH Naegleria gruberi amoeba stage ...    40   5e-05  4
(FE256474) CAPH6134.rev CAPH Naegleria gruberi amoeba stage ...    40   5e-05  4
(FE265917) CAZO4800.rev CAZO Naegleria gruberi Flagellate St...    40   5e-05  4
(FE255899) CAPH5831.rev CAPH Naegleria gruberi amoeba stage ...    40   5e-05  4
(FE247775) CAPH1305.rev CAPH Naegleria gruberi amoeba stage ...    40   5e-05  4
(FE245629) CAPG8979.rev CAPG Naegleria gruberi amoeba stage ...    40   5e-05  4
(FE263225) CAZO3116.fwd CAZO Naegleria gruberi Flagellate St...    40   6e-05  4
(FE250788) CAPH3064.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE262194) CAZO2469.rev CAZO Naegleria gruberi Flagellate St...    40   6e-05  4
(FE262195) CAZO2469.fwd CAZO Naegleria gruberi Flagellate St...    40   6e-05  4
(BI450418) kt25d04.y3 Strongyloides ratti L1 pAMP1 v3 Chiape...    56   6e-05  2
(FE251129) CAPH3269.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE250958) CAPH3167.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE257468) CAPH6646.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE255229) CAPH5477.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE253004) CAPH4306.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE251679) CAPH3591.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE255378) CAPH5551.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE260702) CAZO1147.rev CAZO Naegleria gruberi Flagellate St...    40   6e-05  4
(FE249702) CAPH2429.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE260703) CAZO1147.fwd CAZO Naegleria gruberi Flagellate St...    40   6e-05  4
(FE259656) CAPH7822.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE259655) CAPH7822.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE258839) CAPH7358.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE256090) CAPH5934.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE252516) CAPH4057.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE252163) CAPH3866.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE247922) CAPH1384.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(DL344307) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS.       44   6e-05  3
(DJ210756) Method for identification of useful proteins deri...    44   6e-05  3
(FE266643) CAZO5246.fwd CAZO Naegleria gruberi Flagellate St...    40   6e-05  4
(FE266642) CAZO5246.rev CAZO Naegleria gruberi Flagellate St...    40   6e-05  4
(FE249039) CAPH2049.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE265918) CAZO4800.fwd CAZO Naegleria gruberi Flagellate St...    40   6e-05  4
(FE259811) CAPH7920.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE253450) CAPH4542.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE252515) CAPH4057.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE251489) CAPH3478.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE251424) CAPH3437.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE255900) CAPH5831.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE251136) CAPH3273.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE258686) CAPH7274.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE248537) CAPH1750.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE253185) CAPH4404.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE249572) CAPH2356.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE253186) CAPH4404.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE258784) CAPH7325.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE257386) CAPH660.fwd CAPH Naegleria gruberi amoeba stage N...    40   6e-05  4
(FE253751) CAPH4703.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE261917) CAZO2299.fwd CAZO Naegleria gruberi Flagellate St...    40   6e-05  4
(FE250789) CAPH3064.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE245630) CAPG8979.fwd CAPG Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE251130) CAPH3269.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE255230) CAPH5477.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE250959) CAPH3167.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE255289) CAPH5506.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE255288) CAPH5506.rev CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE247923) CAPH1384.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE253005) CAPH4306.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE251680) CAPH3591.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE250741) CAPH3032.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE256091) CAPH5934.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE251425) CAPH3437.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE257469) CAPH6646.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE256475) CAPH6134.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE252164) CAPH3866.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE253451) CAPH4542.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE258840) CAPH7358.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE258687) CAPH7274.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE255379) CAPH5551.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(FE248538) CAPH1750.fwd CAPH Naegleria gruberi amoeba stage ...    40   6e-05  4
(BG301484) kt01g02.y1 Strongyloides ratti L1 SL1 Topo1 Chiap...    56   7e-05  2
(FE251137) CAPH3273.fwd CAPH Naegleria gruberi amoeba stage ...    40   7e-05  4
(FE251490) CAPH3478.fwd CAPH Naegleria gruberi amoeba stage ...    40   7e-05  4
(FE261130) CAZO1810.fwd CAZO Naegleria gruberi Flagellate St...    40   7e-05  4
(FE261129) CAZO1810.rev CAZO Naegleria gruberi Flagellate St...    40   7e-05  4
(FE259812) CAPH7920.fwd CAPH Naegleria gruberi amoeba stage ...    40   7e-05  4
(FE258966) CAPH7430.fwd CAPH Naegleria gruberi amoeba stage ...    40   7e-05  4
(FE258965) CAPH7430.rev CAPH Naegleria gruberi amoeba stage ...    40   7e-05  4
(FE258785) CAPH7325.fwd CAPH Naegleria gruberi amoeba stage ...    40   7e-05  4
(FE249703) CAPH2429.fwd CAPH Naegleria gruberi amoeba stage ...    40   7e-05  4
(FE253752) CAPH4703.fwd CAPH Naegleria gruberi amoeba stage ...    40   7e-05  4
(FC816650) Sr_pAMT7_06l08_T7 S. ratti mixed stage pAMP Stron...    56   7e-05  2
(FE261916) CAZO2299.rev CAZO Naegleria gruberi Flagellate St...    40   7e-05  4
(BG301945) kt07e05.y1 Strongyloides ratti L3 adult SL1 Topo1...    56   7e-05  2
(FE256870) CAPH6332.fwd CAPH Naegleria gruberi amoeba stage ...    40   7e-05  4
(FE256869) CAPH6332.rev CAPH Naegleria gruberi amoeba stage ...    40   7e-05  4
(BI450995) kt80d02.y4 Strongyloides ratti L2 SL1 TOPO v2 Str...    56   7e-05  2
(BI450863) kt78f04.y4 Strongyloides ratti L2 SL1 TOPO v2 Str...    56   7e-05  2
(BG301880) kt06f01.y1 Strongyloides ratti L3 adult SL1 Topo1...    56   7e-05  2
(BI450914) kt79c02.y4 Strongyloides ratti L2 SL1 TOPO v2 Str...    56   7e-05  2
(BG301560) kt02f02.y1 Strongyloides ratti L1 SL1 Topo1 Chiap...    56   7e-05  2
(BG301510) kt02a07.y1 Strongyloides ratti L1 SL1 Topo1 Chiap...    56   7e-05  2
(FE247776) CAPH1305.fwd CAPH Naegleria gruberi amoeba stage ...    40   7e-05  4
(FE257330) CAPH6570.fwd CAPH Naegleria gruberi amoeba stage ...    40   7e-05  4
(FE257329) CAPH6570.rev CAPH Naegleria gruberi amoeba stage ...    40   7e-05  4
(BI451019) kt80g08.y4 Strongyloides ratti L2 SL1 TOPO v2 Str...    56   7e-05  2
(BI451005) kt80e05.y4 Strongyloides ratti L2 SL1 TOPO v2 Str...    56   8e-05  2
(BG301429) kt04c02.y1 Strongyloides ratti L1 SL1 Topo1 Chiap...    56   8e-05  2
(BI451008) kt80e10.y4 Strongyloides ratti L2 SL1 TOPO v2 Str...    56   8e-05  2
(CB275054) ku62d08.y1 Strongyloides ratti PA female naive SL...    56   8e-05  2
(BG301728) kt08g02.y1 Strongyloides ratti L3 adult SL1 Topo1...    56   8e-05  2
(FC821657) Sr_TOPOR_019m22_TOPOR S. ratti mixed stage TOPO S...    56   9e-05  2
(FC821050) Sr_TOPOF_19n12_TOPOF S. ratti mixed stage TOPO St...    56   9e-05  2
(FC821603) Sr_TOPOR_019k02_TOPOR S. ratti mixed stage TOPO S...    56   9e-05  2
(FE338882) CAOF1222.fwd CAOF_Daphnia_pulex_Log50_Library_12 ...    48   9e-05  2
(FE338881) CAOF1222.rev CAOF_Daphnia_pulex_Log50_Library_12 ...    48   9e-05  2
(FC810073) Sr_pASP6_03b16_SP6 S. ratti mixed stage pAMP Stro...    56   1e-04  2
(DB667955) Saccharomyces cerevisiae mRNA, clone: Y113_N01_F....    44   1e-04  3
(DB665633) Saccharomyces cerevisiae mRNA, clone: Y099_P23_F....    44   1e-04  3
(DB663077) Saccharomyces cerevisiae mRNA, clone: Y083_B14_F....    44   1e-04  3
(CU617444) Theobroma cacao, mRNA sequence (KZ0AAN4YB24FM1).        60   1e-04  1
(DQ332860) Synthetic construct Saccharomyces cerevisiae clon...    44   2e-04  3
(AM049059) Hister sp. APV-2005 mRNA for ribosomal protein L1...    50   3e-04  2
(CV158654) HISTERID45PCR_D11_1_091 Hister sp. cDNA Hister sp...    50   3e-04  2
(CV158509) HISTERID25PCR_D08_1_063 Hister sp. cDNA Hister sp...    50   3e-04  2
(FF537577) MOPA510TF MOP Vigna unguiculata cDNA 5', mRNA seq...    38   0.001  3
(EW779703) OoSal129 Asian rice gall midge salivary gland cDN...    48   0.001  2
(FF394229) MOODT13TR MOO Vigna unguiculata cDNA 3', mRNA seq...    38   0.001  3
(FD933258) OoSal799 Asian rice gall midge salivary gland cDN...    48   0.002  2
(FG809282) UCRVU04_CCNI10945_b1 Cowpea 524B Mixed Tissue and...    38   0.002  3
(EV835621) TTSB113TH Tetrahymena thermophila SB210 cDNA libr...    44   0.002  2
(FC428979) CAYZ9116.fwd CAYZ Physcomitrella patens subsp. pa...    38   0.002  2
(FC448183) CBAX4971.fwd CBAX Physcomitrella patens subsp. pa...    38   0.002  2
(FC448182) CBAX4971.rev CBAX Physcomitrella patens subsp. pa...    38   0.002  2
(BJ946793) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(BJ946118) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(FC421883) CAYZ5419.fwd CAYZ Physcomitrella patens subsp. pa...    38   0.002  2
(FC420404) CAYZ4652.fwd CAYZ Physcomitrella patens subsp. pa...    38   0.002  2
(FC416286) CAYZ34219.fwd CAYZ Physcomitrella patens subsp. p...    38   0.002  2
(FC416285) CAYZ34219.rev CAYZ Physcomitrella patens subsp. p...    38   0.002  2
(FC438223) CBAX12255.fwd CBAX Physcomitrella patens subsp. p...    38   0.002  2
(FC438222) CBAX12255.rev CBAX Physcomitrella patens subsp. p...    38   0.002  2
(FC421882) CAYZ5419.rev CAYZ Physcomitrella patens subsp. pa...    38   0.002  2
(BJ945276) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(BJ609567) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(DC910383) Physcomitrella patens subsp. patens cDNA, clone:p...    38   0.002  2
(FC428978) CAYZ9116.rev CAYZ Physcomitrella patens subsp. pa...    38   0.002  2
(FC387213) CAYZ16316.fwd CAYZ Physcomitrella patens subsp. p...    38   0.002  2
(FC387212) CAYZ16316.rev CAYZ Physcomitrella patens subsp. p...    38   0.002  2
(FC441717) CBAX14098.fwd CBAX Physcomitrella patens subsp. p...    38   0.002  2
(FC441716) CBAX14098.rev CBAX Physcomitrella patens subsp. p...    38   0.002  2
(BJ965473) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(BJ957590) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(BJ602213) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(FC407903) CAYZ29428.rev CAYZ Physcomitrella patens subsp. p...    38   0.002  2
(BJ189633) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(BJ973992) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(BJ956912) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(BJ580745) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(DC924217) Physcomitrella patens subsp. patens cDNA, clone:p...    38   0.002  2
(FC424954) CAYZ6987.fwd CAYZ Physcomitrella patens subsp. pa...    38   0.002  2
(BJ588028) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(BJ204037) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(FG905592) UCRVU08_CCNS4096_b1 Cowpea IT97K-461-4 Mixed Tiss...    38   0.002  3
(BJ175521) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(BJ956058) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(AW700012) gb37c02.y1 Moss EST library PPN Physcomitrella pa...    38   0.002  2
(BJ202992) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(BI741171) gc94g05.y1 Moss EST library PPN Physcomitrella pa...    38   0.002  2
(BJ205295) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(BJ952462) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(BJ182740) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(BJ941831) Physcomitrella patens subsp. patens cDNA clone:pp...    38   0.002  2
(AW739212) gb38e08.y1 Moss EST library PPN Physcomitrella pa...    38   0.002  2
(BI741540) gc87f11.y1 Moss EST library PPN Physcomitrella pa...    38   0.002  2
(BI487530) gc66f10.y1 Moss EST library PPN Physcomitrella pa...    38   0.002  2
(AW739357) gb40h04.y1 Moss EST library PPN Physcomitrella pa...    38   0.002  2
(BQ040736) gd37h06.y1 Moss EST library PPS Physcomitrella pa...    38   0.002  2
(AW739340) gb40f04.y1 Moss EST library PPN Physcomitrella pa...    38   0.002  2
(FG891472) UCRVU08_CCNS11782_g1 Cowpea IT97K-461-4 Mixed Tis...    38   0.002  3
(FG863333) UCRVU07_CCNP1881_b1 Cowpea UCR 779 Mixed Tissue a...    38   0.002  3
(CO438077) GDBN93 Glycyphagus domesticus cDNA library Glycyp...    56   0.002  1
(CB097481) ku41c07.y1 Strongyloides ratti PA female naive pA...    56   0.002  1
(BI502217) kt86g11.y1 Strongyloides ratti L2 pAMP1 v1 Chiape...    56   0.002  1
(BI502142) kt85h03.y1 Strongyloides ratti L2 pAMP1 v1 Chiape...    56   0.002  1
(BI450933) kt79e02.y4 Strongyloides ratti L2 SL1 TOPO v2 Str...    56   0.002  1
(BI450932) kt79e01.y4 Strongyloides ratti L2 SL1 TOPO v2 Str...    56   0.002  1
(BI450834) kt78c08.y4 Strongyloides ratti L2 SL1 TOPO v2 Str...    56   0.002  1
(BI142484) kt77b05.y1 Strongyloides ratti L2 SL1 TOPO v2 Str...    56   0.002  1
(BG893886) kt16h07.y1 Strongyloides ratti L1 pAMP1 v3 Chiape...    56   0.002  1
(FC820977) Sr_TOPOF_19k02_TOPOF S. ratti mixed stage TOPO St...    56   0.002  1
(FC817578) Sr_pAMT7_09f06_T7 S. ratti mixed stage pAMP Stron...    56   0.002  1
(FC815028) Sr_pAMT7_01o01_T7 S. ratti mixed stage pAMP Stron...    56   0.002  1
(AU264870) Dictyostelium discoideum vegetative cDNA clone:VS...    40   0.002  2
(FG891471) UCRVU08_CCNS11782_b1 Cowpea IT97K-461-4 Mixed Tis...    38   0.002  3
(EW761119) ST010001000G11 Normalized and subtracted western ...    50   0.002  2
(FF400376) MOOEW68TF MOO Vigna unguiculata cDNA 5', mRNA seq...    38   0.002  3
(FC459840) UCRVU09_CCNT437_b1 Cowpea UCR 707 Mixed Tissue an...    38   0.002  3
(CU612690) Theobroma cacao, mRNA sequence (KZ0ACAH1YC20FM1).       44   0.004  2
(EG326831) EST_63 Caste=Queen, Stage=1st, 2nd, and 3rd larva...    50   0.004  2
(DV183799) CT027_C03_CT027_3700_90.ab1 C. tentans tissue cul...    44   0.004  2
(DN608314) EST03525 Sporophyte cDNA Library Porphyra haitane...    48   0.004  2
(EW761322) ST020012B21A08 Normalized and subtracted western ...    50   0.004  2
(CN497632) C05_02627.AB1 Diabrotica virgifera virgifera midg...    50   0.004  2
(EG325524) EST_1426 Caste=Queen, Stage=Egg Vespula squamosa ...    50   0.004  2
(EW762677) ST020014A20H08 Normalized and subtracted western ...    50   0.004  2
(CN498748) H10_01424.AB1 Diabrotica virgifera virgifera midg...    50   0.004  2
(EW766720) ST040013A20D03 Normalized and subtracted western ...    50   0.005  2
(FE256075) CAPH5926.fwd CAPH Naegleria gruberi amoeba stage ...    38   0.007  3
(CZ278610) cp01a11.f Candida parapsilosis Random Genomic Lib...    54   0.008  1
(ES497974) BIG_AF_5790 Brine Shrimp Adult (20 days after hat...    44   0.013  2
(ES526573) BIG_AF_34393 Brine Shrimp embryos, 15 hours after...    44   0.013  2
(ES506897) BIG_AF_14714 Brine Shrimp diapaused embryos (cyst...    44   0.013  2
(BI742358) kt38g02.y1 Strongyloides ratti L2 pAMP1 v1 Chiape...    48   0.014  2
(ES496124) BIG_AF_3940 Brine Shrimp Adult (20 days after hat...    44   0.014  2
(ES502886) BIG_AF_10703 Brine Shrimp diapaused embryos (cyst...    44   0.015  2
(CR931308) Danio rerio EST sequence, clone 261-C03-2.              44   0.015  2
(DL341034) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS.       44   0.015  3
(DJ207483) Method for identification of useful proteins deri...    44   0.015  3
(ES503375) BIG_AF_11192 Brine Shrimp diapaused embryos (cyst...    44   0.015  2
(ES500066) BIG_AF_7882 Brine Shrimp diapaused embryos (cysts...    44   0.015  2
(ES502526) BIG_AF_10343 Brine Shrimp diapaused embryos (cyst...    44   0.016  2
(ES520134) BIG_AF_26288 Brine Shrimp embryos, 15 hours after...    44   0.016  2
(ES499352) BIG_AF_7168 Brine Shrimp diapaused embryos (cysts...    44   0.016  2
(CU867176) Podospora anserina mRNA 5-prime sequence from clo...    44   0.016  2
(ES498056) BIG_AF_5872 Brine Shrimp Adult (20 days after hat...    44   0.016  2
(FE538803) CAXB2212.b2 CAXB Symbiodinium sp. KB8 Symbiodiniu...    48   0.017  2
(EF660910) Artemia franciscana clone 18PN8.06 ribosomal prot...    44   0.017  2
(FE538804) CAXB2212.g2 CAXB Symbiodinium sp. KB8 Symbiodiniu...    48   0.017  2
(CU894436) Podospora anserina mRNA sequence from clone HH0AA...    44   0.017  2
(CU893408) Podospora anserina mRNA sequence from clone HH0AA...    44   0.017  2
(FC821036) Sr_TOPOF_19m22_TOPOF S. ratti mixed stage TOPO St...    48   0.018  2
(CU894006) Podospora anserina mRNA sequence from clone HH0AA...    44   0.018  2
(CU866287) Podospora anserina mRNA 5-prime sequence from clo...    44   0.018  2
(CU892668) Podospora anserina mRNA sequence from clone HH0AB...    44   0.019  2
(CU914030) Podospora anserina mRNA sequence from clone HH0AB...    44   0.019  2
(CU864695) Podospora anserina mRNA sequence from clone HH0AB...    44   0.019  2
(CU862099) Podospora anserina mRNA sequence from clone HH0AB...    44   0.019  2
(CU871424) Podospora anserina mRNA 5-prime sequence from clo...    44   0.019  2
(CU873330) Podospora anserina mRNA sequence from clone HH0AB...    44   0.019  2
(CU867516) Podospora anserina mRNA 5-prime sequence from clo...    44   0.019  2
(CU882829) Podospora anserina mRNA sequence from clone HH0AB...    44   0.019  2
(CU896305) Podospora anserina mRNA sequence from clone HH0AA...    44   0.019  2
(CU864418) Podospora anserina mRNA sequence from clone HH0AB...    44   0.019  2
(CU894547) Podospora anserina mRNA sequence from clone HH0AA...    44   0.019  2
(CU893814) Podospora anserina mRNA sequence from clone HH0AA...    44   0.019  2
(CU881843) Podospora anserina mRNA 5-prime sequence from clo...    44   0.019  2
(CU895450) Podospora anserina mRNA sequence from clone HH0AA...    44   0.019  2
(CU894975) Podospora anserina mRNA sequence from clone HH0AA...    44   0.020  2
(CU863233) Podospora anserina mRNA sequence from clone HH0AB...    44   0.020  2
(EH010915) USDA-FP_183967 Lysiphlebus testaceipes adult whol...    32   0.020  4
(EH016543) USDA-FP_189033 Lysiphlebus testaceipes adult whol...    32   0.020  4
(DB666742) Saccharomyces cerevisiae mRNA, clone: Y106_N19_F....    44   0.021  3
(CU884840) Podospora anserina mRNA sequence from clone HH0AB...    44   0.021  2
(CU889840) Podospora anserina mRNA sequence from clone HH0AB...    44   0.021  2
(CU871679) Podospora anserina mRNA sequence from clone HH0AB...    44   0.021  2
(FE422723) CBTX3520.rev CBTX_Daphnia_pulex_Chosen_One_Librar...    34   0.021  3
(CU871540) Podospora anserina mRNA 5-prime sequence from clo...    44   0.021  2
(DB663717) Saccharomyces cerevisiae mRNA, clone: Y087_M16_F....    44   0.021  3
(FE422724) CBTX3520.fwd CBTX_Daphnia_pulex_Chosen_One_Librar...    34   0.021  3
(CU864980) Podospora anserina mRNA sequence from clone HH0AB...    44   0.021  2
(DB658898) Saccharomyces cerevisiae mRNA, clone: Y050_A20_F....    44   0.021  3
(DB653105) Saccharomyces cerevisiae mRNA, clone: Y007_G24_F....    44   0.022  3
(DB656184) Saccharomyces cerevisiae mRNA, clone: Y033_I16_F....    44   0.022  3
(AY961511) Lysiphlebus testaceipes ribosomal protein L18a (R...    32   0.023  4
(CU887802) Podospora anserina mRNA sequence from clone HH0AB...    44   0.024  2
(EH011993) USDA-FP_182094 Lysiphlebus testaceipes adult whol...    32   0.025  4
(FD463372) LARVZ02TR Haematobia irritans 1st Instar Larvae H...    48   0.028  2
(FD458405) LARV282TR Haematobia irritans 1st Instar Larvae H...    48   0.029  2
(FD458404) LARV282TF Haematobia irritans 1st Instar Larvae H...    48   0.029  2
(AZ923585) 4908.gf21i02.s1 Saccharomyces cariocanus UFRJ 507...    52   0.030  1
(AZ923565) 4908.gf21g24.s1 Saccharomyces cariocanus UFRJ 507...    52   0.030  1
(DN135693) tam59a01.y2 Hydra_EST_HyEch_JUMY_T2 Hydractinia e...    52   0.030  1
(CU613690) Theobroma cacao, mRNA sequence (KZ0ACAH5YM05FM1).       52   0.030  1
(CO720439) tai44c09.y1 HyEch JUMY T1 Hydractinia echinata cD...    52   0.030  1
(CO720351) tai42h09.y1 HyEch JUMY T1 Hydractinia echinata cD...    52   0.030  1
(CO720191) tai40b12.y1 HyEch JUMY T1 Hydractinia echinata cD...    52   0.030  1
(CO539966) tai14b01.y1 HyEch JUMY T1 Hydractinia echinata cD...    52   0.030  1
(CO539057) tai06c06.y1 HyEch JUMY T1 Hydractinia echinata cD...    52   0.030  1
(CO535595) tai04g06.y1 HyEch JUMY T1 Hydractinia echinata cD...    52   0.030  1
(CO535316) tai04g06.x1 HyEch JUMY T1 Hydractinia echinata cD...    52   0.030  1
(CK104906) I062P76.5pR Populus senescing leaves cDNA library...    52   0.030  1
(BI125548) I062P76P Populus leaf cDNA library Populus tremul...    52   0.030  1
(FD449939) EGGA238TF Haematobia irritans eggs Haematobia irr...    48   0.030  2
(FD457315) EGGBD20TF Haematobia irritans eggs Haematobia irr...    48   0.031  2
(FD449940) EGGA238TR Haematobia irritans eggs Haematobia irr...    48   0.031  2
(EH009947) USDA-FP_183094 Lysiphlebus testaceipes adult whol...    32   0.036  4
(CN120790) EC0CAA005CE02.g1 Xenopus tropicalis xthr plasmid ...    38   0.036  2
(EH015777) USDA-FP_188344 Lysiphlebus testaceipes adult whol...    32   0.037  4
(BW570181) Ciona savignyi cDNA, clone:cstb017l07, 3'end, sin...    36   0.037  3
(AM049060) Meladema coriacea partial mRNA for ribosomal prot...    34   0.040  3
(CN109207) EC2CAA33BD02.b1 Xenopus tropicalis xthr plasmid l...    38   0.040  2
(BQ477247) meladema6h11.g Meladema coriacea cDNA Meladema co...    34   0.040  3
(EH016645) USDA-FP_189125 Lysiphlebus testaceipes adult whol...    32   0.040  4
(EF059405) Synthetic construct Saccharomyces cerevisiae clon...    44   0.045  3
(CN109208) EC2CAA33BD02.g1 Xenopus tropicalis xthr plasmid l...    38   0.046  2
(BW541937) Ciona savignyi cDNA, clone:cstb017l07, 5'end, sin...    36   0.047  3
(CN113052) EC2CAA39CG04.b1 Xenopus tropicalis xthr plasmid l...    38   0.047  2
(CN108278) EC2CAA31CE09.b1 Xenopus tropicalis xthr plasmid l...    38   0.047  2
(CN115714) EC2CAA43AH11.g1 Xenopus tropicalis xthr plasmid l...    38   0.048  2
(EC010449) 1069884 JF08 Tribolium castaneum cDNA clone 51632...    48   0.049  2
(DN649885) G7023.92 Exelixis Tribolium castaneum cDNA Librar...    48   0.049  2
(CN120468) EC0CAA004CG07.g1 Xenopus tropicalis xthr plasmid ...    38   0.049  2
(BW589676) Ciona savignyi cDNA, clone:csef026d06, 5'end, sin...    36   0.049  3
(CN108279) EC2CAA31CE09.g1 Xenopus tropicalis xthr plasmid l...    38   0.050  2
(CB336325) Tc015E02R Tribolium castaneum embryonic cDNA libr...    48   0.051  2
(CN117103) EC2CAA45DF04.g1 Xenopus tropicalis xthr plasmid l...    38   0.052  2
(EC009779) 1070968 JF08 Tribolium castaneum cDNA clone 51749...    48   0.053  2
(DN649887) G7054.92 Exelixis Tribolium castaneum cDNA Librar...    48   0.053  2

>(AU268892) Dictyostelium discoideum vegetative cDNA clone:VSI561,
           3' end single read.
          Length = 613

 Score = 1126 bits (568), Expect(2) = 0.0
 Identities = 568/568 (100%)
 Strand = Plus / Plus


Query: 36  gttgaatccttaatacattcagaatgcctatccacgaattccaagttgttggtcgtcacg 95
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36  gttgaatccttaatacattcagaatgcctatccacgaattccaagttgttggtcgtcacg 95


Query: 96  ttccaactgaaagagatgcaaacccaaaaatctacagaatgagactctttgctcaaacct 155
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ttccaactgaaagagatgcaaacccaaaaatctacagaatgagactctttgctcaaacct 155


Query: 156 caatccacgctaagagccgtttctggtatttcttatcaaagattgttaagatgaagaaat 215
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 caatccacgctaagagccgtttctggtatttcttatcaaagattgttaagatgaagaaat 215


Query: 216 ccactggtgaaatcctcaacgtcactgaaatctttgaagataaaccacaaaaagttaaga 275
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ccactggtgaaatcctcaacgtcactgaaatctttgaagataaaccacaaaaagttaaga 275


Query: 276 actttggtgtattcatcagatacaactctagatctggtacccacaacatctacaaggaat 335
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 actttggtgtattcatcagatacaactctagatctggtacccacaacatctacaaggaat 335


Query: 336 acagagatctcactcgttgtggtgctgtttctcaaatgtacgacgaaatggcctcacgtc 395
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 acagagatctcactcgttgtggtgctgtttctcaaatgtacgacgaaatggcctcacgtc 395


Query: 396 actctgctcgtgaatcatccatccatatcattgatatcaaggaaatcgccgcctcattaa 455
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 actctgctcgtgaatcatccatccatatcattgatatcaaggaaatcgccgcctcattaa 455


Query: 456 ccagacgtgccaacactaaacaattccacgattcaaagattaaattcccattaactcaca 515
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ccagacgtgccaacactaaacaattccacgattcaaagattaaattcccattaactcaca 515


Query: 516 gaattgctaaatcaaaatcaacctttgttgccaacagaccaaataccttcttctgttaaa 575
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaattgctaaatcaaaatcaacctttgttgccaacagaccaaataccttcttctgttaaa 575


Query: 576 tttagattttaggtgccatatatactaa 603
           ||||||||||||||||||||||||||||
Sbjct: 576 tttagattttaggtgccatatatactaa 603

 Score = 34.2 bits (17), Expect(2) = 0.0
 Identities = 17/17 (100%)
 Strand = Plus / Plus


Query: 1  ctcaaaatcaattaaaa 17
          |||||||||||||||||
Sbjct: 1  ctcaaaatcaattaaaa 17

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 680,090,086
Number of extensions: 38183491
Number of successful extensions: 2931280
Number of sequences better than 10.0: 1352
Length of query: 721
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 697
Effective length of database: 99,340,224,878
Effective search space: 69240136739966
Effective search space used: 69240136739966
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.28
Homology vs Protein 
Query= Contig-U16482-1 (Contig-U16482-1Q) /CSM_Contig/Contig-U16482-1Q.Seq.d
         (721 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54MK8) RecName: Full=60S ribosomal protein L18a;                    348   1e-94
(Q02543) RecName: Full=60S ribosomal protein L18a;  &(Q3T003) Re...   203   5e-51
AK222647_1(AK222647|pid:none) Homo sapiens mRNA for ribosomal pr...   203   5e-51
(P62717) RecName: Full=60S ribosomal protein L18a;  &(P62718) Re...   201   1e-50
EF146275_1(EF146275|pid:none) Populus trichocarpa clone WS0116_L...   199   6e-50
EF144371_1(EF144371|pid:none) Populus trichocarpa clone PX0019_B...   199   7e-50
AY857432_1(AY857432|pid:none) Suberites domuncula L18a mRNA, com...   199   7e-50
EF145016_1(EF145016|pid:none) Populus trichocarpa clone WS0111_I...   199   9e-50
AJ009692_1(AJ009692|pid:none) Podocoryne carnea ribosomal protei...   198   1e-49
AM439004_1(AM439004|pid:none) Vitis vinifera contig VV78X089864....   197   2e-49
EU124968_1(EU124968|pid:none) Arenicola marina ribosomal protein...   197   3e-49
AK168258_1(AK168258|pid:none) Mus musculus CRL-1722 L5178Y-R cDN...   197   3e-49
(P51418) RecName: Full=60S ribosomal protein L18a-2;  &AC004077_...   197   3e-49
EZ000552_1(EZ000552|pid:none) TSA: Culex tarsalis Ctar-491 60S r...   196   5e-49
AY128411_1(AY128411|pid:none) Arabidopsis thaliana 60S ribosomal...   196   5e-49
AC146330_6(AC146330|pid:none) Medicago truncatula clone mth2-7g7...   196   6e-49
BC167567_1(BC167567|pid:none) Xenopus tropicalis hypothetical pr...   196   8e-49
BC053761_1(BC053761|pid:none) Xenopus laevis hypothetical protei...   196   8e-49
DQ235171_1(DQ235171|pid:none) Solanum tuberosum clone 155B02 unk...   195   1e-48
EF145564_1(EF145564|pid:none) Populus trichocarpa clone WS01126_...   195   1e-48
BT043673_1(BT043673|pid:none) Salmo salar clone HM5_1670 ribosom...   194   2e-48
BT049913_1(BT049913|pid:none) Salmo salar clone ssal-evd-507-105...   194   2e-48
DQ200390_1(DQ200390|pid:none) Solanum tuberosum clone 067G06 unk...   194   2e-48
BT058636_1(BT058636|pid:none) Salmo salar clone Contig2771 60S r...   194   2e-48
EU325863_1(EU325863|pid:none) Oncorhynchus masou formosanus ribo...   194   2e-48
(Q7ZWJ4) RecName: Full=60S ribosomal protein L18a;  &AL928834_1(...   194   2e-48
EU958803_1(EU958803|pid:none) Zea mays clone 207931 60S ribosoma...   193   4e-48
BT033854_1(BT033854|pid:none) Zea mays full-length cDNA clone ZM...   193   5e-48
EU957341_1(EU957341|pid:none) Zea mays clone 1589214 60S ribosom...   192   7e-48
(Q943F3) RecName: Full=60S ribosomal protein L18a;  &AP003237_19...   192   7e-48
AC124143_15(AC124143|pid:none) Oryza sativa (japonica cultivar-g...   192   1e-47
BT081846_1(BT081846|pid:none) Rana catesbeiana clone rcat-evr-52...   191   2e-47
BT063758_1(BT063758|pid:none) Zea mays full-length cDNA clone ZM...   191   2e-47
AB374954_1(AB374954|pid:none) Solea senegalensis RPL18a mRNA for...   191   2e-47
BC161335_1(BC161335|pid:none) Xenopus tropicalis hypothetical pr...   191   2e-47
AB490340_1(AB490340|pid:none) Polypedilum vanderplanki PvRpL18a ...   191   2e-47
(P41093) RecName: Full=60S ribosomal protein L18a;  &AE013599_26...   191   3e-47
(Q9LUD4) RecName: Full=60S ribosomal protein L18a-3;  &AB023038_...   189   1e-46
EU284877_1(EU284877|pid:none) TSA: Elaeis guineensis EgEfMPOB000...   188   1e-46
EU116901_1(EU116901|pid:none) Barentsia elongata putative riboso...   188   1e-46
CR380957_314(CR380957|pid:none) Candida glabrata strain CBS138 c...   188   1e-46
AC022455_5(AC022455|pid:none) Arabidopsis thaliana chromosome 1 ...   187   2e-46
FM992691_138(FM992691|pid:none) Candida dubliniensis CD36 chromo...   187   2e-46
AM269959_2(AM269959|pid:none) Aspergillus niger contig An01c0120...   187   2e-46
AY088351_1(AY088351|pid:none) Arabidopsis thaliana clone 5961 mR...   187   3e-46
EF070451_1(EF070451|pid:none) Maconellicoccus hirsutus clone WHM...   187   3e-46
AM049058_1(AM049058|pid:none) Georissus sp. APV-2005 mRNA for ri...   187   4e-46
EU975488_1(EU975488|pid:none) Zea mays clone 490792 60S ribosoma...   187   4e-46
AY961511_1(AY961511|pid:none) Lysiphlebus testaceipes ribosomal ...   186   5e-46
CR382132_1005(CR382132|pid:none) Yarrowia lipolytica strain CLIB...   186   5e-46
BT080352_1(BT080352|pid:none) Caligus clemensi clone ccle-evs-51...   186   5e-46
S56056(S56056) ribosomal protein L18a.e.c13, cytosolic - yeast  ...   186   5e-46
BC167657_1(BC167657|pid:none) Xenopus tropicalis cDNA clone IMAG...   186   5e-46
AE016819_563(AE016819|pid:none) Ashbya gossypii (= Eremothecium ...   186   8e-46
FN392321_49(FN392321|pid:none) Pichia pastoris GS115 chromosome ...   186   8e-46
FN322758_1(FN322758|pid:none) Schistosoma japonicum isolate Anhu...   185   1e-45
AL844509_401(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...   184   2e-45
DQ445539_1(DQ445539|pid:none) Graphocephala atropunctata isolate...   184   2e-45
AM910994_131(AM910994|pid:none) Plasmodium knowlesi strain H chr...   184   3e-45
AM980949_1(AM980949|pid:none) Brachionus plicatilis partial mRNA...   184   3e-45
EF660910_1(EF660910|pid:none) Artemia franciscana clone 18PN8.06...   184   3e-45
(Q8WQI7) RecName: Full=60S ribosomal protein L18a;  &AY072289_1(...   183   4e-45
DQ066261_1(DQ066261|pid:none) Ixodes scapularis isolate ISN-L-14...   183   4e-45
FN322753_1(FN322753|pid:none) Schistosoma japonicum isolate Anhu...   183   5e-45
AY769288_1(AY769288|pid:none) Bombyx mori ribosomal protein L18A...   182   9e-45
EU558366_1(EU558366|pid:none) Phoronis muelleri putative 60S rib...   182   9e-45
AP007155_756(AP007155|pid:none) Aspergillus oryzae RIB40 genomic...   180   5e-44
AF548319_1(AF548319|pid:none) Branchiostoma belcheri ribosomal p...   179   6e-44
(O44480) RecName: Full=60S ribosomal protein L18a;  &AF038611_9(...   179   6e-44
EF086490_1(EF086490|pid:none) Picea sitchensis clone WS02743_K01...   179   1e-43
EU781502_1(EU781502|pid:none) Caenorhabditis brenneri large ribo...   178   1e-43
(P05732) RecName: Full=60S ribosomal protein L20; AltName: Full=...   176   9e-43
AM920431_926(AM920431|pid:none) Penicillium chrysogenum Wisconsi...   175   1e-42
AY942835_1(AY942835|pid:none) Adineta ricciae ribosomal protein ...   170   4e-41
AE017350_153(AE017350|pid:none) Cryptococcus neoformans var. neo...   169   6e-41
CR940348_154(CR940348|pid:none) Theileria annulata strain Ankara...   168   2e-40
EZ000578_1(EZ000578|pid:none) TSA: Culex tarsalis Ctar-586 60S r...   168   2e-40
CP000587_17(CP000587|pid:none) Ostreococcus lucimarinus CCE9901 ...   166   7e-40
AK300809_1(AK300809|pid:none) Homo sapiens cDNA FLJ52166 complet...   165   1e-39
AM049060_1(AM049060|pid:none) Meladema coriacea partial mRNA for...   164   3e-39
AB009012_1(AB009012|pid:none) Schizosaccharomyces pombe mRNA for...   163   4e-39
CR382126_377(CR382126|pid:none) Kluyveromyces lactis strain NRRL...   158   2e-37
CU928180_636(CU928180|pid:none) Kluyveromyces thermotolerans str...   158   2e-37
CP000881_57(CP000881|pid:none) Hemiselmis andersenii chromosome ...   157   3e-37
AK317681_1(AK317681|pid:none) Arabidopsis thaliana AT3G14600 mRN...   155   1e-36
CR548612_28(CR548612|pid:none) Paramecium tetraurelia macronucle...   149   1e-34
CU633438_417(CU633438|pid:none) Podospora anserina genomic DNA c...   148   1e-34
EF138822_1(EF138822|pid:none) Saccharomyces cerevisiae RPL20Bp (...   146   7e-34
BC024609_1(BC024609|pid:none) Mus musculus ribosomal protein L18...   138   2e-31
EF585924_1(EF585924|pid:none) Sonneratia alba isolate Sonn526_1 ...   135   1e-30
S47353(S47353) ribosomal protein L18a, cytosolic - human  &X8082...   135   1e-30
EU125017_1(EU125017|pid:none) Eurythoe complanata ribosomal prot...   132   1e-29
EF138821_1(EF138821|pid:none) Saccharomyces cerevisiae RPL20Ap (...   129   1e-28
AM049057_1(AM049057|pid:none) Cicindela campestris partial mRNA ...   123   7e-27
BT064697_1(BT064697|pid:none) Zea mays full-length cDNA clone ZM...   122   1e-26
B88677(B88677) protein E04A4.8 [imported] - Caenorhabditis elega...   119   1e-25
FN366622_1(FN366622|pid:none) Schistosoma mansoni genome sequenc...   118   2e-25
AY167421_1(AY167421|pid:none) Cyprinus carpio ribosomal protein ...   116   6e-25
AL590448_60(AL590448|pid:none) chromosome VIII of strain GB-M1 o...   110   4e-23
DQ451165_1(DQ451165|pid:none) Marmota monax ribosomal protein L1...   109   8e-23
FM253353_1(FM253353|pid:none) Blattella germanica partial mRNA f...   108   2e-22
AM494969_97(AM494969|pid:none) Leishmania braziliensis chromosom...   104   2e-21
A90125(A90125) 60S ribosomal protein L18A [imported] - Guillardi...    99   2e-19
BC135797_1(BC135797|pid:none) Xenopus tropicalis hypothetical pr...    90   6e-17
EU968261_1(EU968261|pid:none) Zea mays clone 317826 unknown mRNA.      88   2e-16
AX885156_1(AX885156|pid:none) Sequence 1019 from Patent EP1033401.     82   1e-14
AY232187_1(AY232187|pid:none) Drosophila yakuba clone yak-ad_RpL...    74   4e-12
BT042342_1(BT042342|pid:none) Zea mays full-length cDNA clone ZM...    67   4e-10
AX885148_1(AX885148|pid:none) Sequence 1011 from Patent EP103340...    59   2e-07
AX885153_1(AX885153|pid:none) Sequence 1016 from Patent EP1033401.     57   8e-07
BT084871_1(BT084871|pid:none) Zea mays full-length cDNA clone ZM...    49   2e-04
S10051(S10051)ribosomal protein L18a.e - fission yeast  (Schizos...    48   3e-04
AX885155_1(AX885155|pid:none) Sequence 1018 from Patent EP1033401.     45   0.002
EU954959_1(EU954959|pid:none) Zea mays clone 1495984 unknown mRNA.     44   0.004
EU960349_1(EU960349|pid:none) Zea mays clone 224025 unknown mRNA.      42   0.025
CP000270_1868(CP000270|pid:none) Burkholderia xenovorans LB400 c...    37   0.48
(A9A8N2) RecName: Full=50S ribosomal protein LX;  &CP000867_879(...    35   1.8
AC159872_15(AC159872|pid:none) Medicago truncatula clone mth2-29...    34   4.0
FJ693683_1(FJ693683|pid:none) Turkey astrovirus 2 isolate TK/MN/...    34   4.0
(A6VI47) RecName: Full=50S ribosomal protein LX;  &CP000745_1050...    34   4.0
CP001357_1457(CP001357|pid:none) Brachyspira hyodysenteriae WA1,...    34   4.0
FJ693660_1(FJ693660|pid:none) Turkey astrovirus 2 isolate TK/MN/...    33   9.0
AB107985_8(AB107985|pid:none) Legionella pneumophila DNA, partia...    33   9.0
CR628337_2096(CR628337|pid:none) Legionella pneumophila str. Len...    33   9.0

>(Q54MK8) RecName: Full=60S ribosomal protein L18a;
          Length = 171

 Score =  348 bits (892), Expect = 1e-94
 Identities = 171/171 (100%), Positives = 171/171 (100%)
 Frame = +2

Query: 59  MPIHEFQVVGRHVPTERDANPKIYRMRLFAQTSIHAKSRFWYFLSKIVKMKKSTGEILNV 238
           MPIHEFQVVGRHVPTERDANPKIYRMRLFAQTSIHAKSRFWYFLSKIVKMKKSTGEILNV
Sbjct: 1   MPIHEFQVVGRHVPTERDANPKIYRMRLFAQTSIHAKSRFWYFLSKIVKMKKSTGEILNV 60

Query: 239 TEIFEDKPQKVKNFGVFIRYNSRSGTHNIYKEYRDLTRCGAVSQMYDEMASRHSARESSI 418
           TEIFEDKPQKVKNFGVFIRYNSRSGTHNIYKEYRDLTRCGAVSQMYDEMASRHSARESSI
Sbjct: 61  TEIFEDKPQKVKNFGVFIRYNSRSGTHNIYKEYRDLTRCGAVSQMYDEMASRHSARESSI 120

Query: 419 HIIDIKEIAASLTRRANTKQFHDSKIKFPLTHRIAKSKSTFVANRPNTFFC 571
           HIIDIKEIAASLTRRANTKQFHDSKIKFPLTHRIAKSKSTFVANRPNTFFC
Sbjct: 121 HIIDIKEIAASLTRRANTKQFHDSKIKFPLTHRIAKSKSTFVANRPNTFFC 171

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,143,151,978
Number of extensions: 22542630
Number of successful extensions: 48071
Number of sequences better than 10.0: 124
Number of HSP's gapped: 48016
Number of HSP's successfully gapped: 126
Length of query: 240
Length of database: 1,061,185,681
Length adjustment: 125
Effective length of query: 115
Effective length of database: 652,629,681
Effective search space: 75052413315
Effective search space used: 75052413315
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
PSORT 

 psg: 0.68  gvh: 0.38  alm: 0.52  top: 0.53  tms: 0.00  mit: 0.26  mip: 0.02
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 28.0 %: mitochondrial
	 16.0 %: nuclear
	  8.0 %: cytoskeletal
	  4.0 %: peroxisomal

>> prediction for Contig-U16482-1 is cyt
VS (DIR, S) 38
VH (FL, L) 0
VF (FL, S) 6
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 3
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 8
FC-IC (SUB) 2