Contig-U16421-1
Contig ID Contig-U16421-1
Contig update 2004. 6.11
Contig sequence
>Contig-U16421-1 (Contig-U16421-1Q) /CSM_Contig/Contig-U16421-1Q.Seq.d
TATTTTACCATGTCTCAAAATCATAATTTATTTATGTACTCTTGATCGTA
AAGGTGCTTTCATTACAAAGGATGCAAAAGATCTTGAAATCTCTCAAAAA
TTATTAGCAACAAGATTTGAAAAATTAAAATCATCAAAGAAACAAGCCAT
TGCTTTGGCTGCAACAGCAACAGCAACAGCAACAGCAGCTAATGCTTCAT
TAACCTCAACCATTGAAAAGAAGATTGAAGCATTATCATCATTACTTTCA
CCAAATACTGTGAATAATATTGCACTTTCTGTTGCATCATCATTACTTTC
ACCACAACAAATGCAATTACAAATTCAACAACAAATCGCTTTACAACAAC
AACAAATTCAACAACAAATTCAACAACAGCAACAACAATTGAATGAATCT
GTTTCAGGTTTAAAGATTTTATCACCATCTTCTTCCTCATCATCTCCATC
TGGTGTTGGTGCTACTGGTAGCGAAAATGGTGGTGGTGGTAGTGGAAGTA
GTAGTGGTAGTAGTGTTAGTGGTAGTGGTTCAATATCTTCATCTCAAGAT
CCAAACATATTATCAATCTTTGATAATGATACTTCAAATGCAGGTGCTAA
CGAATCATGGGATGGTGATGATAATCCAATTGCAAATGCTTGGTCATCAA
AATATGAAAACTATTTATCTAATTTCAATGTAAACTCTTCAATCGGTGAA
ATATCAAAATCTTTGAAACCACTTAGCCAAGATGAATTAAAGAGTAAATA
TTTCAAGAGATGGTATGCTCAAGTTAAAAAGAGAAAACAACAACAACAAC
AACAATCTTCAGGTATTGGTTATGCAACTCAATCAAGTTTCGAGGTATTG
TTTGAAGAGAAATGGTTAGAGAAATTGTTATTCAATTCAACATCATCAAT
TCGTCTTGAAATAATCACTTTGATGGGTATTTTAAGTAAGAATAGCAATA
GTAGATCACTTAAATTCTTGGATCTCCTTACAAAGATTCTTCCAAATGCA
ACAGAGGCAGGTGAATATTCTGCAGAGTTTTTCGGACTTTTCAATAGTTT
TATCTCAACCTCTCAAGATCGTAAGATTTATTTAGCTGTAAAAGGTTTCA
TTCCATTCATTTGTGATGCTATCATCAAGGAGATTGAACATATCAAATCA
AAGGAAGGTTCATTTAGTACTGATGTTTCACAAGGTTTTGTTTTGAAAAC
TTTAGTTGCTATACTTAAATCATTCCTCGATGTACCAACTCTTAAAGCAA
AGATGAAGAAAGATAATATGTTAGAAAAGGTATTGGATGCTTTCTTATCA
CTTCGTGGTGTTATCGTTCAAAAGAATAAGTTAACCGAGGATTCTGTACG
TTATCTCCAAGAGTTGATGAAATCACTAAACAATGAATCTGTTCAAGACA
ATAAGAAGTTTATGGCTGCTAATATTAAAGCATTGGCTAAATATCAATCG
GATGGTAGAACTCCAATATTTATTTTCGAACAACTTTGTAATATTGTTTG
TCCAACCAAACCAGATCCAATCTATCAATTGATACTCTTTAAAGCTGCAT
CTCAAGAGGAATACATTAGAGGTTCAATGAATCGTAACCCATATACTTCC
AATACCTTTGGTGGTCCACTCATGAGAGATGTAAAGAATAAGATTTGTAA
AGCTTTAGATTTAGGTAGTTTCTTAGATGATGATAATGGTATGGAGTTAT
TAGTCGATAATAAGATCATTAAATTGGATTTACCAATTAAAAAAGTTTAC
GAATTAGTATGGAAAAAGAGTCCACAAGCATTAAGAACAGCAGATATCAA
TATTCCAATGAATGTAGTTTATCGTCTTCAAGGTTTAGATGGTGAAGCAA
CTGAAGAAATCATTGAAACTCTTAATGATAATAACTCTGAAGAAAAGGAT
CCAGAAGTTGAATATGAAATCACAAGTGTTATGGCTGAATGCGGTGGTTT
GGAATCAATGATCTCAATGATTGAACGTATCAATGATTTCTCAATCGAGA
AGGAATTGGCACAATTAGTAATTAAATTACTCTACCATTGTTGTAAGATT
AAAATTAATCGTCAAAAATTACTTACACTCAATACTGTTGGTAGATTATT
GGAGAAATTAAAACAAGCTTTCCATCAACCAGAACTTTCCGAACATTTAT
TGGTCATCATTGAATCGGTAGTTAGCGAAGCAAATCGTGATTATCTTTCG
TGGTTCAAATTCTTCTACCTCACTCTCACATCATAAAGATATCAATGAAG
CTCAAGAACAAATGAATATGTTTTTAGATAAATTAAACGGTGCTCAAGTA
ATGTCAAATCCAAAGATCATTCAAGCAATCACAAGAATTATTCCATTCCT
TACCTATGGTCACACTGAAATTATGGATTATCTCGTTGACTTTTTCACAC
CATATTTAAATTTCCAAGAGTTTGATGATTCAAAATCAAAAGATACCAAT
CATGTTTATCATCTTGATTTCTTTACCAAACTTATGGAAAATACTCGTCC
AGATTCAAATGGTAGAAGTATTCGTTCAATCATTATTAAGCGTGGTATCA
CTAAATCATTGGTTGATTACTTATTAAATTACTTCCCTGAAAATGGTGAT
AAGACTAGCCAAGAATGGCTTTCCTCTTTGGAGAAACCAGCTTTACCATT
CGTTTTAGTATTATTAAAAGGTTTAGCAATGGGTCATGAACCAACTCAAA
ATATGACTCTAGAATCTAACCTTATCAAAAGAATTCATATACTTGAAGAA
ACAGCTGGTACTAGTGCAAAGATTGGAAGTTTAGCTGAGAATTTATTAGA
GTCAATCGCTGAAGGCAATGAAAAAACCTCAAAGATTGTAAGTGATACTC
GTAAGGAATCGAAGATGGAAAAATTAAGTCATGCTCAAAAACATAGAGAA
GATGTGTTGAAACAATTGGGTTTAGCTCAACAAGGTAAACATATTATGGC
AAACGTTGTTCCAGGTTCAATTGAAGATTTGGATGATGATGAAGGTTTCA
CTTGTATGGTTTGTAGAGAAGGTTATTCATTTAAACCAACCGATGTATTA
GGTATCTATACCTTCTCAAAGAGAATTCCATTAACATCAGTGGGTGAAAC
AACTTGTCCACCATCATCAACAACCAATGTCGCTGCTTCACTTTCTCTCT
CCCCAAGTAGTAGTGGAGGTGGTGGTGGTGGTGCTTTATATTATGGTTTC
ACTACAGTAACTCATTTCAATTTCATTCATTTCAATTGTCATCGTGATGC
AACCAAAGCAGATAGAAGTATGAAGGTACCAAAAGAAGAATGGGAAGGTG
CTGCACTCAGAAATCAACAAACCAAATGTAATGGTCTTTTCCCTGTACTT
CCACCAAAGATGAATAGTGATGCATTCACTCCCTACTCTGATAAATTCTG
GGTTAATCTCAACAATATCTCTCGTGTCGAAGGACCAAAATTCCGTATAC
TCTCTCATGATCTCAAATTCTTATTGATTCGTTTGGCAAAGGATGAATCT
TTCAGTACCGATTCTAAAGGTGGTGGCAAAGAAAGTAATATTAGAATTGC
ACCAATGGTTGGTCAACTTGGTATGGTTTTATTGGATCAAAAGGTGGGTG
GAGGTAACTCTGCCAATCAATTAAGACGGTCACAATTTGAAAAGACTTTA
GCACAATTCACAACTTTACCAATGGAAACTGGAATCAATATTATGGTTTC
ACTACAGTAACTCATTTCAATTTCATTCATTTCAATTGTCATCGTGATGC
AACCAAAGCAGATAGAAGTATGAAGGTACCAAAAGAAGAATGGGAAGGTG
CTGCACTCAGAAATCAACAAACCAAATGTAATGGTCTTTTCCCTGTACTT
CCACCAAAGATGAATAGTGATGCATTCACTCCCTACTCTGATAAATTCTG
GGTTAATCTCAACAATATCTCTCGTGTCGAAGGACCAAAAATTCCGTATA
CTCTCTCATGATCTCAAATTCTTATTGATTCGTTTGGCAAAGGATGAATC
TTTCAGTACCGATTCTAAAGGTGGTGGCAAAGAAAGTAATATTAGAATTG
CACCAATGTTTGTCCAACTTGGTATGTTTTTATTGGATCAAAAGTTGGTT
GGAGGTAACTCTGCCAATCAATTAAGACGTCCACAATTTGAAAAGACTTT
AGCACAATTCACAACTTTACCATTGGAAACTGCAATCACTTCAATGTATC
AAATGCTATCCGATAATGTACCATACTTTTTAGTGGTTTCAATCTTTTTA
CATTCACCAAAAGAATTTGAAAATCAAAAATTCAATTACCTCACAAAACT
ATTGGCTTATGCTTTTGTTGATTATCTCACCACTAATACAAAGAATGGTT
TAAGTTCTCCAGATGAACCATCAAAAGATAAACTTTTCGATATCACTCGT
CCTTGGTTAATATTCTTCTCTTTGTTATCAAAATTCCATTCAGATCATTA
AACCATCCTCATGTACCGAAGAAAATTGGATTCAAGAAACTAAAAATCAT
TTATCAACAAATTGTACAAAGATTCAGGTAGATGTTAAAGAATTATTAAA
TTGTTTCGAAAATGAATTAAAAGAATTCCAAGATGAAATGGAATTCTTTG
ATGATGAAGGTCTCTTAAAAAATGTTTTATTAAATAACAAAGATTCAAAT
GAATATTTATTAAAATTATATAAATCTGTTAAATCAAATAAAAAATAATT
AAAAAAAATAAAAAAAAATAAATAAATAAATAAAAAAATAATTAAAAA

Gap no gap
Contig length 4748
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 1212402
End point 1208609
Strand (PLUS/MINUS) MINUS
Number of clones 33
Number of EST 62
Link to clone list U16421
List of clone(s)

est1=AHJ781F,1,641
est2=AHJ263F,50,677
est3=VHH352Z,187,759
est4=AHC341F,403,977
est5=SHG845F,568,770
est6=SHH445F,568,1035
est7=AHM536F,574,1147
est8=AHK439F,577,1149
est9=CHH738F,587,1147
est10=AHI517F,589,1255
est11=AHK226F,730,1270
est12=SHG681F,730,1272
est13=AHO689F,736,1318
est14=SHJ722F,774,1395
est15=AHA748F,968,1503
est16=CHQ220F,1095,1567
est17=SHH322F,1281,1892
est18=AHJ479F,1328,1894
est19=CHG323F,1334,1808
est20=AHA436F,1408,2015
est21=VHI533F,1552,2144
est22=VHM492F,1567,2171
est23=AHG521F,1576,2193
est24=VHF301F,1595,2198
est25=AHN161F,1672,2298
est26=AHQ309F,1672,2191
est27=SHG649F,1756,2435
est28=CFF631F,2107,2674
est29=CFF581F,2187,2822
est30=SSL835F,2639,3254
est31=CFF581H,3190,4191
est32=AHM536Z,3928,4687
est33=CHG323Z,3928,4688
est34=AHK460Z,3941,4687
est35=AHO796Z,3953,4694
est36=SHG845Z,3953,4696
est37=CFF581Z,3970,4730
est38=AHC341Z,3982,4739
est39=AHQ309Z,3982,4687
est40=SSL835Z,3982,4748
est41=AHK226Z,3983,4687
est42=VHI533Z,3983,4729
est43=CHH738Z,3991,4663
est44=CFF631Z,4000,4688
est45=AHM673Z,4013,4739
est46=AHA436Z,4015,4740
est47=SHJ722Z,4016,4740
est48=AHJ263Z,4022,4739
est49=AHK439Z,4022,4729
est50=AHN161Z,4025,4739
est51=VHM492Z,4026,4649
est52=CHQ220Z,4038,4540
est53=AHA748Z,4049,4739
est54=AHI517Z,4052,4717
est55=AHJ781Z,4069,4736
est56=SHH322Z,4106,4650
est57=AHG521Z,4107,4687
est58=SHG681Z,4110,4696
est59=VHF301Z,4131,4719
est60=AHJ479Z,4164,4309
est61=SHH445Z,4178,4542
est62=SHG649Z,4254,4740
Translated Amino Acid sequence
ILPCLKIIIYLCTLDRKGAFITKDAKDLEISQKLLATRFEKLKSSKKQAIALAATATATA
TAANASLTSTIEKKIEALSSLLSPNTVNNIALSVASSLLSPQQMQLQIQQQIALQQQQIQ
QQIQQQQQQLNESVSGLKILSPSSSSSSPSGVGATGSENGGGGSGSSSGSSVSGSGSISS
SQDPNILSIFDNDTSNAGANESWDGDDNPIANAWSSKYENYLSNFNVNSSIGEISKSLKP
LSQDELKSKYFKRWYAQVKKRKQQQQQQSSGIGYATQSSFEVLFEEKWLEKLLFNSTSSI
RLEIITLMGILSKNSNSRSLKFLDLLTKILPNATEAGEYSAEFFGLFNSFISTSQDRKIY
LAVKGFIPFICDAIIKEIEHIKSKEGSFSTDVSQGFVLKTLVAILKSFLDVPTLKAKMKK
DNMLEKVLDAFLSLRGVIVQKNKLTEDSVRYLQELMKSLNNESVQDNKKFMAANIKALAK
YQSDGRTPIFIFEQLCNIVCPTKPDPIYQLILFKAASQEEYIRGSMNRNPYTSNTFGGPL
MRDVKNKICKALDLGSFLDDDNGMELLVDNKIIKLDLPIKKVYELVWKKSPQALRTADIN
IPMNVVYRLQGLDGEATEEIIETLNDNNSEEKDPEVEYEITSVMAECGGLESMISMIERI
NDFSIEKELAQLVIKLLYHCCKIKINRQKLLTLNTVGRLLEKLKQAFHQPELSEHLLVII
ESVVSEANRDYLSWFKFFYLTLTS*ryq*ssrtneyvfr*ikrcssnvkskdhssnhkny
sipylwsh*nyglsr*lfhtifkfprv**fkikryqsclss*flyqtygkyssrfkw*ky
sfnhy*awyh*iig*llikllp*kw**d*prmaflfgetsftirfsiikrfsngs*tnsk
ydsri*pyqknsyt*rnswy*ckdwkfs*efirvnr*rq*knlkdck*ys*giedgkiks
cskt*rrcvetigfsstr*tyygkrcsrfn*rfg***rfhlygl*rrlfi*tnrciryly
llkensinisg*nnlstiinnqcrcftfslpk**wrwwwwcfilwfhysnsfqfhsfqls
s*cnqsr*kyegtkrrmgrcctqkstnqm*wsfpctstkde**cihsll**ilg*sqqyl
scrrtkipytls*sqilidsfgkg*ifqyrf*rwwqrk*y*nctngwstwygfigskggw
r*lcqsiktvti*kdfstihnftngnwnqyygfttvthfnfihfnchrdatkadrsmkvp
keewegaalrnqqtkcnglfpvlppkmnsdaftpysdkfwvnlnnisrvegpkipytls*
sqilidsfgkg*ifqyrf*rwwqrk*y*nctnvcptwyvfigskvgwr*lcqsiktsti*
kdfstihnftigncnhfnvsnair*ctilfsgfnlftftkri*kskiqlphktiglcfc*
lshh*ykewfkfsr*tikr*tfryhsslvnillfvikipfrslnhphvpkkigfkklkii
yqqivqrfr*mlkny*ivskmn*knskmkwnslmmkvs*kmfy*itkiqmniy*nyinll
nqiknn*kk*kkink*ikk*lk


Translated Amino Acid sequence (All Frames)
Frame A:
yftmsqnhnlfmys*s*rcfhykgckrs*nlskiisnki*kikiiketshcfgcnsnsns
nss*cfinlnh*ked*siiiitftkyce*yctfcciiitftttnaitnsttnrfttttns
ttnsttattie*icfrfkdfitiffliisiwcwcyw*rkwwww*wk**w**c*w*wfnif
isrskhiinl***yfkcrc*rimgw***snckclviki*klfi*fqcklfnr*nikifet
t*pr*ike*ifqemvcss*kekttttttifrywlcnsikfrgiv*remvreiviqfniin
ss*nnhfdgyfk*e*q**it*ilgspykdsskcnrgr*ifcrvfrtfq*fylnlsrs*dl
fsckrfhsihl*cyhqgd*tyqikgrfi*y*cftrfcfenfscyt*iiprctns*skdee
r*yvrkgigcflitswcyrske*vnrgfctlsprvdeitkq*icsrq*evygc*y*sig*
isigw*nsniyfrttl*yclsnqtrsnlsidtl*scisrgih*rfnes*piyfqylwwst
hercke*dl*sfrfr*flr***wygvisr**dh*igftn*kslrismekestsiknsryq
ysnecslsssrfrw*sn*rnh*ns****l*rkgsrs*i*nhkcyg*mrwfgindlnd*ty
q*flnregigtisn*itlpll*d*n*sskitytqycw*iigeiktsfpstrtfrtfighh
*igs*rsks*lsfvvqillphshiikismklknk*icf*in*tvlk*cqiqrsfkqsqel
fhslpmvtlklwiisltfshhi*iskslmiqnqkipimfiilislpnlwkilvqiqmvev
fvqsllsvvslnhwlity*itslkmvirlakngfplwrnqlyhsf*yy*kv*qwvmnqlk
i*l*nltlskefiylkkqlvlvqrlev*lriy*sqslkamkkpqrl*vilvrnrrwkn*v
mlkniekmc*nnwv*lnkvnilwqtlfqvqlkiwmmmkvslvwfvekvihlnqpmy*vsi
psqrefh*hqwvkqlvhhhqqpmsllhflspqvvvevvvvvlyimvslq*lisisfisiv
ivmqpkqiev*ryqkkngkvlhseinkpnvmvfslyfhqr*ivmhslptlinsglistis
lvskdqnsvyslmisnsy*fvwqrmnlsvpilkvvakkvilelhqwlvnlvwfywikrwv
evtlpin*dghnlkrl*hnsqlyqwklesilwfhysnsfqfhsfqlss*cnqsr*kyegt
krrmgrcctqkstnqm*wsfpctstkde**cihsll**ilg*sqqylscrrtknsvyslm
isnsy*fvwqrmnlsvpilkvvakkvilelhqclsnlvcfywikswlevtlpin*dvhnl
krl*hnsqlyhwklqslqcikcypimyhtf*wfqsfyihqknlkiknsitsqnywlmlll
iispliqrmv*vlqmnhqkinfsislvlg*ysslcyqnsiqiikpsscteenwiqetknh
lstnctkiqvdvkellncfenelkefqdemeffddegllknvllnnkdsneyllklyksv
ksnkk*lkkikknk*inkkiik


Frame B:
ILPCLKIIIYLCTLDRKGAFITKDAKDLEISQKLLATRFEKLKSSKKQAIALAATATATA
TAANASLTSTIEKKIEALSSLLSPNTVNNIALSVASSLLSPQQMQLQIQQQIALQQQQIQ
QQIQQQQQQLNESVSGLKILSPSSSSSSPSGVGATGSENGGGGSGSSSGSSVSGSGSISS
SQDPNILSIFDNDTSNAGANESWDGDDNPIANAWSSKYENYLSNFNVNSSIGEISKSLKP
LSQDELKSKYFKRWYAQVKKRKQQQQQQSSGIGYATQSSFEVLFEEKWLEKLLFNSTSSI
RLEIITLMGILSKNSNSRSLKFLDLLTKILPNATEAGEYSAEFFGLFNSFISTSQDRKIY
LAVKGFIPFICDAIIKEIEHIKSKEGSFSTDVSQGFVLKTLVAILKSFLDVPTLKAKMKK
DNMLEKVLDAFLSLRGVIVQKNKLTEDSVRYLQELMKSLNNESVQDNKKFMAANIKALAK
YQSDGRTPIFIFEQLCNIVCPTKPDPIYQLILFKAASQEEYIRGSMNRNPYTSNTFGGPL
MRDVKNKICKALDLGSFLDDDNGMELLVDNKIIKLDLPIKKVYELVWKKSPQALRTADIN
IPMNVVYRLQGLDGEATEEIIETLNDNNSEEKDPEVEYEITSVMAECGGLESMISMIERI
NDFSIEKELAQLVIKLLYHCCKIKINRQKLLTLNTVGRLLEKLKQAFHQPELSEHLLVII
ESVVSEANRDYLSWFKFFYLTLTS*ryq*ssrtneyvfr*ikrcssnvkskdhssnhkny
sipylwsh*nyglsr*lfhtifkfprv**fkikryqsclss*flyqtygkyssrfkw*ky
sfnhy*awyh*iig*llikllp*kw**d*prmaflfgetsftirfsiikrfsngs*tnsk
ydsri*pyqknsyt*rnswy*ckdwkfs*efirvnr*rq*knlkdck*ys*giedgkiks
cskt*rrcvetigfsstr*tyygkrcsrfn*rfg***rfhlygl*rrlfi*tnrciryly
llkensinisg*nnlstiinnqcrcftfslpk**wrwwwwcfilwfhysnsfqfhsfqls
s*cnqsr*kyegtkrrmgrcctqkstnqm*wsfpctstkde**cihsll**ilg*sqqyl
scrrtkipytls*sqilidsfgkg*ifqyrf*rwwqrk*y*nctngwstwygfigskggw
r*lcqsiktvti*kdfstihnftngnwnqyygfttvthfnfihfnchrdatkadrsmkvp
keewegaalrnqqtkcnglfpvlppkmnsdaftpysdkfwvnlnnisrvegpkipytls*
sqilidsfgkg*ifqyrf*rwwqrk*y*nctnvcptwyvfigskvgwr*lcqsiktsti*
kdfstihnftigncnhfnvsnair*ctilfsgfnlftftkri*kskiqlphktiglcfc*
lshh*ykewfkfsr*tikr*tfryhsslvnillfvikipfrslnhphvpkkigfkklkii
yqqivqrfr*mlkny*ivskmn*knskmkwnslmmkvs*kmfy*itkiqmniy*nyinll
nqiknn*kk*kkink*ikk*lk


Frame C:
fyhvsks*fiyvllivkvlslqrmqkilkslkny*qqdlkn*nhqrnkpllwlqqqqqqq
qqlmlh*pqplkrrlkhyhhyfhqil*iilhfllhhhyfhhnkcnykfnnkslynnnkfn
nkfnnsnnn*mnlfqv*rfyhhllphhlhlvlvllvakmvvvvvevvvvvvlvvvvqylh
lkiqtyyqslimilqmqvltnhgmvmiiqlqmlghqnmktiylism*tlqsvkyqnl*nh
lakmn*rvnisrdgmlklkrennnnnnnlqvlvmqlnqvsryclkrng*rncysiqhhqf
vlk*sl*wvf*vriaivdhlnswislqrffqmqqrqvnilqsfsdfsivlsqplkivrfi
*l*kvsfhsfvmlssrrlnisnqrkvhlvlmfhkvlf*kl*llylnhssmyqllkqr*rk
iic*krywmlsyhfvvlsfkris*prilyvisks**nh*tmnlfktirslwllilkhwln
inrmvelqylfsnnfvilfvqpnqiqsin*yslklhlkrntlevq*ivthilpiplvvhs
*em*rirfvkl*i*vvs*mmimvwsy*siirslnwiyqlkkftn*ygkrvhkh*eqqisi
fq*m*fivfkv*mvkqlkkslkllmiitlkkriqklnmksqvlwlnavvwnq*sq*lnvs
misqsrrnwhn**lnystivvrlklivknylhsillvdywrn*nklsinqnfpniywssl
nr*lakqiviifrgsnsstslshhkdineaqeqmnmfldklngaqvmsnpkiiqaitrii
pfltyghteimdylvdfftpylnfqefddskskdtnhvyhldfftklmentrpdsngrsi
rsiiikrgitkslvdyllnyfpengdktsqewlsslekpalpfvlvllkglamgheptqn
mtlesnlikrihileetagtsakigslaenllesiaegnektskivsdtrkeskmeklsh
aqkhredvlkqlglaqqgkhimanvvpgsiedldddegftcmvcregysfkptdvlgiyt
fskripltsvgettcppssttnvaaslslspsssggggggalyygfttvthfnfihfnch
rdatkadrsmkvpkeewegaalrnqqtkcnglfpvlppkmnsdaftpysdkfwvnlnnis
rvegpkfrilshdlkfllirlakdesfstdskgggkesniriapmvgqlgmvlldqkvgg
gnsanqlrrsqfektlaqfttlpmetginimvslq*lisisfisivivmqpkqiev*ryq
kkngkvlhseinkpnvmvfslyfhqr*ivmhslptlinsglistislvskdqkfrilshd
lkfllirlakdesfstdskgggkesniriapmfvqlgmflldqklvggnsanqlrrpqfe
ktlaqfttlpletaitsmyqmlsdnvpyflvvsiflhspkefenqkfnyltkllayafvd
ylttntknglsspdepskdklfditrpwliffsllskfhsdh*tilmyrrkldsrn*ksf
inklykdsgrc*riiklfrk*ikripr*ngil***rslkkcfik*qrfk*ifikii*ic*
ik*kiikknkkk*ink*knn*k


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U16421-1 (Contig-U16421-1Q)
/CSM_Contig/Contig-U16421-1Q.Seq.d
(4748 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U16421-1 (Contig-U16421-1Q) /CSM_Contig/Conti... 7606 0.0
Contig-U12080-1 (Contig-U12080-1Q) /CSM_Contig/Conti... 607 e-173
Contig-U15513-1 (Contig-U15513-1Q) /CSM_Contig/Conti... 50 3e-05
Contig-U11521-1 (Contig-U11521-1Q) /CSM_Contig/Conti... 50 3e-05
Contig-U15813-1 (Contig-U15813-1Q) /CSM_Contig/Conti... 48 1e-04
Contig-U15603-1 (Contig-U15603-1Q) /CSM_Contig/Conti... 48 1e-04
Contig-U15584-1 (Contig-U15584-1Q) /CSM_Contig/Conti... 48 1e-04
Contig-U11332-1 (Contig-U11332-1Q) /CSM_Contig/Conti... 48 1e-04
Contig-U04444-1 (Contig-U04444-1Q) /CSM_Contig/Conti... 48 1e-04
Contig-U15293-1 (Contig-U15293-1Q) /CSM_Contig/Conti... 46 5e-04

>Contig-U16421-1 (Contig-U16421-1Q) /CSM_Contig/Contig-U16421-1Q.Seq.d
Length = 4748

Score = 7606 bits (3837), Expect = 0.0
Identities = 3837/3837 (100%)
Strand = Plus / Plus


Query: 806 tcttcaggtattggttatgcaactcaatcaagtttcgaggtattgtttgaagagaaatgg 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 tcttcaggtattggttatgcaactcaatcaagtttcgaggtattgtttgaagagaaatgg 865


Query: 866 ttagagaaattgttattcaattcaacatcatcaattcgtcttgaaataatcactttgatg 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 ttagagaaattgttattcaattcaacatcatcaattcgtcttgaaataatcactttgatg 925


Query: 926 ggtattttaagtaagaatagcaatagtagatcacttaaattcttggatctccttacaaag 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 ggtattttaagtaagaatagcaatagtagatcacttaaattcttggatctccttacaaag 985


Query: 986 attcttccaaatgcaacagaggcaggtgaatattctgcagagtttttcggacttttcaat 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 attcttccaaatgcaacagaggcaggtgaatattctgcagagtttttcggacttttcaat 1045


Query: 1046 agttttatctcaacctctcaagatcgtaagatttatttagctgtaaaaggtttcattcca 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 agttttatctcaacctctcaagatcgtaagatttatttagctgtaaaaggtttcattcca 1105


Query: 1106 ttcatttgtgatgctatcatcaaggagattgaacatatcaaatcaaaggaaggttcattt 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1106 ttcatttgtgatgctatcatcaaggagattgaacatatcaaatcaaaggaaggttcattt 1165


Query: 1166 agtactgatgtttcacaaggttttgttttgaaaactttagttgctatacttaaatcattc 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1166 agtactgatgtttcacaaggttttgttttgaaaactttagttgctatacttaaatcattc 1225


Query: 1226 ctcgatgtaccaactcttaaagcaaagatgaagaaagataatatgttagaaaaggtattg 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1226 ctcgatgtaccaactcttaaagcaaagatgaagaaagataatatgttagaaaaggtattg 1285


Query: 1286 gatgctttcttatcacttcgtggtgttatcgttcaaaagaataagttaaccgaggattct 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1286 gatgctttcttatcacttcgtggtgttatcgttcaaaagaataagttaaccgaggattct 1345


Query: 1346 gtacgttatctccaagagttgatgaaatcactaaacaatgaatctgttcaagacaataag 1405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1346 gtacgttatctccaagagttgatgaaatcactaaacaatgaatctgttcaagacaataag 1405


Query: 1406 aagtttatggctgctaatattaaagcattggctaaatatcaatcggatggtagaactcca 1465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1406 aagtttatggctgctaatattaaagcattggctaaatatcaatcggatggtagaactcca 1465


Query: 1466 atatttattttcgaacaactttgtaatattgtttgtccaaccaaaccagatccaatctat 1525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1466 atatttattttcgaacaactttgtaatattgtttgtccaaccaaaccagatccaatctat 1525


Query: 1526 caattgatactctttaaagctgcatctcaagaggaatacattagaggttcaatgaatcgt 1585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1526 caattgatactctttaaagctgcatctcaagaggaatacattagaggttcaatgaatcgt 1585


Query: 1586 aacccatatacttccaatacctttggtggtccactcatgagagatgtaaagaataagatt 1645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1586 aacccatatacttccaatacctttggtggtccactcatgagagatgtaaagaataagatt 1645


Query: 1646 tgtaaagctttagatttaggtagtttcttagatgatgataatggtatggagttattagtc 1705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1646 tgtaaagctttagatttaggtagtttcttagatgatgataatggtatggagttattagtc 1705


Query: 1706 gataataagatcattaaattggatttaccaattaaaaaagtttacgaattagtatggaaa 1765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1706 gataataagatcattaaattggatttaccaattaaaaaagtttacgaattagtatggaaa 1765


Query: 1766 aagagtccacaagcattaagaacagcagatatcaatattccaatgaatgtagtttatcgt 1825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1766 aagagtccacaagcattaagaacagcagatatcaatattccaatgaatgtagtttatcgt 1825


Query: 1826 cttcaaggtttagatggtgaagcaactgaagaaatcattgaaactcttaatgataataac 1885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1826 cttcaaggtttagatggtgaagcaactgaagaaatcattgaaactcttaatgataataac 1885


Query: 1886 tctgaagaaaaggatccagaagttgaatatgaaatcacaagtgttatggctgaatgcggt 1945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1886 tctgaagaaaaggatccagaagttgaatatgaaatcacaagtgttatggctgaatgcggt 1945


Query: 1946 ggtttggaatcaatgatctcaatgattgaacgtatcaatgatttctcaatcgagaaggaa 2005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1946 ggtttggaatcaatgatctcaatgattgaacgtatcaatgatttctcaatcgagaaggaa 2005


Query: 2006 ttggcacaattagtaattaaattactctaccattgttgtaagattaaaattaatcgtcaa 2065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2006 ttggcacaattagtaattaaattactctaccattgttgtaagattaaaattaatcgtcaa 2065


Query: 2066 aaattacttacactcaatactgttggtagattattggagaaattaaaacaagctttccat 2125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2066 aaattacttacactcaatactgttggtagattattggagaaattaaaacaagctttccat 2125


Query: 2126 caaccagaactttccgaacatttattggtcatcattgaatcggtagttagcgaagcaaat 2185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2126 caaccagaactttccgaacatttattggtcatcattgaatcggtagttagcgaagcaaat 2185


Query: 2186 cgtgattatctttcgtggttcaaattcttctacctcactctcacatcataaagatatcaa 2245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2186 cgtgattatctttcgtggttcaaattcttctacctcactctcacatcataaagatatcaa 2245


Query: 2246 tgaagctcaagaacaaatgaatatgtttttagataaattaaacggtgctcaagtaatgtc 2305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2246 tgaagctcaagaacaaatgaatatgtttttagataaattaaacggtgctcaagtaatgtc 2305


Query: 2306 aaatccaaagatcattcaagcaatcacaagaattattccattccttacctatggtcacac 2365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2306 aaatccaaagatcattcaagcaatcacaagaattattccattccttacctatggtcacac 2365


Query: 2366 tgaaattatggattatctcgttgactttttcacaccatatttaaatttccaagagtttga 2425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2366 tgaaattatggattatctcgttgactttttcacaccatatttaaatttccaagagtttga 2425


Query: 2426 tgattcaaaatcaaaagataccaatcatgtttatcatcttgatttctttaccaaacttat 2485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2426 tgattcaaaatcaaaagataccaatcatgtttatcatcttgatttctttaccaaacttat 2485


Query: 2486 ggaaaatactcgtccagattcaaatggtagaagtattcgttcaatcattattaagcgtgg 2545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2486 ggaaaatactcgtccagattcaaatggtagaagtattcgttcaatcattattaagcgtgg 2545


Query: 2546 tatcactaaatcattggttgattacttattaaattacttccctgaaaatggtgataagac 2605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2546 tatcactaaatcattggttgattacttattaaattacttccctgaaaatggtgataagac 2605


Query: 2606 tagccaagaatggctttcctctttggagaaaccagctttaccattcgttttagtattatt 2665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2606 tagccaagaatggctttcctctttggagaaaccagctttaccattcgttttagtattatt 2665


Query: 2666 aaaaggtttagcaatgggtcatgaaccaactcaaaatatgactctagaatctaaccttat 2725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2666 aaaaggtttagcaatgggtcatgaaccaactcaaaatatgactctagaatctaaccttat 2725


Query: 2726 caaaagaattcatatacttgaagaaacagctggtactagtgcaaagattggaagtttagc 2785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2726 caaaagaattcatatacttgaagaaacagctggtactagtgcaaagattggaagtttagc 2785


Query: 2786 tgagaatttattagagtcaatcgctgaaggcaatgaaaaaacctcaaagattgtaagtga 2845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2786 tgagaatttattagagtcaatcgctgaaggcaatgaaaaaacctcaaagattgtaagtga 2845


Query: 2846 tactcgtaaggaatcgaagatggaaaaattaagtcatgctcaaaaacatagagaagatgt 2905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2846 tactcgtaaggaatcgaagatggaaaaattaagtcatgctcaaaaacatagagaagatgt 2905


Query: 2906 gttgaaacaattgggtttagctcaacaaggtaaacatattatggcaaacgttgttccagg 2965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2906 gttgaaacaattgggtttagctcaacaaggtaaacatattatggcaaacgttgttccagg 2965


Query: 2966 ttcaattgaagatttggatgatgatgaaggtttcacttgtatggtttgtagagaaggtta 3025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2966 ttcaattgaagatttggatgatgatgaaggtttcacttgtatggtttgtagagaaggtta 3025


Query: 3026 ttcatttaaaccaaccgatgtattaggtatctataccttctcaaagagaattccattaac 3085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3026 ttcatttaaaccaaccgatgtattaggtatctataccttctcaaagagaattccattaac 3085


Query: 3086 atcagtgggtgaaacaacttgtccaccatcatcaacaaccaatgtcgctgcttcactttc 3145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3086 atcagtgggtgaaacaacttgtccaccatcatcaacaaccaatgtcgctgcttcactttc 3145


Query: 3146 tctctccccaagtagtagtggaggtggtggtggtggtgctttatattatggtttcactac 3205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3146 tctctccccaagtagtagtggaggtggtggtggtggtgctttatattatggtttcactac 3205


Query: 3206 agtaactcatttcaatttcattcatttcaattgtcatcgtgatgcaaccaaagcagatag 3265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3206 agtaactcatttcaatttcattcatttcaattgtcatcgtgatgcaaccaaagcagatag 3265


Query: 3266 aagtatgaaggtaccaaaagaagaatgggaaggtgctgcactcagaaatcaacaaaccaa 3325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3266 aagtatgaaggtaccaaaagaagaatgggaaggtgctgcactcagaaatcaacaaaccaa 3325


Query: 3326 atgtaatggtcttttccctgtacttccaccaaagatgaatagtgatgcattcactcccta 3385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3326 atgtaatggtcttttccctgtacttccaccaaagatgaatagtgatgcattcactcccta 3385


Query: 3386 ctctgataaattctgggttaatctcaacaatatctctcgtgtcgaaggaccaaaattccg 3445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3386 ctctgataaattctgggttaatctcaacaatatctctcgtgtcgaaggaccaaaattccg 3445


Query: 3446 tatactctctcatgatctcaaattcttattgattcgtttggcaaaggatgaatctttcag 3505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3446 tatactctctcatgatctcaaattcttattgattcgtttggcaaaggatgaatctttcag 3505


Query: 3506 taccgattctaaaggtggtggcaaagaaagtaatattagaattgcaccaatggttggtca 3565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3506 taccgattctaaaggtggtggcaaagaaagtaatattagaattgcaccaatggttggtca 3565


Query: 3566 acttggtatggttttattggatcaaaaggtgggtggaggtaactctgccaatcaattaag 3625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3566 acttggtatggttttattggatcaaaaggtgggtggaggtaactctgccaatcaattaag 3625


Query: 3626 acggtcacaatttgaaaagactttagcacaattcacaactttaccaatggaaactggaat 3685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3626 acggtcacaatttgaaaagactttagcacaattcacaactttaccaatggaaactggaat 3685


Query: 3686 caatattatggtttcactacagtaactcatttcaatttcattcatttcaattgtcatcgt 3745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3686 caatattatggtttcactacagtaactcatttcaatttcattcatttcaattgtcatcgt 3745


Query: 3746 gatgcaaccaaagcagatagaagtatgaaggtaccaaaagaagaatgggaaggtgctgca 3805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3746 gatgcaaccaaagcagatagaagtatgaaggtaccaaaagaagaatgggaaggtgctgca 3805


Query: 3806 ctcagaaatcaacaaaccaaatgtaatggtcttttccctgtacttccaccaaagatgaat 3865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3806 ctcagaaatcaacaaaccaaatgtaatggtcttttccctgtacttccaccaaagatgaat 3865


Query: 3866 agtgatgcattcactccctactctgataaattctgggttaatctcaacaatatctctcgt 3925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3866 agtgatgcattcactccctactctgataaattctgggttaatctcaacaatatctctcgt 3925


Query: 3926 gtcgaaggaccaaaaattccgtatactctctcatgatctcaaattcttattgattcgttt 3985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3926 gtcgaaggaccaaaaattccgtatactctctcatgatctcaaattcttattgattcgttt 3985


Query: 3986 ggcaaaggatgaatctttcagtaccgattctaaaggtggtggcaaagaaagtaatattag 4045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3986 ggcaaaggatgaatctttcagtaccgattctaaaggtggtggcaaagaaagtaatattag 4045


Query: 4046 aattgcaccaatgtttgtccaacttggtatgtttttattggatcaaaagttggttggagg 4105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4046 aattgcaccaatgtttgtccaacttggtatgtttttattggatcaaaagttggttggagg 4105


Query: 4106 taactctgccaatcaattaagacgtccacaatttgaaaagactttagcacaattcacaac 4165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4106 taactctgccaatcaattaagacgtccacaatttgaaaagactttagcacaattcacaac 4165


Query: 4166 tttaccattggaaactgcaatcacttcaatgtatcaaatgctatccgataatgtaccata 4225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4166 tttaccattggaaactgcaatcacttcaatgtatcaaatgctatccgataatgtaccata 4225


Query: 4226 ctttttagtggtttcaatctttttacattcaccaaaagaatttgaaaatcaaaaattcaa 4285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4226 ctttttagtggtttcaatctttttacattcaccaaaagaatttgaaaatcaaaaattcaa 4285


Query: 4286 ttacctcacaaaactattggcttatgcttttgttgattatctcaccactaatacaaagaa 4345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4286 ttacctcacaaaactattggcttatgcttttgttgattatctcaccactaatacaaagaa 4345


Query: 4346 tggtttaagttctccagatgaaccatcaaaagataaacttttcgatatcactcgtccttg 4405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4346 tggtttaagttctccagatgaaccatcaaaagataaacttttcgatatcactcgtccttg 4405


Query: 4406 gttaatattcttctctttgttatcaaaattccattcagatcattaaaccatcctcatgta 4465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4406 gttaatattcttctctttgttatcaaaattccattcagatcattaaaccatcctcatgta 4465


Query: 4466 ccgaagaaaattggattcaagaaactaaaaatcatttatcaacaaattgtacaaagattc 4525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4466 ccgaagaaaattggattcaagaaactaaaaatcatttatcaacaaattgtacaaagattc 4525


Query: 4526 aggtagatgttaaagaattattaaattgtttcgaaaatgaattaaaagaattccaagatg 4585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4526 aggtagatgttaaagaattattaaattgtttcgaaaatgaattaaaagaattccaagatg 4585


Query: 4586 aaatggaattctttgatgatgaaggtctcttaaaaaatgttttattaaataacaaag 4642
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4586 aaatggaattctttgatgatgaaggtctcttaaaaaatgttttattaaataacaaag 4642


Score = 642 bits (324), Expect = 0.0
Identities = 324/324 (100%)
Strand = Plus / Plus


Query: 1 tattttaccatgtctcaaaatcataatttatttatgtactcttgatcgtaaaggtgcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tattttaccatgtctcaaaatcataatttatttatgtactcttgatcgtaaaggtgcttt 60


Query: 61 cattacaaaggatgcaaaagatcttgaaatctctcaaaaattattagcaacaagatttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cattacaaaggatgcaaaagatcttgaaatctctcaaaaattattagcaacaagatttga 120


Query: 121 aaaattaaaatcatcaaagaaacaagccattgctttggctgcaacagcaacagcaacagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaattaaaatcatcaaagaaacaagccattgctttggctgcaacagcaacagcaacagc 180


Query: 181 aacagcagctaatgcttcattaacctcaaccattgaaaagaagattgaagcattatcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacagcagctaatgcttcattaacctcaaccattgaaaagaagattgaagcattatcatc 240


Query: 241 attactttcaccaaatactgtgaataatattgcactttctgttgcatcatcattactttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attactttcaccaaatactgtgaataatattgcactttctgttgcatcatcattactttc 300


Query: 301 accacaacaaatgcaattacaaat 324
||||||||||||||||||||||||
Sbjct: 301 accacaacaaatgcaattacaaat 324


Score = 507 bits (256), Expect = e-143
Identities = 256/256 (100%)
Strand = Plus / Plus


Query: 530 tcaatatcttcatctcaagatccaaacatattatcaatctttgataatgatacttcaaat 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tcaatatcttcatctcaagatccaaacatattatcaatctttgataatgatacttcaaat 589


Query: 590 gcaggtgctaacgaatcatgggatggtgatgataatccaattgcaaatgcttggtcatca 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gcaggtgctaacgaatcatgggatggtgatgataatccaattgcaaatgcttggtcatca 649


Query: 650 aaatatgaaaactatttatctaatttcaatgtaaactcttcaatcggtgaaatatcaaaa 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 aaatatgaaaactatttatctaatttcaatgtaaactcttcaatcggtgaaatatcaaaa 709


Query: 710 tctttgaaaccacttagccaagatgaattaaagagtaaatatttcaagagatggtatgct 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 tctttgaaaccacttagccaagatgaattaaagagtaaatatttcaagagatggtatgct 769


Query: 770 caagttaaaaagagaa 785
||||||||||||||||
Sbjct: 770 caagttaaaaagagaa 785


Score = 182 bits (92), Expect = 3e-45
Identities = 92/92 (100%)
Strand = Plus / Plus


Query: 389 ttgaatgaatctgtttcaggtttaaagattttatcaccatcttcttcctcatcatctcca 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ttgaatgaatctgtttcaggtttaaagattttatcaccatcttcttcctcatcatctcca 448


Query: 449 tctggtgttggtgctactggtagcgaaaatgg 480
||||||||||||||||||||||||||||||||
Sbjct: 449 tctggtgttggtgctactggtagcgaaaatgg 480


>Contig-U12080-1 (Contig-U12080-1Q) /CSM_Contig/Contig-U12080-1Q.Seq.d
Length = 2323

Score = 607 bits (306), Expect = e-173
Identities = 311/313 (99%)
Strand = Plus / Plus


Query: 12 gtctcaaaatcataatttatttatgtactcttgatcgtaaaggtgctttcattacaaagg 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1608 gtctcaaaatcataatttatttatgtactcttgatcgtaaaggtgctttcattacaaagg 1667


Query: 72 atgcaaaagatcttgaaatctctcaaaaattattagcaacaagatttgaaaaattaaaat 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1668 atgcaaaagatcttgaaatctctcaaaaattattagcaacaagatttgaaaaattaaaat 1727


Query: 132 catcaaagaaacaagccattgctttggctgcaacagcaacagcaacagcaacagcagcta 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1728 catcaaagaaacaagccattgctttggctgcaacagcaacagcaacagcaacagcagata 1787


Query: 192 atgcttcattaacctcaaccattgaaaagaagattgaagcattatcatcattactttcac 251
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1788 atgcttcattaacntcaaccattgaaaagaagattgaagcattatcatcattactttcac 1847


Query: 252 caaatactgtgaataatattgcactttctgttgcatcatcattactttcaccacaacaaa 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1848 caaatactgtgaataatattgcactttctgttgcatcatcattactttcaccacaacaaa 1907


Query: 312 tgcaattacaaat 324
|||||||||||||
Sbjct: 1908 tgcaattacaaat 1920


>Contig-U15513-1 (Contig-U15513-1Q) /CSM_Contig/Contig-U15513-1Q.Seq.d
Length = 2566

Score = 50.1 bits (25), Expect = 3e-05
Identities = 28/29 (96%)
Strand = Plus / Plus


Query: 162 caacagcaacagcaacagcaacagcagct 190
||||||||||||||||||||||| |||||
Sbjct: 1334 caacagcaacagcaacagcaacaacagct 1362


Score = 36.2 bits (18), Expect = 0.48
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 161 gcaacagcaacagcaaca 178
||||||||||||||||||
Sbjct: 1339 gcaacagcaacagcaaca 1356


Score = 32.2 bits (16), Expect = 7.5
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 3168 ggtggtggtggtggtg 3183
||||||||||||||||
Sbjct: 1532 ggtggtggtggtggtg 1547


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 87,638
Number of Sequences: 8402
Number of extensions: 87638
Number of successful extensions: 10687
Number of sequences better than 10.0: 575
length of query: 4748
length of database: 8,075,542
effective HSP length: 18
effective length of query: 4730
effective length of database: 7,924,306
effective search space: 37481967380
effective search space used: 37481967380
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 3.31
Homology vs DNA
Query= Contig-U16421-1 (Contig-U16421-1Q) /CSM_Contig/Contig-U16421-1Q.Seq.d
(4748 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ355032) Dictyostelium discoideum cDNA clone:dda55d18, 3' ... 1386 0.0 3
(BJ395050) Dictyostelium discoideum cDNA clone:dds37a14, 5' ... 1348 0.0 1
(BJ359081) Dictyostelium discoideum cDNA clone:ddc12a21, 5' ... 1243 0.0 1
(BJ337482) Dictyostelium discoideum cDNA clone:dda57i15, 5' ... 1243 0.0 1
(BJ333809) Dictyostelium discoideum cDNA clone:dda44i05, 5' ... 1225 0.0 1
(BJ425477) Dictyostelium discoideum cDNA clone:ddv55h24, 5' ... 1199 0.0 1
(BJ421186) Dictyostelium discoideum cDNA clone:ddv41b01, 5' ... 1197 0.0 1
(BJ423152) Dictyostelium discoideum cDNA clone:ddv48a09, 5' ... 1176 0.0 1
(BJ396575) Dictyostelium discoideum cDNA clone:dds43l05, 5' ... 1172 0.0 1
(BJ348194) Dictyostelium discoideum cDNA clone:dda32p11, 3' ... 1124 0.0 1
(BJ352809) Dictyostelium discoideum cDNA clone:dda48a05, 3' ... 1100 0.0 1
(BJ379232) Dictyostelium discoideum cDNA clone:ddc34n05, 3' ... 1021 0.0 2
(BJ338275) Dictyostelium discoideum cDNA clone:dda60a24, 5' ... 1019 0.0 2
(BJ355288) Dictyostelium discoideum cDNA clone:dda56g09, 3' ... 1001 0.0 2
(BJ353835) Dictyostelium discoideum cDNA clone:dda51h16, 3' ... 977 0.0 2
(BJ407072) Dictyostelium discoideum cDNA clone:dds37j12, 3' ... 971 0.0 2
(BJ356642) Dictyostelium discoideum cDNA clone:dda60p23, 3' ... 969 0.0 2
(BJ359010) Dictyostelium discoideum cDNA clone:ddc12m08, 5' ... 950 0.0 2
(BJ353734) Dictyostelium discoideum cDNA clone:dda51c08, 3' ... 902 0.0 2
(BJ441908) Dictyostelium discoideum cDNA clone:ddv48a09, 3' ... 900 0.0 2
(BJ357271) Dictyostelium discoideum cDNA clone:dda63b03, 3' ... 900 0.0 2
(BJ349058) Dictyostelium discoideum cDNA clone:dda35b11, 3' ... 898 0.0 2
(BJ334836) Dictyostelium discoideum cDNA clone:dda48a05, 5' ... 894 0.0 2
(BJ330378) Dictyostelium discoideum cDNA clone:dda31h10, 5' ... 888 0.0 2
(BJ372384) Dictyostelium discoideum cDNA clone:ddc12m08, 3' ... 870 0.0 2
(BJ372464) Dictyostelium discoideum cDNA clone:ddc12a21, 3' ... 852 0.0 3
(BJ347835) Dictyostelium discoideum cDNA clone:dda31h10, 3' ... 841 0.0 2
(BJ444277) Dictyostelium discoideum cDNA clone:ddv55h24, 3' ... 827 0.0 2
(BJ353793) Dictyostelium discoideum cDNA clone:dda51n10, 3' ... 827 0.0 2
(BJ353300) Dictyostelium discoideum cDNA clone:dda49m16, 3' ... 827 0.0 2
(BJ358236) Dictyostelium discoideum cDNA clone:dda56a20, 3' ... 658 0.0 2
(BJ335366) Dictyostelium discoideum cDNA clone:dda49n20, 5' ... 646 0.0 2
(BJ395246) Dictyostelium discoideum cDNA clone:dds38l05, 5' ... 642 0.0 2
(BJ407628) Dictyostelium discoideum cDNA clone:dds43l05, 3' ... 632 0.0 2
(BJ355597) Dictyostelium discoideum cDNA clone:dda57i15, 3' ... 494 0.0 3
(BJ380211) Dictyostelium discoideum cDNA clone:ddc37l09, 3' ... 432 0.0 3
(BJ330706) Dictyostelium discoideum cDNA clone:dda32p11, 5' ... 1063 0.0 1
(BJ335755) Dictyostelium discoideum cDNA clone:dda51n10, 5' ... 684 0.0 2
(BJ366004) Dictyostelium discoideum cDNA clone:ddc37l09, 5' ... 678 0.0 2
(BJ338775) Dictyostelium discoideum cDNA clone:dda63b03, 5' ... 1031 0.0 1
(BJ353585) Dictyostelium discoideum cDNA clone:dda50b21, 3' ... 1023 0.0 1
(BJ351629) Dictyostelium discoideum cDNA clone:dda44i05, 3' ... 664 0.0 2
(BJ335710) Dictyostelium discoideum cDNA clone:dda51c08, 5' ... 924 0.0 2
(BJ395128) Dictyostelium discoideum cDNA clone:dds37a22, 5' ... 920 0.0 2
(BJ337121) Dictyostelium discoideum cDNA clone:dda56g09, 5' ... 680 0.0 4
(BJ407315) Dictyostelium discoideum cDNA clone:dds38l05, 3' ... 668 0.0 3
(BJ365112) Dictyostelium discoideum cDNA clone:ddc34n05, 5' ... 942 0.0 1
(BJ370425) Dictyostelium discoideum cDNA clone:ddc54g06, 5' ... 938 0.0 1
(BJ407181) Dictyostelium discoideum cDNA clone:dds37a22, 3' ... 607 0.0 2
(BJ439602) Dictyostelium discoideum cDNA clone:ddv41b01, 3' ... 652 0.0 2
(BJ385172) Dictyostelium discoideum cDNA clone:ddc54g06, 3' ... 454 0.0 2
(BJ335570) Dictyostelium discoideum cDNA clone:dda50b21, 5' ... 581 0.0 3
(BJ335293) Dictyostelium discoideum cDNA clone:dda49m16, 5' ... 502 0.0 3
(BJ331413) Dictyostelium discoideum cDNA clone:dda35b11, 5' ... 394 0.0 5
(BJ395301) Dictyostelium discoideum cDNA clone:dds38j12, 5' ... 434 0.0 3
(BJ407101) Dictyostelium discoideum cDNA clone:dds37a14, 3' ... 371 0.0 2
(BJ441071) Dictyostelium discoideum cDNA clone:ddv45h13, 3' ... 424 0.0 3
(BJ407380) Dictyostelium discoideum cDNA clone:dds38j12, 3' ... 513 0.0 3
(BJ406082) Dictyostelium discoideum cDNA clone:dds34h03, 3' ... 565 e-156 1
(AU074778) Dictyostelium discoideum slug cDNA, clone SSL835. 476 e-129 1
(BJ435080) Dictyostelium discoideum cDNA clone:ddv26b05, 3' ... 385 e-104 2
(BJ395023) Dictyostelium discoideum cDNA clone:dds37j12, 5' ... 367 e-100 2
(C93891) Dictyostelium discoideum slug cDNA, clone SSL835. 180 2e-92 8
(BJ353370) Dictyostelium discoideum cDNA clone:dda49n20, 3' ... 139 1e-27 1
(BJ384514) Dictyostelium discoideum cDNA clone:ddc49a24, 3' ... 50 3e-16 4
(AP006497) Cyanidioschyzon merolae DNA, chromosome 15, compl... 58 1e-06 2
(AE013599) Drosophila melanogaster chromosome 2R, complete s... 58 3e-05 2
(AE014298) Drosophila melanogaster chromosome X, complete se... 58 3e-05 2
(EB662792) 1W_JR_A10 pAPO Cenchrus ciliaris cDNA 5', mRNA se... 48 5e-05 2
(EB669410) 25X_JR_F04 pAPO Cenchrus ciliaris cDNA 5', mRNA s... 48 5e-05 2
(BZ374072) ie18g06.g2 WGS-ZmaysF (DH5a methyl filtered) Zea ... 58 7e-05 2
(CC603980) OGUHA58TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 58 8e-05 2
(CG376198) OG0GQ76TH ZM_0.7_1.5_KB Zea mays genomic clone ZM... 58 9e-05 2
(CG109493) PUFZX51TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 58 9e-05 2
(CG197954) PUFMZ23TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 58 9e-05 2
(EF195759) Tetraodon nigroviridis suppressor of cytokine sig... 62 2e-04 1
(AC122744) Mus musculus chromosome 5, clone RP23-37I24, comp... 62 2e-04 1
(FD490828) Ltu01b_67_A07_C012.b1 Liriodendron Flower Bud Lib... 62 2e-04 1
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 54 2e-04 9
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084... 54 3e-04 11
(EX663158) JS1C583JG Salt stressed Fragaria vesca (strain Ha... 46 6e-04 3
(EF059073) Synthetic construct Saccharomyces cerevisiae clon... 60 8e-04 1
(U33007) Saccharomyces cerevisiae chromosome IV lambda 3641 ... 60 8e-04 1
(U23812) Saccharomyces cerevisiae RNA polymerase II holoenzy... 60 8e-04 1
(U09176) Saccharomyces cerevisiae Sca1p (SCA1) gene, complet... 60 8e-04 1
(CP000497) Pichia stipitis CBS 6054 chromosome 3, complete s... 60 8e-04 1
(DJ025872) Genome-wide DNA marker of Saccharomyces cerevisiae. 60 8e-04 1
(AR778483) Sequence 355 from patent US 6949356. 60 8e-04 1
(AR527938) Sequence 241 from patent US 6723837. 60 8e-04 1
(AC200622) Zea mays chromosome 10 clone CH201-13E19; ZMMBBc0... 60 8e-04 1
(DX785182) 2620143 VV07 Ustilago maydis genomic clone 115871... 60 8e-04 1
(DX766872) 2595027 VV07 Ustilago maydis genomic clone 111494... 60 8e-04 1
(DX760219) 2507438 VV03 Ustilago maydis genomic clone 107500... 60 8e-04 1
(DX748017) 2472643 VV03 Ustilago maydis genomic clone 106822... 60 8e-04 1
(DX740630) 2309376 VV03 Ustilago maydis genomic clone 860753... 60 8e-04 1
(DX706630) 2520666 VV03 Ustilago maydis genomic clone 108626... 60 8e-04 1
(DX690873) 2430075 VV03 Ustilago maydis genomic clone 102485... 60 8e-04 1
(DX674677) 2215829 VV03 Ustilago maydis genomic clone 876360... 60 8e-04 1
(DX660913) 2087636 VV02 Ustilago maydis genomic clone 810670... 60 8e-04 1
(EB056738) StheSEQ2450 Sporotrichum thermophile pBluescript ... 60 8e-04 1
(DV607407) EST1210403 Glossina morsitans morsitans Fat body ... 60 8e-04 1
(DV607406) EST1210402 Glossina morsitans morsitans Fat body ... 60 8e-04 1
(FE854225) CAFS999.fwd CAFS Pichia stipitis oxygen limited d... 60 8e-04 1
(EB491261) 1099341392443 12-DrosW-norm-1P5Kb Drosophila will... 58 0.001 2
(DX632192) 2291267 VV02 Ustilago maydis genomic clone 941080... 58 0.003 2
(AJ534950) Dictyostelium discoideum mRNA for NAD(+) ADP-ribo... 38 0.003 5
(DX761044) 2515290 VV03 Ustilago maydis genomic clone 108153... 58 0.003 2
(EU906980) Cynoglossus semilaevis microsatellite Cyse108 seq... 58 0.003 1
(CR788289) Zebrafish DNA sequence from clone DKEY-176H21. 58 0.003 1
(BX000463) Zebrafish DNA sequence from clone CH211-266I2 in ... 58 0.003 1
(AJ012206) Salmo salar DNA for a cryptic repeat. 58 0.003 1
(EF059308) Synthetic construct Saccharomyces cerevisiae clon... 58 0.003 1
(EF058927) Synthetic construct Saccharomyces cerevisiae clon... 58 0.003 1
(AJ305344) Expression vector pEUKA4-crgA. 58 0.003 1
(AB385115) Synthetic construct DNA, clone: pF1KB5528, Homo s... 58 0.003 1
(G77260) S208P6557FA5.T0 129S1/SvImJ Mus musculus STS genomi... 58 0.003 1
(G64267) 10 Human Homo sapiens STS cDNA, sequence tagged site. 58 0.003 1
(G09716) human STS CHLC.GCT10F11.P16025 clone GCT10F11, sequ... 58 0.003 1
(BV584392) G591P621188RC10.T0 Clint Pan troglodytes verus ST... 58 0.003 1
(BV583899) G591P625310RA2.T0 Clint Pan troglodytes verus STS... 58 0.003 1
(BV582795) G591P620505RA8.T0 Clint Pan troglodytes verus STS... 58 0.003 1
(BV560252) pyv95h03.b1 Clint Pan troglodytes verus STS genom... 58 0.003 1
(AB148308) Homo sapiens DNA, STS on chromosome 20, D20S0540i... 58 0.003 1
(BX323871) Mouse DNA sequence from clone RP24-107M14 on chro... 58 0.003 1
(AL731853) Mouse DNA sequence from clone RP23-128G5 on chrom... 58 0.003 1
(AC160393) Mus musculus BAC clone RP23-136M3 from chromosome... 58 0.003 1
(AC154783) Mus musculus BAC clone RP24-466C8 from 12, comple... 58 0.003 1
(AC154318) Mus musculus BAC clone RP23-316D19 from chromosom... 58 0.003 1
(AC142413) Mus musculus BAC clone RP23-361O2 from 6, complet... 58 0.003 1
(AC133950) Mus musculus BAC clone RP24-243C16 from chromosom... 58 0.003 1
(AC125220) Mus musculus BAC clone RP23-70H20 from 15, comple... 58 0.003 1
(AC124367) Mus musculus BAC clone RP24-545D20 from chromosom... 58 0.003 1
(AC116387) Mus musculus chromosome 18, clone RP23-37P9, comp... 58 0.003 1
(AC113974) Mus musculus chromosome 18, clone RP23-140D3, com... 58 0.003 1
(AC111069) Mus musculus chromosome 18, clone RP24-164O22, co... 58 0.003 1
(AC110375) Mus musculus BAC clone RP23-409L20 from 18, compl... 58 0.003 1
(AC100734) Mus musculus chromosome 15, clone RP24-316L11, co... 58 0.003 1
(AC021063) Mus Musculus Chromosome 18 RP23-179K16, complete... 58 0.003 1
(AF330030) Presbytis entellus SCA2 gene, partial sequence. 58 0.003 1
(Z49705) S.cerevisiae chromosome XIII cosmid 8520. 58 0.003 1
(Z35977) S.cerevisiae chromosome II reading frame ORF YBR108w. 58 0.003 1
(X78993) S.cerevisiae genomic DNA 70kb region of the right a... 58 0.003 1
(X59262) S. cerevisiae SLT2 gene for protein kinase SLT2, a ... 58 0.003 1
(U33330) Spinacia oleracea gibberellin 20-oxidase mRNA, comp... 58 0.003 1
(U11582) Saccharomyces cerevisiae chromosome VIII cosmid 9433. 58 0.003 1
(U00062) Saccharomyces cerevisiae chromosome VIII cosmid 8179. 58 0.003 1
(M80368) Neurospora crassa pathway-specific regulatory prote... 58 0.003 1
(M57383) Saccharomyces cerevisiae negative phospholipid bios... 58 0.003 1
(FM992693) Candida dubliniensis CD36 chromosome 6, complete ... 58 0.003 1
(EU855737) Penicillium decumbens strain 114-2 xlnR gene, par... 58 0.003 1
(CU638743) Podospora anserina genomic DNA chromosome 3, supe... 58 0.003 1
(CU633901) Podospora anserina genomic DNA chromosome 1, supe... 58 0.003 1
(CU633865) Podospora anserina genomic DNA chromosome 5, supe... 58 0.003 1
(CU225341) Populus EST from leave. 58 0.003 1
(CR962126) Medicago truncatula chromosome 5 clone mth2-143k7... 58 0.003 1
(CR382132) Yarrowia lipolytica strain CLIB122 chromosome F c... 58 0.003 1
(CR382129) Yarrowia lipolytica strain CLIB122 chromosome C c... 58 0.003 1
(CR382122) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 58 0.003 1
(BX294026) Neurospora crassa DNA linkage group V BAC contig ... 58 0.003 1
(AY558103) Saccharomyces cerevisiae clone FLH113406.01X YHL0... 58 0.003 1
(AP009731) Lotus japonicus genomic DNA, chromosome 1, clone:... 58 0.003 1
(AP008212) Oryza sativa (japonica cultivar-group) genomic DN... 58 0.003 1
(AP007161) Aspergillus oryzae RIB40 genomic DNA, SC012. 58 0.003 1
(AP001129) Oryza sativa Japonica Group genomic DNA, chromoso... 58 0.003 1
(AP000616) Oryza sativa Japonica Group genomic DNA, chromoso... 58 0.003 1
(AM920437) Penicillium chrysogenum Wisconsin 54-1255 complet... 58 0.003 1
(AM920421) Penicillium chrysogenum Wisconsin 54-1255 complet... 58 0.003 1
(AM452086) Vitis vinifera contig VV78X159888.5, whole genome... 58 0.003 1
(AM430754) Vitis vinifera, whole genome shotgun sequence, co... 58 0.003 1
(AM424813) Vitis vinifera contig VV78X221548.3, whole genome... 58 0.003 1
(AM397260) Ustilago scitaminea microsatellite DNA, locus mUs... 58 0.003 1
(AK110046) Oryza sativa Japonica Group cDNA clone:002-160-C0... 58 0.003 1
(AK107585) Oryza sativa Japonica Group cDNA clone:002-130-E0... 58 0.003 1
(AK100838) Oryza sativa Japonica Group cDNA clone:J023123E20... 58 0.003 1
(AJ250998) Mucor circinelloides crgA gene for carotenoid reg... 58 0.003 1
(AC212845) Populus trichocarpa clone POP021-P21, complete se... 58 0.003 1
(AC146692) Medicago truncatula clone mth2-7n20, complete seq... 58 0.003 1
(AB127956) Colletotrichum lagenarium CPK1 gene for catalytic... 58 0.003 1
(GC695608) Sequence 4981 from patent US 6812339. 58 0.003 1
(FB986901) Sequence 376 from Patent EP1918386. 58 0.003 1
(EA697843) Sequence 76722 from patent US 7365185. 58 0.003 1
(EA396893) Sequence 45717 from patent US 7314974. 58 0.003 1
(EA251743) Sequence 1 from patent US 7232890. 58 0.003 1
(EA248589) Sequence 175 from patent US 7229784. 58 0.003 1
(EA130932) Sequence 53 from patent US 7220557. 58 0.003 1
(DM006803) METHODS TO IDENTIFY LIGANDS OF HORMONE NUCLEAR RE... 58 0.003 1
(DM006802) METHODS TO IDENTIFY LIGANDS OF HORMONE NUCLEAR RE... 58 0.003 1
(DL436455) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS. 58 0.003 1
(DL344661) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS. 58 0.003 1
(DL265877) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS. 58 0.003 1
(DJ472441) Method for analysing genome using microsatellite ... 58 0.003 1
(DJ302904) Method for identification of useful proteins deri... 58 0.003 1
(DJ211110) Method for identification of useful proteins deri... 58 0.003 1
(DJ132326) Method for identification of useful proteins deri... 58 0.003 1
(DJ025881) Genome-wide DNA marker of Saccharomyces cerevisiae. 58 0.003 1
(DJ025876) Genome-wide DNA marker of Saccharomyces cerevisiae. 58 0.003 1
(DJ025870) Genome-wide DNA marker of Saccharomyces cerevisiae. 58 0.003 1
(DJ008681) SULFS AS MODIFIERS OF THE BETA CATENIN PATHWAY AN... 58 0.003 1
(DI084110) Meth1 and Meth2 Polynucleotides and Polypeptides. 58 0.003 1
(DD355396) GENE EXPRESSION PROFILING IN BIOPSIED TUMOR TISSUES. 58 0.003 1
(DD219303) GENE EXPRESSION PROFILING IN BIOPSIED TUMOR TISSUES. 58 0.003 1
(DD139818) Sulfatases and methods of use thereof. 58 0.003 1
(CS618235) Sequence 155 from Patent WO2006055786. 58 0.003 1
(CS618233) Sequence 153 from Patent WO2006055786. 58 0.003 1
(CS050236) Sequence 20 from Patent WO2005021757. 58 0.003 1
(CS045179) Sequence 5733 from Patent WO2005019258. 58 0.003 1
(CS041369) Sequence 1923 from Patent WO2005019258. 58 0.003 1
(CS041365) Sequence 1919 from Patent WO2005019258. 58 0.003 1
(CS041107) Sequence 1661 from Patent WO2005019258. 58 0.003 1
(CS036227) Sequence 5733 from Patent WO2005016962. 58 0.003 1
(CS032417) Sequence 1923 from Patent WO2005016962. 58 0.003 1
(CS032413) Sequence 1919 from Patent WO2005016962. 58 0.003 1
(CS032155) Sequence 1661 from Patent WO2005016962. 58 0.003 1
(CQ730100) Sequence 16034 from Patent WO02068579. 58 0.003 1
(CQ604971) Sequence 32729 from Patent WO0171042. 58 0.003 1
(CQ604970) Sequence 32728 from Patent WO0171042. 58 0.003 1
(CQ602865) Sequence 30623 from Patent WO0171042. 58 0.003 1
(CQ602864) Sequence 30622 from Patent WO0171042. 58 0.003 1
(CQ601629) Sequence 29387 from Patent WO0171042. 58 0.003 1
(CQ601628) Sequence 29386 from Patent WO0171042. 58 0.003 1
(CQ578745) Sequence 6503 from Patent WO0171042. 58 0.003 1
(CQ578744) Sequence 6502 from Patent WO0171042. 58 0.003 1
(CQ576714) Sequence 4472 from Patent WO0171042. 58 0.003 1
(CQ576713) Sequence 4471 from Patent WO0171042. 58 0.003 1
(CQ576624) Sequence 4382 from Patent WO0171042. 58 0.003 1
(CQ574212) Sequence 1970 from Patent WO0171042. 58 0.003 1
(CQ574211) Sequence 1969 from Patent WO0171042. 58 0.003 1
(BD313717) Antisense modulation of SRC-3 expression. 58 0.003 1
(BD277889) Meth1 and Meth2 Polynucleotides and Polypeptides. 58 0.003 1
(BD192354) AIB1, a steroid receptor co-activator. 58 0.003 1
(BD129589) Polynucleotides and polypeptides of METH1 and METH2. 58 0.003 1
(AX829434) Sequence 154 from Patent WO03072602. 58 0.003 1
(AX821998) Sequence 126 from Patent WO03068961. 58 0.003 1
(AX818404) Sequence 154 from Patent EP1338608. 58 0.003 1
(AX780090) Sequence 2247 from Patent WO03039443. 58 0.003 1
(AX780089) Sequence 2246 from Patent WO03039443. 58 0.003 1
(AX684856) Sequence 175 from Patent WO0224865. 58 0.003 1
(AX594610) Sequence 264 from Patent EP1258494. 58 0.003 1
(AX573200) Sequence 22 from Patent WO02059327. 58 0.003 1
(AX384818) Sequence 18 from Patent WO0210452. 58 0.003 1
(AX384806) Sequence 6 from Patent WO0210452. 58 0.003 1
(AX384805) Sequence 5 from Patent WO0210452. 58 0.003 1
(I34914) Sequence 1 from patent US 5599701. 58 0.003 1
(GN006538) Sequence 5733 from Patent EP2014675. 58 0.003 1
(GN002728) Sequence 1923 from Patent EP2014675. 58 0.003 1
(GN002724) Sequence 1919 from Patent EP2014675. 58 0.003 1
(GN002466) Sequence 1661 from Patent EP2014675. 58 0.003 1
(GC701478) Sequence 16723 from patent US 6812339. 58 0.003 1
(AR908661) Sequence 376 from patent US 7081340. 58 0.003 1
(AR778472) Sequence 333 from patent US 6949356. 58 0.003 1
(AR778417) Sequence 223 from patent US 6949356. 58 0.003 1
(AR545011) Sequence 142 from patent US 6747137. 58 0.003 1
(AR316837) Sequence 1 from patent US 6562589. 58 0.003 1
(EF106770) Asterinidae mixed genomic library microsatellite ... 58 0.003 1
(D49534) Drosophila melanogaster mRNA for cno, complete cds. 58 0.003 1
(DQ902587) Drosophila melanogaster calmodulin-binding transc... 58 0.003 1
(BT044454) Drosophila melanogaster IP06528 full insert cDNA. 58 0.003 1
(BT044227) Drosophila melanogaster FI05483 full insert cDNA. 58 0.003 1
(BT030453) Drosophila melanogaster IP18281 full insert cDNA. 58 0.003 1
(BT025212) Drosophila melanogaster FI01101 full insert cDNA. 58 0.003 1
(BT003468) Drosophila melanogaster RE73615 full insert cDNA. 58 0.003 1
(AY576613) Macrobdella decora microsatellite MfF06 sequence. 58 0.003 1
(AY113343) Drosophila melanogaster GH12701 full insert cDNA. 58 0.003 1
(AY060224) Drosophila melanogaster GH01388 full length cDNA. 58 0.003 1
(AY058547) Drosophila melanogaster LD24616 full length cDNA. 58 0.003 1
(AF145661) Drosophila melanogaster clone GH10646 BcDNA.GH106... 58 0.003 1
(AE014297) Drosophila melanogaster chromosome 3R, complete s... 58 0.003 1
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 58 0.003 1
(AC171105) Drosophila melanogaster clone CH223-40I08, comple... 58 0.003 1
(AC107326) Drosophila melanogaster X BAC RP98-33A8 (Roswell ... 58 0.003 1
(AC023729) Drosophila melanogaster X BAC RP98-39L4 (Roswell ... 58 0.003 1
(AC010064) Drosophila melanogaster 3L BAC RP98-22I16 (Roswel... 58 0.003 1
(AC008236) Drosophila melanogaster, chromosome 3R, region 95... 58 0.003 1
(AC008223) Drosophila melanogaster, chromosome 3R, region 95... 58 0.003 1
(AC008219) Drosophila melanogaster, chromosome 3R, region 10... 58 0.003 1
(AC007532) Drosophila melanogaster, chromosome 3R, region 82... 58 0.003 1
(AC007398) Drosophila melanogaster, chromosome 2R, region 47... 58 0.003 1
(AC007086) Drosophila melanogaster, chromosome 2R, region 45... 58 0.003 1
(EF488684) Homo sapiens nuclear receptor coactivator 3 (NCOA... 58 0.003 1
(BC122547) Homo sapiens nuclear receptor coactivator 3, mRNA... 58 0.003 1
(BC119001) Homo sapiens nuclear receptor coactivator 3, mRNA... 58 0.003 1
(BC092516) Homo sapiens nuclear receptor coactivator 3, mRNA... 58 0.003 1
(AL034418) Human DNA sequence from clone RP5-1049G16 on chro... 58 0.003 1
(AK302595) Homo sapiens cDNA FLJ53590 complete cds, highly s... 58 0.003 1
(AK296810) Homo sapiens cDNA FLJ51630 complete cds, highly s... 58 0.003 1
(AK289683) Homo sapiens cDNA FLJ77005 complete cds, highly s... 58 0.003 1
(AF036892) Homo sapiens nuclear receptor coactivator (ACTR) ... 58 0.003 1
(AF016031) Homo sapiens thyroid hormone receptor activator m... 58 0.003 1
(AF012108) Homo sapiens Amplified in Breast Cancer (AIB1) mR... 58 0.003 1
(AB209863) Homo sapiens mRNA for nuclear receptor coactivato... 58 0.003 1
(AC146345) Pan troglodytes clone rp43-1m12, WORKING DRAFT SE... 58 0.003 1
(AC142369) Rattus norvegicus clone CH230-507P19, WORKING DRA... 58 0.003 1
(AC142022) Rattus norvegicus clone CH230-278B5, WORKING DRAF... 58 0.003 1
(AC140161) Rattus norvegicus clone CH230-335K22, WORKING DRA... 58 0.003 1
(AC135865) Rattus norvegicus clone CH230-261I21, WORKING DRA... 58 0.003 1
(AC131530) Rattus norvegicus clone CH230-480P24, *** SEQUENC... 58 0.003 1
(AC128735) Drosophila melanogaster clone CH223-40I8, *** SEQ... 58 0.003 1
(AC128297) Rattus norvegicus clone CH230-397O9, *** SEQUENCI... 58 0.003 1
(AC121463) Rattus norvegicus clone CH230-33J4, WORKING DRAFT... 58 0.003 1
(AC120803) Rattus norvegicus clone CH230-252G22, WORKING DRA... 58 0.003 1
(AC120073) Rattus norvegicus clone CH230-357A23, WORKING DRA... 58 0.003 1
(AC117653) Mus musculus chromosome 12 clone RP23-298M21 map ... 58 0.003 1
(AC116076) Rattus norvegicus clone CH230-61L11, *** SEQUENCI... 58 0.003 1
(AC114454) Rattus norvegicus clone CH230-72B12, WORKING DRAF... 58 0.003 1
(AC111217) Rattus norvegicus clone CH230-62D9, WORKING DRAFT... 58 0.003 1
(AC103177) Rattus norvegicus clone CH230-99C22, *** SEQUENCI... 58 0.003 1
(AC099434) Rattus norvegicus clone CH230-120C9, WORKING DRAF... 58 0.003 1
(AC098393) Rattus norvegicus clone CH230-1O24, *** SEQUENCIN... 58 0.003 1
(CT025716) D.miranda DNA sequence *** SEQUENCING IN PROGRESS... 58 0.003 1
(AP007864) Lotus japonicus genomic DNA, chromosome 4, clone:... 58 0.003 1
(AC205686) Zea mays chromosome 1 clone CH201-297N5; ZMMBBc02... 58 0.003 1
(AC020176) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 58 0.003 1
(AC019929) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 58 0.003 1
(AC017812) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 58 0.003 1
(AC017786) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 58 0.003 1
(AC017618) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 58 0.003 1
(AC014950) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 58 0.003 1
(AC014779) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 58 0.003 1
(AC013954) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 58 0.003 1
(AC010567) Drosophila melanogaster clone RPCI98-11N6, *** SE... 58 0.003 1
(AC007352) Drosophila melanogaster strain y chromosome 2 clo... 58 0.003 1
(AZ929757) 479.dif88f08.s1 Saccharomyces kluyveri Lachancea ... 58 0.003 1
(AZ928563) 479.dif11c07.s1 Saccharomyces kluyveri Lachancea ... 58 0.003 1
(AZ449211) 1M0247A21F Mouse 10kb plasmid UUGC1M library Mus ... 58 0.003 1
(AZ250626) RPCI-23-93H6.TJ RPCI-23 Mus musculus genomic clon... 58 0.003 1
(AZ226620) RPCI-23-64N3.TJ RPCI-23 Mus musculus genomic clon... 58 0.003 1
(AQ935224) CpG2216B CpIOWAgDNA1 Cryptosporidium parvum genom... 58 0.003 1
(AQ873448) V66B1 mTn-3xHA/lacZ Insertion Library, strain AB9... 58 0.003 1
(AQ856545) nbeb0003L21r CUGI Rice BAC Library (EcoRI) Oryza ... 58 0.003 1
(AQ501932) V11E9 mTn-3xHA/lacZ Insertion Library Saccharomyc... 58 0.003 1
(FI429146) CH322-160N17.x CHORI-322 Drosophila melanogaster ... 58 0.003 1
(ET565852) fcg3x.229450j24 C. graminicola genomic sequence G... 58 0.003 1
(ET519842) fcg3x.220450c07.f C. graminicola genomic sequence... 58 0.003 1
(EK501197) 1095505214015 Global-Ocean-Sampling_GS-32-01-01-1... 58 0.003 1
(EJ775534) 1092995200750 Global-Ocean-Sampling_GS-30-02-01-1... 58 0.003 1
(EJ742035) 1092962025270 Global-Ocean-Sampling_GS-30-02-01-1... 58 0.003 1
(EI025946) bb76f06.r Dekkera bruxellensis Random Genomic Lib... 58 0.003 1
(EI016425) bb26f07.r Dekkera bruxellensis Random Genomic Lib... 58 0.003 1
(DX954687) CHORI105-1A11.TV CHORI105.pTARBAC1.3 Trypanosoma ... 58 0.003 1
(DX938292) CHORI105-25D15.TF CHORI105.pEpiFOS5 Trypanosoma c... 58 0.003 1
(DX797606) 3200151 VV10 Chlamydomonas reinhardtii genomic cl... 58 0.003 1
(DX789584) 2621547 VV07 Ustilago maydis genomic clone 115894... 58 0.003 1
(DX772484) 2621524 VV07 Ustilago maydis genomic clone 115894... 58 0.003 1
(DX764448) 2622738 VV07 Ustilago maydis genomic clone 116680... 58 0.003 1
(DX764008) 2621491 VV07 Ustilago maydis genomic clone 115908... 58 0.003 1
(DX752923) 2245683 VV03 Ustilago maydis genomic clone 884498... 58 0.003 1
(DX745448) 2408305 VV03 Ustilago maydis genomic clone 102533... 58 0.003 1
(DX740355) 2230058 VV03 Ustilago maydis genomic clone 877074... 58 0.003 1
(DX734485) 2408194 VV03 Ustilago maydis genomic clone 102454... 58 0.003 1
(DX730539) 2191625 VV03 Ustilago maydis genomic clone 892359... 58 0.003 1
(DX717784) 2530270 VV03 Ustilago maydis genomic clone 108454... 58 0.003 1
(DX714942) 2477326 VV03 Ustilago maydis genomic clone 104850... 58 0.003 1
(DX713190) 2437873 VV03 Ustilago maydis genomic clone 102996... 58 0.003 1
(DX712066) 2349266 VV03 Ustilago maydis genomic clone 102043... 58 0.003 1
(DX711132) 2307550 VV03 Ustilago maydis genomic clone 100625... 58 0.003 1
(DX703854) 2472404 VV03 Ustilago maydis genomic clone 106769... 58 0.003 1
(DX701354) 2351359 VV03 Ustilago maydis genomic clone 102210... 58 0.003 1
(DX699016) 2209093 VV03 Ustilago maydis genomic clone 907736... 58 0.003 1
(DX698977) 2194745 VV03 Ustilago maydis genomic clone 906042... 58 0.003 1
(DX690845) 2408649 VV03 Ustilago maydis genomic clone 102557... 58 0.003 1
(DX688844) 2291756 VV03 Ustilago maydis genomic clone 100064... 58 0.003 1
(DX684623) 2517515 VV03 Ustilago maydis genomic clone 108347... 58 0.003 1
(DX680341) 2436695 VV03 Ustilago maydis genomic clone 102621... 58 0.003 1
(DX678894) 2318561 VV03 Ustilago maydis genomic clone 100827... 58 0.003 1
(DX673943) 2287757 VV02 Ustilago maydis genomic clone 944581... 58 0.003 1
(DX665662) 2287763 VV02 Ustilago maydis genomic clone 944387... 58 0.003 1
(DX650273) 1941824 VV02 Ustilago maydis genomic clone 791480... 58 0.003 1
(DX650018) 1928966 VV02 Ustilago maydis genomic clone 790866... 58 0.003 1
(DX642928) 1957884 VV02 Ustilago maydis genomic clone 801467... 58 0.003 1
(DX640523) 2291349 VV02 Ustilago maydis genomic clone 940697... 58 0.003 1
(DX640175) 2299593 VV02 Ustilago maydis genomic clone 937341... 58 0.003 1
(DX638783) 2284275 VV02 Ustilago maydis genomic clone 930672... 58 0.003 1
(DX637306) 2027994 VV02 Ustilago maydis genomic clone 828848... 58 0.003 1
(DX636356) 2155756 VV02 Ustilago maydis genomic clone 812685... 58 0.003 1
(DX635778) 2085023 VV02 Ustilago maydis genomic clone 804676... 58 0.003 1
(DX632623) 2300272 VV02 Ustilago maydis genomic clone 944646... 58 0.003 1
(DX629685) 2084659 VV02 Ustilago maydis genomic clone 831494... 58 0.003 1
(DX623515) 2286517 VV02 Ustilago maydis genomic clone 940636... 58 0.003 1
(DX617857) 1957836 VV02 Ustilago maydis genomic clone 801535... 58 0.003 1
(DX616470) 1914677 VV02 Ustilago maydis genomic clone 785320... 58 0.003 1
(AL404908) T3 end of clone AU0AA001C09 of library AU0AA from... 58 0.003 1
(AL398932) T3 end of clone AS0AA012A12 of library AS0AA from... 58 0.003 1
(AL398033) T3 end of clone AS0AA006F03 of library AS0AA from... 58 0.003 1
(AL261735) Tetraodon nigroviridis genome survey sequence T7 ... 58 0.003 1
(AL166520) Tetraodon nigroviridis genome survey sequence T7 ... 58 0.003 1
(AL073651) Drosophila melanogaster genome survey sequence TE... 58 0.003 1
(DQ052181) Homo sapiens NCOA3 gene, VIRTUAL TRANSCRIPT, part... 58 0.003 1
(DQ050739) Pan troglodytes MN1 gene, VIRTUAL TRANSCRIPT, par... 58 0.003 1
(DH735049) Rattus norvegicus DNA, BAC clone: RNB1-307E04, 3'... 58 0.003 1
(DH506983) Monosiga ovata DNA, fosmid clone: MOF-079B13, gen... 58 0.003 1
(DH468764) Monosiga ovata DNA, fosmid clone: MOF-012L07, gen... 58 0.003 1
(CT560640) A BAC library has been constructed from cultivar ... 58 0.003 1
(CL963293) OsIFCC009178 Oryza sativa Express Library Oryza s... 58 0.003 1
(CL852107) OR_CBa0080O01.f OR_CBa Oryza rufipogon genomic cl... 58 0.003 1
(AG958522) Drosophila sechellia DNA, clone: DSE1-015F18.F.fa... 58 0.003 1
(AG483273) Mus musculus molossinus DNA, clone:MSMg01-378G18.... 58 0.003 1
(CL808898) OR_CBa0023H24.f OR_CBa Oryza rufipogon genomic cl... 58 0.003 1
(AG434020) Mus musculus molossinus DNA, clone:MSMg01-311I19.... 58 0.003 1
(AG275725) Cyanidioschyzon merolae genomic DNA, reverse end ... 58 0.003 1
(AG271908) Cyanidioschyzon merolae genomic DNA, forward end ... 58 0.003 1
(AG270370) Cyanidioschyzon merolae genomic DNA, forward end ... 58 0.003 1
(AG214857) Oryza sativa Japonica Group DNA, clone:T16849T, 3... 58 0.003 1
(EH385941) 905 E. acervulina cDNA from second generation mer... 58 0.003 1
(EH385350) 766 E. acervulina cDNA from second generation mer... 58 0.003 1
(EH018573) HCM_28_E01 Haploid cells grown in Complete Media ... 58 0.003 1
(EE730362) MPB043.C21_M15 MPB04 Grosmannia clavigera cDNA cl... 58 0.003 1
(EE727397) MPB023.C21_G11 MPB02 Grosmannia clavigera cDNA cl... 58 0.003 1
(EE726187) MPB024.C21_N07 MPB02 Grosmannia clavigera cDNA cl... 58 0.003 1
(EC947238) WIN0541.C21_B02 Cab Sauv flower, leaf and root no... 58 0.003 1
(EC935885) WIN0510.C21_L10 Cab Sauv flower, leaf and root no... 58 0.003 1
(EC816885) SEE00001672 Seculamonas ecuadoriensis Company (ST... 58 0.003 1
(EC815788) SEE00002647 Seculamonas ecuadoriensis Company (ST... 58 0.003 1
(EC806922) SAE00007503 ir_esapbrog Sphaeroforma arctica cDNA... 58 0.003 1
(EB741126) AcOu04601B06.g ORESTES cDNA library, Eimeria acer... 58 0.003 1
(EB741120) AcOu02101E01.g ORESTES cDNA library, Eimeria acer... 58 0.003 1
(EB629479) AGENCOURT_54972284 D. mojavensis EST Drosophila m... 58 0.003 1
(EB620969) AGENCOURT_57301788 D. grimshawi EST Drosophila gr... 58 0.003 1
(EB600699) AGENCOURT_54975555 D. mojavensis EST Drosophila m... 58 0.003 1
(EB589525) AGENCOURT_51773390 D. ananassae EST Drosophila an... 58 0.003 1
(EB496339) 1099435201250 12-DrosW-norm-1P5Kb Drosophila will... 58 0.003 1
(EB455771) 1099341376194 12-DrosW-std-1P6Kb Drosophila willi... 58 0.003 1
(EB055022) StheSEQ14561 Sporotrichum thermophile pBluescript... 58 0.003 1
(DT761078) EST1194927 Aquilegia cDNA library Aquilegia formo... 58 0.003 1
(DR546772) WS0313.B21_P10 WS-MC-A-17 Picea glauca cDNA clone... 58 0.003 1
(DN886253) naf35d12.y1 Rabbit eye cornea. Unnormalized (naf)... 58 0.003 1
(DN886252) naf35d12.x1 Rabbit eye cornea. Unnormalized (naf)... 58 0.003 1
(DN881834) naf03d07.y1 Rabbit eye cornea. Unnormalized (naf)... 58 0.003 1
(DN881833) naf03d07.x1 Rabbit eye cornea. Unnormalized (naf)... 58 0.003 1
(DN701323) CLJ35-A05.y1d-s SHGC-CLJ Gasterosteus aculeatus c... 58 0.003 1
(DN558019) Ls_af1_30b08_T7 Litomosoides sigmodontis adult fe... 58 0.003 1
(DK953145) Adiantum capillus-veneris mRNA, clone: TST39A01NG... 58 0.003 1
(DC594094) Lotus japonicus mRNA, clone: GENr053f02, 5' end s... 58 0.003 1
(DC346426) Homo sapiens cDNA, clone CTONG2015222, 5' end, mR... 58 0.003 1
(AU138524) Homo sapiens cDNA clone:PLACE1008742, 5' end, exp... 58 0.003 1
(AU078707) Oryza sativa Japonica Group cDNA, partial sequenc... 58 0.003 1
(AU030746) Oryza sativa Japonica Group cDNA, partial sequenc... 58 0.003 1
(AM727132) Cucumis melo subsp. agrestis EST, clone A_10-C09-... 58 0.003 1
(CV599526) mdu59g08.g2 Hc7B_M Ajellomyces capsulatus cDNA 5'... 58 0.003 1
(CU897974) Podospora anserina mRNA sequence from clone HH0AB... 58 0.003 1
(CU874942) Podospora anserina mRNA sequence from clone HH0AB... 58 0.003 1
(CU566590) Theobroma cacao, mRNA sequence (KZ0ABL4YP02FM1). 58 0.003 1
(CU566528) Theobroma cacao, mRNA sequence (KZ0ABL4YK13FM1). 58 0.003 1
(CU566504) Theobroma cacao, mRNA sequence (KZ0ABL4YJ01FM1). 58 0.003 1
(CU566478) Theobroma cacao, mRNA sequence (KZ0ABL4YH05FM1). 58 0.003 1
(CU566459) Theobroma cacao, mRNA sequence (KZ0ABL4YF20FM1). 58 0.003 1
(CU566398) Theobroma cacao, mRNA sequence (KZ0ABL4YB01FM1). 58 0.003 1
(CU566383) Theobroma cacao, mRNA sequence (KZ0ABL3YP13FM1). 58 0.003 1
(CU566360) Theobroma cacao, mRNA sequence (KZ0ABL3YN15FM1). 58 0.003 1
(CU566306) Theobroma cacao, mRNA sequence (KZ0ABL3YJ24FM1). 58 0.003 1
(CU566239) Theobroma cacao, mRNA sequence (KZ0ABL3YF09FM1). 58 0.003 1
(CU566234) Theobroma cacao, mRNA sequence (KZ0ABL3YE21FM1). 58 0.003 1
(CU566219) Theobroma cacao, mRNA sequence (KZ0ABL3YD23FM1). 58 0.003 1
(CU566207) Theobroma cacao, mRNA sequence (KZ0ABL3YD02FM1). 58 0.003 1
(CU566170) Theobroma cacao, mRNA sequence (KZ0ABL3YA11FM1). 58 0.003 1
(CU566078) Theobroma cacao, mRNA sequence (KZ0ABL2YJ04FM1). 58 0.003 1
(CU566043) Theobroma cacao, mRNA sequence (KZ0ABL2YG10FM1). 58 0.003 1
(CU566039) Theobroma cacao, mRNA sequence (KZ0ABL2YG03FM1). 58 0.003 1
(CU566031) Theobroma cacao, mRNA sequence (KZ0ABL2YF16FM1). 58 0.003 1
(CU565923) Theobroma cacao, mRNA sequence (KZ0ABL1YO13FM1). 58 0.003 1
(CU565872) Theobroma cacao, mRNA sequence (KZ0ABL1YK04FM1). 58 0.003 1
(CU565863) Theobroma cacao, mRNA sequence (KZ0ABL1YJ08FM1). 58 0.003 1
(CU565797) Theobroma cacao, mRNA sequence (KZ0ABL1YC17FM1). 58 0.003 1
(CU565782) Theobroma cacao, mRNA sequence (KZ0ABL1YB10FM1). 58 0.003 1
(CU565466) Theobroma cacao, mRNA sequence (KZ0ABL4YI07FM1). 58 0.003 1
(CU565275) Theobroma cacao, mRNA sequence (KZ0ABL1YK09FM1). 58 0.003 1
(CU565225) Theobroma cacao, mRNA sequence (KZ0ABL1YA21FM1). 58 0.003 1
(CU542437) Theobroma cacao, mRNA sequence (KZ0AAV9YC03FM1). 58 0.003 1
(CU537191) Theobroma cacao, mRNA sequence (KZ0AAQ6YB14FM1). 58 0.003 1
(CU531022) Theobroma cacao, mRNA sequence (KZ0AAK12YJ21FM1). 58 0.003 1
(AM112952) Trichoderma reesei EST, fragment 01660. 58 0.003 1
(AM112484) Trichoderma reesei EST, fragment 01192. 58 0.003 1
(AM111769) Trichoderma reesei EST, fragment 00397. 58 0.003 1
(AM111465) Trichoderma reesei EST, fragment 00093. 58 0.003 1
(CO231053) WS00113.B21_M20 WS-ES-A-1 Picea glauca cDNA clone... 58 0.003 1
(CN278411) 17000600233589 GRN_PRENEU Homo sapiens cDNA 5', m... 58 0.003 1
(CN214727) 28461 Suspension culture Solanum tuberosum cDNA, ... 58 0.003 1
(CK824636) ig30e12.x5 HR85 islet Homo sapiens cDNA clone IMA... 58 0.003 1
(CK436199) GQ0042.BR_F04 GQ004: Non-lignified secondary xyle... 58 0.003 1
(CK276626) EST722704 potato abiotic stress cDNA library Sola... 58 0.003 1
(CI257061) Oryza sativa Japonica Group cDNA, clone: 045-M015... 58 0.003 1
(CI249455) Oryza sativa Japonica Group cDNA, clone: 043-M078... 58 0.003 1
(CI224546) Oryza sativa Japonica Group cDNA, clone: 040-M040... 58 0.003 1
(CI152331) Oryza sativa Japonica Group cDNA, clone: 029-M051... 58 0.003 1
(CI142463) Oryza sativa Japonica Group cDNA, clone: 028-M028... 58 0.003 1
(CI133172) Oryza sativa Japonica Group cDNA, clone: 026-M068... 58 0.003 1
(CI130673) Oryza sativa Japonica Group cDNA, clone: 026-M027... 58 0.003 1
(AJ703526) Zantedeschia aethiopica EST, clone G-23-8. 58 0.003 1
(CF882989) tric032xa23.b11 T.reesei mycelial culture, Versio... 58 0.003 1
(CF872843) tric032xa23.b1 T.reesei mycelial culture, Version... 58 0.003 1
(CF869757) tric020xf11.b1 T.reesei mycelial culture, Version... 58 0.003 1
(CF867854) tric012xm19.b1 T.reesei mycelial culture, Version... 58 0.003 1
(CF645377) K35_G02 Filamentous Forced Diploid Ustilago maydi... 58 0.003 1
(CF604446) BACCA01_001816 Grape Berry pSPORT1 Library Vitis ... 58 0.003 1
(CF602812) BACCA01_000023 Grape Berry pSPORT1 Library Vitis ... 58 0.003 1
(CB902869) tric032xa23 T.reesei mycelial culture, Version 3 ... 58 0.003 1
(CB899903) tric020xf11 T.reesei mycelial culture, Version 3 ... 58 0.003 1
(CB897902) tric012xm19 T.reesei mycelial culture, Version 3 ... 58 0.003 1
(CB007338) VVC044C02_141732 An expressed sequence tag databa... 58 0.003 1
(CA195909) SCEZAD1082C12.g AD1 Saccharum officinarum cDNA cl... 58 0.003 1
(CA074392) SCEZAM1080G07.g AM1 Saccharum officinarum cDNA cl... 58 0.003 1

>(BJ355032) Dictyostelium discoideum cDNA clone:dda55d18, 3' end,
single read.
Length = 755

Score = 1386 bits (699), Expect(3) = 0.0
Identities = 702/703 (99%)
Strand = Plus / Minus


Query: 989 cttccaaatgcaacagaggcaggtgaatattctgcagagtttttcggacttttcaatagt 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 cttccaaatgcaacagaggcaggtgaatattctgcagagtttttcggacttttcaatagt 696


Query: 1049 tttatctcaacctctcaagatcgtaagatttatttagctgtaaaaggtttcattccattc 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tttatctcaacctctcaagatcgtaagatttatttagctgtaaaaggtttcattccattc 636


Query: 1109 atttgtgatgctatcatcaaggagattgaacatatcaaatcaaaggaaggttcatttagt 1168
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 635 atttgtgatgctatcatcaaggagattgagcatatcaaatcaaaggaaggttcatttagt 576


Query: 1169 actgatgtttcacaaggttttgttttgaaaactttagttgctatacttaaatcattcctc 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 actgatgtttcacaaggttttgttttgaaaactttagttgctatacttaaatcattcctc 516


Query: 1229 gatgtaccaactcttaaagcaaagatgaagaaagataatatgttagaaaaggtattggat 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gatgtaccaactcttaaagcaaagatgaagaaagataatatgttagaaaaggtattggat 456


Query: 1289 gctttcttatcacttcgtggtgttatcgttcaaaagaataagttaaccgaggattctgta 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gctttcttatcacttcgtggtgttatcgttcaaaagaataagttaaccgaggattctgta 396


Query: 1349 cgttatctccaagagttgatgaaatcactaaacaatgaatctgttcaagacaataagaag 1408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cgttatctccaagagttgatgaaatcactaaacaatgaatctgttcaagacaataagaag 336


Query: 1409 tttatggctgctaatattaaagcattggctaaatatcaatcggatggtagaactccaata 1468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tttatggctgctaatattaaagcattggctaaatatcaatcggatggtagaactccaata 276


Query: 1469 tttattttcgaacaactttgtaatattgtttgtccaaccaaaccagatccaatctatcaa 1528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tttattttcgaacaactttgtaatattgtttgtccaaccaaaccagatccaatctatcaa 216


Query: 1529 ttgatactctttaaagctgcatctcaagaggaatacattagaggttcaatgaatcgtaac 1588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ttgatactctttaaagctgcatctcaagaggaatacattagaggttcaatgaatcgtaac 156


Query: 1589 ccatatacttccaatacctttggtggtccactcatgagagatgtaaagaataagatttgt 1648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ccatatacttccaatacctttggtggtccactcatgagagatgtaaagaataagatttgt 96


Query: 1649 aaagctttagatttaggtagtttcttagatgatgataatggta 1691
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 aaagctttagatttaggtagtttcttagatgatgataatggta 53

Score = 63.9 bits (32), Expect(3) = 0.0
Identities = 32/32 (100%)
Strand = Plus / Minus


Query: 1693 ggagttattagtcgataataagatcattaaat 1724
||||||||||||||||||||||||||||||||
Sbjct: 52 ggagttattagtcgataataagatcattaaat 21

Score = 42.1 bits (21), Expect(3) = 0.0
Identities = 21/21 (100%)
Strand = Plus / Minus


Query: 1725 tggatttaccaattaaaaaag 1745
|||||||||||||||||||||
Sbjct: 21 tggatttaccaattaaaaaag 1

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 5,715,742,581
Number of extensions: 343898230
Number of successful extensions: 29320132
Number of sequences better than 10.0: 5403
Length of query: 4748
Length of database: 101,790,757,118
Length adjustment: 25
Effective length of query: 4723
Effective length of database: 99,238,119,368
Effective search space: 468701637775064
Effective search space used: 468701637775064
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.28
Homology vs Protein
Query= Contig-U16421-1 (Contig-U16421-1Q) /CSM_Contig/Contig-U16421-1Q.Seq.d
(4748 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54QG5) RecName: Full=Probable E3 ubiquitin-protein ligase DDB_... 1116 0.0
DQ415922_13(DQ415922|pid:none) Cleome spinosa clone BAC Cs1, com... 346 e-162
AF348492_1(AF348492|pid:none) Homo sapiens p600 mRNA, complete c... 290 e-149
AB007931_1(AB007931|pid:none) Homo sapiens mRNA for KIAA0462 pro... 290 e-149
(Q2TL32) RecName: Full=E3 ubiquitin-protein ligase UBR4; ... 286 e-147
AY850927_1(AY850927|pid:none) Rattus norvegicus ZUBR1 mRNA, comp... 286 e-147
(Q80Y11) RecName: Full=E3 ubiquitin-protein ligase UBR4; ... 284 e-147
BC057625_1(BC057625|pid:none) Mus musculus ubiquitin protein lig... 284 e-147
BC040468_1(BC040468|pid:none) Mus musculus ubiquitin protein lig... 284 e-147
BC059890_1(BC059890|pid:none) Mus musculus ubiquitin protein lig... 265 e-127
AL137127_2(AL137127|pid:none) Human DNA sequence from clone RP5-... 264 e-126
AK302623_1(AK302623|pid:none) Homo sapiens cDNA FLJ53484 complet... 264 e-112
BC094329_1(BC094329|pid:none) Mus musculus ubiquitin protein lig... 265 e-106
BC096758_1(BC096758|pid:none) Homo sapiens ubiquitin protein lig... 264 e-104
AC151523_5(AC151523|pid:none) Medicago truncatula chromosome 7 c... 357 2e-96
BC051096_1(BC051096|pid:none) Mus musculus ubiquitin protein lig... 265 2e-68
AK082231_1(AK082231|pid:none) Mus musculus 0 day neonate cerebel... 265 2e-68
AL807833_5(AL807833|pid:none) Mouse DNA sequence from clone RP23... 218 1e-54
AK044277_1(AK044277|pid:none) Mus musculus adult retina cDNA, RI... 218 1e-54
AL049972_1(AL049972|pid:none) Homo sapiens mRNA; cDNA DKFZp564B1... 205 1e-50
AF055010_1(AF055010|pid:none) Homo sapiens clone 24561 unknown m... 199 6e-49
CR954203_339(CR954203|pid:none) Ostreococcus tauri strain OTTH05... 172 8e-41
CP000583_337(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 172 1e-40
D87757(D87757)protein C44E4.1a [imported] - Caenorhabditis elegans 152 1e-34
AF003140_4(AF003140|pid:none) Caenorhabditis elegans cosmid C44E... 148 2e-33
BC063573_1(BC063573|pid:none) Homo sapiens ubiquitin protein lig... 147 3e-33
BC007962_1(BC007962|pid:none) Homo sapiens ubiquitin protein lig... 143 7e-32
BC091421_1(BC091421|pid:none) Rattus norvegicus ZUBR1, mRNA (cDN... 138 2e-30
E87757(E87757)protein C44E4.1b [imported] - Caenorhabditis elegans 132 1e-28
AF003140_5(AF003140|pid:none) Caenorhabditis elegans cosmid C44E... 128 2e-27
AY812441_1(AY812441|pid:none) Schistosoma japonicum SJCHGC04356 ... 70 6e-10
AF163007_1(AF163007|pid:none) Rickettsia sp. A-167 protein PS 12... 39 2.4
DQ097084_1(DQ097084|pid:none) Rickettsia mongolotimonae isolate ... 38 3.2
AF155058_1(AF155058|pid:none) Israeli tick typhus rickettsia pro... 38 3.2
CP000698_3052(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 38 3.2
AF163001_1(AF163001|pid:none) Rickettsia sp. S protein PS 120 (D... 38 4.2
AF163005_1(AF163005|pid:none) Rickettsia conorii strain ATCC VR-... 37 9.3
(Q52658) RecName: Full=Antigenic heat-stable 120 kDa protein; Al... 37 9.3
EF219462_1(EF219462|pid:none) Rickettsia sp. IG-1 PS120 (D) gene... 37 9.3
AF163008_1(AF163008|pid:none) Rickettsia conorii strain ATCC VR-... 37 9.3

>(Q54QG5) RecName: Full=Probable E3 ubiquitin-protein ligase
DDB_G0283893; EC=6.3.2.-;
Length = 5875

Score = 1116 bits (2887), Expect = 0.0
Identities = 600/732 (81%), Positives = 600/732 (81%)
Frame = +2

Query: 2 ILPCLKIIIYLCTLDRKGAFITKDAKDLEISQKLLATRFEKLKSSKKQXXXXXXXXXXXX 181
ILPCLKIIIYLCTLDRKGAFITKDAKDLEISQKLLATRFEKLKSSKKQ
Sbjct: 4479 ILPCLKIIIYLCTLDRKGAFITKDAKDLEISQKLLATRFEKLKSSKKQAIALAATATATA 4538

Query: 182 XXXXXXXXXXXEKKIEALSSLLSPNTVNNIALSVASSLLSPXXXXXXXXXXXXXXXXXXX 361
EKKIEALSSLLSPNTVNNIALSVASSLLSP
Sbjct: 4539 TAANASLTSTIEKKIEALSSLLSPNTVNNIALSVASSLLSPQQMQLQIQQQIALQQQQIQ 4598

Query: 362 XXXXXXXXXXNESVSGLKILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 541
NESVSGLKIL
Sbjct: 4599 QQIQQQQQQLNESVSGLKILSPSSSSSSPSGVGATGSENGGGGSGSSSGSSVSGSGSISS 4658

Query: 542 XQDPNILSIFDNDTSNAGANESWDGDDNPIANAWSSKYENYLSNFNVNSSIGEISKSLKP 721
QDPNILSIFDNDTSNAGANESWDGDDNPIANAWSSKYENYLSNFNVNSSIGEISKSLKP
Sbjct: 4659 SQDPNILSIFDNDTSNAGANESWDGDDNPIANAWSSKYENYLSNFNVNSSIGEISKSLKP 4718

Query: 722 LSQDELKSKYFKRWYAXXXXXXXXXXXXSSGIGYATQSSXXXXXXXXXXXXXXXNSTSSI 901
LSQDELKSKYFKRWYA SSGIGYATQSS NSTSSI
Sbjct: 4719 LSQDELKSKYFKRWYAQVKKRKQQQQQQSSGIGYATQSSFEVLFEEKWLEKLLFNSTSSI 4778

Query: 902 RLEIITLMGILSKNSNSRSLKFLDLLTKILPNATEAGEYSAEFFGLFNSFISTSQDRKIY 1081
RLEIITLMGILSKNSNSRSLKFLDLLTKILPNATEAGEYSAEFFGLFNSFISTSQDRKIY
Sbjct: 4779 RLEIITLMGILSKNSNSRSLKFLDLLTKILPNATEAGEYSAEFFGLFNSFISTSQDRKIY 4838

Query: 1082 LAVKGFIPFICDAXXXXXXXXXXXXGSFSTDVSQGFVLKTLVAILKSFLDVPTLKAKMKK 1261
LAVKGFIPFICDA GSFSTDVSQGFVLKTLVAILKSFLDVPTLKAKMKK
Sbjct: 4839 LAVKGFIPFICDAIIKEIEHIKSKEGSFSTDVSQGFVLKTLVAILKSFLDVPTLKAKMKK 4898

Query: 1262 DNMLEKVLDAFLSLRGVIVQKNKLTEDSVRYLQELMKSLNNESVQDNKKFMAANIKALAK 1441
DNMLEKVLDAFLSLRGVIVQKNKLTEDSVRYLQELMKSLNNESVQDNKKFMAANIKALAK
Sbjct: 4899 DNMLEKVLDAFLSLRGVIVQKNKLTEDSVRYLQELMKSLNNESVQDNKKFMAANIKALAK 4958

Query: 1442 YQSDGRTPIFIFEQLCNIVCPTKPDPIYQLILFKAASQEEYIRGSMNRNPYTSNTFGGPL 1621
YQSDGRTPIFIFEQLCNIVCPTKPDPIYQLILFKAASQEEYIRGSMNRNPYTSNTFGGPL
Sbjct: 4959 YQSDGRTPIFIFEQLCNIVCPTKPDPIYQLILFKAASQEEYIRGSMNRNPYTSNTFGGPL 5018

Query: 1622 MRDVKNKICKALDLGSFLDDDNGMELLVDNKIIKLDLPIKKVYELVWKKSPQALRTADIN 1801
MRDVKNKICKALDLGSFLDDDNGMELLVDNKIIKLDLPIKKVYELVWKKSPQALRTADIN
Sbjct: 5019 MRDVKNKICKALDLGSFLDDDNGMELLVDNKIIKLDLPIKKVYELVWKKSPQALRTADIN 5078

Query: 1802 IPMNVVYRLQGLDGEATEEIIETLNDNNSEEKDPEVEYEITSVMAECGGLESMISMIERI 1981
IPMNVVYRLQGLDGEATEEIIETLNDNNSEEKDPEVEYEITSVMAECGGLESMISMIERI
Sbjct: 5079 IPMNVVYRLQGLDGEATEEIIETLNDNNSEEKDPEVEYEITSVMAECGGLESMISMIERI 5138

Query: 1982 NDFSIEKELAQLVIKLLYHCCKIKINRQKLLTLNTVGRLLEKLKQAFHQPELSEHLLVII 2161
NDFSIEKELAQLVIKLLYHCCKIKINRQKLLTLNTVGRLLEKLKQAFHQPELSEHLLVII
Sbjct: 5139 NDFSIEKELAQLVIKLLYHCCKIKINRQKLLTLNTVGRLLEKLKQAFHQPELSEHLLVII 5198

Query: 2162 ESVVSEANRDYL 2197
ESVVSEANRDYL
Sbjct: 5199 ESVVSEANRDYL 5210

Score = 902 bits (2330), Expect = 0.0
Identities = 454/499 (90%), Positives = 456/499 (91%)
Frame = +3

Query: 2199 RGSNSSTSLSHHKDINEAQEQMNMFLDKLNGAQVMSNPKIIQAITRIIPFLTYGHTEIMD 2378
RGSNSSTSLSHHKDINEAQEQMNMFLDKLNGAQVMSNPKIIQAITRIIPFLTYGHTEIMD
Sbjct: 5211 RGSNSSTSLSHHKDINEAQEQMNMFLDKLNGAQVMSNPKIIQAITRIIPFLTYGHTEIMD 5270

Query: 2379 YLVDFFTPYLNFQEFDDSKSKDTNHVYHLDFFTKLMENTRPDSNXXXXXXXXXXXXXXXX 2558
YLVDFFTPYLNFQEFDDSKSKDTNHVYHLDFFTKLMENTRPDSN
Sbjct: 5271 YLVDFFTPYLNFQEFDDSKSKDTNHVYHLDFFTKLMENTRPDSNGRSIRSIIIKRGITKS 5330

Query: 2559 LVDYLLNYFPENGDKTSQEWLSSLEKPALPFVLVLLKGLAMGHEPTQNMTLESNLIKRIH 2738
LVDYLLNYFPENGDKTSQEWLSSLEKPALPFVLVLLKGLAMGHEPTQNMTLESNLIKRIH
Sbjct: 5331 LVDYLLNYFPENGDKTSQEWLSSLEKPALPFVLVLLKGLAMGHEPTQNMTLESNLIKRIH 5390

Query: 2739 ILEETAGTSAKIGSLAENLLESIAEGNEKTSKIVSDTRKESKMEKLSHAQKHREDVLKQL 2918
ILEETAGTSAKIGSLAENLLESIAEGNEKTSKIVSDTRKESKMEKLSHAQKHREDVLKQL
Sbjct: 5391 ILEETAGTSAKIGSLAENLLESIAEGNEKTSKIVSDTRKESKMEKLSHAQKHREDVLKQL 5450

Query: 2919 GLAQQGKHIMANVVPGSIEDLDDDEGFTCMVCREGYSFKPTDVLGIYTFSKRIPLTSVGE 3098
GLAQQGKHIMANVVPGSIEDLDDDEGFTCMVCREGYSFKPTDVLGIYTFSKRIPLTSVGE
Sbjct: 5451 GLAQQGKHIMANVVPGSIEDLDDDEGFTCMVCREGYSFKPTDVLGIYTFSKRIPLTSVGE 5510

Query: 3099 TTCPPSSTTNVXXXXXXXXXXXXXXXXXXXYYGFTTVTHFNFIHFNCHRDATKADRSMKV 3278
TTCPPSSTTNV YYGFTTVTHFNFIHFNCHRDATKADRSMKV
Sbjct: 5511 TTCPPSSTTNVAASLSLSPSSSGGGGGGALYYGFTTVTHFNFIHFNCHRDATKADRSMKV 5570

Query: 3279 PKEEWEGAALRNQQTKCNGLFPVLPPKMNSDAFTPYSDKFWVNLNNISRVEGPKFRILSH 3458
PKEEWEGAALRNQQTKCNGLFPVLPPKMNSDAFTPYSDKFWVNLNNISRVEGPKFRILSH
Sbjct: 5571 PKEEWEGAALRNQQTKCNGLFPVLPPKMNSDAFTPYSDKFWVNLNNISRVEGPKFRILSH 5630

Query: 3459 DLKFLLIRLAKDESFSTDSKGGGKESNIRIAPMVGQLGMVLLDQKVGGGNSANQLRRSQF 3638
DLKFLLIRLAKDESFSTDSKGGGKESNIRIAPM QLGM LLDQK+ GGNSANQLRR QF
Sbjct: 5631 DLKFLLIRLAKDESFSTDSKGGGKESNIRIAPMFVQLGMFLLDQKLVGGNSANQLRRPQF 5690

Query: 3639 EKTLAQFTTLPMETGINIM 3695
EKTLAQFTTLP+ET I M
Sbjct: 5691 EKTLAQFTTLPLETAITSM 5709

Score = 335 bits (859), Expect(3) = e-167
Identities = 168/168 (100%), Positives = 168/168 (100%)
Frame = +3

Query: 3939 KFRILSHDLKFLLIRLAKDESFSTDSKGGGKESNIRIAPMFVQLGMFLLDQKLVGGNSAN 4118
KFRILSHDLKFLLIRLAKDESFSTDSKGGGKESNIRIAPMFVQLGMFLLDQKLVGGNSAN
Sbjct: 5624 KFRILSHDLKFLLIRLAKDESFSTDSKGGGKESNIRIAPMFVQLGMFLLDQKLVGGNSAN 5683

Query: 4119 QLRRPQFEKTLAQFTTLPLETAITSMYQMLSDNVPYFLVVSIFLHSPKEFENQKFNYLTK 4298
QLRRPQFEKTLAQFTTLPLETAITSMYQMLSDNVPYFLVVSIFLHSPKEFENQKFNYLTK
Sbjct: 5684 QLRRPQFEKTLAQFTTLPLETAITSMYQMLSDNVPYFLVVSIFLHSPKEFENQKFNYLTK 5743

Query: 4299 LLAYAFVDYLTTNTKNGLSSPDEPSKDKLFDITRPWLIFFSLLSKFHS 4442
LLAYAFVDYLTTNTKNGLSSPDEPSKDKLFDITRPWLIFFSLLSKFHS
Sbjct: 5744 LLAYAFVDYLTTNTKNGLSSPDEPSKDKLFDITRPWLIFFSLLSKFHS 5791

Score = 185 bits (470), Expect(3) = e-167
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +2

Query: 3689 YYGFTTVTHFNFIHFNCHRDATKADRSMKVPKEEWEGAALRNQQTKCNGLFPVLPPKMNS 3868
YYGFTTVTHFNFIHFNCHRDATKADRSMKVPKEEWEGAALRNQQTKCNGLFPVLPPKMNS
Sbjct: 5541 YYGFTTVTHFNFIHFNCHRDATKADRSMKVPKEEWEGAALRNQQTKCNGLFPVLPPKMNS 5600

Query: 3869 DAFTPYSDKFWVNLNNISRVEGPK 3940
DAFTPYSDKFWVNLNNISRVEGPK
Sbjct: 5601 DAFTPYSDKFWVNLNNISRVEGPK 5624

Score = 118 bits (295), Expect(3) = e-167
Identities = 58/70 (82%), Positives = 58/70 (82%)
Frame = +1

Query: 4444 IIKPSSCTEENWIQETKNHLSTNCTKIQVDVKELLNCFENELKXXXXXXXXXXXXGLLKN 4623
IIKPSSCTEENWIQETKNHLSTNCTKIQVDVKELLNCFENELK GLLKN
Sbjct: 5792 IIKPSSCTEENWIQETKNHLSTNCTKIQVDVKELLNCFENELKEFQDEMEFFDDEGLLKN 5851

Query: 4624 VLLNNKDSNE 4653
VLLNNKDSNE
Sbjct: 5852 VLLNNKDSNE 5861

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 7,161,931,198
Number of extensions: 138700641
Number of successful extensions: 340195
Number of sequences better than 10.0: 40
Number of HSP's gapped: 339712
Number of HSP's successfully gapped: 147
Length of query: 1582
Length of database: 1,061,185,681
Length adjustment: 142
Effective length of query: 1440
Effective length of database: 597,066,065
Effective search space: 859775133600
Effective search space used: 859775133600
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.93 gvh: 0.51 alm: 0.31 top: 0.37 tms: 0.07 mit: 0.23 mip: 0.00
nuc: 0.04 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.33 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.07 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 1.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

24.0 %: nuclear
24.0 %: endoplasmic reticulum
16.0 %: cytoplasmic
12.0 %: mitochondrial
8.0 %: Golgi
4.0 %: vacuolar
4.0 %: plasma membrane
4.0 %: vesicles of secretory system
4.0 %: extracellular, including cell wall

>> prediction for Contig-U16421-1 is nuc

VS (DIR, S) 0
VH (FL, L) 4
VF (FL, S) 0
AH (FL, L) 17
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 6
SF (FL, S) 0
CH (FL, L) 3
CF (FL, S) 2
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0