Contig-U03315-1
Contig ID Contig-U03315-1
Contig update 2002. 9.13
Contig sequence
>Contig-U03315-1 (Contig-U03315-1Q) /CSM_Contig/Contig-U03315-1Q.Seq.d
CAAGCTGCAAAAAAAGTAATTGTAAGAGAGAAACCAATCTTAGTAAGATT
AAAGTTAATAATAGGTGCCGGAACAGCGTCGATGACACCACCATTGGGAC
CTAATTTAGGGCAATATGGAATAAATAGTATTGAATTTTTTAATGATTTT
AATACAGAAACAAAAGAATTATTTGAAACAGGATTAGCATTAAGAGTGAT
CCTATGGATAAATGTAATGAAAGCATTTTATTTTGAGCTACAAATGCCCA
AAATAAGTAATTTATTAAAGGAATATTATAAAGTAGAATGTGAAGCCGCG
AAAGGTGGTAATGTGTATATAGAAAAAGAACGATTATTAAAAGATTGTTT
TAAAATCGCAATATTACTGTGTACCTTTAATAAAGCAGAAAAACAGTGGG
AACAAATTGAAAAAAAATATTTGAGAATAACCGTCTTAGAAATCTTAGGA
ACATGTAGATCCTGTAAAATATACGTAAAAAAAGCAGAGAATGAATAAGC
AAAAATTGACTCAAAAATTAGAGAATTATAAAAAACAACAACAAGAAATC
ACAAAATGTTTTCAACAAGAAGGACCTATCTTTATAGGTCAATTATTAGC
TTTAAATGGTTCAGATTATAATAAATTTCGAAAGTATGCTATAGAACATA
ATGTTCAAATTATTCATGTTAATGCTAATCAAGTAAAAACTATATTTGGT
AGTGTAAAACCATTAGAAGTGAATAATACAATGATAATTGTAAAAGCCCC
TACATTAGCAGTATTTAATGAAGTGCTAGAATATATACATCAGTATAAAG
AACAAATATTACCATTACAAATTTTAGTAAATGATGAAGGACAAAGCAAA
ACAAATAGCACATCTTTAAAAAGGGATGGATCTTATAGAGTAATAAGAGA
AGCGAACTATTTAGAATATAAAAAAGCAATGAAGGTACAAGGCACAACAA
AAGAAGAAGCTTTAAAAACATTTACAAAAATGTTACAAATAACGATATTA
TTACAAAACATAAAATTATTAAAATTATTAAANATTACAATAAATCAAAT
AACGGNATAGAAAAGCCAGAG

Gap no gap
Contig length 1071
Chromosome number (1..6, M) M
Chromosome length 55569
Start point 33063
End point 34135
Strand (PLUS/MINUS) PLUS
Number of clones 3
Number of EST 2
Link to clone list U03315
List of clone(s)

est1=VSD533E,1,1072
est2=FC-IC0153F,373,804
Translated Amino Acid sequence
klqkk*l*ernqs**d*s***vpeqrr*hhhwdli*gnme*ivlnflmiliqkqknylkq
d*h*e*syg*m**khfilsykcpk*viy*rniik*nvkprkvvmci*kkndy*kivlksq
yycvplikqknsgnklkkni*e*ps*ks*ehvdpvkyt*KKQRMNKQKLTQKLENYKKQQ
QEITKCFQQEGPIFIGQLLALNGSDYNKFRKYAIEHNVQIIHVNANQVKTIFGSVKPLEV
NNTMIIVKAPTLAVFNEVLEYIHQYKEQILPLQILVNDEGQSKTNSTSLKRDGSYRVIRE
ANYLEYKKAMKVQGTTKEEALKTFTKMLQITILLQNIKLLKLLXITINQITX*ksq


Translated Amino Acid sequence (All Frames)
Frame A:
qaakkvivrekpilvrlkliigagtasmtpplgpnlgqyginsieffndfntetkelfet
glalrvilwinvmkafyfelqmpkisnllkeyykveceaakggnvyiekerllkdcfkia
illctfnkaekqweqiekkylritvleilgtcrsckiyvkkaene*akidskirel*ktt
trnhkmfstrrtylyrsiisfkwfrl**iskvcyrt*csnysc*c*ssknyiw*cktirs
e*yndnckspyissi**sariytsv*rtnititnfsk**rtkqnk*hifkkgwil*snkr
selfri*ksnegtrhnkrrsfkniyknvtnndiitkhkiikiikxynksnngiekpe


Frame B:
klqkk*l*ernqs**d*s***vpeqrr*hhhwdli*gnme*ivlnflmiliqkqknylkq
d*h*e*syg*m**khfilsykcpk*viy*rniik*nvkprkvvmci*kkndy*kivlksq
yycvplikqknsgnklkkni*e*ps*ks*ehvdpvkyt*KKQRMNKQKLTQKLENYKKQQ
QEITKCFQQEGPIFIGQLLALNGSDYNKFRKYAIEHNVQIIHVNANQVKTIFGSVKPLEV
NNTMIIVKAPTLAVFNEVLEYIHQYKEQILPLQILVNDEGQSKTNSTSLKRDGSYRVIRE
ANYLEYKKAMKVQGTTKEEALKTFTKMLQITILLQNIKLLKLLXITINQITX*ksq


Frame C:
sckksnckretnlskikvnnrcrnsvddttigt*fraiwnk*y*if**f*yrnkrii*nr
isiksdpmdkcnesilf*atnaqnk*fikgil*srm*srerw*cvyrkrtiikrlf*nrn
itvyl**srktvgtn*kkifennrlrnlrnm*il*nirkksre*iskn*lkn*riiknnn
kksqnvfnkkdlsl*vny*l*mvqiiinfesml*nimfklfmlmlik*klylvv*nh*k*
iiq**l*kplh*qylmkc*niyisiknkyyhykf**mmkdkakqiahl*kgmdlie**ek
rti*nikkq*rykaqqkkkl*khlqkcyk*ryyykt*ny*ny*xlq*ik*rxrkar


own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U03315-1 (Contig-U03315-1Q)
/CSM_Contig/Contig-U03315-1Q.Seq.d
(1071 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U03315-1 (Contig-U03315-1Q) /CSM_Contig/Conti... 1786 0.0
Contig-U10238-1 (Contig-U10238-1Q) /CSM_Contig/Conti... 54 3e-07
Contig-U13350-1 (Contig-U13350-1Q) /CSM_Contig/Conti... 36 0.076
Contig-U12581-1 (Contig-U12581-1Q) /CSM_Contig/Conti... 36 0.076
Contig-U11908-1 (Contig-U11908-1Q) /CSM_Contig/Conti... 36 0.076
Contig-U10123-1 (Contig-U10123-1Q) /CSM_Contig/Conti... 36 0.076
Contig-U14467-1 (Contig-U14467-1Q) /CSM_Contig/Conti... 34 0.30
Contig-U14313-1 (Contig-U14313-1Q) /CSM_Contig/Conti... 34 0.30
Contig-U13295-1 (Contig-U13295-1Q) /CSM_Contig/Conti... 34 0.30
Contig-U13284-1 (Contig-U13284-1Q) /CSM_Contig/Conti... 34 0.30

>Contig-U03315-1 (Contig-U03315-1Q) /CSM_Contig/Contig-U03315-1Q.Seq.d
Length = 1071

Score = 1786 bits (901), Expect = 0.0
Identities = 931/946 (98%)
Strand = Plus / Plus


Query: 16 gtaattgtaagagagaaaccaatcttagtaagattaaagttaataataggtgccggaaca 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 gtaattgtaagagagaaaccaatcttagtaagattaaagttaataataggtgccggaaca 75


Query: 76 gcgtcgatgacaccaccattgggacctaatttagggcaatatggaataaatagtattgaa 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 gcgtcgatgacaccaccattgggacctaatttagggcaatatggaataaatagtattgaa 135


Query: 136 ttttttaatgattttaatacagaaacaaaagaattatttgaaacaggattagcattaaga 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 ttttttaatgattttaatacagaaacaaaagaattatttgaaacaggattagcattaaga 195


Query: 196 gtgatcctatggataaatgtaatgaaagcattttattttgagctacaaatgcccaaaata 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gtgatcctatggataaatgtaatgaaagcattttattttgagctacaaatgcccaaaata 255


Query: 256 agtaatttattaaaggaatattataaagtagaatgtgaagccgcgaaaggtggtaatgtg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agtaatttattaaaggaatattataaagtagaatgtgaagccgcgaaaggtggtaatgtg 315


Query: 316 tatatagaaaaagaacgattattaaaagattgttttaaaatcgcaatattactgtgtacc 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tatatagaaaaagaacgattattaaaagattgttttaaaatcgcaatattactgtgtacc 375


Query: 376 tttaataaagcagaaaaacagtgggaacaaattgnnnnnnnntatttgagaataaccgtc 435
|||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 376 tttaataaagcagaaaaacagtgggaacaaattgaaaaaaaatatttgagaataaccgtc 435


Query: 436 ttagaaatcttaggaacatgtagatcctgtaaaatatacgtnnnnnnngcagagaatgaa 495
||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 436 ttagaaatcttaggaacatgtagatcctgtaaaatatacgtaaaaaaagcagagaatgaa 495


Query: 496 taagcaaaaattgactcaaaaattagagaattataaaaaacaacaacaagaaatcacaaa 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 taagcaaaaattgactcaaaaattagagaattataaaaaacaacaacaagaaatcacaaa 555


Query: 556 atgttttcaacaagaaggacctatctttataggtcaattattagctttaaatggttcaga 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 atgttttcaacaagaaggacctatctttataggtcaattattagctttaaatggttcaga 615


Query: 616 ttataataaatttcgaaagtatgctatagaacataatgttcaaattattcatgttaatgc 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ttataataaatttcgaaagtatgctatagaacataatgttcaaattattcatgttaatgc 675


Query: 676 taatcaagtaaaaactatatttggtagtgtaaaaccattagaagtgaataatacaatgat 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 taatcaagtaaaaactatatttggtagtgtaaaaccattagaagtgaataatacaatgat 735


Query: 736 aattgtaaaagcccctacattagcagtatttaatgaagtgctagaatatatacatcagta 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 aattgtaaaagcccctacattagcagtatttaatgaagtgctagaatatatacatcagta 795


Query: 796 taaagaacaaatattaccattacaaattttagtaaatgatgaaggacaaagcaaaacaaa 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 taaagaacaaatattaccattacaaattttagtaaatgatgaaggacaaagcaaaacaaa 855


Query: 856 tagcacatctttaaaaagggatggatcttatagagtaataagagaagcgaactatttaga 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 tagcacatctttaaaaagggatggatcttatagagtaataagagaagcgaactatttaga 915


Query: 916 atataaaaaagcaatgaaggtacaaggcacaacaaaagaagaagct 961
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 atataaaaaagcaatgaaggtacaaggcacaacaaaagaagaagct 961


Score = 32.2 bits (16), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 1053 cggnatagaaaagccagag 1071
|||||||||||||||||||
Sbjct: 1053 cggnatagaaaagccagag 1071


>Contig-U10238-1 (Contig-U10238-1Q) /CSM_Contig/Contig-U10238-1Q.Seq.d
Length = 1096

Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus


Query: 935 gtacaaggcacaacaaaagaagaagct 961
|||||||||||||||||||||||||||
Sbjct: 389 gtacaaggcacaacaaaagaagaagct 415


Score = 30.2 bits (15), Expect = 4.7
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1057 atagaaaagccagag 1071
|||||||||||||||
Sbjct: 511 atagaaaagccagag 525


>Contig-U13350-1 (Contig-U13350-1Q) /CSM_Contig/Contig-U13350-1Q.Seq.d
Length = 334

Score = 36.2 bits (18), Expect = 0.076
Identities = 18/18 (100%)
Strand = Plus / Minus


Query: 135 attttttaatgattttaa 152
||||||||||||||||||
Sbjct: 226 attttttaatgattttaa 209


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 19,031
Number of Sequences: 6905
Number of extensions: 19031
Number of successful extensions: 1699
Number of sequences better than 10.0: 203
length of query: 1071
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1055
effective length of database: 5,564,391
effective search space: 5870432505
effective search space used: 5870432505
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5.31
Homology vs DNA
Query= Contig-U03315-1 (Contig-U03315-1Q) /CSM_Contig/Contig-U03315-1Q.Seq.d
(1071 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(D21196) Dictyostelium discoideum mitochondrial DNA. 801 0.0 4
(AB000109) Dictyostelium discoideum mitochondrial DNA, compl... 801 0.0 4
(AU264191) Dictyostelium discoideum vegetative cDNA clone:VS... 781 0.0 3
(AU264192) Dictyostelium discoideum vegetative cDNA clone:VS... 801 0.0 3
(AU271378) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 250 e-145 5
(DQ336395) Dictyostelium citrinum mitochondrion, complete ge... 347 e-123 3
(AY700145) Polysphondylium pallidum mitochondrion DNA, compl... 66 5e-07 6
(EU275726) Polysphondylium pallidum strain PN500 mitochondri... 62 7e-07 3
(AU261718) Dictyostelium discoideum vegetative cDNA clone:VS... 54 2e-04 2
(AU262910) Dictyostelium discoideum vegetative cDNA clone:VS... 54 0.011 1
(CP000728) Clostridium botulinum F str. Langeland, complete ... 36 0.096 20
(AC162554) Bos taurus clone CH240-121J20, WORKING DRAFT SEQU... 50 0.18 1
(AC172687) Bos taurus clone CH240-230G16, WORKING DRAFT SEQU... 50 0.18 1
(EK511241) 1095515479973 Global-Ocean-Sampling_GS-32-01-01-1... 44 0.19 2
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 38 0.29 9
(CP000939) Clostridium botulinum B1 str. Okra, complete genome. 36 0.45 18
(EK407455) 1095505085188 Global-Ocean-Sampling_GS-31-01-01-1... 42 0.68 2
(FF564587) TT1BC76TV Tetrahymena thermophila SB210 cDNA libr... 42 0.69 2
(AL355274) Human DNA sequence from clone RP11-87P4 on chromo... 48 0.70 1
(AL360019) Human DNA sequence *** SEQUENCING CANCELLED *** f... 48 0.70 1
(AC168843) Strongylocentrotus purpuratus clone R3-13A7, WORK... 48 0.70 1
(AM653231) Entamoeba moshkovskii FIC GSS, clone mosh127d05.q1k. 48 0.70 1
(CP001147) Thermodesulfovibrio yellowstonii DSM 11347, compl... 48 0.70 1
(AL954666) Zebrafish DNA sequence from clone CH211-81I19 in ... 34 0.75 8
(BA000016) Clostridium perfringens str. 13 DNA, complete gen... 36 0.77 20
(CP000963) Clostridium botulinum A3 str. Loch Maree plasmid ... 34 0.79 11
(AL359551) Human DNA sequence from clone RP11-371I1 on chrom... 46 1.1 2
(AC018658) Homo sapiens chromosome 12 clone RP11-100N11, WOR... 42 1.4 4
(CP000246) Clostridium perfringens ATCC 13124, complete genome. 36 1.8 20
(AX345893) Sequence 964 from Patent WO0200928. 40 2.3 3
(AC079035) Homo sapiens 12 BAC RP11-863H1 (Roswell Park Canc... 42 2.6 5
(EF421334) Entamoeba terrapinae strain M tRNA array unit TX ... 46 2.8 1
(DQ384467) Homo sapiens clone fa0943 genomic sequence. 46 2.8 1
(DQ384463) Homo sapiens clone fa0558 genomic sequence. 46 2.8 1
(AC073215) Homo sapiens BAC clone RP11-501L9 from 2, complet... 46 2.8 1
(AC136961) Rattus norvegicus clone CH230-159O2, WORKING DRAF... 46 2.8 1
(AC120277) Rattus norvegicus clone CH230-171B18, *** SEQUENC... 46 2.8 1
(AC013329) Homo sapiens chromosome 2 clone RP11-422B1 map 2,... 46 2.8 1
(ER424955) 1092963742682 Global-Ocean-Sampling_GS-35-01-01-1... 46 2.8 1
(AM672817) Entamoeba terrapinae GSS, clone terra245a02.q1k. 46 2.8 1
(AM672346) Entamoeba terrapinae GSS, clone terra234h01.q1k. 46 2.8 1
(AM672345) Entamoeba terrapinae GSS, clone terra234h01.p1k. 46 2.8 1
(AM672226) Entamoeba terrapinae GSS, clone terra234b10.q1k. 46 2.8 1
(AM672225) Entamoeba terrapinae GSS, clone terra234b10.p1k. 46 2.8 1
(AM672030) Entamoeba terrapinae GSS, clone terra233a08.p1k. 46 2.8 1
(AM671926) Entamoeba terrapinae GSS, clone terra231h10.q1k. 46 2.8 1
(AM665404) Entamoeba terrapinae GSS, clone terra007a12.q1k. 46 2.8 1
(AM665403) Entamoeba terrapinae GSS, clone terra007a12.p1k. 46 2.8 1
(EJ415148) 1093012176593 Global-Ocean-Sampling_GS-28-01-01-1... 46 2.8 1
(EJ122216) 1092343378318 Global-Ocean-Sampling_GS-27-01-01-1... 46 2.8 1
(CC087052) CSU-K33r.4O14.T7 CSU-K33r Aedes aegypti genomic c... 46 2.8 1
(BJ871959) Marchantia polymorpha cDNA clone:lwb6m19, 5' end. 46 2.8 1
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome. 46 2.8 1
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 34 4.4 2
(AM431479) Vitis vinifera contig VV78X251568.2, whole genome... 38 4.7 3
(AC111138) Mus musculus chromosome 12 clone RP23-364J12 map ... 34 5.1 2
(AC162910) Mus musculus BAC clone RP24-322O3 from chromosome... 34 5.2 2
(BX963293) Reverse strand read from insert in 5'HPRT inserti... 38 7.1 2
(AZ036259) RPCI-23-364J12.TV RPCI-23 Mus musculus genomic cl... 34 7.2 2
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 36 7.5 19
(AZ256825) RPCI-23-112C16.TV RPCI-23 Mus musculus genomic cl... 38 7.9 2
(BU633009) UI-H-FL1-bgt-a-03-0-UI.s1 NCI_CGAP_FL1 Homo sapie... 38 7.9 2
(EK540425) 1095516056064 Global-Ocean-Sampling_GS-32-01-01-1... 42 8.9 2
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)... 30 9.0 17
(EY305284) CAWX19283.fwd CAWX Helobdella robusta Primary Ear... 40 9.8 2

>(D21196) Dictyostelium discoideum mitochondrial DNA.
Length = 11779

Score = 801 bits (404), Expect(4) = 0.0
Identities = 404/404 (100%)
Strand = Plus / Plus


Query: 558 gttttcaacaagaaggacctatctttataggtcaattattagctttaaatggttcagatt 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2841 gttttcaacaagaaggacctatctttataggtcaattattagctttaaatggttcagatt 2900


Query: 618 ataataaatttcgaaagtatgctatagaacataatgttcaaattattcatgttaatgcta 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2901 ataataaatttcgaaagtatgctatagaacataatgttcaaattattcatgttaatgcta 2960


Query: 678 atcaagtaaaaactatatttggtagtgtaaaaccattagaagtgaataatacaatgataa 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2961 atcaagtaaaaactatatttggtagtgtaaaaccattagaagtgaataatacaatgataa 3020


Query: 738 ttgtaaaagcccctacattagcagtatttaatgaagtgctagaatatatacatcagtata 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3021 ttgtaaaagcccctacattagcagtatttaatgaagtgctagaatatatacatcagtata 3080


Query: 798 aagaacaaatattaccattacaaattttagtaaatgatgaaggacaaagcaaaacaaata 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3081 aagaacaaatattaccattacaaattttagtaaatgatgaaggacaaagcaaaacaaata 3140


Query: 858 gcacatctttaaaaagggatggatcttatagagtaataagagaagcgaactatttagaat 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3141 gcacatctttaaaaagggatggatcttatagagtaataagagaagcgaactatttagaat 3200


Query: 918 ataaaaaagcaatgaaggtacaaggcacaacaaaagaagaagct 961
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3201 ataaaaaagcaatgaaggtacaaggcacaacaaaagaagaagct 3244

Score = 781 bits (394), Expect(4) = 0.0
Identities = 394/394 (100%)
Strand = Plus / Plus


Query: 16 gtaattgtaagagagaaaccaatcttagtaagattaaagttaataataggtgccggaaca 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2299 gtaattgtaagagagaaaccaatcttagtaagattaaagttaataataggtgccggaaca 2358


Query: 76 gcgtcgatgacaccaccattgggacctaatttagggcaatatggaataaatagtattgaa 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2359 gcgtcgatgacaccaccattgggacctaatttagggcaatatggaataaatagtattgaa 2418


Query: 136 ttttttaatgattttaatacagaaacaaaagaattatttgaaacaggattagcattaaga 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2419 ttttttaatgattttaatacagaaacaaaagaattatttgaaacaggattagcattaaga 2478


Query: 196 gtgatcctatggataaatgtaatgaaagcattttattttgagctacaaatgcccaaaata 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2479 gtgatcctatggataaatgtaatgaaagcattttattttgagctacaaatgcccaaaata 2538


Query: 256 agtaatttattaaaggaatattataaagtagaatgtgaagccgcgaaaggtggtaatgtg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2539 agtaatttattaaaggaatattataaagtagaatgtgaagccgcgaaaggtggtaatgtg 2598


Query: 316 tatatagaaaaagaacgattattaaaagattgttttaaaatcgcaatattactgtgtacc 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2599 tatatagaaaaagaacgattattaaaagattgttttaaaatcgcaatattactgtgtacc 2658


Query: 376 tttaataaagcagaaaaacagtgggaacaaattg 409
||||||||||||||||||||||||||||||||||
Sbjct: 2659 tttaataaagcagaaaaacagtgggaacaaattg 2692

Score = 109 bits (55), Expect(4) = 0.0
Identities = 58/59 (98%)
Strand = Plus / Plus


Query: 418 tatttgagaataaccgtcttagaaatcttaggaacatgtagatcctgtaaaatatacgt 476
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 tatttaagaataaccgtcttagaaatcttaggaacatgtagatcctgtaaaatatacgt 2759

Score = 30.2 bits (15), Expect(4) = 0.0
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1057 atagaaaagccagag 1071
|||||||||||||||
Sbjct: 3340 atagaaaagccagag 3354

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,209,777,025
Number of extensions: 73204427
Number of successful extensions: 6042632
Number of sequences better than 10.0: 65
Length of query: 1071
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1047
Effective length of database: 99,340,224,878
Effective search space: 104009215447266
Effective search space used: 104009215447266
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.27
Homology vs Protein
Query= Contig-U03315-1 (Contig-U03315-1Q) /CSM_Contig/Contig-U03315-1Q.Seq.d
(1071 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q23884) RecName: Full=60S ribosomal protein L11, mitochondrial;... 332 2e-89
(Q23885) RecName: Full=Uncharacterized mitochondrial protein 21;... 325 1e-87
DQ336395_30(DQ336395|pid:none) Dictyostelium citrinum mitochondr... 306 8e-82
EU275726_26(EU275726|pid:none) Polysphondylium pallidum strain P... 176 2e-42
(Q92QI1) RecName: Full=50S ribosomal protein L11; &AL591688_134... 66 2e-09
(A1USC4) RecName: Full=50S ribosomal protein L11; &CP000524_538... 65 4e-09
CP001389_1156(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 65 4e-09
(A6U847) RecName: Full=50S ribosomal protein L11; &CP000738_967... 65 4e-09
(A8EVZ8) RecName: Full=50S ribosomal protein L11; &CP000361_183... 65 5e-09
(Q98N70) RecName: Full=50S ribosomal protein L11; &BA000012_211... 65 5e-09
(Q2K9M8) RecName: Full=50S ribosomal protein L11; &CP000133_163... 64 7e-09
FN392319_106(FN392319|pid:none) Pichia pastoris GS115 chromosome... 64 7e-09
(B5ZYS3) RecName: Full=50S ribosomal protein L11; &(Q1MIF4) Rec... 64 7e-09
(B3PW55) RecName: Full=50S ribosomal protein L11; &CP001074_170... 64 7e-09
(Q89B16) RecName: Full=50S ribosomal protein L11; &AE016826_38(... 64 7e-09
(Q6FZL5) RecName: Full=50S ribosomal protein L11; &BX897700_698... 64 7e-09
CP001562_611(CP001562|pid:none) Bartonella grahamii as4aup, comp... 64 9e-09
AM494475_212(AM494475|pid:none) Orientia tsutsugamushi Boryong c... 64 9e-09
(A9ISE8) RecName: Full=50S ribosomal protein L11; &AM260525_789... 64 9e-09
AP008981_1798(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 64 9e-09
(Q6G3X9) RecName: Full=50S ribosomal protein L11; &BX897699_593... 64 9e-09
CR380956_487(CR380956|pid:none) Candida glabrata strain CBS138 c... 64 1e-08
BC088796_1(BC088796|pid:none) Xenopus laevis hypothetical LOC496... 63 2e-08
AE017342_189(AE017342|pid:none) Cryptococcus neoformans var. neo... 63 2e-08
(B1Y7H7) RecName: Full=50S ribosomal protein L11; &CP001013_384... 63 2e-08
(A2SLG9) RecName: Full=50S ribosomal protein L11; &CP000555_344... 63 2e-08
(A1B011) RecName: Full=50S ribosomal protein L11; &CP000489_738... 63 2e-08
AM270401_32(AM270401|pid:none) Aspergillus niger contig An18c008... 63 2e-08
(B2IK51) RecName: Full=50S ribosomal protein L11; &CP001016_132... 63 2e-08
CP001622_1398(CP001622|pid:none) Rhizobium leguminosarum bv. tri... 63 2e-08
(B4UDT6) RecName: Full=50S ribosomal protein L11; &(Q2II82) Rec... 63 2e-08
(B6YQ01) RecName: Full=50S ribosomal protein L11; &AP010656_10(... 63 2e-08
(B4U733) RecName: Full=50S ribosomal protein L11; &CP001130_252... 63 2e-08
(B2JIH8) RecName: Full=50S ribosomal protein L11; 63 2e-08
CP000803_1418(CP000803|pid:none) Francisella tularensis subsp. h... 63 2e-08
CP000916_219(CP000916|pid:none) Thermotoga neapolitana DSM 4359,... 63 2e-08
(A7NEC4) RecName: Full=50S ribosomal protein L11; &(Q0BKC0) Rec... 63 2e-08
(B6JER5) RecName: Full=50S ribosomal protein L11; &CP001196_163... 63 2e-08
(Q65W46) RecName: Full=50S ribosomal protein L11; &AE016827_207... 63 2e-08
CP000496_303(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 62 3e-08
(A4XLK2) RecName: Full=50S ribosomal protein L11; &CP000679_212... 62 3e-08
(A0KQA9) RecName: Full=50S ribosomal protein L11; &(A4SHU5) Rec... 62 3e-08
(A5F3P1) RecName: Full=50S ribosomal protein L11; &(Q9KV34) Rec... 62 3e-08
(P53875) RecName: Full=54S ribosomal protein L19, mitochondrial;... 62 3e-08
(A0Q871) RecName: Full=50S ribosomal protein L11; &(A4IW95) Rec... 62 3e-08
CP001230_1160(CP001230|pid:none) Persephonella marina EX-H1, com... 62 3e-08
(Q5NPL1) RecName: Full=50S ribosomal protein L11; &AE008692_725... 62 3e-08
AP007166_260(AP007166|pid:none) Aspergillus oryzae RIB40 genomic... 62 3e-08
(B5Y934) RecName: Full=50S ribosomal protein L11; &CP001145_909... 62 3e-08
(Q1D7U7) RecName: Full=50S ribosomal protein L11; &CP000113_299... 62 3e-08
(A0LII0) RecName: Full=50S ribosomal protein L11; &CP000478_152... 62 3e-08
AB055152_1(AB055152|pid:none) Triticum aestivum mrpl11 mRNA for ... 62 3e-08
AY775003_1(AY775003|pid:none) Synthetic construct Francisella tu... 62 3e-08
(A8HTX5) RecName: Full=50S ribosomal protein L11; &AP009384_883... 62 3e-08
AC022457_9(AC022457|pid:none) Oryza sativa chromosome 10 BAC OSJ... 62 3e-08
(Q47UV5) RecName: Full=50S ribosomal protein L11; &CP000083_463... 62 5e-08
(Q07KJ7) RecName: Full=50S ribosomal protein L11; &CP000463_357... 62 5e-08
(A1TVT4) RecName: Full=50S ribosomal protein L11; &CP000512_445... 62 5e-08
(B2T763) RecName: Full=50S ribosomal protein L11; &CP001052_359... 62 5e-08
GM694616_1(GM694616|pid:none) Sequence 172 from Patent EP1953235. 62 5e-08
AF176664_15(AF176664|pid:none) EDTA-degrading bacterium BNC1 EDT... 61 6e-08
(A9KD43) RecName: Full=50S ribosomal protein L11; &CP000733_169... 61 6e-08
(Q134R3) RecName: Full=50S ribosomal protein L11; &CP000283_318... 61 6e-08
CP000252_289(CP000252|pid:none) Syntrophus aciditrophicus SB, co... 61 6e-08
CP001655_3795(CP001655|pid:none) Dickeya zeae Ech1591, complete ... 61 6e-08
CP001616_2750(CP001616|pid:none) Tolumonas auensis DSM 9187, com... 61 6e-08
(Q89J69) RecName: Full=50S ribosomal protein L11; &BA000040_541... 61 6e-08
(B3QC05) RecName: Full=50S ribosomal protein L11; &(P62441) Rec... 61 6e-08
(A4WVM0) RecName: Full=50S ribosomal protein L11; &CP000661_252... 61 8e-08
CU928175_402(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 61 8e-08
(Q089R5) RecName: Full=50S ribosomal protein L11; &CP000447_137... 61 8e-08
(A3DIZ0) RecName: Full=50S ribosomal protein L11; &CP000568_267... 61 8e-08
(A4SUV0) RecName: Full=50S ribosomal protein L11; &CP000655_42(... 61 8e-08
(B1XSE8) RecName: Full=50S ribosomal protein L11; &CP001010_35(... 61 8e-08
(A5EX74) RecName: Full=50S ribosomal protein L11; &CP000513_122... 61 8e-08
(A8G1F9) RecName: Full=50S ribosomal protein L11; &CP000821_431... 61 8e-08
(A3Q971) RecName: Full=50S ribosomal protein L11; &CP000606_146... 61 8e-08
(A1V8B6) RecName: Full=50S ribosomal protein L11; &(A2S7G2) Rec... 61 8e-08
(A5ELP2) RecName: Full=50S ribosomal protein L11; &CP000494_478... 61 8e-08
CR954202_639(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 61 8e-08
CP001635_584(CP001635|pid:none) Variovorax paradoxus S110 chromo... 61 8e-08
AY372455_16(AY372455|pid:none) Uncultured marine alpha proteobac... 61 8e-08
CP001654_3671(CP001654|pid:none) Dickeya dadantii Ech703, comple... 60 1e-07
(A4YSH5) RecName: Full=50S ribosomal protein L11; &CU234118_287... 60 1e-07
(A8GMA3) RecName: Full=50S ribosomal protein L11; &CP000847_191... 60 1e-07
(Q1R0I6) RecName: Full=50S ribosomal protein L11; &CP000285_407... 60 1e-07
BX842654_109(BX842654|pid:none) Bdellovibrio bacteriovorus compl... 60 1e-07
CR382130_887(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 60 1e-07
(A8F4F6) RecName: Full=50S ribosomal protein L11; &CP000812_467... 60 1e-07
(Q30X10) RecName: Full=50S ribosomal protein L11; &CP000112_298... 60 1e-07
(A8GYW5) RecName: Full=50S ribosomal protein L11; &(B1KMZ4) Rec... 60 1e-07
BC072251_1(BC072251|pid:none) Xenopus laevis hypothetical protei... 60 1e-07
(B0UUZ4) RecName: Full=50S ribosomal protein L11; &(Q0I0V2) Rec... 60 1e-07
(A1WVD3) RecName: Full=50S ribosomal protein L11; &CP000544_850... 60 1e-07
EF107102_6(EF107102|pid:none) Uncultured marine bacterium HF10_1... 60 1e-07
CR382124_345(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 60 1e-07
FM992688_628(FM992688|pid:none) Candida dubliniensis CD36 chromo... 60 1e-07
AY552545_66(AY552545|pid:none) Uncultured marine gamma proteobac... 60 1e-07
AY372454_17(AY372454|pid:none) Uncultured marine gamma proteobac... 60 1e-07
(A3N316) RecName: Full=50S ribosomal protein L11; &(B3GYU4) Rec... 60 1e-07
(Q85G12) RecName: Full=50S ribosomal protein L11, chloroplastic;... 60 1e-07
(A9M3X8) RecName: Full=50S ribosomal protein L11; &CP000381_192... 60 2e-07
(B3PK26) RecName: Full=50S ribosomal protein L11; &CP000934_673... 60 2e-07
(Q60A10) RecName: Full=50S ribosomal protein L11; &AE017282_998... 60 2e-07
(A8GV20) RecName: Full=50S ribosomal protein L11; &(Q1RHC6) Rec... 60 2e-07
CP000263_22(CP000263|pid:none) Buchnera aphidicola str. Cc (Cina... 60 2e-07
(Q47JB4) RecName: Full=50S ribosomal protein L11; &CP000089_308... 60 2e-07
BT047598_1(BT047598|pid:none) Salmo salar clone ssal-evf-550-214... 60 2e-07
(P57150) RecName: Full=50S ribosomal protein L11; &BA000003_37(... 60 2e-07
(Q3SF21) RecName: Full=50S ribosomal protein L11; &CP000116_394... 60 2e-07
(A5IJW7) RecName: Full=50S ribosomal protein L11; &CP000702_461... 60 2e-07
(B4RQV8) RecName: Full=50S ribosomal protein L11; &(Q5F5R1) Rec... 60 2e-07
(A1WCN3) RecName: Full=50S ribosomal protein L11; &CP000539_375... 60 2e-07
(A5I7L8) RecName: Full=50S ribosomal protein L11; &(A7FZ81) Rec... 60 2e-07
AE016815_67(AE016815|pid:none) Ashbya gossypii (= Eremothecium g... 60 2e-07
(Q12SX0) RecName: Full=50S ribosomal protein L11; &CP000302_159... 60 2e-07
AM920436_692(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 60 2e-07
(Q1QN48) RecName: Full=50S ribosomal protein L11; &CP000319_144... 60 2e-07
(B4EYV3) RecName: Full=50S ribosomal protein L11; &AM942759_276... 60 2e-07
(Q31U14) RecName: Full=50S ribosomal protein L11; &CP000036_371... 60 2e-07
BC135338_1(BC135338|pid:none) Xenopus tropicalis mitochondrial r... 59 2e-07
CU638743_180(CU638743|pid:none) Podospora anserina genomic DNA c... 59 2e-07
(Q6FF94) RecName: Full=50S ribosomal protein L11; &CR543861_278... 59 2e-07
(Q4UKD0) RecName: Full=50S ribosomal protein L11; &CP000053_115... 59 2e-07
(A9BR94) RecName: Full=50S ribosomal protein L11; &CP000884_505... 59 2e-07
(Q21SF3) RecName: Full=50S ribosomal protein L11; &CP000267_353... 59 2e-07
(P10055) RecName: Full=50S ribosomal protein L11; &R5EB1P(S0196... 59 2e-07
(A1VTG2) RecName: Full=50S ribosomal protein L11; &CP000529_361... 59 2e-07
CP001349_1832(CP001349|pid:none) Methylobacterium nodulans ORS 2... 59 2e-07
(Q87KQ0) RecName: Full=50S ribosomal protein L11; &BA000031_292... 59 2e-07
(A6VKC9) RecName: Full=50S ribosomal protein L11; &CP000746_44(... 59 3e-07
CU914168_2768(CU914168|pid:none) Ralstonia solanacearum strain I... 59 3e-07
(B0TM23) RecName: Full=50S ribosomal protein L11; &CP000931_410... 59 3e-07
BT048568_1(BT048568|pid:none) Salmo salar clone ssal-evf-526-233... 59 3e-07
(Q9K1J3) RecName: Full=50S ribosomal protein L11; &AE002098_118... 59 3e-07
(Q211C4) RecName: Full=50S ribosomal protein L11; &CP000301_343... 59 4e-07
CP001055_1470(CP001055|pid:none) Elusimicrobium minutum Pei191, ... 59 4e-07
(B2JA74) RecName: Full=50S ribosomal protein L11; &CP001037_534... 59 4e-07
(A7ZUJ6) RecName: Full=50S ribosomal protein L11; &(A8A782) Rec... 59 4e-07
(A9IJ32) RecName: Full=50S ribosomal protein L11; &AM902716_499... 59 4e-07
(A4G9U9) RecName: Full=50S ribosomal protein L11; &CU207211_301... 59 4e-07
(A6W3A3) RecName: Full=50S ribosomal protein L11; &CP000749_423... 59 4e-07
(Q30TQ1) RecName: Full=50S ribosomal protein L11; &CP000153_349... 59 4e-07
U00006_34(U00006|pid:none) Escherichia coli str. K-12 substr. MG... 59 4e-07
(B5FC92) RecName: Full=50S ribosomal protein L11; &(Q5E232) Rec... 59 4e-07
V00339_1(V00339|pid:none) E. coli operon rpoBC coding for the be... 59 4e-07
CP001649_1166(CP001649|pid:none) Desulfovibrio salexigens DSM 26... 59 4e-07
(Q7W0S3) RecName: Full=50S ribosomal protein L11; &BX640411_10(... 59 4e-07
(Q890N1) RecName: Full=50S ribosomal protein L11; &AE015927_235... 59 4e-07
EF087563_1(EF087563|pid:none) Picea sitchensis clone WS02919_P16... 59 4e-07
(A7MXE5) RecName: Full=50S ribosomal protein L11; &CP000789_208... 59 4e-07
(A1JIH6) RecName: Full=50S ribosomal protein L11; &AM286415_269... 59 4e-07
(Q83PC3) RecName: Full=50S ribosomal protein L11; &AE005674_405... 59 4e-07
(Q5FM23) RecName: Full=50S ribosomal protein L11; &CP000033_343... 58 5e-07
(A1KB38) RecName: Full=50S ribosomal protein L11; 58 5e-07
(A5IHS5) RecName: Full=50S ribosomal protein L11; &(Q5WZM3) Rec... 58 5e-07
CP001600_156(CP001600|pid:none) Edwardsiella ictaluri 93-146, co... 58 5e-07
(Q0BYA0) RecName: Full=50S ribosomal protein L11; &CP000158_280... 58 5e-07
CP000159_1722(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 58 5e-07
FP236842_244(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96... 58 5e-07
CP001157_596(CP001157|pid:none) Azotobacter vinelandii DJ, compl... 58 5e-07
(B2VG92) RecName: Full=50S ribosomal protein L11; &CU468135_151... 58 5e-07
(Q5P343) RecName: Full=50S ribosomal protein L11; &CR555306_214... 58 5e-07
(A4TS33) RecName: Full=50S ribosomal protein L11; &(A7FNI7) Rec... 58 5e-07
(A7HLB7) RecName: Full=50S ribosomal protein L11; &CP000771_827... 58 5e-07
(B5YEY0) RecName: Full=50S ribosomal protein L11; &(B8E0K3) Rec... 58 5e-07
(A8GQW0) RecName: Full=50S ribosomal protein L11; &(B0BWA5) Rec... 58 5e-07
(Q2S1Q1) RecName: Full=50S ribosomal protein L11; 58 5e-07
CP001339_2310(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ... 58 5e-07
(Q2S901) RecName: Full=50S ribosomal protein L11; &CP000155_595... 58 7e-07
(Q2NJ11) RecName: Full=50S ribosomal protein L11; &CP000061_465... 58 7e-07
CP000517_307(CP000517|pid:none) Lactobacillus helveticus DPC 457... 58 7e-07
CP001614_779(CP001614|pid:none) Teredinibacter turnerae T7901, c... 58 7e-07
(B0CAC9) RecName: Full=50S ribosomal protein L11; &CP000828_277... 58 7e-07
CP001634_1795(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, c... 58 7e-07
CP001281_3177(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 58 7e-07
(Q8KA66) RecName: Full=50S ribosomal protein L11; &AE013218_38(... 58 7e-07
(A9M5R4) RecName: Full=50S ribosomal protein L11; &(B0CH45) Rec... 58 7e-07
(B8FEU5) RecName: Full=50S ribosomal protein L11; &CP001322_191... 58 7e-07
(A6T3L7) RecName: Full=50S ribosomal protein L11; &CP000269_342... 58 7e-07
CP000413_344(CP000413|pid:none) Lactobacillus gasseri ATCC 33323... 58 7e-07
(Q1MPU0) RecName: Full=50S ribosomal protein L11; &AM180252_932... 58 7e-07
FM954972_2799(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 58 7e-07
AP010872_503(AP010872|pid:none) Candidatus Ishikawaella capsulat... 58 7e-07
CU694391_177(CU694391|pid:none) Ralstonia solanacearum strain Mo... 58 7e-07
(B6IRP2) RecName: Full=50S ribosomal protein L11; &CP000613_675... 58 7e-07
(A1VAK0) RecName: Full=50S ribosomal protein L11; &(P62433) Rec... 58 7e-07
(Q3MA19) RecName: Full=50S ribosomal protein L11; &(Q8YLJ8) Rec... 58 7e-07
(B2V7M4) RecName: Full=50S ribosomal protein L11; &CP001080_295... 58 7e-07
(P62435) RecName: Full=50S ribosomal protein L11; &AE017198_421... 58 7e-07
(Q17VN2) RecName: Full=50S ribosomal protein L11; &AM260522_142... 58 7e-07
(P60103) RecName: Full=50S ribosomal protein L11; &BX571860_108... 58 7e-07
CP000582_481(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 58 7e-07
(Q4K522) RecName: Full=50S ribosomal protein L11; &AM181176_542... 57 9e-07
(B2S2I4) RecName: Full=50S ribosomal protein L11; &(O83265) Rec... 57 9e-07
(P60105) RecName: Full=50S ribosomal protein L11; &BA000037_316... 57 9e-07
CP001154_241(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 57 9e-07
AP009049_171(AP009049|pid:none) Clostridium kluyveri NBRC 12016 ... 57 9e-07
(A7GZK3) RecName: Full=50S ribosomal protein L11; &CP000767_134... 57 9e-07
(A8MLC8) RecName: Full=50S ribosomal protein L11; &CP000853_472... 57 9e-07
(Q3J8Q3) RecName: Full=50S ribosomal protein L11; &CP000127_223... 57 9e-07
AF295546_3(AF295546|pid:none) Malawimonas jakobiformis mitochond... 57 9e-07
(B3R7U0) RecName: Full=50S ribosomal protein L11; &(Q0K602) Rec... 57 9e-07
BT087697_1(BT087697|pid:none) Zea mays full-length cDNA clone ZM... 57 9e-07
(P62436) RecName: Full=50S ribosomal protein L11; &(Q8F0R8) Rec... 57 9e-07
CP001227_479(CP001227|pid:none) Rickettsia peacockii str. Rustic... 57 9e-07
(A8G8E3) RecName: Full=50S ribosomal protein L11; &CP000826_273... 57 9e-07
CP001229_1721(CP001229|pid:none) Sulfurihydrogenibium azorense A... 57 9e-07
(Q1IFX7) RecName: Full=50S ribosomal protein L11; &CT573326_428... 57 1e-06
EF144972_1(EF144972|pid:none) Populus trichocarpa clone WS0111_D... 57 1e-06
(A1VYJ0) RecName: Full=50S ribosomal protein L11; &(A7H4Q9) Rec... 57 1e-06
(Q9PA82) RecName: Full=50S ribosomal protein L11; 57 1e-06
CP000932_430(CP000932|pid:none) Campylobacter lari RM2100, compl... 57 1e-06
(A5N4N5) RecName: Full=50S ribosomal protein L11; &CP000673_179... 57 1e-06
(Q31IZ3) RecName: Full=50S ribosomal protein L11; &CP000109_283... 57 1e-06
(Q1GT67) RecName: Full=50S ribosomal protein L11; &CP000356_142... 57 1e-06
AP009510_231(AP009510|pid:none) Uncultured Termite group 1 bacte... 57 1e-06
CP001656_5622(CP001656|pid:none) Paenibacillus sp. JDR-2, comple... 57 1e-06
(B0T065) RecName: Full=50S ribosomal protein L11; &CP000927_441... 57 1e-06
(Q2YDI0) RecName: Full=39S ribosomal protein L11, mitochondrial;... 57 1e-06
(Q3ILQ4) RecName: Full=50S ribosomal protein L11; &CR954246_207... 57 1e-06
(A5V9F5) RecName: Full=50S ribosomal protein L11; &CP000699_254... 57 1e-06
(A0L5W2) RecName: Full=50S ribosomal protein L11; &CP000471_826... 57 1e-06
AB110270_5(AB110270|pid:none) Onion yellows phytoplasma yacO, rp... 57 1e-06
BT049810_1(BT049810|pid:none) Salmo salar clone ssal-evd-574-364... 57 1e-06
(A6WHR7) RecName: Full=50S ribosomal protein L11; &(A9KW91) Rec... 57 1e-06
CP000941_1999(CP000941|pid:none) Xylella fastidiosa M12, complet... 57 1e-06
(A0RQI9) RecName: Full=50S ribosomal protein L11; &CP000487_126... 57 1e-06
(B6ENR7) RecName: Full=50S ribosomal protein L11; &FM178379_286... 57 1e-06
(Q0SQD2) RecName: Full=50S ribosomal protein L11; &(Q0TMN4) Rec... 57 1e-06
(Q11QA1) RecName: Full=50S ribosomal protein L11; &CP000383_312... 56 2e-06
(Q250P8) RecName: Full=50S ribosomal protein L11; &AP008230_455... 56 2e-06
(Q8RHI2) RecName: Full=50S ribosomal protein L11; &AE009951_505... 56 2e-06
AP009484_1873(AP009484|pid:none) Macrococcus caseolyticus JCSC54... 56 2e-06
(Q2JM51) RecName: Full=50S ribosomal protein L11; &CP000240_119... 56 2e-06
(B3QQS6) RecName: Full=50S ribosomal protein L11; &CP001099_185... 56 2e-06
(Q48D25) RecName: Full=50S ribosomal protein L11; &CP000058_440... 56 2e-06
(A9GRA1) RecName: Full=50S ribosomal protein L11; &AM746676_407... 56 2e-06
(B0SAG5) RecName: Full=50S ribosomal protein L11; &(B0SSI8) Rec... 56 2e-06
(B4SG15) RecName: Full=50S ribosomal protein L11; &CP001110_248... 56 2e-06
(Q1IHH0) RecName: Full=50S ribosomal protein L11; &CP000360_467... 56 2e-06
(B3E159) RecName: Full=50S ribosomal protein L11; &CP000975_795... 56 2e-06
(Q03E48) RecName: Full=50S ribosomal protein L11; &CP000422_141... 56 2e-06
(A6LPQ0) RecName: Full=50S ribosomal protein L11; &CP000721_140... 56 2e-06
(Q9ZE24) RecName: Full=50S ribosomal protein L11; &AJ235270_131... 56 2e-06
(B1VAN0) RecName: Full=50S ribosomal protein L11; &AM422018_668... 56 2e-06
(P62434) RecName: Full=50S ribosomal protein L11; &AE017180_284... 56 2e-06
(A9BF37) RecName: Full=50S ribosomal protein L11; &CP000879_352... 56 2e-06
BC076246_1(BC076246|pid:none) Danio rerio zgc:92770, mRNA (cDNA ... 56 2e-06
(B7IGA0) RecName: Full=50S ribosomal protein L11; &CP001185_623... 56 2e-06
(Q2YB09) RecName: Full=50S ribosomal protein L11; &CP000103_753... 56 2e-06
(Q87A28) RecName: Full=50S ribosomal protein L11; &AE009442_192... 56 2e-06
(A6LKQ5) RecName: Full=50S ribosomal protein L11; &CP000716_624... 56 2e-06
BT082620_1(BT082620|pid:none) Anoplopoma fimbria clone afim-evh-... 56 2e-06
(A6UZH7) RecName: Full=50S ribosomal protein L11; &(B7V633) Rec... 56 2e-06
CP001011_2051(CP001011|pid:none) Xylella fastidiosa M23, complet... 56 2e-06
CP001472_2781(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 56 2e-06
AY659357_1(AY659357|pid:none) Synthetic construct Peudomonas aer... 56 2e-06
CU459003_3772(CU459003|pid:none) Magnetospirillum gryphiswaldens... 56 2e-06
(B7JWT8) RecName: Full=50S ribosomal protein L11; &CP001287_168... 55 3e-06
(B3QYL0) RecName: Full=50S ribosomal protein L11; &CP001100_116... 55 3e-06
(Q9CQF0) RecName: Full=39S ribosomal protein L11, mitochondrial;... 55 3e-06
(Q830Q5) RecName: Full=50S ribosomal protein L11; &AE016830_253... 55 3e-06
(Q18CE5) RecName: Full=50S ribosomal protein L11; &AM180355_62(... 55 3e-06
(A6W5S6) RecName: Full=50S ribosomal protein L11; &CP000750_673... 55 3e-06
(A4SGL0) RecName: Full=50S ribosomal protein L11; &CP000607_159... 55 3e-06
(B2TIG4) RecName: Full=50S ribosomal protein L11; &(B2UY99) Rec... 55 4e-06
(B3E7S4) RecName: Full=50S ribosomal protein L11; &CP001089_131... 55 4e-06
(Q119S6) RecName: Full=50S ribosomal protein L11; &CP000393_218... 55 4e-06
(Q28UY2) RecName: Full=50S ribosomal protein L11; &CP000264_563... 55 4e-06
(B1XJH2) RecName: Full=50S ribosomal protein L11; &CP000951_101... 55 4e-06
(Q8A465) RecName: Full=50S ribosomal protein L11; &AE015928_273... 55 4e-06
(Q5L893) RecName: Full=50S ribosomal protein L11; &(Q64NJ3) Rec... 55 4e-06
(Q3A6Q8) RecName: Full=50S ribosomal protein L11; &CP000142_764... 55 4e-06
CP001104_269(CP001104|pid:none) Eubacterium eligens ATCC 27750, ... 55 4e-06
CP001344_3734(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 55 4e-06
(B4R8K1) RecName: Full=50S ribosomal protein L11; 55 4e-06
(Q1GK54) RecName: Full=50S ribosomal protein L11; &CP000377_229... 55 4e-06
CP001107_354(CP001107|pid:none) Eubacterium rectale ATCC 33656, ... 55 4e-06
(P49549) RecName: Full=50S ribosomal protein L11, chloroplastic;... 55 6e-06
(Q8D237) RecName: Full=50S ribosomal protein L11; &BA000021_518... 55 6e-06
(B7KJM5) RecName: Full=50S ribosomal protein L11; &CP001291_100... 55 6e-06
(A1TYI6) RecName: Full=50S ribosomal protein L11; &CP000514_697... 55 6e-06
(Q048T8) RecName: Full=50S ribosomal protein L11; &(Q1G8Z8) Rec... 55 6e-06
(B3WA09) RecName: Full=50S ribosomal protein L11; &(Q035U8) Rec... 54 7e-06
(Q68XN2) RecName: Full=50S ribosomal protein L11; &AE017197_120... 54 7e-06
(Q7U3T6) RecName: Full=50S ribosomal protein L11; &BX569695_152... 54 7e-06
(A0T0Q5) RecName: Full=50S ribosomal protein L11, chloroplastic;... 54 7e-06
CP000003_401(CP000003|pid:none) Streptococcus pyogenes MGAS10394... 54 7e-06
(Q9Z9A4) RecName: Full=50S ribosomal protein L11; &AE001363_72(... 54 7e-06
(Q8DD24) RecName: Full=50S ribosomal protein L11; &AE016795_112... 54 7e-06
AP010935_442(AP010935|pid:none) Streptococcus dysgalactiae subsp... 54 7e-06
(A1BD19) RecName: Full=50S ribosomal protein L11; &CP000492_219... 54 7e-06
(Q9PK76) RecName: Full=50S ribosomal protein L11; &AE002160_581... 54 7e-06
(Q8DM28) RecName: Full=50S ribosomal protein L11; &BA000039_295... 54 7e-06
(Q6AH26) RecName: Full=50S ribosomal protein L11; &AE016822_211... 54 7e-06
CP001331_335(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 54 7e-06
(Q2RFN5) RecName: Full=50S ribosomal protein L11; &CP000232_241... 54 7e-06
(Q67JS8) RecName: Full=50S ribosomal protein L11; &AP006840_308... 54 7e-06
(Q2GA45) RecName: Full=50S ribosomal protein L11; &CP000248_829... 54 7e-06
(A8AY75) RecName: Full=50S ribosomal protein L11; &CP000725_141... 54 9e-06
(Q5N3N9) RecName: Full=50S ribosomal protein L11; &AP008231_891... 54 9e-06
(B1IAH3) RecName: Full=50S ribosomal protein L11; &CP000936_674... 54 9e-06
(Q31QK3) RecName: Full=50S ribosomal protein L11; &CP000100_634... 54 9e-06
(Q38V05) RecName: Full=50S ribosomal protein L11; &CR936503_167... 54 9e-06
(Q97EG5) RecName: Full=50S ribosomal protein L11; &AE001437_309... 54 9e-06
(Q0AF49) RecName: Full=50S ribosomal protein L11; &CP000450_174... 54 9e-06
(B3DPS9) RecName: Full=50S ribosomal protein L11; &(Q8G4T4) Rec... 54 9e-06
(A6TWJ4) RecName: Full=50S ribosomal protein L11; &CP000724_431... 54 9e-06
CP001615_1637(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 54 9e-06
(B2IMU7) RecName: Full=50S ribosomal protein L11; &(B5E2M5) Rec... 54 9e-06
(O78412) RecName: Full=50S ribosomal protein L11, chloroplastic;... 54 9e-06
(A3CPA6) RecName: Full=50S ribosomal protein L11; &CP000387_154... 54 9e-06
(A8Z5T7) RecName: Full=50S ribosomal protein L11; &CP000770_54(... 54 1e-05
(O29712) RecName: Full=50S ribosomal protein L11P; &AE000782_53... 54 1e-05
(Q3AGS9) RecName: Full=50S ribosomal protein L11; &CP000110_242... 54 1e-05
AM946015_471(AM946015|pid:none) Streptococcus uberis 0140J compl... 54 1e-05
(Q5L5H9) RecName: Full=50S ribosomal protein L11; &CR848038_654... 54 1e-05
(Q822I7) RecName: Full=50S ribosomal protein L11; &AE015925_684... 54 1e-05
EF508371_4(EF508371|pid:none) Rhodomonas salina strain CCMP1319 ... 54 1e-05
(A4W2B7) RecName: Full=50S ribosomal protein L11; &CP000408_134... 54 1e-05
(A5FZX5) RecName: Full=50S ribosomal protein L11; &CP000697_192... 54 1e-05
(Q7V381) RecName: Full=50S ribosomal protein L11; &BX548174_211... 53 2e-05
(A8LC68) RecName: Full=50S ribosomal protein L11; &CP000820_593... 53 2e-05
(B3EL57) RecName: Full=50S ribosomal protein L11; &CP001101_295... 53 2e-05
(Q9KGE6) RecName: Full=50S ribosomal protein L11-1; &BA000004_1... 53 2e-05
EF122254_4(EF122254|pid:none) Candidatus Liberibacter americanus... 53 2e-05
(B2FQ34) RecName: Full=50S ribosomal protein L11; &(B4SKV2) Rec... 53 2e-05
(A2RG33) RecName: Full=50S ribosomal protein L11; &(B5XK61) Rec... 53 2e-05
CP000813_87(CP000813|pid:none) Bacillus pumilus SAFR-032, comple... 53 2e-05
(Q03ST9) RecName: Full=50S ribosomal protein L11; &CP000416_556... 53 2e-05
(B0RIR7) RecName: Full=50S ribosomal protein L11; &AM849034_257... 53 2e-05
(B4U476) RecName: Full=50S ribosomal protein L11; &CP001129_140... 53 2e-05
(A1ALT0) RecName: Full=50S ribosomal protein L11; &CP000482_659... 53 2e-05
(A9KJM0) RecName: Full=50S ribosomal protein L11; &CP000885_364... 53 2e-05
(A7GK08) RecName: Full=50S ribosomal protein L11; &(A9VNB0) Rec... 53 2e-05
(B0RU93) RecName: Full=50S ribosomal protein L11; &AM920689_350... 53 2e-05
(A5CUT4) RecName: Full=50S ribosomal protein L11; &AM711867_281... 53 2e-05
(A5WH39) RecName: Full=50S ribosomal protein L11; &CP000713_202... 52 3e-05
AM942444_287(AM942444|pid:none) Corynebacterium urealyticum DSM ... 52 3e-05
(Q07975) RecName: Full=50S ribosomal protein L11; &D14451_1(D14... 52 3e-05
(Q3AUJ5) RecName: Full=50S ribosomal protein L11; &CP000097_213... 52 3e-05
(Q15YB5) RecName: Full=50S ribosomal protein L11; &CP000388_590... 52 3e-05
(Q3BWZ5) RecName: Full=50S ribosomal protein L11; &AM039952_987... 52 3e-05
(Q8PNT4) RecName: Full=50S ribosomal protein L11; &AE008923_952... 52 3e-05
CP001275_657(CP001275|pid:none) Thermomicrobium roseum DSM 5159,... 52 3e-05
(Q8DSX9) RecName: Full=50S ribosomal protein L11; &AE014133_147... 52 3e-05
(A4IJH6) RecName: Full=50S ribosomal protein L11; &CP000557_93(... 52 4e-05
EF082595_1(EF082595|pid:none) Picea sitchensis clone WS02721_I18... 52 4e-05
(Q5WLS5) RecName: Full=50S ribosomal protein L11; &AP006627_137... 52 4e-05
AP008955_206(AP008955|pid:none) Brevibacillus brevis NBRC 100599... 52 4e-05
EF086723_1(EF086723|pid:none) Picea sitchensis clone WS02733_F22... 52 4e-05
(Q0RRT6) RecName: Full=50S ribosomal protein L11; &CT573213_103... 52 4e-05
(Q1XDF0) RecName: Full=50S ribosomal protein L11, chloroplastic;... 52 4e-05
(Q0BUR1) RecName: Full=50S ribosomal protein L11; &CP000394_543... 52 4e-05
EU168190_30(EU168190|pid:none) Heterosigma akashiwo strain NIES ... 52 4e-05
(A9H3T4) RecName: Full=50S ribosomal protein L11; &AM889285_341... 52 4e-05
(Q6AP82) RecName: Full=50S ribosomal protein L11; &CR522870_111... 52 4e-05
(Q5L421) RecName: Full=50S ribosomal protein L11; &BA000043_93(... 52 4e-05
(A6UQ78) RecName: Full=50S ribosomal protein L11P; &CP000742_73... 52 5e-05
(B4S493) RecName: Full=50S ribosomal protein L11; &CP001108_275... 52 5e-05
(Q9CE46) RecName: Full=50S ribosomal protein L11; &A86875(A8687... 52 5e-05
(Q65PC0) RecName: Full=50S ribosomal protein L11; &AE017333_103... 52 5e-05
(Q0I6K7) RecName: Full=50S ribosomal protein L11; &CP000435_267... 52 5e-05
(Q4L3J6) RecName: Full=50S ribosomal protein L11; &(Q5HRL5) Rec... 52 5e-05
(Q2JFI9) RecName: Full=50S ribosomal protein L11; &CP000249_558... 52 5e-05
(Q49V47) RecName: Full=50S ribosomal protein L11; &AP008934_221... 52 5e-05
(A2C034) RecName: Full=50S ribosomal protein L11; &(Q46HG9) Rec... 52 5e-05
(A2RNF4) RecName: Full=50S ribosomal protein L11; &(Q02WD2) Rec... 52 5e-05
(A9BDG7) RecName: Full=50S ribosomal protein L11; &CP000878_223... 51 6e-05
(B0B7N5) RecName: Full=50S ribosomal protein L11; &(B0BBV0) Rec... 51 6e-05
D13303_5(D13303|pid:none) Bacillus subtilis genes for sigma fact... 51 6e-05
AY961573_1(AY961573|pid:none) Lysiphlebus testaceipes mitochondr... 51 6e-05
(Q9CBK1) RecName: Full=50S ribosomal protein L11; &AL583923_249... 51 6e-05
(Q3ATP9) RecName: Full=50S ribosomal protein L11; &CP000108_347... 51 6e-05
(B1MH86) RecName: Full=50S ribosomal protein L11; &CU458896_386... 51 6e-05
(B2A4C6) RecName: Full=50S ribosomal protein L11; &CP001034_181... 51 6e-05
(A7Z0M4) RecName: Full=50S ribosomal protein L11; &(Q06796) Rec... 51 6e-05
(P54030) RecName: Full=50S ribosomal protein L11P; &E64346(E643... 51 6e-05
(B1W447) RecName: Full=50S ribosomal protein L11; &(P36258) Rec... 51 6e-05
(O84321) RecName: Full=50S ribosomal protein L11; &(Q3KM43) Rec... 51 6e-05
EU333168_2(EU333168|pid:none) Uncultured bacterium pTW2 RplA (rp... 51 6e-05
(A1T4H0) RecName: Full=50S ribosomal protein L11; &CP000511_121... 51 6e-05
(A0PM07) RecName: Full=50S ribosomal protein L11; &(B2HSH1) Rec... 51 6e-05
(A1AX79) RecName: Full=50S ribosomal protein L11; &CP000488_732... 51 6e-05
CP001574_112(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 51 8e-05
AY814296_1(AY814296|pid:none) Schistosoma japonicum SJCHGC09154 ... 51 8e-05
(Q31CX7) RecName: Full=50S ribosomal protein L11; &CP000111_215... 51 8e-05
CP000922_92(CP000922|pid:none) Anoxybacillus flavithermus WK1, c... 51 8e-05
(B2SQP7) RecName: Full=50S ribosomal protein L11; &(Q2NZX4) Rec... 51 8e-05
(Q3Z7T3) RecName: Full=50S ribosomal protein L11; &CP000027_961... 51 8e-05
(B2GII3) RecName: Full=50S ribosomal protein L11; &AP009152_585... 51 8e-05
(A1UBE6) RecName: Full=50S ribosomal protein L11; &(Q1BDJ6) Rec... 51 8e-05
(A0T0C2) RecName: Full=50S ribosomal protein L11, chloroplastic;... 51 8e-05
(A4T1M2) RecName: Full=50S ribosomal protein L11; &CP000656_508... 51 8e-05
(A5GWK2) RecName: Full=50S ribosomal protein L11; &CT978603_235... 51 8e-05
CP001114_654(CP001114|pid:none) Deinococcus deserti VCD115, comp... 50 1e-04
(A0JZA3) RecName: Full=50S ribosomal protein L11; &CP000454_297... 50 1e-04
CP000896_148(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 50 1e-04
(Q1Q8P5) RecName: Full=50S ribosomal protein L11; &CP000323_217... 50 1e-04
AP008957_1717(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 50 1e-04
(Q9HL70) RecName: Full=50S ribosomal protein L11P; 50 1e-04
(Q8R7U2) RecName: Full=50S ribosomal protein L11; &AE008691_213... 50 1e-04
CP000001_89(CP000001|pid:none) Bacillus cereus E33L, complete ge... 50 1e-04
(A1KGC0) RecName: Full=50S ribosomal protein L11; &(A5U025) Rec... 50 1e-04
CP001628_1641(CP001628|pid:none) Micrococcus luteus NCTC 2665, c... 50 1e-04
EU971735_1(EU971735|pid:none) Zea mays clone 369788 unknown mRNA. 50 1e-04
(A5FQR2) RecName: Full=50S ribosomal protein L11; &CP000688_874... 50 1e-04
(O87733) RecName: Full=50S ribosomal protein L11; &D87847_2(D87... 50 1e-04
(Q2YSC4) RecName: Full=50S ribosomal protein L11; &AJ938182_488... 50 1e-04
CU469464_386(CU469464|pid:none) Candidatus Phytoplasma mali stra... 50 1e-04
EF122255_2(EF122255|pid:none) Candidatus Liberibacter africanus ... 50 1e-04
CP001618_3139(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 50 1e-04
(A5IQ91) RecName: Full=50S ribosomal protein L11; &(A6TZ14) Rec... 50 1e-04
(P31164) RecName: Full=50S ribosomal protein L11, chloroplastic;... 50 2e-04
AC098695_2(AC098695|pid:none) Oryza sativa (japonica cultivar-gr... 50 2e-04
AY223287_1(AY223287|pid:none) Schistosoma japonicum clone ZZD518... 50 2e-04
(B0K5G4) RecName: Full=50S ribosomal protein L11; &(B0KCI8) Rec... 49 2e-04
(Q9LAK6) RecName: Full=50S ribosomal protein L11; &AF130462_4(A... 49 2e-04
DQ489736_1518(DQ489736|pid:none) Leuconostoc citreum KM20, compl... 49 2e-04
(Q8FSA7) RecName: Full=50S ribosomal protein L11; 49 2e-04
AY191297_2(AY191297|pid:none) Aster yellows phytoplasma clone A4... 49 2e-04
(Q7VDY5) RecName: Full=50S ribosomal protein L11; &AE017126_230... 49 2e-04
(A4QBF0) RecName: Full=50S ribosomal protein L11; &AP009044_586... 49 2e-04
EU016625_25(EU016625|pid:none) Uncultured marine microorganism H... 49 2e-04
(Q82DQ9) RecName: Full=50S ribosomal protein L11; &BA000030_491... 49 3e-04
(A9B5E9) RecName: Full=50S ribosomal protein L11; &CP000875_122... 49 3e-04
(B3ETZ4) RecName: Full=50S ribosomal protein L11; &CP001102_128... 49 3e-04
(Q9VFJ2) RecName: Full=39S ribosomal protein L11, mitochondrial;... 49 3e-04
CP000815_334(CP000815|pid:none) Paulinella chromatophora chromat... 49 3e-04
CP001601_354(CP001601|pid:none) Corynebacterium aurimucosum ATCC... 49 3e-04
CP001337_1428(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 49 3e-04
(P0A463) RecName: Full=50S ribosomal protein L11; &(P0A464) Rec... 49 3e-04
(Q1AU18) RecName: Full=50S ribosomal protein L11; &CP000386_212... 49 3e-04
GQ231541_81(GQ231541|pid:none) Aureococcus anophagefferens strai... 49 4e-04
(Q9UTK2) RecName: Full=60S ribosomal protein L19, mitochondrial;... 49 4e-04
(A6UVR5) RecName: Full=50S ribosomal protein L11P; &CP000743_99... 49 4e-04
(P60101) RecName: Full=50S ribosomal protein L11; &BX248355_51(... 49 4e-04
(O87085) RecName: Full=50S ribosomal protein L11; &AB005914_1(A... 49 4e-04
AY915097_1(AY915097|pid:none) Schistosoma japonicum SJCHGC02984 ... 48 5e-04
(A5UYI4) RecName: Full=50S ribosomal protein L11; &CP000686_324... 48 5e-04
(Q5JH34) RecName: Full=50S ribosomal protein L11P; &AP006878_14... 48 5e-04
(A7NRZ8) RecName: Full=50S ribosomal protein L11; &CP000804_420... 48 5e-04
AY267639_1(AY267639|pid:none) Bigelowiella natans ribosomal prot... 48 7e-04
CP000687_1697(CP000687|pid:none) Actinobacillus pleuropneumoniae... 47 9e-04
AF288092_22(AF288092|pid:none) Naegleria gruberi mitochondrial D... 47 0.001
(A0M3Z3) RecName: Full=50S ribosomal protein L11; &CU207366_234... 47 0.001
(Q12UQ0) RecName: Full=50S ribosomal protein L11P; &CP000300_18... 47 0.002
(P62445) RecName: Full=50S ribosomal protein L11P; &BX950229_14... 47 0.002
CP001398_487(CP001398|pid:none) Thermococcus gammatolerans EJ3, ... 46 0.002
CP001515_300(CP001515|pid:none) Bifidobacterium animalis subsp. ... 46 0.002
(A6GYU4) RecName: Full=50S ribosomal protein L11; &AM398681_114... 45 0.003
(A1SEI6) RecName: Full=50S ribosomal protein L11; &CP000509_671... 45 0.003
(A4FW91) RecName: Full=50S ribosomal protein L11P; &CP000609_14... 45 0.004
(A5FIK2) RecName: Full=50S ribosomal protein L11; &CP000685_193... 45 0.004
(A5UKV0) RecName: Full=50S ribosomal protein L11P; &CP000678_62... 45 0.004
(A6VH19) RecName: Full=50S ribosomal protein L11P; &(A9A9N0) Re... 45 0.006
AF481103_7(AF481103|pid:none) Candidatus Tremblaya princeps tran... 45 0.006
CP000575_1076(CP000575|pid:none) Staphylothermus marinus F1, com... 44 0.007
AM432259_1(AM432259|pid:none) Vitis vinifera contig VV78X029495.... 44 0.007
BT077603_1(BT077603|pid:none) Lepeophtheirus salmonis Pacific fo... 44 0.007
AF274444_1(AF274444|pid:none) Carsonella ruddii ribosomal protei... 44 0.010
BT077818_1(BT077818|pid:none) Lepeophtheirus salmonis Pacific fo... 44 0.010
(A7IAK5) RecName: Full=50S ribosomal protein L11P; &CP000780_22... 44 0.013
(Q9V2S3) RecName: Full=50S ribosomal protein L11P; &AJ248283_1(... 44 0.013
CP001463_376(CP001463|pid:none) Thermococcus sibiricus MM 739, c... 44 0.013
(O27715) RecName: Full=50S ribosomal protein L11P; &AE000666_16... 43 0.017
(Q6A6K2) RecName: Full=50S ribosomal protein L11; &AE017283_184... 43 0.017
CP001357_2272(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 43 0.017
(P52862) RecName: Full=50S ribosomal protein L11P; Flags: Fragme... 43 0.022
(Q8TX52) RecName: Full=50S ribosomal protein L11P; &AE009439_82... 43 0.022
(A9A582) RecName: Full=50S ribosomal protein L11P; &CP000866_38... 43 0.022
(Q8RLD9) RecName: Full=50S ribosomal protein L11; &AE015450_664... 42 0.037
X87296_1(X87296|pid:none) A.thaliana rpl11 gene. 42 0.037
(P52861) RecName: Full=50S ribosomal protein L11; Flags: Fragmen... 42 0.049
(Q46EU7) RecName: Full=50S ribosomal protein L11P; &CP000099_60... 42 0.049
(Q2FQ31) RecName: Full=50S ribosomal protein L11P; &CP000254_63... 41 0.063
CP001338_159(CP001338|pid:none) Candidatus Methanosphaerula palu... 41 0.063
(P47327) RecName: Full=50S ribosomal protein L11; &CP000925_81(... 41 0.063
(Q8PY53) RecName: Full=50S ribosomal protein L11P; &AE008384_10... 40 0.11
BT076657_1(BT076657|pid:none) Caligus rogercresseyi clone crog-e... 40 0.14
CR937008_20(CR937008|pid:none) uncultured archaeon clone fos0128... 39 0.24
(Q812H1) RecName: Full=50S ribosomal protein L11-2/L11-3; &AE01... 39 0.24
AE014186_96(AE014186|pid:none) Plasmodium falciparum 3D7 chromos... 39 0.24
BT080622_1(BT080622|pid:none) Caligus clemensi clone ccle-evs-50... 39 0.31
(P61243) RecName: Full=Protein ycf2; &AP005672_45(AP005672|pid:... 39 0.41
CP000237_657(CP000237|pid:none) Neorickettsia sennetsu strain Mi... 39 0.41
AM285321_47(AM285321|pid:none) Spiroplasma citri GII3-3X chromos... 38 0.54
(P75550) RecName: Full=50S ribosomal protein L11; &S73938(S7393... 38 0.54
AC116986_40(AC116986|pid:none) Dictyostelium discoideum chromoso... 37 0.91
AY090469_1(AY090469|pid:none) Candidatus Tremblaya princeps 23S ... 37 0.92
CP000725_761(CP000725|pid:none) Streptococcus gordonii str. Chal... 37 1.6
Z81457_5(Z81457|pid:none) Caenorhabditis elegans Cosmid C01G12, ... 36 2.0
(P41200) RecName: Full=50S ribosomal protein L11P; AltName: Full... 36 2.0
CP000505_224(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 36 2.7
AY079511_1(AY079511|pid:none) Candidatus Tremblaya princeps from... 36 2.7
FN357504_16(FN357504|pid:none) Schistosoma mansoni genome sequen... 35 3.5
FN357504_15(FN357504|pid:none) Schistosoma mansoni genome sequen... 35 3.5
FN357504_17(FN357504|pid:none) Schistosoma mansoni genome sequen... 35 3.5
FM992689_174(FM992689|pid:none) Candida dubliniensis CD36 chromo... 35 3.5

>(Q23884) RecName: Full=60S ribosomal protein L11, mitochondrial;
&AB000109_21(AB000109|pid:none)
&D21196_3(D21196|pid:none) &T43765(T43765)
Length = 172

Score = 332 bits (850), Expect = 2e-89
Identities = 165/165 (100%), Positives = 165/165 (100%)
Frame = +1

Query: 1 QAAKKVIVREKPILVRLKLIIGAGTASMTPPLGPNLGQYGINSIEFFNDFNTETKELFET 180
QAAKKVIVREKPILVRLKLIIGAGTASMTPPLGPNLGQYGINSIEFFNDFNTETKELFET
Sbjct: 8 QAAKKVIVREKPILVRLKLIIGAGTASMTPPLGPNLGQYGINSIEFFNDFNTETKELFET 67

Query: 181 GLALRVILWINVMKAFYFELQMPKISNLLKEYYKVECEAAKGGNVYIEKERLLKDCFKIA 360
GLALRVILWINVMKAFYFELQMPKISNLLKEYYKVECEAAKGGNVYIEKERLLKDCFKIA
Sbjct: 68 GLALRVILWINVMKAFYFELQMPKISNLLKEYYKVECEAAKGGNVYIEKERLLKDCFKIA 127

Query: 361 ILLCTFNKAEKQWEQIEKKYLRITVLEILGTCRSCKIYVKKAENE 495
ILLCTFNKAEKQWEQIEKKYLRITVLEILGTCRSCKIYVKKAENE
Sbjct: 128 ILLCTFNKAEKQWEQIEKKYLRITVLEILGTCRSCKIYVKKAENE 172

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,302,796,671
Number of extensions: 22616826
Number of successful extensions: 65739
Number of sequences better than 10.0: 508
Number of HSP's gapped: 65534
Number of HSP's successfully gapped: 509
Length of query: 357
Length of database: 1,061,185,681
Length adjustment: 130
Effective length of query: 227
Effective length of database: 636,287,441
Effective search space: 144437249107
Effective search space used: 144437249107
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.55 gvh: 0.41 alm: 0.38 top: 0.53 tms: 0.00 mit: 0.25 mip: 0.08
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

68.0 %: cytoplasmic
16.0 %: nuclear
8.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: peroxisomal

>> prediction for Contig-U03315-1 is cyt

VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 1