Contig-U16438-1
Contig ID Contig-U16438-1
Contig update 2004. 6.11
Contig sequence
>Contig-U16438-1 (Contig-U16438-1Q) /CSM_Contig/Contig-U16438-1Q.Seq.d
CATAAACGGTGAATACCTCGACTCCTAAATCGATGAAGACCGTAGCAAAC
TGCGATAATTCACTTGAATTGCAGCCTACTGGGATAGTTGAAATGTTGAA
CGCACATGATGACATCGGTCCTTTCGGATTAGGTGTTATACTTGGGTGAG
AGTGGTCACAAATATATATATATACATAATTAAAATTTCATACAATCATG
GTAGCAATTAATTCAGTTTCTAATTACCTATCATTATTGGATGAAGATCA
ATTAGAATTGAAATCATATTCATTAGAAAAATTAGATTCATGTGTTGATG
AATTTTGGTCAGAAATTGCATCATCTTCAATCGATAAAATAAAATCATTA
TCAGTCAATAAACAATTTCCAAAACATGAACTTGCATCATTAGTTTTATC
AAAAGTATATTACAATTTAAGTGATTTCCCAAATTCAATGGAATATGCGT
TATCAGCTGGTTCTTTATTTAATGTTTTATCAAAGAGTGAATACATTGAA
ACACTTTTATATAAATTTATTGATGAATATATTAAATTAAGAACATCCAC
AAATAAAGACACTGTTATCAATCCACATCTCGAATCAATTGTAATGGGAA
TGTTTGATAGATGTTTCAAGGAAGGATCATATAAACAGGCATTAGGTATT
GCTATTGAAGCAAGAAGATTAGATATAATTGAAAAAGCAATTTCACAATC
TGGTAATGTAAATAGTATGCTCTCTTATTGTCTTCACATTTGTAATGTTT
CAGTAAACAATCGTCATTTCCGTCATAGTGTTTTAGGTATTTTGGTTAAT
CTTCATTTAGCCCAAGAAAAACCAGATTATCTTAGTGTTGTTCAATGTTT
AATCTTTTTAGATAACCATATTGAAGTTGCTACAATTTTATTATCATTAA
TTAAAAAAGATGAAGAATCATTATTACTTGCATATCAAATTGGATTTGAT
CTTTTTCAAAATAGTACACAACAATTTTTATTAAATGTTCGTAATAGATT
ACCACCAGTTGAAAAGAAATCAACAACAACAACAACAACAACACCAGCAT
CAGATAGTATGGAAATTGATATAGATAGTGGTAATGAAAAGAGTGGAGGA
TCATCATCCTTTGAACAACGTTTAGAAAGATTACATTCAATTTTAATTGG
AGATGTATCAATTGGTATGAATTTAGAATTTCTTTATCGTAATTGTAGTA
CTGATATGCACATTTTACAATCAATGAAAACCACCAGTGAATTACATAAG
GGTGCCATCTTTTATTCTGGTACATTATTTGCCAATGCATTGATGCATGC
TGGTACAACTAGAGATACATTTTTAAGAAGTAATATTGAATGGTTATACA
AATCAACTCATTGGACAAAGTTTAGCGCAATCTCAAGTTTGGGTGTAATT
AACAAGGGTCATATCAAAGAGAGCAAATCACTCTTGAAGACTTATTTGCC
AGGTGCTAGTGTCAATCAAACTCCATACTCTGAATCTGGTTCTCTTTATG
CTCTCGGTTTAATTCATGCTTCACATGGCGAGGAGATCATCGATTATTTA
GTGGAGAAGTTACACATCAACAATGCCATCCTTCATCATGGTGCATCCTT
GGGTTTGGGTTTGGCTGCAATGGCAACAGGTTACATTCAATTTTAATTGG
AGATGTATCAATTGGTATGAATTTAGAATTTCTTTATCGTAATTGTAGTA
CTGATATGCACATTTTACAATCAATGAAAACCACCAGTGAATTACATAAG
GGTGCCATCTTTTATTCTGGTACATTATTTGCCAATGCATTGATGCATGC
TGGTACAACTAGAGATACATTTTTAAGAAGTAATATTGAATGGTTATACA
AATCAACTCATTGGACAAAGTTTAGCGCAATCTCAAGTTTGGGTGTAATT
AACAAGGGTCATATCAAAGAGAGCAAATCACTCTTGAAGACTTATTTGCC
AGGTGCTAGTGTCAATCAAACTCCATACTCTGAATCTGGTTCTCTTTATG
CTCTCGGTTTAATTCATGCTTCACATGGCGAGGAGATCATCGATTATTTA
GTGGAGAAGTTACACATCAACAATGCCATCCTTCATCATGGTGCATCCTT
GGGTTTGGGTTTGGCTGCAATGGCAACAGGTCGTGATGATTTGTATGAAG
ATTTGAAAAGTGTGCTCTATAACGATGACGCCGTCTCTGGTGAGGCCGCT
GGTTTGGCTATGGGTTTGGTGATGTTGGGCAGTGGCGCAAAGAAGGCCAT
CGAAGAGATGTTGGCATATGCTCATGAGACCCAACATGAGAAAACCATCA
GATCCTTATCCATGGGTTTGGCATTCTTAATGTATGGCAAGGAGGAGAGT
GCCGACACCTTGATCGAGCAAATGATTGGTGACAAAGATCCATTGATTAG
ATATGGTGGTATGTATGCAATTGCCTTTGCTTACTGTGGAACTGGTCACA
ATGATGCCTTGAGAAAACTCTTACATGTCGCCGTCTCTGATGGTACCGAC
TCTGTTAGAAGAGCTGCCGTCACTTGTATTGGTTTCGTTTTGTCCAGACA
ACCAGAGAAATGTCCAAAGGCAATCGCTTTGTTGGCCGAAAGTTATAACC
CACACGTTCGTTATGGTGCCGCTTTCGCTTTGGGTATTGCATGTGCTGGT
ACCGGTCAAAGAGATGCTTTGGAAATTTTAAAATCACTCACCACCGATAG
TGTTGGTTACGTTAAACAAGCCGCTTGGATCTCCATGGCTATGGTATTGA
TTCAAACCAGTAAAGAGTTGGTACCAGAGGCTGAAACCGCCAGAAAATTA
TTCGCCACTTGTATCAGTGATAAACGTGAGGATTCAATGTCCAAGTTTGG
TGCTGTATTAGCATTTGGTGTCATTGATGCCGGTGGTAGAAACTCTACCC
ATTCAATTACATTCACCAAGTGGTCACAAGAATATGAATGCTATCGTTGG
TATTGCTGGTTTCCTTCAATTTTGGTATTGGTTCCCAATGACTCACTTTA
TGGGCTTAGCGTTAACTCCAACCTCTATCATTGGTCTCAACAAAAACTTG
GAAATGCCAGTTTTCACTTTCAAATCCAATTGCAGACCATCACTCTTTGC
TTATCCACCTGAAACCAAACCATCCACCACAAGCTCAACCAATAAAATTG
AAACAGCCATCCTCTCCTACAGTAGAAAGAATAAACTTCAAAGTTCTCGT
TCCGCTATGAATATTGATCAAGATGTTGAAAAGAAAGAAAAAGAGGAGAA
AGAAGCCAAAGAAAAAGAAGCCAAAGAAAAGGAAGAAAAAGAAGCTGCCA
AAGCCGAAGAAAAAGAACCACTCTTTGAAAGAAAATCAAATCCTGCTCGT
ATCGTACCAAGACAATTACAATATGTTCAATTTGATGATGCTCGTTATCA
ACCAATTAAAAAGAGTCCTGCCATTGGTATCGTTATGTTGAGAGATTTAA
CTCCAAATGAACCAGAACAATTGGTTGTAAAAGAAAAACCAGAAACTAAA
CAAGAAACTGTTGGAAATCAATCTGGTACTGCTACTGCTACTGCTTCACT
TCCAAATGCTACCACTACAACTTCTCCAACTCTTCCAGAACCTTCAACTC
CAGAACCATTTGAATTTACTGAATAAAACTCTTTTTATAAAAAAATTTAA
TAAATATATAAAA

Gap no gap
Contig length 3663
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 883024
End point 880900
Strand (PLUS/MINUS) MINUS
Number of clones 142
Number of EST 255
Link to clone list U16438
List of clone(s)

est1=AHQ834F,1,621
est2=AHM689F,141,786
est3=AHM230F,142,732
est4=AHM595F,142,783
est5=VHH384F,142,787
est6=VHI540F,144,745
est7=AHP321F,147,345
est8=AHB495F,148,788
est9=AHG681F,148,801
est10=SHE388F,148,796
est11=AHM826F,149,732
est12=AHP831F,150,620
est13=AHG810F,156,789
est14=AHK617F,156,668
est15=AHQ264F,156,793
est16=AHO423F,157,788
est17=VHJ394F,157,789
est18=AHC243F,158,784
est19=AHD441F,158,789
est20=AHE170F,158,788
est21=AHE327F,158,732
est22=AHE329F,158,785
est23=AHE543F,158,789
est24=AHG306F,158,735
est25=AHH247F,158,790
est26=AHH337F,158,754
est27=AHH777F,158,646
est28=AHJ477F,158,670
est29=AHK104F,158,748
est30=AHO156F,158,542
est31=AHQ683F,158,667
est32=SHA555F,158,732
est33=SHE234F,158,785
est34=SHH405F,158,782
est35=SHL463F,158,781
est36=SHL627F,158,645
est37=VHE705F,158,784
est38=VHG363F,158,787
est39=VHH271F,158,781
est40=VHH809F,158,741
est41=VHI470F,158,735
est42=VHK752F,158,812
est43=VHQ273F,158,784
est44=AHI748F,159,811
est45=AFB394F,160,546
est46=AHA728F,160,785
est47=AHB444F,160,789
est48=AHD195F,160,788
est49=AHD342F,160,789
est50=AHJ432F,160,811
est51=AHJ864F,160,733
est52=AHL260F,160,790
est53=AHL492F,160,786
est54=AHL636F,160,791
est55=AHN525F,160,788
est56=AHO833F,160,787
est57=AHQ304F,160,751
est58=VHJ632F,160,664
est59=VHM634F,160,781
est60=VHN842F,160,784
est61=AHB176F,162,747
est62=AHK307F,162,788
est63=AHK371F,163,786
est64=AHD110F,164,788
est65=AHG895F,164,812
est66=SHD553F,164,775
est67=VHE869F,164,784
est68=VHI780F,164,781
est69=VHJ820F,164,785
est70=VHM583F,164,812
est71=AHK531F,166,787
est72=AHL392F,166,792
est73=AHN211F,166,670
est74=AHP370F,166,608
est75=SHA607F,166,784
est76=VHD263F,166,788
est77=CHS110F,167,813
est78=AHB222F,168,813
est79=AHB255F,168,786
est80=AHC353F,168,746
est81=AHG821F,168,812
est82=AHJ391F,168,353
est83=AHQ166F,169,357
est84=VHK813F,169,784
est85=AHB468F,170,816
est86=AHE469F,170,789
est87=AHP109F,170,340
est88=VHK843F,170,781
est89=VHP539F,170,811
est90=AHK152F,171,789
est91=AHD675F,172,788
est92=AHJ217F,172,800
est93=SHG852F,172,811
est94=AHQ775F,176,791
est95=SHA224F,176,788
est96=SHA419F,179,783
est97=AHJ505F,181,732
est98=AHB581F,182,789
est99=VHN566F,199,783
est100=AHC721F,200,744
est101=VHO270F,200,812
est102=AHH558F,201,389
est103=AHJ563F,202,743
est104=AHP631F,202,623
est105=AHC667F,203,667
est106=VHA369F,264,640
est107=SHA542F,270,902
est108=AHE667F,276,533
est109=VHL642F,281,913
est110=VHE502F,283,863
est111=VHQ121F,291,527
est112=AHF309F,307,913
est113=VHG183Z,317,468
est114=AHM786Z,319,660
est115=AHH270F,354,1003
est116=AHE510Z,360,777
est117=AHH514F,399,621
est118=AHH572F,399,607
est119=AHF233F,419,1097
est120=AHI443F,431,581
est121=VHG148F,517,1220
est122=VHI237F,670,1307
est123=AHG167F,680,1111
est124=VHD609F,708,1244
est125=SFB839F,736,1327
est126=AFB394X,1132,2131
est127=AFC881F,2036,2504
est128=SLG282F,2248,2938
est129=SLG727F,2248,2947
est130=SFB631F,2331,2832
est131=AHH247Z,2448,3221
est132=AHQ264Z,2448,3129
est133=SHA542Z,2468,3197
est134=VHJ632Z,2468,3209
est135=VHH809Z,2469,3209
est136=SHA555Z,2472,3222
est137=AHE170Z,2485,3221
est138=AHK617Z,2486,3236
est139=AHD195Z,2490,3221
est140=AHJ505Z,2490,3226
est141=VHM583Z,2490,3212
est142=AHC243Z,2510,3236
est143=AHC667Z,2510,3221
est144=AHH514Z,2510,3221
est145=AHJ864Z,2510,3226
est146=AHD441Z,2511,3289
est147=AHJ432Z,2511,3221
est148=VHD263Z,2511,3274
est149=VHJ394Z,2511,3197
est150=AHE469Z,2512,3221
est151=VHI540Z,2512,3233
est152=AHE543Z,2539,3283
est153=AHE327Z,2540,3289
est154=VHQ273Z,2540,3207
est155=AHD110Z,2541,3289
est156=AHJ563Z,2541,3177
est157=VHJ820Z,2542,3271
est158=VHK843Z,2542,3222
est159=SHA224Z,2544,3275
est160=AHB176Z,2545,3249
est161=VHK813Z,2545,3275
est162=VHO270Z,2547,3206
est163=AHK104Z,2562,3221
est164=VHI470Z,2570,3179
est165=AHH337Z,2571,3284
est166=VHK752Z,2584,3260
est167=AHB255Z,2586,3344
est168=AHG681Z,2586,3221
est169=AHK531Z,2594,3283
est170=VHE705Z,2595,3274
est171=AHP109Z,2596,3236
est172=AHP370Z,2600,3221
est173=AHQ304Z,2600,3301
est174=AHP405Z,2621,3221
est175=VHE869Z,2633,3258
est176=AHG895Z,2657,3221
est177=AHP321Z,2657,3220
est178=AHP631Z,2662,3221
est179=AHP831Z,2663,3283
est180=AHN525Z,2672,3283
est181=AHG810Z,2683,3221
est182=AHQ775Z,2711,3218
est183=AHH270Z,2745,3393
est184=SHE234Z,2761,2940
est185=FC-IC0100F,2773,3195
est186=AHC721Z,2792,3085
est187=AHI443Z,2801,2911
est188=AHQ575Z,2820,2983
est189=SHA419Z,2831,3601
est190=VHP539Z,2847,3658
est191=VHD609Z,2849,3559
est192=SHG552Z,2857,3179
est193=AHB222Z,2860,3663
est194=AHF309Z,2865,3624
est195=AHM826Z,2875,3663
est196=SHG852Z,2895,3647
est197=SHA607Z,2896,3659
est198=VHI237Z,2896,3660
est199=CHS110Z,2897,3653
est200=VHM634Z,2897,3646
est201=SHL463Z,2898,3659
est202=SHD860Z,2899,3574
est203=SHL627Z,2899,3659
est204=AHH572Z,2904,3663
est205=AHL260Z,2904,3663
est206=AHM595Z,2904,3663
est207=AHN211Z,2904,3663
est208=AHE329Z,2905,3663
est209=AHJ217Z,2905,3663
est210=AFC881Z,2906,3663
est211=AHD342Z,2906,3622
est212=AHL392Z,2906,3663
est213=AHL636Z,2906,3663
est214=AHM230Z,2906,3661
est215=AHO223Z,2906,3663
est216=AHQ166Z,2906,3663
est217=AHB444Z,2907,3558
est218=AHF233Z,2907,3663
est219=AHB581Z,2909,3663
est220=SHE388Z,2922,3611
est221=AHJ477Z,2925,3262
est222=AHJ391Z,2934,3262
est223=AHO633Z,2935,3611
est224=VHA369Z,2946,3268
est225=VHI780Z,2961,3660
est226=VHN566Z,2964,3658
est227=VHN842Z,2964,3642
est228=AFB394Z,2972,3663
est229=AHB495Z,2972,3663
est230=AHH558Z,2972,3663
est231=AHI748Z,2975,3625
est232=AHB468Z,2976,3663
est233=AHC353Z,2976,3663
est234=AHH777Z,2976,3656
est235=AHL492Z,2976,3663
est236=AHM689Z,2976,3663
est237=AHK371Z,2977,3663
est238=AHQ683Z,2978,3663
est239=AHO354Z,2980,3656
est240=AHA728Z,2999,3663
est241=SLG281Z,3003,3663
est242=SLG727Z,3004,3663
est243=VHG363Z,3009,3660
est244=VHE502Z,3012,3540
est245=SHD553Z,3013,3658
est246=AHO611Z,3029,3663
est247=SFB631Z,3035,3656
est248=VHH384Z,3058,3660
est249=VHG148Z,3059,3657
est250=AHG821Z,3061,3643
est251=VHH271Z,3064,3656
est252=AHG306Z,3069,3624
est253=AHG167Z,3070,3525
est254=FC-IC0017F,3088,3354
est255=SHH405Z,3110,3611
Translated Amino Acid sequence
ingeylds*idedrsklr*ft*iaaywds*nvert**hrsfrircytwvrvvtniyiyii
kisynhgsn*fsf*lpiiig*rsirieiifirkirfmc**ilvrnciifnr*nkiiisq*
tiskt*tciisfiksilqfk*fpkfngicviswffi*cfike*ih*ntfi*iy**iy*ik
nihk*rhcyqstsrincngnv**mfqgrii*tgirycy*skkiryn*ksnftiw*ck*ya
lllsshl*cfskqssfps*cfryfg*ssfsprktrls*ccsmfnlfr*py*scynfiiin
*kr*riiitcisnwi*sfsk*yttifikcs**itts*keinnnnnnntsir*ygn*yr*w
**kewriiil*ttfrkitfnfnwrcinwyefrisls*l*y*yahftinenhq*it*gchl
lfwyiicqcidacwyn*ryifkk*y*mviqinsldkv*rnlkfgcn*qgsyqreqitled
lfarc*cqsnsil*IWFSLCSRFNSCFTWRGDHRLFSGEVTHQQCHPSSWCILGFGFGCN
GNRLHSILIGDVSIGMNLEFLYRNCSTDMHILQSMKTTSELHKGAIFYSGTLFANALMHA
GTTRDTFLRSNIEWLYKSTHWTKFSAISSLGVINKGHIKESKSLLKTYLPGASVNQTPYS
ESGSLYALGLIHASHGEEIIDYLVEKLHINNAILHHGASLGLGLAAMATGRDDLYEDLKS
VLYNDDAVSGEAAGLAMGLVMLGSGAKKAIEEMLAYAHETQHEKTIRSLSMGLAFLMYGK
EESADTLIEQMIGDKDPLIRYGGMYAIAFAYCGTGHNDALRKLLHVAVSDGTDSVRRAAV
TCIGFVLSRQPEKCPKAIALLAESYNPHVRYGAAFALGIACAGTGQRDALEILKSLTTDS
VGYVKQAAWISMAMVLIQTSKELVPEAETARKLFATCISDKREDSMSKFGAVLAFGVIDA
GGRNSTHSITFTKWSQEYECYRWYCWFPSILVLVPNDSLYGLSVNSNLYHWSQQKLGNAS
FHFQIQLQTITLCLST*nqtihhklnq*n*nshpllq*ke*tskfsfryey*src*kerk
rgersqrkrsqrkgrkrscqsrrkrttl*kkikscsyrtktiticsi**cslstn*kesc
hwyryverfnsk*trtigckrktrn*trncwksiwycycycftskcyhynfsnssrtfns
rti*iy*iklfl*knlini*


Translated Amino Acid sequence (All Frames)
Frame A:
hkr*iprllnr*rp*qtaiihlncsllg*lkc*thmmtsvlsd*vlylgesghkyiyihn
*nfiqsw*qliqflityhywmkin*n*nhih*kn*ihvlmnfgqklhhlqsik*nhyqsi
nnfqnmnlhh*fyqkyiti*visqiqwnmryqlvlylmfyqrvntlkhfyinllmniln*
ehpqiktllsihisnql*weclidvsrkdhinrh*vlllkqed*i*lkkqfhnlvm*ivc
slivftfvmfq*tivisvivf*vfwlifi*pkknqiilvlfnv*sf*itilkllqfyyh*
lkkmknhyylhikldliffkivhnnfy*mfvidyhqlkrnqqqqqqqhqhqivwkli*iv
vmkrvedhhplnnv*kdyiqf*lemyqlv*i*nffivivvlictfynq*kppvnyirvps
filvhylpmh*cmlvqleihf*evilngytnqligqslaqsqvwv*ltrviskranhs*r
licqvlvsiklhtlnlvlfmlsv*fmlhmarrssii*wrsytstmpsfimvhpwvwvwlq
wqqvtfnfnwrcinwyefrisls*l*y*yahftinenhq*it*gchllfwyiicqcidac
wyn*ryifkk*y*mviqinsldkv*rnlkfgcn*qgsyqreqitledlfarc*cqsnsil
*iwfslcsrfnscftwrgdhrlfsgevthqqchpsswcilgfgfgcngnrs**fv*rfek
cal*r*rrlw*grwfgygfgdvgqwrkeghrrdvgics*dpt*enhqilihgfgilnvwq
ggecrhldrandw*qrsid*iwwyvcnclcllwnwsq*clektltcrrl*wyrlc*kscr
hlywfrfvqttremskgnrfvgrkl*ptrslwcrfrfgycmcwyrskrcfgnfkithhr*
cwlr*tsrldlhgygidsnq*rvgtrg*nrqkiirhlyq**t*gfnvqvwccisiwch*c
rw*klypfnyihqvvtri*mlslvllvsfnfgigsq*ltlwa*r*lqplslvstktwkcq
fslsnpiadhhsllihlkpnhppqaqpiklkqpssptverinfkvlvpl*ilikmlkrkk
krrkkpkkkkpkkrkkkklpkpkkknhslkenqillvsyqdnynmfnlmmlvinqlkrvl
plvslc*ei*lqmnqnnwl*kknqklnkklleinlvllllllhfqmlplqllqlfqnlql
qnhlnllnktlfikkfnkyik


Frame B:
ingeylds*idedrsklr*ft*iaaywds*nvert**hrsfrircytwvrvvtniyiyii
kisynhgsn*fsf*lpiiig*rsirieiifirkirfmc**ilvrnciifnr*nkiiisq*
tiskt*tciisfiksilqfk*fpkfngicviswffi*cfike*ih*ntfi*iy**iy*ik
nihk*rhcyqstsrincngnv**mfqgrii*tgirycy*skkiryn*ksnftiw*ck*ya
lllsshl*cfskqssfps*cfryfg*ssfsprktrls*ccsmfnlfr*py*scynfiiin
*kr*riiitcisnwi*sfsk*yttifikcs**itts*keinnnnnnntsir*ygn*yr*w
**kewriiil*ttfrkitfnfnwrcinwyefrisls*l*y*yahftinenhq*it*gchl
lfwyiicqcidacwyn*ryifkk*y*mviqinsldkv*rnlkfgcn*qgsyqreqitled
lfarc*cqsnsil*IWFSLCSRFNSCFTWRGDHRLFSGEVTHQQCHPSSWCILGFGFGCN
GNRLHSILIGDVSIGMNLEFLYRNCSTDMHILQSMKTTSELHKGAIFYSGTLFANALMHA
GTTRDTFLRSNIEWLYKSTHWTKFSAISSLGVINKGHIKESKSLLKTYLPGASVNQTPYS
ESGSLYALGLIHASHGEEIIDYLVEKLHINNAILHHGASLGLGLAAMATGRDDLYEDLKS
VLYNDDAVSGEAAGLAMGLVMLGSGAKKAIEEMLAYAHETQHEKTIRSLSMGLAFLMYGK
EESADTLIEQMIGDKDPLIRYGGMYAIAFAYCGTGHNDALRKLLHVAVSDGTDSVRRAAV
TCIGFVLSRQPEKCPKAIALLAESYNPHVRYGAAFALGIACAGTGQRDALEILKSLTTDS
VGYVKQAAWISMAMVLIQTSKELVPEAETARKLFATCISDKREDSMSKFGAVLAFGVIDA
GGRNSTHSITFTKWSQEYECYRWYCWFPSILVLVPNDSLYGLSVNSNLYHWSQQKLGNAS
FHFQIQLQTITLCLST*nqtihhklnq*n*nshpllq*ke*tskfsfryey*src*kerk
rgersqrkrsqrkgrkrscqsrrkrttl*kkikscsyrtktiticsi**cslstn*kesc
hwyryverfnsk*trtigckrktrn*trncwksiwycycycftskcyhynfsnssrtfns
rti*iy*iklfl*knlini*


Frame C:
*tvntstpksmktvancdnslelqptgivemlnahddigpfglgvilg*ewsqiyiyt*l
kfhtimvainsvsnylslldedqlelksyslekldscvdefwseiasssidkikslsvnk
qfpkhelaslvlskvyynlsdfpnsmeyalsagslfnvlskseyietllykfideyiklr
tstnkdtvinphlesivmgmfdrcfkegsykqalgiaiearrldiiekaisqsgnvnsml
syclhicnvsvnnrhfrhsvlgilvnlhlaqekpdylsvvqclifldnhievatillsli
kkdeeslllayqigfdlfqnstqqfllnvrnrlppvekkstttttttpasdsmeididsg
neksggsssfeqrlerlhsiligdvsigmnleflyrncstdmhilqsmkttselhkgaif
ysgtlfanalmhagttrdtflrsniewlyksthwtkfsaisslgvinkghikesksllkt
ylpgasvnqtpysesgslyalglihashgeeiidylveklhinnailhhgaslglglaam
atgyiqf*lemyqlv*i*nffivivvlictfynq*kppvnyirvpsfilvhylpmh*cml
vqleihf*evilngytnqligqslaqsqvwv*ltrviskranhs*rlicqvlvsiklhtl
nlvlfmlsv*fmlhmarrssii*wrsytstmpsfimvhpwvwvwlqwqqvvmicmki*kv
csitmtpslvrplvwlwvw*cwavaqrrpskrcwhmlmrpnmrkpsdpypwvwhs*cmar
rrvptp*ssk*lvtkih*ldmvvcmqlplltvelvtmmp*ensymspslmvptlleelps
lvlvsfcpdnqrnvqrqslcwpkvithtfvmvplslwvlhvlvpvkemlwkf*nhsppiv
lvtlnkplgspwlwy*fkpvkswyqrlkppenysplvsvinvriqcpslvly*hlvslmp
vvetlpiqlhspsghknmnaivgiagflqfwywfpmthfmglaltptsiiglnknlempv
ftfksncrpslfayppetkpsttsstnkietailsysrknklqssrsamnidqdvekkek
eekeakekeakekeekeaakaeekeplferksnparivprqlqyvqfddaryqpikkspa
igivmlrdltpnepeqlvvkekpetkqetvgnqsgtatataslpnattttsptlpepstp
epfefte*nsfykki**iyk


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U16438-1 (Contig-U16438-1Q)
/CSM_Contig/Contig-U16438-1Q.Seq.d
(3663 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U16438-1 (Contig-U16438-1Q) /CSM_Contig/Conti... 4329 0.0
Contig-U11364-1 (Contig-U11364-1Q) /CSM_Contig/Conti... 317 7e-86
Contig-U13954-1 (Contig-U13954-1Q) /CSM_Contig/Conti... 315 3e-85
Contig-U10683-1 (Contig-U10683-1Q) /CSM_Contig/Conti... 315 3e-85
Contig-U16602-1 (Contig-U16602-1Q) /CSM_Contig/Conti... 313 1e-84
Contig-U16499-1 (Contig-U16499-1Q) /CSM_Contig/Conti... 313 1e-84
Contig-U16445-1 (Contig-U16445-1Q) /CSM_Contig/Conti... 313 1e-84
Contig-U16382-1 (Contig-U16382-1Q) /CSM_Contig/Conti... 313 1e-84
Contig-U16366-1 (Contig-U16366-1Q) /CSM_Contig/Conti... 313 1e-84
Contig-U16328-1 (Contig-U16328-1Q) /CSM_Contig/Conti... 313 1e-84

>Contig-U16438-1 (Contig-U16438-1Q) /CSM_Contig/Contig-U16438-1Q.Seq.d
Length = 3663

Score = 4329 bits (2184), Expect = 0.0
Identities = 2184/2184 (100%)
Strand = Plus / Plus


Query: 1044 ccagcatcagatagtatggaaattgatatagatagtggtaatgaaaagagtggaggatca 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 ccagcatcagatagtatggaaattgatatagatagtggtaatgaaaagagtggaggatca 1103


Query: 1104 tcatcctttgaacaacgtttagaaagattacattcaattttaattggagatgtatcaatt 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 tcatcctttgaacaacgtttagaaagattacattcaattttaattggagatgtatcaatt 1163


Query: 1164 ggtatgaatttagaatttctttatcgtaattgtagtactgatatgcacattttacaatca 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 ggtatgaatttagaatttctttatcgtaattgtagtactgatatgcacattttacaatca 1223


Query: 1224 atgaaaaccaccagtgaattacataagggtgccatcttttattctggtacattatttgcc 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 atgaaaaccaccagtgaattacataagggtgccatcttttattctggtacattatttgcc 1283


Query: 1284 aatgcattgatgcatgctggtacaactagagatacatttttaagaagtaatattgaatgg 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 aatgcattgatgcatgctggtacaactagagatacatttttaagaagtaatattgaatgg 1343


Query: 1344 ttatacaaatcaactcattggacaaagtttagcgcaatctcaagtttgggtgtaattaac 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1344 ttatacaaatcaactcattggacaaagtttagcgcaatctcaagtttgggtgtaattaac 1403


Query: 1404 aagggtcatatcaaagagagcaaatcactcttgaagacttatttgccaggtgctagtgtc 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 aagggtcatatcaaagagagcaaatcactcttgaagacttatttgccaggtgctagtgtc 1463


Query: 1464 aatcaaactccatactctgaatctggttctctttatgctctcggtttaattcatgcttca 1523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 aatcaaactccatactctgaatctggttctctttatgctctcggtttaattcatgcttca 1523


Query: 1524 catggcgaggagatcatcgattatttagtggagaagttacacatcaacaatgccatcctt 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 catggcgaggagatcatcgattatttagtggagaagttacacatcaacaatgccatcctt 1583


Query: 1584 catcatggtgcatccttgggtttgggtttggctgcaatggcaacaggttacattcaattt 1643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 catcatggtgcatccttgggtttgggtttggctgcaatggcaacaggttacattcaattt 1643


Query: 1644 taattggagatgtatcaattggtatgaatttagaatttctttatcgtaattgtagtactg 1703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 taattggagatgtatcaattggtatgaatttagaatttctttatcgtaattgtagtactg 1703


Query: 1704 atatgcacattttacaatcaatgaaaaccaccagtgaattacataagggtgccatctttt 1763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 atatgcacattttacaatcaatgaaaaccaccagtgaattacataagggtgccatctttt 1763


Query: 1764 attctggtacattatttgccaatgcattgatgcatgctggtacaactagagatacatttt 1823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1764 attctggtacattatttgccaatgcattgatgcatgctggtacaactagagatacatttt 1823


Query: 1824 taagaagtaatattgaatggttatacaaatcaactcattggacaaagtttagcgcaatct 1883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 taagaagtaatattgaatggttatacaaatcaactcattggacaaagtttagcgcaatct 1883


Query: 1884 caagtttgggtgtaattaacaagggtcatatcaaagagagcaaatcactcttgaagactt 1943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1884 caagtttgggtgtaattaacaagggtcatatcaaagagagcaaatcactcttgaagactt 1943


Query: 1944 atttgccaggtgctagtgtcaatcaaactccatactctgaatctggttctctttatgctc 2003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1944 atttgccaggtgctagtgtcaatcaaactccatactctgaatctggttctctttatgctc 2003


Query: 2004 tcggtttaattcatgcttcacatggcgaggagatcatcgattatttagtggagaagttac 2063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2004 tcggtttaattcatgcttcacatggcgaggagatcatcgattatttagtggagaagttac 2063


Query: 2064 acatcaacaatgccatccttcatcatggtgcatccttgggtttgggtttggctgcaatgg 2123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2064 acatcaacaatgccatccttcatcatggtgcatccttgggtttgggtttggctgcaatgg 2123


Query: 2124 caacaggtcgtgatgatttgtatgaagatttgaaaagtgtgctctataacgatgacgccg 2183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2124 caacaggtcgtgatgatttgtatgaagatttgaaaagtgtgctctataacgatgacgccg 2183


Query: 2184 tctctggtgaggccgctggtttggctatgggtttggtgatgttgggcagtggcgcaaaga 2243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2184 tctctggtgaggccgctggtttggctatgggtttggtgatgttgggcagtggcgcaaaga 2243


Query: 2244 aggccatcgaagagatgttggcatatgctcatgagacccaacatgagaaaaccatcagat 2303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2244 aggccatcgaagagatgttggcatatgctcatgagacccaacatgagaaaaccatcagat 2303


Query: 2304 ccttatccatgggtttggcattcttaatgtatggcaaggaggagagtgccgacaccttga 2363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2304 ccttatccatgggtttggcattcttaatgtatggcaaggaggagagtgccgacaccttga 2363


Query: 2364 tcgagcaaatgattggtgacaaagatccattgattagatatggtggtatgtatgcaattg 2423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2364 tcgagcaaatgattggtgacaaagatccattgattagatatggtggtatgtatgcaattg 2423


Query: 2424 cctttgcttactgtggaactggtcacaatgatgccttgagaaaactcttacatgtcgccg 2483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2424 cctttgcttactgtggaactggtcacaatgatgccttgagaaaactcttacatgtcgccg 2483


Query: 2484 tctctgatggtaccgactctgttagaagagctgccgtcacttgtattggtttcgttttgt 2543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2484 tctctgatggtaccgactctgttagaagagctgccgtcacttgtattggtttcgttttgt 2543


Query: 2544 ccagacaaccagagaaatgtccaaaggcaatcgctttgttggccgaaagttataacccac 2603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2544 ccagacaaccagagaaatgtccaaaggcaatcgctttgttggccgaaagttataacccac 2603


Query: 2604 acgttcgttatggtgccgctttcgctttgggtattgcatgtgctggtaccggtcaaagag 2663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604 acgttcgttatggtgccgctttcgctttgggtattgcatgtgctggtaccggtcaaagag 2663


Query: 2664 atgctttggaaattttaaaatcactcaccaccgatagtgttggttacgttaaacaagccg 2723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2664 atgctttggaaattttaaaatcactcaccaccgatagtgttggttacgttaaacaagccg 2723


Query: 2724 cttggatctccatggctatggtattgattcaaaccagtaaagagttggtaccagaggctg 2783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2724 cttggatctccatggctatggtattgattcaaaccagtaaagagttggtaccagaggctg 2783


Query: 2784 aaaccgccagaaaattattcgccacttgtatcagtgataaacgtgaggattcaatgtcca 2843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2784 aaaccgccagaaaattattcgccacttgtatcagtgataaacgtgaggattcaatgtcca 2843


Query: 2844 agtttggtgctgtattagcatttggtgtcattgatgccggtggtagaaactctacccatt 2903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2844 agtttggtgctgtattagcatttggtgtcattgatgccggtggtagaaactctacccatt 2903


Query: 2904 caattacattcaccaagtggtcacaagaatatgaatgctatcgttggtattgctggtttc 2963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2904 caattacattcaccaagtggtcacaagaatatgaatgctatcgttggtattgctggtttc 2963


Query: 2964 cttcaattttggtattggttcccaatgactcactttatgggcttagcgttaactccaacc 3023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2964 cttcaattttggtattggttcccaatgactcactttatgggcttagcgttaactccaacc 3023


Query: 3024 tctatcattggtctcaacaaaaacttggaaatgccagttttcactttcaaatccaattgc 3083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3024 tctatcattggtctcaacaaaaacttggaaatgccagttttcactttcaaatccaattgc 3083


Query: 3084 agaccatcactctttgcttatccacctgaaaccaaaccatccaccacaagctcaaccaat 3143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3084 agaccatcactctttgcttatccacctgaaaccaaaccatccaccacaagctcaaccaat 3143


Query: 3144 aaaattgaaacagccatcctctcctacagtagaaagaataaacttcaaagttctcgttcc 3203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3144 aaaattgaaacagccatcctctcctacagtagaaagaataaacttcaaagttctcgttcc 3203


Query: 3204 gctatgaatattgatcaagatgtt 3227
||||||||||||||||||||||||
Sbjct: 3204 gctatgaatattgatcaagatgtt 3227


Score = 1677 bits (846), Expect = 0.0
Identities = 846/846 (100%)
Strand = Plus / Plus


Query: 175 cataattaaaatttcatacaatcatggtagcaattaattcagtttctaattacctatcat 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 cataattaaaatttcatacaatcatggtagcaattaattcagtttctaattacctatcat 234


Query: 235 tattggatgaagatcaattagaattgaaatcatattcattagaaaaattagattcatgtg 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tattggatgaagatcaattagaattgaaatcatattcattagaaaaattagattcatgtg 294


Query: 295 ttgatgaattttggtcagaaattgcatcatcttcaatcgataaaataaaatcattatcag 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttgatgaattttggtcagaaattgcatcatcttcaatcgataaaataaaatcattatcag 354


Query: 355 tcaataaacaatttccaaaacatgaacttgcatcattagttttatcaaaagtatattaca 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tcaataaacaatttccaaaacatgaacttgcatcattagttttatcaaaagtatattaca 414


Query: 415 atttaagtgatttcccaaattcaatggaatatgcgttatcagctggttctttatttaatg 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 atttaagtgatttcccaaattcaatggaatatgcgttatcagctggttctttatttaatg 474


Query: 475 ttttatcaaagagtgaatacattgaaacacttttatataaatttattgatgaatatatta 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ttttatcaaagagtgaatacattgaaacacttttatataaatttattgatgaatatatta 534


Query: 535 aattaagaacatccacaaataaagacactgttatcaatccacatctcgaatcaattgtaa 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aattaagaacatccacaaataaagacactgttatcaatccacatctcgaatcaattgtaa 594


Query: 595 tgggaatgtttgatagatgtttcaaggaaggatcatataaacaggcattaggtattgcta 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tgggaatgtttgatagatgtttcaaggaaggatcatataaacaggcattaggtattgcta 654


Query: 655 ttgaagcaagaagattagatataattgaaaaagcaatttcacaatctggtaatgtaaata 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ttgaagcaagaagattagatataattgaaaaagcaatttcacaatctggtaatgtaaata 714


Query: 715 gtatgctctcttattgtcttcacatttgtaatgtttcagtaaacaatcgtcatttccgtc 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gtatgctctcttattgtcttcacatttgtaatgtttcagtaaacaatcgtcatttccgtc 774


Query: 775 atagtgttttaggtattttggttaatcttcatttagcccaagaaaaaccagattatctta 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 atagtgttttaggtattttggttaatcttcatttagcccaagaaaaaccagattatctta 834


Query: 835 gtgttgttcaatgtttaatctttttagataaccatattgaagttgctacaattttattat 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 gtgttgttcaatgtttaatctttttagataaccatattgaagttgctacaattttattat 894


Query: 895 cattaattaaaaaagatgaagaatcattattacttgcatatcaaattggatttgatcttt 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 cattaattaaaaaagatgaagaatcattattacttgcatatcaaattggatttgatcttt 954


Query: 955 ttcaaaatagtacacaacaatttttattaaatgttcgtaatagattaccaccagttgaaa 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 ttcaaaatagtacacaacaatttttattaaatgttcgtaatagattaccaccagttgaaa 1014


Query: 1015 agaaat 1020
||||||
Sbjct: 1015 agaaat 1020


Score = 609 bits (307), Expect = e-173
Identities = 321/328 (97%)
Strand = Plus / Plus


Query: 3336 tcaaatcctgctcgtatcgtaccaagacaattacaatatgttcaatttgatgatgctcgt 3395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3336 tcaaatcctgctcgtatcgtaccaagacaattacaatatgttcaatttgatgatgctcgt 3395


Query: 3396 tatcaaccaattaaaaagagtcctgccattggtatcgttatgttgagagatttaactcca 3455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3396 tatcaaccaattaaaaagagtcctgccattggtatcgttatgttgagagatttaactcca 3455


Query: 3456 aatgaaccagaacaattggttgtaaaagaaaaaccagaaactaaacaagaaactgttgga 3515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3456 aatgaaccagaacaattggttgtaaaagaaaaaccagaaactaaacaagaaactgttgga 3515


Query: 3516 aatcaatctggtactgctactgctactgcttcacttccaaatgctaccactacaacttct 3575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3516 aatcaatctggtactgctactgctactgcttcacttccaaatgctaccactacaacttct 3575


Query: 3576 ccaactcttccagaaccttcaactccagaaccatttgaatttactgaataaaactctttt 3635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3576 ccaactcttccagaaccttcaactccagaaccatttgaatttactgaataaaactctttt 3635


Query: 3636 tatnnnnnnntttaataaatatataaaa 3663
||| ||||||||||||||||||
Sbjct: 3636 tataaaaaaatttaataaatatataaaa 3663


Score = 319 bits (161), Expect = 2e-86
Identities = 161/161 (100%)
Strand = Plus / Plus


Query: 1 cataaacggtgaatacctcgactcctaaatcgatgaagaccgtagcaaactgcgataatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cataaacggtgaatacctcgactcctaaatcgatgaagaccgtagcaaactgcgataatt 60


Query: 61 cacttgaattgcagcctactgggatagttgaaatgttgaacgcacatgatgacatcggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacttgaattgcagcctactgggatagttgaaatgttgaacgcacatgatgacatcggtc 120


Query: 121 ctttcggattaggtgttatacttgggtgagagtggtcacaa 161
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctttcggattaggtgttatacttgggtgagagtggtcacaa 161


>Contig-U11364-1 (Contig-U11364-1Q) /CSM_Contig/Contig-U11364-1Q.Seq.d
Length = 1387

Score = 317 bits (160), Expect = 7e-86
Identities = 160/160 (100%)
Strand = Plus / Plus


Query: 1 cataaacggtgaatacctcgactcctaaatcgatgaagaccgtagcaaactgcgataatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cataaacggtgaatacctcgactcctaaatcgatgaagaccgtagcaaactgcgataatt 60


Query: 61 cacttgaattgcagcctactgggatagttgaaatgttgaacgcacatgatgacatcggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacttgaattgcagcctactgggatagttgaaatgttgaacgcacatgatgacatcggtc 120


Query: 121 ctttcggattaggtgttatacttgggtgagagtggtcaca 160
||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctttcggattaggtgttatacttgggtgagagtggtcaca 160


>Contig-U13954-1 (Contig-U13954-1Q) /CSM_Contig/Contig-U13954-1Q.Seq.d
Length = 1263

Score = 315 bits (159), Expect = 3e-85
Identities = 159/159 (100%)
Strand = Plus / Plus


Query: 2 ataaacggtgaatacctcgactcctaaatcgatgaagaccgtagcaaactgcgataattc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaacggtgaatacctcgactcctaaatcgatgaagaccgtagcaaactgcgataattc 60


Query: 62 acttgaattgcagcctactgggatagttgaaatgttgaacgcacatgatgacatcggtcc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acttgaattgcagcctactgggatagttgaaatgttgaacgcacatgatgacatcggtcc 120


Query: 122 tttcggattaggtgttatacttgggtgagagtggtcaca 160
|||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttcggattaggtgttatacttgggtgagagtggtcaca 159


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 53,757
Number of Sequences: 8402
Number of extensions: 53757
Number of successful extensions: 5539
Number of sequences better than 10.0: 231
length of query: 3663
length of database: 8,075,542
effective HSP length: 17
effective length of query: 3646
effective length of database: 7,932,708
effective search space: 28922653368
effective search space used: 28922653368
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 4. 2
Homology vs DNA
Query= Contig-U16438-1 (Contig-U16438-1Q) /CSM_Contig/Contig-U16438-1Q.Seq.d
(3663 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU061946) Dictyostelium discoideum slug cDNA, clone SLG727. 1292 0.0 2
(AU061838) Dictyostelium discoideum slug cDNA, clone SLG282. 1292 0.0 2
(BJ334245) Dictyostelium discoideum cDNA clone:dda45k18, 5' ... 1285 0.0 1
(BJ371441) Dictyostelium discoideum cDNA clone:ddc58c03, 5' ... 1267 0.0 1
(BJ331018) Dictyostelium discoideum cDNA clone:dda33h18, 5' ... 1265 0.0 1
(BJ425771) Dictyostelium discoideum cDNA clone:ddv56e21, 5' ... 1263 0.0 1
(BJ395086) Dictyostelium discoideum cDNA clone:dds37h14, 5' ... 1263 0.0 1
(BJ427437) Dictyostelium discoideum cDNA clone:ddv62m09, 5' ... 1261 0.0 1
(BJ330896) Dictyostelium discoideum cDNA clone:dda33k06, 5' ... 1259 0.0 1
(BJ333814) Dictyostelium discoideum cDNA clone:dda44j06, 5' ... 1257 0.0 1
(BJ335240) Dictyostelium discoideum cDNA clone:dda49p08, 5' ... 1255 0.0 1
(BJ334973) Dictyostelium discoideum cDNA clone:dda48p11, 5' ... 1255 0.0 1
(BJ424484) Dictyostelium discoideum cDNA clone:ddv52h13, 5' ... 1249 0.0 1
(BJ391806) Dictyostelium discoideum cDNA clone:dds25c11, 5' ... 1249 0.0 1
(BJ334048) Dictyostelium discoideum cDNA clone:dda44n24, 5' ... 1249 0.0 1
(BJ335113) Dictyostelium discoideum cDNA clone:dda49a06, 5' ... 1233 0.0 1
(BJ333989) Dictyostelium discoideum cDNA clone:dda44a22, 5' ... 1229 0.0 1
(BJ393881) Dictyostelium discoideum cDNA clone:dds32p21, 5' ... 1221 0.0 1
(BJ423639) Dictyostelium discoideum cDNA clone:ddv49l23, 5' ... 1219 0.0 1
(BJ336419) Dictyostelium discoideum cDNA clone:dda53h23, 5' ... 1217 0.0 1
(BJ421743) Dictyostelium discoideum cDNA clone:ddv43n15, 5' ... 1215 0.0 1
(BJ419929) Dictyostelium discoideum cDNA clone:ddv37m16, 5' ... 1215 0.0 1
(BJ391516) Dictyostelium discoideum cDNA clone:dds24o06, 5' ... 1215 0.0 1
(BJ339286) Dictyostelium discoideum cDNA clone:dda64f19, 5' ... 1213 0.0 1
(BJ338093) Dictyostelium discoideum cDNA clone:dda60f04, 5' ... 1213 0.0 1
(BJ334182) Dictyostelium discoideum cDNA clone:dda45m12, 5' ... 1213 0.0 1
(BJ423695) Dictyostelium discoideum cDNA clone:ddv50h06, 5' ... 1211 0.0 1
(BJ395015) Dictyostelium discoideum cDNA clone:dds37h12, 5' ... 1211 0.0 1
(BJ393696) Dictyostelium discoideum cDNA clone:dds32c10, 5' ... 1211 0.0 1
(BJ338978) Dictyostelium discoideum cDNA clone:dda63o16, 5' ... 1211 0.0 1
(BJ336557) Dictyostelium discoideum cDNA clone:dda54g10, 5' ... 1211 0.0 1
(BJ335792) Dictyostelium discoideum cDNA clone:dda51g13, 5' ... 1211 0.0 1
(BJ333789) Dictyostelium discoideum cDNA clone:dda44d04, 5' ... 1211 0.0 1
(BJ332907) Dictyostelium discoideum cDNA clone:dda40e11, 5' ... 1211 0.0 1
(BJ332585) Dictyostelium discoideum cDNA clone:dda39j18, 5' ... 1211 0.0 1
(BJ331834) Dictyostelium discoideum cDNA clone:dda37b12, 5' ... 1211 0.0 1
(BJ330954) Dictyostelium discoideum cDNA clone:dda33h12, 5' ... 1211 0.0 1
(BJ391777) Dictyostelium discoideum cDNA clone:dds25m02, 5' ... 1209 0.0 1
(BJ337651) Dictyostelium discoideum cDNA clone:dda58a07, 5' ... 1209 0.0 1
(BJ335683) Dictyostelium discoideum cDNA clone:dda51n01, 5' ... 1209 0.0 1
(BJ332590) Dictyostelium discoideum cDNA clone:dda39k17, 5' ... 1209 0.0 1
(BJ332343) Dictyostelium discoideum cDNA clone:dda38e20, 5' ... 1209 0.0 1
(BJ332020) Dictyostelium discoideum cDNA clone:dda37m23, 5' ... 1209 0.0 1
(BJ331117) Dictyostelium discoideum cDNA clone:dda33n24, 5' ... 1209 0.0 1
(BJ427827) Dictyostelium discoideum cDNA clone:ddv63a20, 5' ... 1207 0.0 1
(BJ424336) Dictyostelium discoideum cDNA clone:ddv52j04, 5' ... 1207 0.0 1
(BJ336013) Dictyostelium discoideum cDNA clone:dda52m07, 5' ... 1207 0.0 1
(BJ337238) Dictyostelium discoideum cDNA clone:dda56a24, 5' ... 1205 0.0 1
(BJ336420) Dictyostelium discoideum cDNA clone:dda53h24, 5' ... 1205 0.0 1
(BJ336345) Dictyostelium discoideum cDNA clone:dda53g16, 5' ... 1205 0.0 1
(BJ335824) Dictyostelium discoideum cDNA clone:dda51n17, 5' ... 1205 0.0 1
(BJ331038) Dictyostelium discoideum cDNA clone:dda33m14, 5' ... 1205 0.0 1
(BJ423370) Dictyostelium discoideum cDNA clone:ddv48p19, 5' ... 1203 0.0 1
(BJ422362) Dictyostelium discoideum cDNA clone:ddv45m18, 5' ... 1203 0.0 1
(BJ332510) Dictyostelium discoideum cDNA clone:dda39j07, 5' ... 1203 0.0 1
(BJ331845) Dictyostelium discoideum cDNA clone:dda37d11, 5' ... 1203 0.0 1
(BJ337848) Dictyostelium discoideum cDNA clone:dda59n06, 5' ... 1201 0.0 1
(BJ332048) Dictyostelium discoideum cDNA clone:dda37c03, 5' ... 1201 0.0 1
(BJ420846) Dictyostelium discoideum cDNA clone:ddv40j18, 5' ... 1199 0.0 1
(BJ337291) Dictyostelium discoideum cDNA clone:dda56m23, 5' ... 1199 0.0 1
(BJ332963) Dictyostelium discoideum cDNA clone:dda41b03, 5' ... 1199 0.0 1
(BJ395236) Dictyostelium discoideum cDNA clone:dds38j02, 5' ... 1197 0.0 1
(BJ333031) Dictyostelium discoideum cDNA clone:dda41a10, 5' ... 1197 0.0 2
(BJ397541) Dictyostelium discoideum cDNA clone:dds46n16, 5' ... 1195 0.0 1
(BJ330665) Dictyostelium discoideum cDNA clone:dda32h07, 5' ... 1195 0.0 1
(BJ425603) Dictyostelium discoideum cDNA clone:ddv56c10, 5' ... 1193 0.0 1
(BJ424401) Dictyostelium discoideum cDNA clone:ddv52f12, 5' ... 1193 0.0 1
(BJ424994) Dictyostelium discoideum cDNA clone:ddv54c12, 5' ... 1191 0.0 2
(BJ422414) Dictyostelium discoideum cDNA clone:ddv45h21, 5' ... 1191 0.0 1
(BJ393517) Dictyostelium discoideum cDNA clone:dds31i13, 5' ... 1191 0.0 1
(BJ331422) Dictyostelium discoideum cDNA clone:dda35e12, 5' ... 1189 0.0 1
(BJ426621) Dictyostelium discoideum cDNA clone:ddv59k18, 5' ... 1187 0.0 1
(BJ426221) Dictyostelium discoideum cDNA clone:ddv58d12, 5' ... 1179 0.0 1
(BJ331293) Dictyostelium discoideum cDNA clone:dda34a21, 5' ... 1158 0.0 2
(BJ426298) Dictyostelium discoideum cDNA clone:ddv58c17, 5' ... 1152 0.0 1
(BJ420655) Dictyostelium discoideum cDNA clone:ddv40c01, 5' ... 1150 0.0 1
(BJ334165) Dictyostelium discoideum cDNA clone:dda45j09, 5' ... 1144 0.0 1
(BJ338796) Dictyostelium discoideum cDNA clone:dda63h01, 5' ... 1136 0.0 1
(BJ338140) Dictyostelium discoideum cDNA clone:dda60b10, 5' ... 1136 0.0 2
(BJ331078) Dictyostelium discoideum cDNA clone:dda33g19, 5' ... 1130 0.0 1
(BJ423217) Dictyostelium discoideum cDNA clone:ddv48o09, 5' ... 1124 0.0 1
(BJ422464) Dictyostelium discoideum cDNA clone:ddv46b04, 5' ... 1124 0.0 1
(BJ335644) Dictyostelium discoideum cDNA clone:dda51g01, 5' ... 1118 0.0 1
(BJ422975) Dictyostelium discoideum cDNA clone:ddv47l18, 5' ... 1112 0.0 1
(BJ391911) Dictyostelium discoideum cDNA clone:dds25m13, 5' ... 1106 0.0 1
(BJ333550) Dictyostelium discoideum cDNA clone:dda43l01, 5' ... 1106 0.0 1
(BJ337106) Dictyostelium discoideum cDNA clone:dda56d08, 5' ... 1100 0.0 1
(BJ336853) Dictyostelium discoideum cDNA clone:dda55k08, 5' ... 1100 0.0 1
(BJ332491) Dictyostelium discoideum cDNA clone:dda39f07, 5' ... 1092 0.0 1
(BJ330239) Dictyostelium discoideum cDNA clone:dda27h22, 5' ... 1088 0.0 1
(BJ331493) Dictyostelium discoideum cDNA clone:dda35j13, 5' ... 1080 0.0 2
(BJ421672) Dictyostelium discoideum cDNA clone:ddv43o11, 5' ... 999 0.0 2
(BJ357484) Dictyostelium discoideum cDNA clone:dda63o16, 3' ... 896 0.0 2
(BJ352035) Dictyostelium discoideum cDNA clone:dda45m12, 3' ... 896 0.0 2
(BJ339138) Dictyostelium discoideum cDNA clone:dda64d10, 5' ... 880 0.0 2
(BJ403482) Dictyostelium discoideum cDNA clone:dds25c11, 3' ... 856 0.0 2
(BJ441206) Dictyostelium discoideum cDNA clone:ddv46b04, 3' ... 854 0.0 2
(BJ403601) Dictyostelium discoideum cDNA clone:dds25m13, 3' ... 842 0.0 2
(BJ442615) Dictyostelium discoideum cDNA clone:ddv50o08, 3' ... 839 0.0 2
(BJ350376) Dictyostelium discoideum cDNA clone:dda39k17, 3' ... 823 0.0 2
(BJ353943) Dictyostelium discoideum cDNA clone:dda52a06, 3' ... 821 0.0 2
(BJ353414) Dictyostelium discoideum cDNA clone:dda50i01, 3' ... 813 0.0 4
(BJ349874) Dictyostelium discoideum cDNA clone:dda37m23, 3' ... 813 0.0 2
(BJ444571) Dictyostelium discoideum cDNA clone:ddv56e21, 3' ... 805 0.0 5
(BJ352249) Dictyostelium discoideum cDNA clone:dda46k03, 3' ... 773 0.0 2
(BJ349458) Dictyostelium discoideum cDNA clone:dda36e18, 3' ... 773 0.0 2
(BJ349073) Dictyostelium discoideum cDNA clone:dda35e12, 3' ... 773 0.0 2
(BJ441980) Dictyostelium discoideum cDNA clone:ddv48o09, 3' ... 771 0.0 2
(BJ353241) Dictyostelium discoideum cDNA clone:dda49p08, 3' ... 771 0.0 2
(BJ349664) Dictyostelium discoideum cDNA clone:dda37b12, 3' ... 771 0.0 2
(BJ353578) Dictyostelium discoideum cDNA clone:dda50p16, 3' ... 767 0.0 5
(BJ442449) Dictyostelium discoideum cDNA clone:ddv49l23, 3' ... 765 0.0 2
(BJ438354) Dictyostelium discoideum cDNA clone:ddv37m16, 3' ... 763 0.0 2
(BJ420689) Dictyostelium discoideum cDNA clone:ddv40j01, 5' ... 761 0.0 2
(BJ350371) Dictyostelium discoideum cDNA clone:dda39j18, 3' ... 761 0.0 2
(BJ446341) Dictyostelium discoideum cDNA clone:ddv62m09, 3' ... 749 0.0 3
(BJ391479) Dictyostelium discoideum cDNA clone:dds24f06, 5' ... 735 0.0 2
(BJ446751) Dictyostelium discoideum cDNA clone:ddv63a20, 3' ... 714 0.0 2
(BJ442508) Dictyostelium discoideum cDNA clone:ddv50h06, 3' ... 712 0.0 2
(BJ353566) Dictyostelium discoideum cDNA clone:dda50m15, 3' ... 712 0.0 3
(BJ349598) Dictyostelium discoideum cDNA clone:dda37c03, 3' ... 712 0.0 2
(BJ443237) Dictyostelium discoideum cDNA clone:ddv52f12, 3' ... 710 0.0 2
(BJ403146) Dictyostelium discoideum cDNA clone:dds24o06, 3' ... 706 0.0 2
(BJ443173) Dictyostelium discoideum cDNA clone:ddv52j04, 3' ... 704 0.0 2
(BJ348625) Dictyostelium discoideum cDNA clone:dda33g19, 3' ... 704 0.0 2
(BJ445499) Dictyostelium discoideum cDNA clone:ddv59k18, 3' ... 700 0.0 2
(BJ422886) Dictyostelium discoideum cDNA clone:ddv47i10, 5' ... 696 0.0 2
(BJ350564) Dictyostelium discoideum cDNA clone:dda40e11, 3' ... 690 0.0 3
(BJ353678) Dictyostelium discoideum cDNA clone:dda51g01, 3' ... 666 0.0 2
(BJ441730) Dictyostelium discoideum cDNA clone:ddv47l18, 3' ... 656 0.0 3
(BJ352016) Dictyostelium discoideum cDNA clone:dda45j09, 3' ... 654 0.0 2
(BJ444401) Dictyostelium discoideum cDNA clone:ddv56c10, 3' ... 652 0.0 2
(BJ441640) Dictyostelium discoideum cDNA clone:ddv47i10, 3' ... 652 0.0 3
(BJ438620) Dictyostelium discoideum cDNA clone:ddv38a04, 3' ... 652 0.0 3
(BJ408708) Dictyostelium discoideum cDNA clone:dds46n16, 3' ... 652 0.0 3
(BJ407139) Dictyostelium discoideum cDNA clone:dds37h14, 3' ... 652 0.0 3
(BJ403449) Dictyostelium discoideum cDNA clone:dds25m02, 3' ... 652 0.0 4
(BJ403104) Dictyostelium discoideum cDNA clone:dds24f06, 3' ... 652 0.0 3
(BJ358301) Dictyostelium discoideum cDNA clone:dda56m23, 3' ... 652 0.0 3
(BJ356079) Dictyostelium discoideum cDNA clone:dda59m06, 3' ... 652 0.0 3
(BJ355429) Dictyostelium discoideum cDNA clone:dda57e04, 3' ... 652 0.0 3
(BJ355270) Dictyostelium discoideum cDNA clone:dda56d08, 3' ... 652 0.0 4
(BJ354990) Dictyostelium discoideum cDNA clone:dda55k08, 3' ... 652 0.0 3
(BJ354656) Dictyostelium discoideum cDNA clone:dda54g10, 3' ... 652 0.0 2
(BJ354508) Dictyostelium discoideum cDNA clone:dda53h23, 3' ... 652 0.0 3
(BJ354425) Dictyostelium discoideum cDNA clone:dda53g16, 3' ... 652 0.0 3
(BJ353099) Dictyostelium discoideum cDNA clone:dda49a06, 3' ... 652 0.0 3
(BJ352425) Dictyostelium discoideum cDNA clone:dda46o17, 3' ... 652 0.0 3
(BJ350854) Dictyostelium discoideum cDNA clone:dda41a10, 3' ... 652 0.0 4
(BJ350777) Dictyostelium discoideum cDNA clone:dda41b03, 3' ... 652 0.0 3
(BJ350293) Dictyostelium discoideum cDNA clone:dda39j07, 3' ... 652 0.0 4
(BJ349673) Dictyostelium discoideum cDNA clone:dda37d11, 3' ... 652 0.0 2
(BJ348576) Dictyostelium discoideum cDNA clone:dda33m14, 3' ... 652 0.0 2
(BJ347079) Dictyostelium discoideum cDNA clone:dda26e04, 3' ... 652 0.0 3
(BJ341462) Dictyostelium discoideum cDNA clone:dda6b22, 3' e... 652 0.0 2
(BJ357296) Dictyostelium discoideum cDNA clone:dda63h01, 3' ... 650 0.0 2
(BJ348901) Dictyostelium discoideum cDNA clone:dda34a21, 3' ... 648 0.0 3
(BJ386372) Dictyostelium discoideum cDNA clone:ddc58c03, 3' ... 646 0.0 3
(BJ348412) Dictyostelium discoideum cDNA clone:dda33k06, 3' ... 646 0.0 4
(BJ357423) Dictyostelium discoideum cDNA clone:dda63c17, 3' ... 640 0.0 4
(BJ443325) Dictyostelium discoideum cDNA clone:ddv52h13, 3' ... 626 0.0 2
(BJ350272) Dictyostelium discoideum cDNA clone:dda39f07, 3' ... 626 0.0 3
(BJ351827) Dictyostelium discoideum cDNA clone:dda44a22, 3' ... 624 0.0 2
(BJ408885) Dictyostelium discoideum cDNA clone:dds47e08, 3' ... 618 0.0 4
(BJ356853) Dictyostelium discoideum cDNA clone:dda61l17, 3' ... 613 0.0 2
(BJ356683) Dictyostelium discoideum cDNA clone:dda61j02, 3' ... 613 0.0 2
(BJ356644) Dictyostelium discoideum cDNA clone:dda61a03, 3' ... 613 0.0 2
(BJ354067) Dictyostelium discoideum cDNA clone:dda52m07, 3' ... 613 0.0 2
(BJ439332) Dictyostelium discoideum cDNA clone:ddv40j01, 3' ... 609 0.0 2
(BJ405780) Dictyostelium discoideum cDNA clone:dds32p21, 3' ... 607 0.0 2
(BJ387716) Dictyostelium discoideum cDNA clone:dds4n10, 5' e... 563 0.0 2
(BJ348553) Dictyostelium discoideum cDNA clone:dda33h18, 3' ... 591 0.0 3
(BJ352364) Dictyostelium discoideum cDNA clone:dda46c15, 3' ... 585 0.0 3
(BJ329719) Dictyostelium discoideum cDNA clone:dda26e04, 5' ... 1072 0.0 1
(BJ356685) Dictyostelium discoideum cDNA clone:dda61j05, 3' ... 611 0.0 2
(BJ348665) Dictyostelium discoideum cDNA clone:dda33n24, 3' ... 569 0.0 2
(BJ335562) Dictyostelium discoideum cDNA clone:dda50p16, 5' ... 1013 0.0 2
(BJ335408) Dictyostelium discoideum cDNA clone:dda50i01, 5' ... 1066 0.0 1
(BJ351892) Dictyostelium discoideum cDNA clone:dda44n24, 3' ... 605 0.0 2
(BJ357088) Dictyostelium discoideum cDNA clone:dda62m08, 3' ... 613 0.0 2
(BJ331803) Dictyostelium discoideum cDNA clone:dda36j05, 5' ... 1063 0.0 1
(BJ357094) Dictyostelium discoideum cDNA clone:dda62n08, 3' ... 613 0.0 2
(BJ340799) Dictyostelium discoideum cDNA clone:dda3l23, 3' e... 553 0.0 3
(BJ358238) Dictyostelium discoideum cDNA clone:dda56a24, 3' ... 569 0.0 3
(BJ356413) Dictyostelium discoideum cDNA clone:dda60a10, 3' ... 601 0.0 2
(BJ356223) Dictyostelium discoideum cDNA clone:dda59l13, 3' ... 575 0.0 2
(BJ442141) Dictyostelium discoideum cDNA clone:ddv48p19, 3' ... 559 0.0 3
(BJ445126) Dictyostelium discoideum cDNA clone:ddv58c17, 3' ... 553 0.0 4
(BJ405411) Dictyostelium discoideum cDNA clone:dds31h16, 3' ... 650 0.0 2
(BJ335552) Dictyostelium discoideum cDNA clone:dda50m15, 5' ... 1049 0.0 1
(BJ354509) Dictyostelium discoideum cDNA clone:dda53h24, 3' ... 553 0.0 2
(BJ349168) Dictyostelium discoideum cDNA clone:dda35j13, 3' ... 553 0.0 3
(BJ439489) Dictyostelium discoideum cDNA clone:ddv40j18, 3' ... 549 0.0 2
(BJ347684) Dictyostelium discoideum cDNA clone:dda27h22, 3' ... 535 0.0 2
(BJ352949) Dictyostelium discoideum cDNA clone:dda48p11, 3' ... 535 0.0 2
(BJ352472) Dictyostelium discoideum cDNA clone:dda46j19, 3' ... 535 0.0 2
(BJ353867) Dictyostelium discoideum cDNA clone:dda51n17, 3' ... 545 0.0 2
(BJ445051) Dictyostelium discoideum cDNA clone:ddv58d12, 3' ... 523 0.0 3
(BJ351606) Dictyostelium discoideum cDNA clone:dda44d04, 3' ... 613 0.0 2
(BJ357816) Dictyostelium discoideum cDNA clone:dda64e22, 3' ... 535 0.0 3
(BJ348474) Dictyostelium discoideum cDNA clone:dda33h12, 3' ... 646 0.0 2
(BJ348150) Dictyostelium discoideum cDNA clone:dda32h07, 3' ... 569 0.0 3
(AU039732) Dictyostelium discoideum slug cDNA, clone SLG281. 591 0.0 3
(AU039911) Dictyostelium discoideum slug cDNA, clone SLG727. 591 0.0 3
(BJ355793) Dictyostelium discoideum cDNA clone:dda58a07, 3' ... 605 0.0 3
(BJ420024) Dictyostelium discoideum cDNA clone:ddv38a04, 5' ... 622 0.0 2
(BJ387715) Dictyostelium discoideum cDNA clone:dds4m08, 5' e... 995 0.0 1
(BJ337326) Dictyostelium discoideum cDNA clone:dda57e04, 5' ... 977 0.0 1
(BJ423798) Dictyostelium discoideum cDNA clone:ddv50o08, 5' ... 971 0.0 1
(BJ339285) Dictyostelium discoideum cDNA clone:dda64e22, 5' ... 971 0.0 1
(BJ335351) Dictyostelium discoideum cDNA clone:dda49j20, 5' ... 969 0.0 1
(BJ335905) Dictyostelium discoideum cDNA clone:dda52a06, 5' ... 965 0.0 1
(BJ356350) Dictyostelium discoideum cDNA clone:dda60e04, 3' ... 569 0.0 2
(BJ440434) Dictyostelium discoideum cDNA clone:ddv43n15, 3' ... 553 0.0 2
(BJ405414) Dictyostelium discoideum cDNA clone:dds31i13, 3' ... 553 0.0 3
(BJ407063) Dictyostelium discoideum cDNA clone:dds37h12, 3' ... 553 0.0 2
(BJ399152) Dictyostelium discoideum cDNA clone:dds4m08, 3' e... 585 0.0 2
(BJ397706) Dictyostelium discoideum cDNA clone:dds47e08, 5' ... 934 0.0 1
(BJ352104) Dictyostelium discoideum cDNA clone:dda45k18, 3' ... 644 0.0 2
(BJ324532) Dictyostelium discoideum cDNA clone:dda6b22, 5' e... 924 0.0 1
(BJ334547) Dictyostelium discoideum cDNA clone:dda46j19, 5' ... 916 0.0 1
(BJ331659) Dictyostelium discoideum cDNA clone:dda36e18, 5' ... 912 0.0 1
(BJ351634) Dictyostelium discoideum cDNA clone:dda44j06, 3' ... 553 0.0 2
(BJ441158) Dictyostelium discoideum cDNA clone:ddv45h21, 3' ... 553 0.0 4
(BJ440364) Dictyostelium discoideum cDNA clone:ddv43o11, 3' ... 553 0.0 3
(BJ441102) Dictyostelium discoideum cDNA clone:ddv45m18, 3' ... 569 0.0 2
(BJ358215) Dictyostelium discoideum cDNA clone:dda43l01, 3' ... 535 0.0 2
(BJ338472) Dictyostelium discoideum cDNA clone:dda61l17, 5' ... 821 0.0 2
(BJ338649) Dictyostelium discoideum cDNA clone:dda62n08, 5' ... 797 0.0 2
(AU271344) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 591 0.0 2
(BJ338644) Dictyostelium discoideum cDNA clone:dda62m08, 5' ... 761 0.0 2
(BJ439296) Dictyostelium discoideum cDNA clone:ddv40c01, 3' ... 400 0.0 2
(BJ418091) Dictyostelium discoideum cDNA clone:ddv31j17, 5' ... 745 0.0 1
(BJ333664) Dictyostelium discoideum cDNA clone:dda43e17, 5' ... 640 0.0 2
(BJ326094) Dictyostelium discoideum cDNA clone:dda3l23, 5' e... 731 0.0 1
(BJ350484) Dictyostelium discoideum cDNA clone:dda40c03, 3' ... 571 0.0 2
(BJ337993) Dictyostelium discoideum cDNA clone:dda59o13, 5' ... 724 0.0 1
(BJ357818) Dictyostelium discoideum cDNA clone:dda64f19, 3' ... 285 0.0 7
(BJ407302) Dictyostelium discoideum cDNA clone:dds38j02, 3' ... 513 0.0 2
(BJ351465) Dictyostelium discoideum cDNA clone:dda43e17, 3' ... 341 0.0 2
(BJ407132) Dictyostelium discoideum cDNA clone:dds37g13, 3' ... 557 e-171 2
(BJ353342) Dictyostelium discoideum cDNA clone:dda49f23, 3' ... 603 e-167 1
(BJ358294) Dictyostelium discoideum cDNA clone:dda56l21, 3' ... 359 e-154 2
(BJ436590) Dictyostelium discoideum cDNA clone:ddv31j17, 3' ... 517 e-142 1
(BJ334381) Dictyostelium discoideum cDNA clone:dda46k03, 5' ... 440 e-118 1
(BJ332704) Dictyostelium discoideum cDNA clone:dda40e18, 5' ... 416 e-118 2
(BJ427644) Dictyostelium discoideum cDNA clone:ddv63i05, 5' ... 246 e-114 2
(BJ334511) Dictyostelium discoideum cDNA clone:dda46o17, 5' ... 406 e-108 1
(BJ334462) Dictyostelium discoideum cDNA clone:dda46c15, 5' ... 367 2e-96 1
(BJ338924) Dictyostelium discoideum cDNA clone:dda63c17, 5' ... 359 5e-94 1
(BJ335333) Dictyostelium discoideum cDNA clone:dda49f23, 5' ... 351 1e-91 1
(BJ338361) Dictyostelium discoideum cDNA clone:dda61j05, 5' ... 329 4e-85 1
(BJ353357) Dictyostelium discoideum cDNA clone:dda49j20, 3' ... 151 2e-82 5
(BJ334117) Dictyostelium discoideum cDNA clone:dda45o01, 5' ... 317 2e-81 1
(BJ363795) Dictyostelium discoideum cDNA clone:ddc28f17, 5' ... 311 2e-81 2
(BJ423422) Dictyostelium discoideum cDNA clone:ddv49k06, 5' ... 315 7e-81 1
(BJ391233) Dictyostelium discoideum cDNA clone:dds15a19, 5' ... 315 7e-81 1
(BJ387510) Dictyostelium discoideum cDNA clone:dds3f03, 5' e... 315 7e-81 1
(BJ332644) Dictyostelium discoideum cDNA clone:dda39g21, 5' ... 315 7e-81 1
(BJ422943) Dictyostelium discoideum cDNA clone:ddv47e17, 5' ... 313 3e-80 1
(BJ422613) Dictyostelium discoideum cDNA clone:ddv46c13, 5' ... 313 3e-80 1
(BJ422180) Dictyostelium discoideum cDNA clone:ddv45j03, 5' ... 313 3e-80 1
(BJ421666) Dictyostelium discoideum cDNA clone:ddv43n11, 5' ... 313 3e-80 1
(BJ419855) Dictyostelium discoideum cDNA clone:ddv37n09, 5' ... 313 3e-80 1
(BJ417250) Dictyostelium discoideum cDNA clone:ddv30a05, 5' ... 313 3e-80 1
(BJ416539) Dictyostelium discoideum cDNA clone:ddv26b19, 5' ... 313 3e-80 1
(BJ415397) Dictyostelium discoideum cDNA clone:ddv22n12, 5' ... 313 3e-80 1
(BJ413550) Dictyostelium discoideum cDNA clone:ddv16n01, 5' ... 313 3e-80 1
(BJ411494) Dictyostelium discoideum cDNA clone:ddv4l18, 5' e... 313 3e-80 1
(BJ411375) Dictyostelium discoideum cDNA clone:ddv4l06, 5' e... 313 3e-80 1
(BJ410963) Dictyostelium discoideum cDNA clone:ddv2b17, 5' e... 313 3e-80 1
(BJ396385) Dictyostelium discoideum cDNA clone:dds42b20, 5' ... 313 3e-80 1
(BJ395940) Dictyostelium discoideum cDNA clone:dds40b24, 5' ... 313 3e-80 1
(BJ395747) Dictyostelium discoideum cDNA clone:dds40c03, 5' ... 313 3e-80 1
(BJ394340) Dictyostelium discoideum cDNA clone:dds34a22, 5' ... 313 3e-80 1
(BJ393355) Dictyostelium discoideum cDNA clone:dds31d05, 5' ... 313 3e-80 1
(BJ393272) Dictyostelium discoideum cDNA clone:dds30b21, 5' ... 313 3e-80 1
(BJ393212) Dictyostelium discoideum cDNA clone:dds30d13, 5' ... 313 3e-80 1
(BJ391015) Dictyostelium discoideum cDNA clone:dds14m15, 5' ... 313 3e-80 1
(BJ390424) Dictyostelium discoideum cDNA clone:dds22j10, 5' ... 313 3e-80 1
(BJ390304) Dictyostelium discoideum cDNA clone:dds21n19, 5' ... 313 3e-80 1
(BJ388083) Dictyostelium discoideum cDNA clone:dds7f24, 5' e... 313 3e-80 1
(BJ387961) Dictyostelium discoideum cDNA clone:dds7k02, 5' e... 313 3e-80 1
(BJ370451) Dictyostelium discoideum cDNA clone:ddc54n02, 5' ... 313 3e-80 1
(BJ369688) Dictyostelium discoideum cDNA clone:ddc51m09, 5' ... 313 3e-80 1
(BJ368554) Dictyostelium discoideum cDNA clone:ddc47n02, 5' ... 313 3e-80 1
(BJ367373) Dictyostelium discoideum cDNA clone:ddc42p12, 5' ... 313 3e-80 1
(BJ363762) Dictyostelium discoideum cDNA clone:ddc28j12, 5' ... 313 3e-80 1
(BJ363632) Dictyostelium discoideum cDNA clone:ddc27m13, 5' ... 313 3e-80 1
(BJ362902) Dictyostelium discoideum cDNA clone:ddc24a01, 5' ... 313 3e-80 1
(BJ361530) Dictyostelium discoideum cDNA clone:ddc17f17, 5' ... 313 3e-80 1
(BJ361142) Dictyostelium discoideum cDNA clone:ddc9f04, 5' e... 313 3e-80 1
(BJ360612) Dictyostelium discoideum cDNA clone:ddc7a02, 5' e... 313 3e-80 1
(BJ359760) Dictyostelium discoideum cDNA clone:ddc2k09, 5' e... 313 3e-80 1
(BJ358858) Dictyostelium discoideum cDNA clone:ddc11m13, 5' ... 313 3e-80 1
(BJ358551) Dictyostelium discoideum cDNA clone:ddc10i06, 5' ... 313 3e-80 1
(BJ351734) Dictyostelium discoideum cDNA clone:dda44n09, 3' ... 313 3e-80 1
(BJ338443) Dictyostelium discoideum cDNA clone:dda61e16, 5' ... 313 3e-80 1
(BJ338338) Dictyostelium discoideum cDNA clone:dda61a03, 5' ... 313 3e-80 1
(BJ338142) Dictyostelium discoideum cDNA clone:dda60c07, 5' ... 313 3e-80 1
(BJ334179) Dictyostelium discoideum cDNA clone:dda45m09, 5' ... 313 3e-80 1
(BJ333899) Dictyostelium discoideum cDNA clone:dda44n09, 5' ... 313 3e-80 1
(BJ333892) Dictyostelium discoideum cDNA clone:dda44l10, 5' ... 313 3e-80 1
(BJ333576) Dictyostelium discoideum cDNA clone:dda43a09, 5' ... 313 3e-80 1
(BJ333022) Dictyostelium discoideum cDNA clone:dda41o05, 5' ... 313 3e-80 1
(BJ332764) Dictyostelium discoideum cDNA clone:dda40b22, 5' ... 313 3e-80 1
(BJ332414) Dictyostelium discoideum cDNA clone:dda39d01, 5' ... 313 3e-80 1
(BJ332389) Dictyostelium discoideum cDNA clone:dda38n24, 5' ... 313 3e-80 1
(BJ332097) Dictyostelium discoideum cDNA clone:dda37p02, 5' ... 313 3e-80 1
(BJ331711) Dictyostelium discoideum cDNA clone:dda36c21, 5' ... 313 3e-80 1
(BJ331689) Dictyostelium discoideum cDNA clone:dda36l18, 5' ... 313 3e-80 1
(BJ327434) Dictyostelium discoideum cDNA clone:dda20n07, 5' ... 313 3e-80 1
(BJ324600) Dictyostelium discoideum cDNA clone:dda7h01, 5' e... 313 3e-80 1
(BJ323878) Dictyostelium discoideum cDNA clone:dda12n17, 5' ... 313 3e-80 1
(BJ336003) Dictyostelium discoideum cDNA clone:dda52i09, 5' ... 311 7e-80 2
(X00601) Dictyostelium discoideum ribosomal RNA gene. 311 1e-79 1
(AY171066) Dictyostelium discoideum extrachromosomal palindr... 311 1e-79 1
(AU272380) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 311 1e-79 1
(BJ445649) Dictyostelium discoideum cDNA clone:ddv60n02, 3' ... 311 1e-79 1
(BJ427062) Dictyostelium discoideum cDNA clone:ddv61l04, 5' ... 311 1e-79 1
(BJ426767) Dictyostelium discoideum cDNA clone:ddv60n02, 5' ... 311 1e-79 1
(BJ425283) Dictyostelium discoideum cDNA clone:ddv55a10, 5' ... 311 1e-79 1
(BJ425067) Dictyostelium discoideum cDNA clone:ddv54c18, 5' ... 311 1e-79 1
(BJ424674) Dictyostelium discoideum cDNA clone:ddv53n05, 5' ... 311 1e-79 1
(BJ424211) Dictyostelium discoideum cDNA clone:ddv51b20, 5' ... 311 1e-79 1
(BJ423783) Dictyostelium discoideum cDNA clone:ddv50l08, 5' ... 311 1e-79 1
(BJ421169) Dictyostelium discoideum cDNA clone:ddv41o19, 5' ... 311 1e-79 1
(BJ421147) Dictyostelium discoideum cDNA clone:ddv41j20, 5' ... 311 1e-79 1
(BJ420688) Dictyostelium discoideum cDNA clone:ddv40i06, 5' ... 311 1e-79 1
(BJ420013) Dictyostelium discoideum cDNA clone:ddv37o21, 5' ... 311 1e-79 1
(BJ419963) Dictyostelium discoideum cDNA clone:ddv37d20, 5' ... 311 1e-79 1
(BJ419549) Dictyostelium discoideum cDNA clone:ddv36o07, 5' ... 311 1e-79 1
(BJ418679) Dictyostelium discoideum cDNA clone:ddv33j16, 5' ... 311 1e-79 1
(BJ418605) Dictyostelium discoideum cDNA clone:ddv33k08, 5' ... 311 1e-79 1
(BJ418236) Dictyostelium discoideum cDNA clone:ddv32h05, 5' ... 311 1e-79 1
(BJ415820) Dictyostelium discoideum cDNA clone:ddv23i19, 5' ... 311 1e-79 1
(BJ415357) Dictyostelium discoideum cDNA clone:ddv22f09, 5' ... 311 1e-79 1
(BJ414970) Dictyostelium discoideum cDNA clone:ddv21d04, 5' ... 311 1e-79 1
(BJ413988) Dictyostelium discoideum cDNA clone:ddv17l18, 5' ... 311 1e-79 1
(BJ413105) Dictyostelium discoideum cDNA clone:ddv14n06, 5' ... 311 1e-79 1
(BJ410044) Dictyostelium discoideum cDNA clone:ddv11b05, 5' ... 311 1e-79 1
(BJ409876) Dictyostelium discoideum cDNA clone:ddv10i12, 5' ... 311 1e-79 1
(BJ396145) Dictyostelium discoideum cDNA clone:dds41d18, 5' ... 311 1e-79 1
(BJ395419) Dictyostelium discoideum cDNA clone:dds38e24, 5' ... 311 1e-79 1
(BJ394349) Dictyostelium discoideum cDNA clone:dds34d19, 5' ... 311 1e-79 1
(BJ390732) Dictyostelium discoideum cDNA clone:dds23d15, 5' ... 311 1e-79 1
(BJ370514) Dictyostelium discoideum cDNA clone:ddc54k11, 5' ... 311 1e-79 1
(BJ369474) Dictyostelium discoideum cDNA clone:ddc50o17, 5' ... 311 1e-79 1
(BJ368340) Dictyostelium discoideum cDNA clone:ddc46f07, 5' ... 311 1e-79 1
(BJ367708) Dictyostelium discoideum cDNA clone:ddc43o17, 5' ... 311 1e-79 1
(BJ367368) Dictyostelium discoideum cDNA clone:ddc42o08, 5' ... 311 1e-79 1
(BJ366498) Dictyostelium discoideum cDNA clone:ddc39n03, 5' ... 311 1e-79 1
(BJ366490) Dictyostelium discoideum cDNA clone:ddc39l02, 5' ... 311 1e-79 1
(BJ364981) Dictyostelium discoideum cDNA clone:ddc33o17, 5' ... 311 1e-79 1
(BJ362463) Dictyostelium discoideum cDNA clone:ddc21k21, 5' ... 311 1e-79 1
(BJ351025) Dictyostelium discoideum cDNA clone:dda41d20, 3' ... 311 1e-79 1
(BJ350974) Dictyostelium discoideum cDNA clone:dda41i18, 3' ... 311 1e-79 1
(BJ339006) Dictyostelium discoideum cDNA clone:dda63e22, 5' ... 311 1e-79 1
(BJ338325) Dictyostelium discoideum cDNA clone:dda60m24, 5' ... 311 1e-79 1
(BJ337400) Dictyostelium discoideum cDNA clone:dda57e11, 5' ... 311 1e-79 1
(BJ333553) Dictyostelium discoideum cDNA clone:dda43l04, 5' ... 311 1e-79 1
(BJ333150) Dictyostelium discoideum cDNA clone:dda41i18, 5' ... 311 1e-79 1
(BJ331987) Dictyostelium discoideum cDNA clone:dda37g20, 5' ... 311 1e-79 1
(BJ328892) Dictyostelium discoideum cDNA clone:dda30a05, 5' ... 311 1e-79 1
(BJ327541) Dictyostelium discoideum cDNA clone:dda20f23, 5' ... 311 1e-79 1
(BJ324807) Dictyostelium discoideum cDNA clone:dda8j05, 5' e... 311 1e-79 1
(BJ323656) Dictyostelium discoideum cDNA clone:dda11h18, 5' ... 311 1e-79 1
(BJ423860) Dictyostelium discoideum cDNA clone:ddv50k15, 5' ... 309 4e-79 1
(BJ423397) Dictyostelium discoideum cDNA clone:ddv49g01, 5' ... 309 4e-79 1
(BJ420801) Dictyostelium discoideum cDNA clone:ddv40a14, 5' ... 309 4e-79 1
(BJ416183) Dictyostelium discoideum cDNA clone:ddv25p04, 5' ... 309 4e-79 1
(BJ393077) Dictyostelium discoideum cDNA clone:dds30c05, 5' ... 309 4e-79 1
(BJ392897) Dictyostelium discoideum cDNA clone:dds29h12, 5' ... 309 4e-79 1
(BJ334219) Dictyostelium discoideum cDNA clone:dda45e17, 5' ... 309 4e-79 1
(BJ424747) Dictyostelium discoideum cDNA clone:ddv53o08, 5' ... 307 2e-78 1
(BJ388450) Dictyostelium discoideum cDNA clone:dds9j14, 5' e... 307 2e-78 1
(BJ368025) Dictyostelium discoideum cDNA clone:ddc45a04, 5' ... 307 2e-78 1
(BJ358951) Dictyostelium discoideum cDNA clone:ddc12g02, 5' ... 307 2e-78 1
(BJ336078) Dictyostelium discoideum cDNA clone:dda52m17, 5' ... 307 2e-78 1
(BJ323688) Dictyostelium discoideum cDNA clone:dda11d24, 5' ... 307 2e-78 1
(AU272381) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 305 6e-78 1
(BJ416543) Dictyostelium discoideum cDNA clone:ddv26b24, 5' ... 305 6e-78 1
(BJ416103) Dictyostelium discoideum cDNA clone:ddv24p22, 5' ... 305 6e-78 1
(BJ412538) Dictyostelium discoideum cDNA clone:ddv8p19, 5' e... 305 6e-78 1
(BJ411221) Dictyostelium discoideum cDNA clone:ddv3a13, 5' e... 305 6e-78 1
(BJ410612) Dictyostelium discoideum cDNA clone:ddv1p01, 5' e... 305 6e-78 1
(BJ390041) Dictyostelium discoideum cDNA clone:dds21a02, 5' ... 305 6e-78 1
(BJ368153) Dictyostelium discoideum cDNA clone:ddc45b17, 5' ... 305 6e-78 1
(BJ365366) Dictyostelium discoideum cDNA clone:ddc35i05, 5' ... 305 6e-78 1
(BJ365046) Dictyostelium discoideum cDNA clone:ddc33o23, 5' ... 305 6e-78 1
(BJ331234) Dictyostelium discoideum cDNA clone:dda34a15, 5' ... 305 6e-78 1
(BJ328130) Dictyostelium discoideum cDNA clone:dda23f02, 5' ... 305 6e-78 1
(DQ340385) Dictyostelium citrinum 17S ribosomal RNA, 5.8S ri... 303 3e-77 1
(BJ426201) Dictyostelium discoideum cDNA clone:ddv58p06, 5' ... 303 3e-77 1
(BJ417698) Dictyostelium discoideum cDNA clone:ddv28a16, 5' ... 303 3e-77 1
(BJ412314) Dictyostelium discoideum cDNA clone:ddv7h23, 5' e... 303 3e-77 1
(BJ387385) Dictyostelium discoideum cDNA clone:dds2o01, 5' e... 303 3e-77 1
(BJ366464) Dictyostelium discoideum cDNA clone:ddc39f05, 5' ... 303 3e-77 1
(BJ330823) Dictyostelium discoideum cDNA clone:dda32k19, 5' ... 303 3e-77 1
(BJ368639) Dictyostelium discoideum cDNA clone:ddc47c15, 5' ... 301 1e-76 1
(BJ359166) Dictyostelium discoideum cDNA clone:ddc13j06, 5' ... 301 1e-76 1
(BJ411144) Dictyostelium discoideum cDNA clone:ddv3m03, 5' e... 299 4e-76 1
(BJ382666) Dictyostelium discoideum cDNA clone:ddc45b17, 3' ... 297 2e-75 1
(BJ335912) Dictyostelium discoideum cDNA clone:dda52c05, 5' ... 297 2e-75 1
(V00192) Dictyostelium discoideum 5.8S ribosomal RNA. 295 6e-75 1
(BJ354146) Dictyostelium discoideum cDNA clone:dda52m17, 3' ... 295 6e-75 1
(BJ379078) Dictyostelium discoideum cDNA clone:ddc33o17, 3' ... 293 2e-74 1
(BJ368161) Dictyostelium discoideum cDNA clone:ddc45d17, 5' ... 293 2e-74 1
(BJ393940) Dictyostelium discoideum cDNA clone:dds33p02, 5' ... 238 4e-74 2
(BJ368352) Dictyostelium discoideum cDNA clone:ddc46i07, 5' ... 289 4e-73 1
(BJ425964) Dictyostelium discoideum cDNA clone:ddv57m14, 5' ... 192 2e-72 2
(BJ414725) Dictyostelium discoideum cDNA clone:ddv20a08, 5' ... 192 2e-72 2
(BJ393976) Dictyostelium discoideum cDNA clone:dds33i09, 5' ... 238 2e-72 2
(BJ405603) Dictyostelium discoideum cDNA clone:dds32c10, 3' ... 208 3e-72 3
(EF066487) Dictyostelium mucoroides strain Dmc1 internal tra... 283 2e-71 1
(AM282599) Dictyostelium mucoroides 18S rRNA gene (partial),... 283 2e-71 1
(AM282598) Dictyostelium mucoroides 18S rRNA gene (partial),... 283 2e-71 1
(AM282595) Dictyostelium mucoroides 18S rRNA gene (partial),... 283 2e-71 1
(BJ349320) Dictyostelium discoideum cDNA clone:dda36j05, 3' ... 170 3e-71 2
(AU263685) Dictyostelium discoideum vegetative cDNA clone:VS... 281 9e-71 1
(AU272241) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 280 4e-70 1
(BJ395729) Dictyostelium discoideum cDNA clone:dds39o19, 5' ... 159 5e-70 2
(AU271307) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 276 8e-70 2
(BJ440918) Dictyostelium discoideum cDNA clone:ddv45j03, 3' ... 278 1e-69 1
(AM282597) Dictyostelium mucoroides 18S rRNA gene (partial),... 276 6e-69 1
(AM282596) Dictyostelium mucoroides 18S rRNA gene (partial),... 276 6e-69 1
(BJ331775) Dictyostelium discoideum cDNA clone:dda36d05, 5' ... 260 8e-69 2
(FJ424828) Dictyostelium purpureum strain QSpu36 17S ribosom... 268 1e-66 1
(FJ424827) Dictyostelium purpureum strain QSpu37 17S ribosom... 268 1e-66 1
(EF066486) Dictyostelium giganteum strain Dg3E internal tran... 268 1e-66 1
(AM282592) Dictyostelium giganteum 18S rRNA gene (partial), ... 268 1e-66 1
(AF219103) Dictyostelium purpureum 18S ribosomal RNA gene, p... 268 1e-66 1
(AF219102) Dictyostelium giganteum 18S ribosomal RNA gene, p... 268 1e-66 1
(AU261782) Dictyostelium discoideum vegetative cDNA clone:VS... 268 1e-66 1
(AF219101) Dictyostelium dimigraformum 18S ribosomal RNA gen... 266 6e-66 1
(BJ382936) Dictyostelium discoideum cDNA clone:ddc46i07, 3' ... 266 6e-66 1
(AU271133) Dictyostelium discoideum vegetative cDNA clone:VS... 264 2e-65 1
(AF219107) Polysphondylium violaceum 18S ribosomal RNA gene,... 262 9e-65 1
(EF066488) Dictyostelium sphaerocephalum strain DsppCal1 int... 260 3e-64 1
(DQ463371) Dictyostelium macrocephalum 18S ribosomal RNA gen... 260 3e-64 1
(DQ463370) Dictyostelium mucoroides 18S ribosomal RNA gene, ... 260 3e-64 1
(AY330646) Dictyostelium clavatum 18S ribosomal RNA gene, pa... 260 3e-64 1
(AM282605) Dictyostelium sphaerocephalum 18S rRNA gene (part... 260 3e-64 1
(AM282603) Dictyostelium sphaerocephalum 18S rRNA gene (part... 260 3e-64 1
(AM282602) Dictyostelium sphaerocephalum 18S rRNA gene (part... 260 3e-64 1
(AM282600) Dictyostelium sphaerocephalum 18S rRNA gene (part... 260 3e-64 1
(AF351199) Dictyostelium sphaerocephalum 18S ribosomal RNA g... 260 3e-64 1
(AF351197) Dictyostelium mucoroides 18S ribosomal RNA gene, ... 260 3e-64 1
(BJ334653) Dictyostelium discoideum cDNA clone:dda47f12, 5' ... 260 3e-64 1
(BJ428777) Dictyostelium discoideum cDNA clone:ddv1p01, 3' e... 168 7e-63 2
(FJ424826) Dictyostelium purpureum strain QSpu4 17S ribosoma... 252 8e-62 1
(BJ414922) Dictyostelium discoideum cDNA clone:ddv20i19, 5' ... 252 8e-62 1
(BJ379156) Dictyostelium discoideum cDNA clone:ddc33o23, 3' ... 250 3e-61 1
(BJ387390) Dictyostelium discoideum cDNA clone:dds2a08, 5' e... 246 5e-60 1
(AM282591) Dictyostelium giganteum 18S rRNA gene (partial), ... 147 6e-60 2
(AM282604) Dictyostelium sphaerocephalum 18S rRNA gene (part... 190 6e-60 2
(FJ424862) Dictyostelium purpureum strain QSpu19 17S ribosom... 244 2e-59 1
(FJ424861) Dictyostelium purpureum strain QSpu31 17S ribosom... 244 2e-59 1
(FJ424860) Dictyostelium purpureum strain QSpu35 17S ribosom... 244 2e-59 1
(FJ424859) Dictyostelium purpureum strain QSpu25 17S ribosom... 244 2e-59 1
(FJ424858) Dictyostelium purpureum strain QSpu34 17S ribosom... 244 2e-59 1
(FJ424857) Dictyostelium purpureum strain QSpu32 17S ribosom... 244 2e-59 1
(FJ424856) Dictyostelium purpureum strain QSpu24 17S ribosom... 244 2e-59 1
(FJ424855) Dictyostelium purpureum strain QSpu22 17S ribosom... 244 2e-59 1
(FJ424854) Dictyostelium purpureum strain QSpu20 17S ribosom... 244 2e-59 1
(FJ424853) Dictyostelium purpureum strain QSpu18 17S ribosom... 244 2e-59 1
(FJ424852) Dictyostelium purpureum strain QSpu17 17S ribosom... 244 2e-59 1
(FJ424851) Dictyostelium purpureum strain QSpu16 17S ribosom... 244 2e-59 1
(FJ424850) Dictyostelium purpureum strain QSpu15 17S ribosom... 244 2e-59 1
(FJ424849) Dictyostelium purpureum strain QSpu14 17S ribosom... 244 2e-59 1
(FJ424848) Dictyostelium purpureum strain QSpu13 17S ribosom... 244 2e-59 1
(FJ424847) Dictyostelium purpureum strain QSpu12 17S ribosom... 244 2e-59 1
(FJ424846) Dictyostelium purpureum strain QSpu11 17S ribosom... 244 2e-59 1
(FJ424845) Dictyostelium purpureum strain QSpu10 17S ribosom... 244 2e-59 1
(FJ424844) Dictyostelium purpureum strain QSpu9 17S ribosoma... 244 2e-59 1
(FJ424843) Dictyostelium purpureum strain QSpu8 17S ribosoma... 244 2e-59 1
(FJ424842) Dictyostelium purpureum strain QSpu7 17S ribosoma... 244 2e-59 1
(FJ424841) Dictyostelium purpureum strain QSpu5 17S ribosoma... 244 2e-59 1
(FJ424840) Dictyostelium purpureum strain QSpu3 17S ribosoma... 244 2e-59 1
(FJ424839) Dictyostelium purpureum strain QSpu2 17S ribosoma... 244 2e-59 1
(FJ424838) Dictyostelium purpureum strain QSpu30 17S ribosom... 244 2e-59 1
(FJ424837) Dictyostelium purpureum strain QSpu26 17S ribosom... 244 2e-59 1
(FJ424836) Dictyostelium purpureum strain QSpu28 17S ribosom... 244 2e-59 1
(FJ424835) Dictyostelium purpureum strain QSpu27 17S ribosom... 244 2e-59 1
(FJ424834) Dictyostelium purpureum strain QSpu29 17S ribosom... 244 2e-59 1
(FJ424833) Dictyostelium purpureum strain QSpu33 17S ribosom... 244 2e-59 1
(FJ424832) Dictyostelium purpureum strain QSpu23 17S ribosom... 244 2e-59 1
(FJ424831) Dictyostelium purpureum strain QSpu21 17S ribosom... 244 2e-59 1
(FJ424830) Dictyostelium purpureum strain QSpu6 17S ribosoma... 244 2e-59 1
(FJ424829) Dictyostelium purpureum strain QSpu1 17S ribosoma... 244 2e-59 1
(AM282601) Dictyostelium sphaerocephalum 18S rRNA gene (part... 113 2e-54 3
(AU272240) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 214 8e-53 2
(DQ340386) Dictyostelium purpureum 17S ribosomal RNA, 5.8S r... 218 1e-51 1
(BJ388199) Dictyostelium discoideum cDNA clone:dds8l08, 5' e... 206 4e-48 1
(BJ440472) Dictyostelium discoideum cDNA clone:ddv43e21, 3' ... 198 1e-45 1
(BJ357813) Dictyostelium discoideum cDNA clone:dda64e19, 3' ... 100 7e-45 5
(BJ419506) Dictyostelium discoideum cDNA clone:ddv36f12, 5' ... 133 6e-44 2
(BJ333190) Dictyostelium discoideum cDNA clone:dda41d20, 5' ... 192 7e-44 1
(BJ335056) Dictyostelium discoideum cDNA clone:dda48c22, 5' ... 190 3e-43 1
(BJ326118) Dictyostelium discoideum cDNA clone:dda15e12, 5' ... 176 4e-39 1

>(AU061946) Dictyostelium discoideum slug cDNA, clone SLG727.
Length = 699

Score = 1292 bits (652), Expect(2) = 0.0
Identities = 652/652 (100%)
Strand = Plus / Plus


Query: 2248 catcgaagagatgttggcatatgctcatgagacccaacatgagaaaaccatcagatcctt 2307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catcgaagagatgttggcatatgctcatgagacccaacatgagaaaaccatcagatcctt 60


Query: 2308 atccatgggtttggcattcttaatgtatggcaaggaggagagtgccgacaccttgatcga 2367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atccatgggtttggcattcttaatgtatggcaaggaggagagtgccgacaccttgatcga 120


Query: 2368 gcaaatgattggtgacaaagatccattgattagatatggtggtatgtatgcaattgcctt 2427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaaatgattggtgacaaagatccattgattagatatggtggtatgtatgcaattgcctt 180


Query: 2428 tgcttactgtggaactggtcacaatgatgccttgagaaaactcttacatgtcgccgtctc 2487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcttactgtggaactggtcacaatgatgccttgagaaaactcttacatgtcgccgtctc 240


Query: 2488 tgatggtaccgactctgttagaagagctgccgtcacttgtattggtttcgttttgtccag 2547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgatggtaccgactctgttagaagagctgccgtcacttgtattggtttcgttttgtccag 300


Query: 2548 acaaccagagaaatgtccaaaggcaatcgctttgttggccgaaagttataacccacacgt 2607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acaaccagagaaatgtccaaaggcaatcgctttgttggccgaaagttataacccacacgt 360


Query: 2608 tcgttatggtgccgctttcgctttgggtattgcatgtgctggtaccggtcaaagagatgc 2667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcgttatggtgccgctttcgctttgggtattgcatgtgctggtaccggtcaaagagatgc 420


Query: 2668 tttggaaattttaaaatcactcaccaccgatagtgttggttacgttaaacaagccgcttg 2727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttggaaattttaaaatcactcaccaccgatagtgttggttacgttaaacaagccgcttg 480


Query: 2728 gatctccatggctatggtattgattcaaaccagtaaagagttggtaccagaggctgaaac 2787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatctccatggctatggtattgattcaaaccagtaaagagttggtaccagaggctgaaac 540


Query: 2788 cgccagaaaattattcgccacttgtatcagtgataaacgtgaggattcaatgtccaagtt 2847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgccagaaaattattcgccacttgtatcagtgataaacgtgaggattcaatgtccaagtt 600


Query: 2848 tggtgctgtattagcatttggtgtcattgatgccggtggtagaaactctacc 2899
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tggtgctgtattagcatttggtgtcattgatgccggtggtagaaactctacc 652

Score = 89.7 bits (45), Expect(2) = 0.0
Identities = 48/49 (97%)
Strand = Plus / Plus


Query: 2899 ccattcaattacattcaccaagtggtcacaagaatatgaatgctatcgt 2947
|||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 651 ccattcaattacattcaccaagtggtcataagaatatgaatgctatcgt 699

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 4,201,635,758
Number of extensions: 242384454
Number of successful extensions: 19392001
Number of sequences better than 10.0: 1493
Length of query: 3663
Length of database: 101,790,757,118
Length adjustment: 25
Effective length of query: 3638
Effective length of database: 99,238,119,368
Effective search space: 361028278260784
Effective search space used: 361028278260784
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.28
Homology vs Protein
Query= Contig-U16438-1 (Contig-U16438-1Q) /CSM_Contig/Contig-U16438-1Q.Seq.d
(3663 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

BX571973_4(BX571973|pid:none) Zebrafish DNA sequence from clone ... 452 e-157
AB372269_1(AB372269|pid:none) Capsicum chinense mRNA for putativ... 442 e-155
BC100172_1(BC100172|pid:none) Xenopus laevis hypothetical protei... 447 e-155
AM453244_1(AM453244|pid:none) Vitis vinifera contig VV78X103020.... 445 e-154
(Q5F418) RecName: Full=26S proteasome non-ATPase regulatory subu... 444 e-154
(Q3TXS7) RecName: Full=26S proteasome non-ATPase regulatory subu... 446 e-154
BC151445_1(BC151445|pid:none) Bos taurus proteasome (prosome, ma... 446 e-154
(Q8IV79) RecName: Full=26S proteasome non-ATPase regulatory subu... 446 e-154
D44466_1(D44466|pid:none) Homo sapiens mRNA for proteasome subun... 444 e-153
CR855173_3(CR855173|pid:none) Oryza sativa genomic DNA, chromoso... 442 e-152
AL606691_12(AL606691|pid:none) Oryza sativa genomic DNA, chromos... 441 e-152
AY230830_1(AY230830|pid:none) Arabidopsis thaliana 26S proteasom... 442 e-151
AC003974_14(AC003974|pid:none) Arabidopsis thaliana chromosome 2... 442 e-151
AY242527_1(AY242527|pid:none) Arabidopsis thaliana 26S proteasom... 440 e-151
AM458338_1(AM458338|pid:none) Vitis vinifera contig VV78X165900.... 441 e-151
BC014013_1(BC014013|pid:none) Homo sapiens proteasome (prosome, ... 446 e-149
BC001053_1(BC001053|pid:none) Homo sapiens proteasome (prosome, ... 446 e-149
BC105883_1(BC105883|pid:none) Rattus norvegicus proteasome (pros... 446 e-149
BC047897_1(BC047897|pid:none) Homo sapiens proteasome (prosome, ... 446 e-149
AK087947_1(AK087947|pid:none) Mus musculus 2 days neonate thymus... 446 e-148
BC039845_1(BC039845|pid:none) Homo sapiens, Similar to proteasom... 446 e-146
BC022955_1(BC022955|pid:none) Mus musculus proteasome (prosome, ... 446 e-146
CR762098_1(CR762098|pid:none) Xenopus tropicalis finished cDNA, ... 447 e-146
BC045463_1(BC045463|pid:none) Danio rerio proteasome (prosome, m... 452 e-145
(Q9V3P6) RecName: Full=26S proteasome non-ATPase regulatory subu... 437 e-144
BT001598_1(BT001598|pid:none) Drosophila melanogaster RE29621 fu... 435 e-143
AM270075_3(AM270075|pid:none) Aspergillus niger contig An04c0140... 400 e-142
CU633876_161(CU633876|pid:none) Podospora anserina genomic DNA c... 409 e-141
BC064398_1(BC064398|pid:none) Homo sapiens proteasome (prosome, ... 446 e-138
AE017353_177(AE017353|pid:none) Cryptococcus neoformans var. neo... 414 e-135
CP001328_423(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 396 e-134
FN392320_701(FN392320|pid:none) Pichia pastoris GS115 chromosome... 397 e-133
FM992688_1111(FM992688|pid:none) Candida dubliniensis CD36 chrom... 386 e-124
CU928175_366(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 359 e-119
CP000592_89(CP000592|pid:none) Ostreococcus lucimarinus CCE9901 ... 360 e-119
(Q6FIP2) RecName: Full=26S proteasome regulatory subunit RPN2; ... 349 e-116
AE014187_630(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 369 e-110
CR954212_78(CR954212|pid:none) Ostreococcus tauri strain OTTH059... 355 e-105
(O74762) RecName: Full=26S proteasome regulatory subunit rpn2; ... 385 e-105
AF186594_4(AF186594|pid:none) Drosophila melanogaster phosphogly... 352 6e-95
AF443184_1(AF443184|pid:none) Paracoccidioides brasiliensis subu... 256 1e-94
(Q18115) RecName: Full=26S proteasome non-ATPase regulatory subu... 294 4e-93
CR940353_385(CR940353|pid:none) Theileria annulata strain Ankara... 340 2e-91
CT005266_179(CT005266|pid:none) Leishmania major strain Friedlin... 308 1e-81
AM502246_179(AM502246|pid:none) Leishmania infantum chromosome 28. 308 1e-81
AY267183_1(AY267183|pid:none) Puccinia triticina putative protea... 291 2e-76
FN357888_3(FN357888|pid:none) Schistosoma mansoni genome sequenc... 282 6e-74
BC018172_1(BC018172|pid:none) Mus musculus proteasome (prosome, ... 179 8e-66
U39851_7(U39851|pid:none) Caenorhabditis elegans cosmid C23G10, ... 238 1e-60
DQ213424_1(DQ213424|pid:none) Taeniopygia guttata clone 0065P002... 230 3e-58
EF464672_1(EF464672|pid:none) Gossypium hirsutum 26S proteasome ... 128 4e-45
T15575(T15575)hypothetical protein C23G10.4a - Caenorhabditis el... 174 2e-41
AB070257_1(AB070257|pid:none) Oryza sativa Japonica Group OsRPN2... 139 2e-38
CP000883_66(CP000883|pid:none) Hemiselmis andersenii chromosome ... 151 1e-35
EU026256_1(EU026256|pid:none) Lithobius forticatus proteasome no... 140 3e-31
EU026261_1(EU026261|pid:none) Tanystylum orbiculare proteasome n... 140 5e-31
EU026259_1(EU026259|pid:none) Mastigoproctus giganteus proteasom... 137 3e-30
EU026260_1(EU026260|pid:none) Narceus americanus proteasome non-... 132 7e-29
AY836666_1(AY836666|pid:none) Aurelia aurita clone 215 26S prote... 130 4e-28
EU020197_1(EU020197|pid:none) Forficula auricularia clone Fau801... 129 6e-28
AK220772_1(AK220772|pid:none) Arabidopsis thaliana mRNA for 26S ... 122 8e-27
EU026258_1(EU026258|pid:none) Nebalia hessleri proteasome non-AT... 122 1e-25
FN368128_1(FN368128|pid:none) Schistosoma mansoni genome sequenc... 110 4e-22
A90110(A90110) 26S proteasome regulatory subunit [imported] - Gu... 89 9e-16
AK071400_1(AK071400|pid:none) Oryza sativa Japonica Group cDNA c... 73 7e-11
AP004278_13(AP004278|pid:none) Oryza sativa Japonica Group genom... 71 3e-10
EF678603_1(EF678603|pid:none) Picea sitchensis clone WS02929_D19... 66 8e-09
AC093543_43(AC093543|pid:none) Trypanosoma brucei chromosome 3 c... 64 4e-08
AF404111_1(AF404111|pid:none) Trypanosoma brucei proteasome regu... 64 5e-08
AB032832_1(AB032832|pid:none) Trypanosoma cruzi tcrpn1-2 gene fo... 64 5e-08
AC007048_14(AC007048|pid:none) Arabidopsis thaliana chromosome 2... 61 3e-07
A84591(A84591)26S proteasome regulatory subunit S2 [imported] - ... 60 8e-07
AY230829_1(AY230829|pid:none) Arabidopsis thaliana 26S proteasom... 59 1e-06
BT058758_1(BT058758|pid:none) Salmo salar clone ssal-rgf-501-164... 59 1e-06
AB032831_1(AB032831|pid:none) Trypanosoma cruzi tcrpn1-1 gene fo... 59 2e-06
AJ719640_1(AJ719640|pid:none) Gallus gallus mRNA for hypothetica... 57 5e-06
BC098969_1(BC098969|pid:none) Xenopus laevis hypothetical protei... 56 9e-06
AM502247_12(AM502247|pid:none) Leishmania infantum chromosome 29. 56 1e-05
AK159815_1(AK159815|pid:none) Mus musculus osteoclast-like cell ... 55 1e-05
AB385107_1(AB385107|pid:none) Synthetic construct DNA, clone: pF... 55 2e-05
(Q4FZT9) RecName: Full=26S proteasome non-ATPase regulatory subu... 55 2e-05
(Q13200) RecName: Full=26S proteasome non-ATPase regulatory subu... 55 2e-05
(P56701) RecName: Full=26S proteasome non-ATPase regulatory subu... 55 2e-05
AK167774_1(AK167774|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 55 2e-05
AK302177_1(AK302177|pid:none) Homo sapiens cDNA FLJ55045 complet... 55 2e-05
AK297256_1(AK297256|pid:none) Homo sapiens cDNA FLJ53357 complet... 55 2e-05
AY892425_1(AY892425|pid:none) Synthetic construct Homo sapiens c... 55 2e-05
BC105524_1(BC105524|pid:none) Bos taurus proteasome (prosome, ma... 55 2e-05
BC023049_1(BC023049|pid:none) Mus musculus proteasome (prosome, ... 55 2e-05
AL162014_1(AL162014|pid:none) Homo sapiens mRNA; cDNA DKFZp564A2... 55 3e-05
BC068911_1(BC068911|pid:none) Xenopus laevis proteasome (prosome... 55 3e-05
BC090101_1(BC090101|pid:none) Xenopus tropicalis proteasome (pro... 54 3e-05
CP000080_12(CP000080|pid:none) Leishmania major strain Friedlin ... 54 3e-05
FM992688_1218(FM992688|pid:none) Candida dubliniensis CD36 chrom... 54 3e-05
FN392321_921(FN392321|pid:none) Pichia pastoris GS115 chromosome... 54 4e-05
AY958153_1(AY958153|pid:none) Hydractinia echinata 26S proteasom... 54 6e-05
AF039052_4(AF039052|pid:none) Caenorhabditis elegans cosmid T22D... 53 7e-05
AK150374_1(AK150374|pid:none) Mus musculus bone marrow macrophag... 52 1e-04
AP007166_246(AP007166|pid:none) Aspergillus oryzae RIB40 genomic... 52 2e-04
AB168509_1(AB168509|pid:none) Macaca fascicularis testis cDNA cl... 52 2e-04
AM270401_44(AM270401|pid:none) Aspergillus niger contig An18c008... 51 4e-04
CP000393_1567(CP000393|pid:none) Trichodesmium erythraeum IMS101... 49 0.001
D71619(D71619)PSD2-like 26S proteasomal subunit PFB0260w - malar... 48 0.003
CP000099_2346(CP000099|pid:none) Methanosarcina barkeri str. Fus... 47 0.004
CP001324_575(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 47 0.005
AF358776_1(AF358776|pid:none) Oryza sativa clone Osch22 26S prot... 47 0.005
AC2179(AC2179) hypothetical protein alr2986 [imported] - Nostoc ... 46 0.009
CP001037_2242(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 44 0.034
CP000099_2046(CP000099|pid:none) Methanosarcina barkeri str. Fus... 44 0.044
CR940347_521(CR940347|pid:none) Theileria annulata strain Ankara... 44 0.044
CT978603_2056(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 44 0.058
AL590444_30(AL590444|pid:none) chromosome IV of strain GB-M1 of ... 41 0.37
AM398681_1482(AM398681|pid:none) Flavobacterium psychrophilum JI... 40 0.64
BA000040_1272(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 40 0.83
AL844507_149(AL844507|pid:none) Plasmodium falciparum 3D7 chromo... 39 1.4
CP001510_3327(CP001510|pid:none) Methylobacterium extorquens AM1... 39 1.4
FP102531_63(FP102531|pid:none) magnetite-containing magnetic vib... 37 4.1
AM778954_103(AM778954|pid:none) Microcystis aeruginosa PCC 7806 ... 37 4.1
AM438610_1(AM438610|pid:none) Vitis vinifera contig VV78X214557.... 37 5.4
CP001298_3523(CP001298|pid:none) Methylobacterium chloromethanic... 37 5.4
AP009153_986(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DNA... 37 5.4
BA000028_505(BA000028|pid:none) Oceanobacillus iheyensis HTE831 ... 37 5.4
CP000097_1879(CP000097|pid:none) Synechococcus sp. CC9902, compl... 37 7.1
(P32864) RecName: Full=Rab proteins geranylgeranyltransferase co... 36 9.2
X70339_2(X70339|pid:none) S.cerevisiae MRS6 gene. 36 9.2
X70339_1(X70339|pid:none) S.cerevisiae MRS6 gene. 36 9.2
AM778917_46(AM778917|pid:none) Microcystis aeruginosa PCC 7806 g... 36 9.2

>BX571973_4(BX571973|pid:none) Zebrafish DNA sequence from clone
DKEY-254A11 in linkage group 22 Contains the gene for a
novel protein (zgc:77285 ), the gene for a novel protein
(zgc:55818), the gene for a novel protein similar to
vertebrate centaurin beta 2 (CENTB2) and six CpG islands,
complete sequence.
Length = 958

Score = 452 bits (1162), Expect(2) = e-157
Identities = 224/429 (52%), Positives = 311/429 (72%), Gaps = 1/429 (0%)
Frame = +2

Query: 1625 NRLHSILIGDVSIGMNLEFLYRNCSTDMHILQSMKTTSELHKGAIFYSGTLFANALMHAG 1804
+++ IL G+++I ++L+FL RN +TD+ IL K T + + ++ ++ T+ AN+ MH G
Sbjct: 318 SKMIKILSGEMAIELHLQFLIRNNNTDLMIL---KNTKDAVRNSVCHTATVIANSFMHTG 374

Query: 1805 TTRDTFLRSNIEWLYKSTHWTKFSAISSLGVINKGHIKESKSLLKTYLPGASVNQTPYSE 1984
TT D FLR N+EWL ++T+W KF+A +SLGVI+KGH KE+ L+ TYLP + + Y E
Sbjct: 375 TTSDQFLRENLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQE 434

Query: 1985 SGSLYALGLIHASHGEEIIDYLVEKL-HINNAIXXXXXXXXXXXXXXXXXRDDLYEDLKS 2161
G LYALGLIHA+HG +IIDYL+ +L + +N I R D+Y+ LKS
Sbjct: 435 GGGLYALGLIHANHGGDIIDYLLSQLKNASNDIVRHGGALGLGLAALGTARQDVYDLLKS 494

Query: 2162 VLYNDDAVSGEAAGLAMGLVMLGSGAKKAIEEMLAYAHETQHEKTIRSLSMGLAFLMYGK 2341
LY DDAV+GEAAGLA+GLVMLGS + +AIE+M+ YA ETQHEK +R L++G+A +MYG+
Sbjct: 495 NLYQDDAVTGEAAGLALGLVMLGSKSAQAIEDMVGYAQETQHEKILRGLAVGIAMVMYGR 554

Query: 2342 EESADTLIEQMIGDKDPLIRYGGMYAIAFAYCGTGHNDALRKLLHVAVSDGTDSVRRAAV 2521
E AD LIE + DKDP++R GMY +A AYCG+G+N A+R+LLHVAVSD D VRRAAV
Sbjct: 555 MEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAV 614

Query: 2522 TCIGFVLSRQPEKCPKAIALLAESYNPHVRYGAAFALGIACAGTGQRDALEILKSLTTDS 2701
IGF++ R PE+CP ++LL+ESYNPHVRYGAA ALGI CAGTG ++A+ +L+ +T D
Sbjct: 615 ESIGFIMFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDP 674

Query: 2702 VGYVKQAAWISMAMVLIQTSKELVPEAETARKLFATCISDKREDSMSKFGAVLAFGVIDA 2881
V YV+Q A I+ A+++IQ ++ P+ R+L++ I+DK +D M+KFGA+LA GV+DA
Sbjct: 675 VNYVRQGALIASALIMIQQTEVTCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGVLDA 734

Query: 2882 GGRNSTHSI 2908
GGRN T S+
Sbjct: 735 GGRNVTISL 743

Score = 131 bits (329), Expect(2) = e-157
Identities = 72/193 (37%), Positives = 103/193 (53%), Gaps = 1/193 (0%)
Frame = +3

Query: 2901 IQLHSPSGHKNMNAIVGIAGFLQFWYWFPMTHFMGLALTPTSIIGLNKNLEMPVFTFKSN 3080
I L S +GH +M ++VG+ F QFW+WFP++HF+ LA TPT+IIGLNK+L+MP ++SN
Sbjct: 741 ISLQSRTGHTHMPSVVGLLVFTQFWFWFPLSHFLSLAFTPTAIIGLNKDLKMPKVQYRSN 800

Query: 3081 CRPSLFAYPPETKPXXXXXXNKIETAILSYSRKNKLQSSRSAMNIDQDVXXXXXXXXXXX 3260
C+PS FAYPP + K+ TA+LS + K K + ++ +
Sbjct: 801 CKPSTFAYPPPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKKEKEEEKM--EVETQAEAE 858

Query: 3261 XXXXXXXXXXXXXXXXXXXPLFERKSNPARIVPRQLQYVQF-DDARYQPIKKSPAIGIVM 3437
P F+ NPAR +P QL+ + D RYQP K GI++
Sbjct: 859 KEKKDEEKEKEKEKKKEPEPNFQMMENPARALPAQLKVLTMPDSCRYQPFKPLHTGGIII 918

Query: 3438 LRDLTPNEPEQLV 3476
L+D T E E+LV
Sbjct: 919 LKD-TSEEEEELV 930

Score = 373 bits (958), Expect = e-101
Identities = 211/466 (45%), Positives = 302/466 (64%), Gaps = 21/466 (4%)
Frame = +3

Query: 228 LSLLDEDQLELKSYSLEKLDSCVDEFWSEIASSSIDKIKSLSVNKQFPKHELASLVLSKV 407
+SLLDED+ +LK ++L KL+S V++FW+EI S S+ KI+ L ++ F E A+LV SKV
Sbjct: 3 ISLLDEDEPQLKEFALHKLNSVVNDFWAEI-SESVGKIEVLYEDETFRSREFAALVASKV 61

Query: 408 YYNLSDFPNSMEYALSAGSLFNVLSKSEYIETLLYKFIDEYIKLRTST--------NKDT 563
+Y+L F S+ YAL AG LFNV SEY+ET++ K ID Y K R KD
Sbjct: 62 FYHLGAFDESLSYALGAGDLFNVNDDSEYVETIIAKCIDHYTKQRVENAELPEEEEKKD- 120

Query: 564 VINPHLESIVMGMFDRCFKEGSYKQALGIAIEARRLDIIEKAISQSGNVNSMLSYCLHIC 743
I+P LE IV MF RC + YKQA+GIA+E RRLDI EK I +S ++ +L+Y L IC
Sbjct: 121 -IDPRLEGIVNKMFQRCLGDHKYKQAIGIALETRRLDIFEKTILESNDIGGLLAYSLKIC 179

Query: 744 NVSVNNRHFRHSVLGILVNLHLAQEKPDYLSVVQCLIFLDNHIEVATILLSLIKKDEESL 923
+ N+ FR+ VL +LV L++ EKPD+++V QCLIFLD+ V+ IL L+K+D +L
Sbjct: 180 MSLMQNKKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKED--NL 237

Query: 924 LLAYQIGFDLFQNSTQQFLLNVRNRL-------PPVEKKSXXXXXXXPA--SDSMEIDID 1076
L+AYQI FDL+++++QQFL +V L P V + P SDSME +
Sbjct: 238 LMAYQICFDLYESASQQFLSSVIQNLRTVGTPIPAVPGSTNTGTVPTPDKDSDSMETEDK 297

Query: 1077 SGNEKSGGSSSFEQRLERLHS----ILIGDVSIGMNLEFLYRNCSTDMHILQSMKTTSEL 1244
+G+ +G ++ + + +S IL G+++I ++L+FL RN +TD+ IL K T +
Sbjct: 298 AGSSPAGKTADAKDEPKDQNSKMIKILSGEMAIELHLQFLIRNNNTDLMIL---KNTKDA 354

Query: 1245 HKGAIFYSGTLFANALMHAGTTRDTFLRSNIEWLYKSTHWTKFSAISSLGVINKGHIKES 1424
+ ++ ++ T+ AN+ MH GTT D FLR N+EWL ++T+W KF+A +SLGVI+KGH KE+
Sbjct: 355 VRNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTATASLGVIHKGHEKEA 414

Query: 1425 KSLLKTYLPGASVNQTPYSESGSLYALGLIHASHGEEIIDYLVEKL 1562
L+ TYLP + + Y E G LYALGLIHA+HG +IIDYL+ +L
Sbjct: 415 LQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQL 460

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 5,948,963,887
Number of extensions: 123537712
Number of successful extensions: 327679
Number of sequences better than 10.0: 127
Number of HSP's gapped: 326928
Number of HSP's successfully gapped: 282
Length of query: 1221
Length of database: 1,061,185,681
Length adjustment: 140
Effective length of query: 1081
Effective length of database: 603,602,961
Effective search space: 652494800841
Effective search space used: 652494800841
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.71 gvh: 0.64 alm: 0.37 top: 0.53 tms: 0.00 mit: 0.41 mip: 0.05
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: nuclear
32.0 %: mitochondrial
20.0 %: cytoplasmic
4.0 %: cytoskeletal
4.0 %: vesicles of secretory system

>> prediction for Contig-U16438-1 is nuc

VS (DIR, S) 0
VH (FL, L) 31
VF (FL, S) 0
AH (FL, L) 85
AF (FL, S) 2
SL (DIR, L) 3
SS (DIR, S) 0
SH (FL, L) 14
SF (FL, S) 2
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 2
FC-IC (SUB) 2