| Contig-U16394-1 |
| Contig ID |
Contig-U16394-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
2914 |
| Chromosome number (1..6, M) |
- |
| Chromosome length |
- |
| Start point |
- |
| End point |
- |
| Strand (PLUS/MINUS) |
- |
| Number of clones |
179 |
| Number of EST |
193 |
| Link to clone list |
U16394 |
| List of clone(s) |
est1=SSG691E,-186,702
est2=SSL503E,-50,782
est3=SSJ278E,-40,401
est4=SSK172E,-30,638
est5=SSF259E,-29,519
est6=SSG887Z,-16,205
est7=SLK607E,1,1030
est8=SSH604F,19,365
est9=SSC455F,20,722
est10=SSA301F,37,548
est11=SSA418F,44,315
est12=SLJ252Z,92,372
est13=SSH383E,92,961
est14=SSH526F,253,579
est15=SLA166F,372,900
est16=SSE207E,403,1476
est17=SFK394F,460,1126
est18=SSK331Z,468,1006
est19=SSD740Z,493,1006
est20=SSG152F,519,1054
est21=SSA732Z,536,953
est22=SFJ451F,544,959
est23=SHG608F,549,1165
est24=SHB527F,554,998
est25=SSM406F,555,996
est26=SHC342Z,568,1254
est27=SHJ574Z,570,1141
est28=SSL671F,585,1060
est29=SSM670E,592,1389
est30=SSC359E,598,1181
est31=SFJ486Z,604,1259
est32=SSG541F,605,1209
est33=CHI183F,617,1186
est34=SSM279F,635,925
est35=SSK567F,643,1248
est36=SSH195E,645,1024
est37=SSH332E,645,1017
est38=SFD878F,648,1039
est39=SFD878Z,648,1025
est40=SHC296F,649,1097
est41=SSF670E,652,1053
est42=SSG601E,652,1052
est43=SSF116E,677,1083
est44=SSC358E,679,1061
est45=VHC858E,684,1800
est46=SSF883E,692,1410
est47=SSK690F,692,1000
est48=SSE227E,694,1296
est49=VSE612Z,697,1284
est50=SSF364E,699,1072
est51=SHG131Z,710,1013
est52=SSM358E,711,1082
est53=SSG182E,712,1071
est54=SHI622F,717,1341
est55=SSK629F,735,976
est56=SSG333F,748,1413
est57=SLD565Z,749,1000
est58=SSE490E,749,1109
est59=SSB740E,752,1106
est60=SHG131F,753,1118
est61=SSG677F,753,1186
est62=SSH855E,753,1146
est63=SSK408F,753,1061
est64=SSC402E,754,1109
est65=SSI350E,754,1194
est66=SSC692F,774,1313
est67=SSK170E,781,1198
est68=SSH607Z,785,1331
est69=VSF166Z,785,914
est70=SSE191Z,812,1428
est71=SSM116Z,819,1438
est72=SSA822Z,827,1102
est73=SSH375Z,832,1463
est74=SLA628Z,854,1170
est75=SSF589Z,861,1117
est76=SSE105F,867,1261
est77=SSH264Z,867,1330
est78=SSG879Z,879,1289
est79=SLH633F,884,1259
est80=SSD885F,886,1187
est81=SSF453E,886,1238
est82=SSB359E,887,1273
est83=SSK883E,891,1234
est84=SSJ629E,892,1242
est85=SSL326Z,896,1222
est86=SSG665E,900,1275
est87=SFJ825Z,901,1434
est88=SSJ326F,901,1493
est89=SSL348F,901,1112
est90=SSB635Z,910,1438
est91=SHC296Z,912,1094
est92=SSH387E,916,1441
est93=SSI750E,931,1701
est94=SSH424E,934,1277
est95=SFK689Z,989,1774
est96=SFH619F,1012,1632
est97=CHE848F,1013,1655
est98=SSF152Z,1038,1400
est99=SSM158Z,1040,1679
est100=SLJ139F,1054,1324
est101=SSB661F,1074,1300
est102=SSM556Z,1084,1542
est103=SSK544Z,1085,1675
est104=SLE112F,1094,1708
est105=SLI507E,1094,1648
est106=SSL411F,1096,1455
est107=VSA118Z,1111,1670
est108=SSE365Z,1116,1712
est109=SSC664F,1123,1637
est110=SSE765E,1124,1617
est111=SSL690F,1128,1468
est112=SSC624Z,1142,1301
est113=SSG687F,1144,1467
est114=SSH175Z,1146,1741
est115=SSM663Z,1147,1398
est116=SSK321Z,1151,1432
est117=SSI392E,1157,1993
est118=SSG183Z,1177,1518
est119=SHK316F,1181,1678
est120=SSE615Z,1187,1636
est121=SSB651F,1211,1526
est122=CHQ375Z,1221,1579
est123=SSA418Z,1226,1799
est124=SSK567Z,1228,1445
est125=SSC455Z,1229,1430
est126=SSB805F,1241,1751
est127=SSE105Z,1253,1644
est128=SHG230F,1266,1952
est129=SHD182F,1269,1592
est130=CHN894F,1272,1803
est131=SHB434F,1283,1592
est132=SHK145F,1283,1592
est133=SSL714E,1284,1881
est134=CHH611F,1288,1813
est135=SHB614F,1291,1594
est136=SLJ396F,1291,1572
est137=SHF346F,1294,1592
est138=SHH471F,1295,1592
est139=SHF230F,1296,1593
est140=SSH220E,1298,1574
est141=SHH471Z,1321,1601
est142=SHK145Z,1323,1514
est143=SSE450E,1327,1817
est144=SLE582Z,1329,1501
est145=SSM579F,1340,2055
est146=SSH439F,1341,1605
est147=SHA210F,1342,1647
est148=SSL539E,1354,2202
est149=SHG493F,1355,1590
est150=SHB855F,1361,1670
est151=SLC542E,1368,2063
est152=SHK887F,1372,1592
est153=SSG150E,1377,1614
est154=SLD642F,1378,1626
est155=AFJ615F,1382,1677
est156=AHC677F,1382,1677
est157=AHC677Z,1382,1665
est158=CHH116F,1382,1677
est159=VHB666F,1384,1676
est160=AHJ544F,1386,1677
est161=SSB540Z,1390,1809
est162=VFH831F,1397,1705
est163=SHJ744Z,1399,2224
est164=SSI252Z,1400,1654
est165=CHF675F,1401,1677
est166=SFI810Z,1410,2055
est167=SSI354F,1410,1976
est168=AHF808F,1412,1724
est169=VSA178Z,1414,1831
est170=SSK581Z,1422,1612
est171=SSL760Z,1426,1785
est172=SSL150F,1429,2046
est173=SSI139F,1457,2015
est174=SSA765Z,1461,1614
est175=SSC676Z,1476,1681
est176=SSC539Z,1477,1711
est177=SFK742F,1488,2115
est178=SHK253F,1529,2081
est179=SSD512Z,1543,2094
est180=VSJ329F,1621,1873
est181=VSJ329Z,1621,1855
est182=SFI810F,1661,2111
est183=SHD610Z,1669,2182
est184=SSA893Z,1703,2115
est185=SSI353Z,1843,2404
est186=VSF717E,1913,2712
est187=SLD642Z,1965,2217
est188=SLA546F,2007,2499
est189=SLH468Z,2052,2657
est190=SSM579Z,2052,2668
est191=SLB554Z,2065,2358
est192=SLB655Z,2353,2657
est193=SSF370F,2535,2914
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
Query= Contig-U16394-1 (Contig-U16394-1Q)
/CSM_Contig/Contig-U16394-1Q.Seq.d
(2914 letters)
Database: CSM
8402 sequences; 8,075,542 total letters
Score E
Sequences producing significant alignments: (bits) Value
Contig-U16394-1 (Contig-U16394-1Q) /CSM_Contig/Conti... 944 0.0
Contig-U15821-1 (Contig-U15821-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U13233-1 (Contig-U13233-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U12907-1 (Contig-U12907-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U12577-1 (Contig-U12577-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U10780-1 (Contig-U10780-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U15883-1 (Contig-U15883-1Q) /CSM_Contig/Conti... 42 0.005
Contig-U15408-1 (Contig-U15408-1Q) /CSM_Contig/Conti... 42 0.005
Contig-U12851-1 (Contig-U12851-1Q) /CSM_Contig/Conti... 42 0.005
Contig-U12564-1 (Contig-U12564-1Q) /CSM_Contig/Conti... 42 0.005
>Contig-U16394-1 (Contig-U16394-1Q) /CSM_Contig/Contig-U16394-1Q.Seq.d
Length = 2914
Score = 944 bits (476), Expect = 0.0
Identities = 490/497 (98%)
Strand = Plus / Plus
Query: 366 gtatgagtcctaatttgagatcaccaaaagcaaatagtaataagaatttattaggtggaa 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gtatgagtcctaatttgagatcaccaaaagcaaatagtaataagaatttattaggtggaa 425
Query: 426 ttcaaataatgctagtagatgatttagaggagacaacacatctattctcgtcgatgcttt 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ttcaaataatgctagtagatgatttagaggagacaacacatctattctcgtcgatgcttt 485
Query: 486 ataaattgggtgcaaaaagaattgatacttttcaacgcgtctctgatgcttatgcttttc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ataaattgggtgcaaaaagaattgatacttttcaacgcgtctctgatgcttatgcttttc 545
Query: 546 tctgtgattcaagtaaacctcaaccagatattatcctttccgatcttaccatgccatttg 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tctgtgattcaagtaaacctcaaccagatattatcctttccgatcttaccatgccatttg 605
Query: 606 aagatggttattcaatggttagaaaattaagagatagagaaaagattaacactcaaaatn 665
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 aagatggttattcaatggttagaaaattaagagatagagaaaagattaacactcaaaata 665
Query: 666 nnnnnnctccaatcattgctttaactgcttccgtttcctcatctgataaagaaaaggttt 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 aaaaaactccaatcattgctttaactgcttccgtttcctcatctgataaagaaaaggttt 725
Query: 726 taaaaagtggtttcgatttacattgttcaaaacctgtaaactttttagaactttcaaatt 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 taaaaagtggtttcgatttacattgttcaaaacctgtaaactttttagaactttcaaatt 785
Query: 786 caattttaactttaatcgaaaaatataatacaactgttaatattgatttaataaaggaac 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 caattttaactttaatcgaaaaatataatacaactgttaatattgatttaataaaggaac 845
Query: 846 aagaacagaacaacaac 862
|||||||||||||||||
Sbjct: 846 aagaacagaacaacaac 862
Score = 664 bits (335), Expect = 0.0
Identities = 338/338 (100%)
Strand = Plus / Plus
Query: 1562 ttctggaccctgtggtattggttgtgttgggtctggaaatgtatttgccgttgtaaataa 1621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1562 ttctggaccctgtggtattggttgtgttgggtctggaaatgtatttgccgttgtaaataa 1621
Query: 1622 aataccacaattattcacaccatcacaatatacagcccctggtataccagtggtttcaca 1681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1622 aataccacaattattcacaccatcacaatatacagcccctggtataccagtggtttcaca 1681
Query: 1682 aattgcaaatggctcaccttttgaaggtgtaaggattgatctttatcataaaccaagagg 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1682 aattgcaaatggctcaccttttgaaggtgtaaggattgatctttatcataaaccaagagg 1741
Query: 1742 ttcaanaggtacttggatgccaatcttaaaaggtgatcatattcgtgtcactgaaggaaa 1801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1742 ttcaanaggtacttggatgccaatcttaaaaggtgatcatattcgtgtcactgaaggaaa 1801
Query: 1802 aggtaaaagacttaaaatgattgtatattgcgagcatgaattaactaaagttggtttaca 1861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1802 aggtaaaagacttaaaatgattgtatattgcgagcatgaattaactaaagttggtttaca 1861
Query: 1862 agttggtttacttgatgttcaagatgttaatactactg 1899
||||||||||||||||||||||||||||||||||||||
Sbjct: 1862 agttggtttacttgatgttcaagatgttaatactactg 1899
Score = 470 bits (237), Expect = e-132
Identities = 237/237 (100%)
Strand = Plus / Plus
Query: 2327 gtagtgaagaattattattattagatgattttaaaataaccagaggtaaaacaccaaatg 2386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2327 gtagtgaagaattattattattagatgattttaaaataaccagaggtaaaacaccaaatg 2386
Query: 2387 gtgaaacaattgattttgacgatagtgaagatgctagtaattatcaagagaatggatgta 2446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2387 gtgaaacaattgattttgacgatagtgaagatgctagtaattatcaagagaatggatgta 2446
Query: 2447 aaataatagaaacttgtagagaatgtttagaatctgaaaagaatgaaccatattgttcaa 2506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2447 aaataatagaaacttgtagagaatgtttagaatctgaaaagaatgaaccatattgttcaa 2506
Query: 2507 ctaatcatagaattaaaatgttttgtgaagataatgaatcaatacgatttatttctt 2563
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2507 ctaatcatagaattaaaatgttttgtgaagataatgaatcaatacgatttatttctt 2563
Score = 436 bits (220), Expect = e-122
Identities = 220/220 (100%)
Strand = Plus / Plus
Query: 103 ctctcttttaaaaactattattacaaatgcaataaataataacattaataatagtaacaa 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ctctcttttaaaaactattattacaaatgcaataaataataacattaataatagtaacaa 162
Query: 163 cgatgataacagtaataatactacaataccaacacctccaagttcagcaattaacatgat 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 cgatgataacagtaataatactacaataccaacacctccaagttcagcaattaacatgat 222
Query: 223 taattcattaccattaccatcgccatcaccatcatttattttaccaactttatcaccatt 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 taattcattaccattaccatcgccatcaccatcatttattttaccaactttatcaccatt 282
Query: 283 ctcatctcctttatctgaattaaaatcatcgtcaaacaac 322
||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctcatctcctttatctgaattaaaatcatcgtcaaacaac 322
Score = 289 bits (146), Expect = 1e-77
Identities = 146/146 (100%)
Strand = Plus / Plus
Query: 1252 gagtttggccattagcccaactcattaactttagatttgttccaagtcacctccgtgttc 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1252 gagtttggccattagcccaactcattaactttagatttgttccaagtcacctccgtgttc 1311
Query: 1312 tctttggtaaccttgttggtttctgttggggaatctatttatcaatccttgctactaaaa 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1312 tctttggtaaccttgttggtttctgttggggaatctatttatcaatccttgctactaaaa 1371
Query: 1372 agagaaactaaattaattaaactaga 1397
||||||||||||||||||||||||||
Sbjct: 1372 agagaaactaaattaattaaactaga 1397
Score = 151 bits (76), Expect = 7e-36
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 2744 ttaaagaaagaaaaagaataagttcattacaaaataatgaaaggttggcaaaacagttaa 2803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2744 ttaaagaaagaaaaagaataagttcattacaaaataatgaaaggttggcaaaacagttaa 2803
Query: 2804 ataaagtttaataaat 2819
||||||||||||||||
Sbjct: 2804 ataaagtttaataaat 2819
Score = 131 bits (66), Expect = 7e-30
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1055 aactaccacaacattttcataatatacaacaacaacaacaagaggatcaattacaaaata 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 aactaccacaacattttcataatatacaacaacaacaacaagaggatcaattacaaaata 1114
Query: 1115 ctcaanaac 1123
|||||||||
Sbjct: 1115 ctcaanaac 1123
Score = 117 bits (59), Expect = 1e-25
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 9 ttaatttagaaatatcacaaatcccatcaacaaatttaaatccaaaattatctttggtt 67
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ttaatttagaaatatcacaaatcccatcaacaaatttaaatccaaaattatctttggtt 67
Score = 107 bits (54), Expect = 1e-22
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 1975 gttttttaaaacacataaaccaataacttnnnnnnnnctaatatataataattattaatt 2034
||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1975 gttttttaaaacacataaaccaataacttaaaaaaaactaatatataataattattaatt 2034
Query: 2035 tcattaaaattttaattg 2052
||||||||||||||||||
Sbjct: 2035 tcattaaaattttaattg 2052
Score = 101 bits (51), Expect = 6e-21
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 1174 cctcaacnaacgaacatgagtaccccaaaaaatacaatattaccaaatattacc 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 cctcaacnaacgaacatgagtaccccaaaaaatacaatattaccaaatattacc 1227
Score = 67.9 bits (34), Expect = 8e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 2659 cctaaaattgaaaaaacttccgcaattaatataa 2692
||||||||||||||||||||||||||||||||||
Sbjct: 2659 cctaaaattgaaaaaacttccgcaattaatataa 2692
>Contig-U15821-1 (Contig-U15821-1Q) /CSM_Contig/Contig-U15821-1Q.Seq.d
Length = 1827
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 145 cattaataatagtaacaacgatgataacagtaataata 182
|||||||||||||||||| || |||| ||||||||||
Sbjct: 537 cattaataatagtaacaataataataatagtaataata 574
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 906 acaacaacaacaacaa 921
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 933 acaacaacaacaacaa 948
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 801 acaacaacaacaacaa 816
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 927 acaacaacaacaacaa 942
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 798 acaacaacaacaacaa 813
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 948 acaacaacaacaacaa 963
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 924 acaacaacaacaacaa 939
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 825 acaacaacaacaacaa 840
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 951 acaacaacaacaacaa 966
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 930 acaacaacaacaacaa 945
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 909 acaacaacaacaacaa 924
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 939 acaacaacaacaacaa 954
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 945 acaacaacaacaacaa 960
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 828 acaacaacaacaacaa 843
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 912 acaacaacaacaacaa 927
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 915 acaacaacaacaacaa 930
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 921 acaacaacaacaacaa 936
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 918 acaacaacaacaacaa 933
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 936 acaacaacaacaacaa 951
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 942 acaacaacaacaacaa 957
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 822 acaacaacaacaacaa 837
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 954 acaacaacaacaacaa 969
Score = 32.2 bits (16), Expect = 4.6
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1080 acaacaacaacaacaa 1095
||||||||||||||||
Sbjct: 795 acaacaacaacaacaa 810
>Contig-U13233-1 (Contig-U13233-1Q) /CSM_Contig/Contig-U13233-1Q.Seq.d
Length = 1876
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 784 ttcaattttaactttaatcgaaaaat 809
||||||||||||||||||||| ||||
Sbjct: 1773 ttcaattttaactttaatcgataaat 1748
Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 75,741
Number of Sequences: 8402
Number of extensions: 75741
Number of successful extensions: 24264
Number of sequences better than 10.0: 1206
length of query: 2914
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2897
effective length of database: 7,932,708
effective search space: 22981055076
effective search space used: 22981055076
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
|
| dna update |
2009. 3.30 |
| Homology vs DNA |
Query= Contig-U16394-1 (Contig-U16394-1Q) /CSM_Contig/Contig-U16394-1Q.Seq.d
(2914 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AF361475) Dictyostelium discoideum double histidine kinase ... 593 0.0 4
(C83962) Dictyostelium discoideum slug cDNA, clone SLK607. 379 0.0 2
(AU060990) Dictyostelium discoideum slug cDNA, clone SLC542. 666 0.0 1
(AU034300) Dictyostelium discoideum slug cDNA, clone SLC542. 666 0.0 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 470 e-127 1
(AU265672) Dictyostelium discoideum vegetative cDNA clone:VS... 470 e-127 1
(AY392430) Dictyostelium discoideum heat shock protein 88 ge... 226 4e-54 1
(AU261289) Dictyostelium discoideum vegetative cDNA clone:VS... 226 4e-54 1
(C93360) Dictyostelium discoideum slug cDNA, clone SSM670. 226 4e-54 1
(C92585) Dictyostelium discoideum slug cDNA, clone SSF152. 226 4e-54 1
(AU053378) Dictyostelium discoideum slug cDNA, clone SLI507. 222 6e-53 1
(AU062228) Dictyostelium discoideum slug cDNA, clone SLI507. 220 2e-52 1
(AU051904) Dictyostelium discoideum slug cDNA, clone SSC359. 190 2e-43 1
(AU072904) Dictyostelium discoideum slug cDNA, clone SSF370. 60 2e-13 2
(ER579750) 1093015830571 Global-Ocean-Sampling_GS-36-01-01-2... 60 5e-04 1
(ER458614) 1092963878850 Global-Ocean-Sampling_GS-35-01-01-1... 60 5e-04 1
(EK515908) 1095515499127 Global-Ocean-Sampling_GS-32-01-01-1... 60 5e-04 1
(EJ664847) 1092955037487 Global-Ocean-Sampling_GS-30-02-01-1... 60 5e-04 1
(EJ656181) 1092955006884 Global-Ocean-Sampling_GS-30-02-01-1... 60 5e-04 1
(FB357235) Sequence 94 from Patent WO2006119775. 40 0.074 2
(AL954745) Human DNA sequence from clone CITF22-65C6 on chro... 40 0.081 2
(EV833200) TT1DC79TV Tetrahymena thermophila SB210 cDNA libr... 36 0.093 2
(AC142032) Rattus norvegicus clone CH230-252C4, *** SEQUENCI... 52 0.12 1
(AC123466) Rattus norvegicus clone CH230-18J2, WORKING DRAFT... 52 0.12 1
(AC184528) Strongylocentrotus purpuratus clone R3-3110F15, W... 52 0.12 1
(ER625627) 1093017607787 Global-Ocean-Sampling_GS-36-01-01-2... 52 0.12 1
(ER617079) 1093017288137 Global-Ocean-Sampling_GS-36-01-01-2... 52 0.12 1
(ER596125) 1093016223616 Global-Ocean-Sampling_GS-36-01-01-2... 52 0.12 1
(ER571919) 1093015795822 Global-Ocean-Sampling_GS-36-01-01-2... 52 0.12 1
(EJ704789) 1092956049499 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.12 1
(EJ691236) 1092956003961 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.12 1
(EJ653510) 1092954009343 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.12 1
(EJ647295) 1092351918301 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.12 1
(EJ565796) 1092959711912 Global-Ocean-Sampling_GS-29-01-01-1... 52 0.12 1
(EJ524043) 1092955168963 Global-Ocean-Sampling_GS-29-01-01-1... 52 0.12 1
(EJ444159) 1093015318033 Global-Ocean-Sampling_GS-28-01-01-1... 52 0.12 1
(EJ436503) 1093015283933 Global-Ocean-Sampling_GS-28-01-01-1... 52 0.12 1
(EJ415586) 1093012178512 Global-Ocean-Sampling_GS-28-01-01-1... 52 0.12 1
(EJ395376) 1093011994660 Global-Ocean-Sampling_GS-28-01-01-1... 52 0.12 1
(EJ248711) 1095344005058 Global-Ocean-Sampling_GS-27-01-01-1... 52 0.12 1
(EJ166057) 1092344066031 Global-Ocean-Sampling_GS-27-01-01-1... 52 0.12 1
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 36 1.0 2
(AF362371) Dictyostelium discoideum histidine kinase DhkI (d... 36 1.2 2
(EV833199) TT1DC79TH Tetrahymena thermophila SB210 cDNA libr... 36 1.3 2
(AL513470) Mouse DNA sequence from clone RP21-464E5 on chrom... 48 1.9 1
(AC164406) Mus musculus chromosome 3, clone RP24-391L20, com... 48 1.9 1
(AC162692) Mus musculus chromosome 1, clone RP23-445K23, com... 48 1.9 1
(AC139206) Mus musculus chromosome 1, clone RP23-82P18, comp... 48 1.9 1
(AC100907) Mus musculus clone RP23-70I2, LOW-PASS SEQUENCE S... 48 1.9 1
(AC178363) Strongylocentrotus purpuratus clone R3-3107B10, W... 48 1.9 1
(AC177748) Strongylocentrotus purpuratus clone R3-1008C10, W... 48 1.9 1
(DT547199) EST1057839 GH_TMO Gossypium hirsutum cDNA, mRNA s... 48 1.9 1
(AC174546) Strongylocentrotus purpuratus clone R3-3112O4, WO... 36 3.7 2
(DE326552) Bombyx mori genomic DNA, BAC clone:BES_645_I06. 32 4.8 2
(AZ668648) ENTIH15TF Entamoeba histolytica Sheared DNA Entam... 44 4.9 2
(DE315886) Bombyx mori genomic DNA, BAC clone:BES_607_P23. 32 4.9 2
(DE366189) Bombyx mori genomic DNA, BAC clone:BET_616_F21. 32 4.9 2
(AZ530136) ENTBH60TR Entamoeba histolytica Sheared DNA Entam... 44 5.0 2
(AZ547554) ENTCX91TR Entamoeba histolytica Sheared DNA Entam... 44 5.1 2
(EJ351786) 1092963592965 Global-Ocean-Sampling_GS-28-01-01-1... 40 5.5 3
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 34 6.4 8
(AC024591) Homo sapiens chromosome 16 clone RP11-511G21, com... 42 7.2 2
(CR931799) Zebrafish DNA sequence from clone DKEY-65J4 in li... 46 7.4 1
(BS000591) Pan troglodytes chromosome Y clone:PTB-113D22. 46 7.4 1
(AC192570) Pan troglodytes BAC clone CH251-573F15 from chrom... 46 7.4 1
(AC146457) Pan troglodytes BAC clone CH251-330N17 from Y, co... 46 7.4 1
(AC145827) Pan troglodytes clone rp43-51h23, complete sequence. 46 7.4 1
(AC108686) Homo sapiens X BAC RP11-263A21 (Roswell Park Canc... 46 7.4 1
(AC104634) Homo sapiens BAC clone RP11-793L24 from 2, comple... 46 7.4 1
(AC092832) Homo sapiens X BAC RP11-494I9 (Roswell Park Cance... 46 7.4 1
(AC079449) Homo sapiens BAC clone RP11-260E20 from 2, comple... 46 7.4 1
(AC011811) Homo sapiens clone b250a12, complete sequence. 46 7.4 1
(AC007034) Homo sapiens BAC clone RP11-99M1 from Y, complete... 46 7.4 1
(AC137256) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 46 7.4 1
(AC129627) Rattus norvegicus clone CH230-421M15, WORKING DRA... 46 7.4 1
(AC128455) Rattus norvegicus clone CH230-86M16, *** SEQUENCI... 46 7.4 1
(AC097133) Rattus norvegicus clone CH230-60M20, *** SEQUENCI... 46 7.4 1
(AC083832) Homo sapiens chromosome UL clone RP11-668I23, WOR... 46 7.4 1
(AC073449) Homo sapiens clone RP11-154A7, LOW-PASS SEQUENCE ... 46 7.4 1
(AC180928) Strongylocentrotus purpuratus clone R3-3026I08, W... 46 7.4 1
(AC179200) Strongylocentrotus purpuratus clone R3-4019J21, W... 46 7.4 1
(AC177224) Strongylocentrotus purpuratus clone R3-1034L15, W... 46 7.4 1
(AC020587) Homo sapiens chromosome 1 clone RP11-99F3, WORKIN... 46 7.4 1
(AQ744000) HS_5504_A1_G07_T7A RPCI-11 Human Male BAC Library... 46 7.4 1
(AQ743952) HS_5504_A1_C07_T7A RPCI-11 Human Male BAC Library... 46 7.4 1
(DV995923) GQ02784.B3_F04 GQ099: Mixed spruce tissues Picea ... 46 7.4 1
(DR909318) USDA-FP_17446 Citrus sinensis phloem Citrus sinen... 46 7.4 1
(CX669060) UCRCP01_041_F07_T3 Swingle citrumelo nematode-cha... 46 7.4 1
(CX667587) UCRCP01_032_A11_T3 Swingle citrumelo nematode-cha... 46 7.4 1
(CV707059) UCRPT01_0009E07_f Poncirus trifoliata CTV-challen... 46 7.4 1
(CV706603) UCRPT01_0008J11_r Poncirus trifoliata CTV-challen... 46 7.4 1
(CO469460) MZCCS20051H01.g Maize Endosperm cDNA Library Zea ... 46 7.4 1
(CK437289) GQ0041.BR_E21 GQ004: Non-lignified secondary xyle... 46 7.4 1
(CD201540) MS1-0128T-L377-D10-U.B MS1-0128 Schistosoma manso... 46 7.4 1
(BX560701) Glossina morsitans morsitans (Tseatse fly) EST fr... 46 7.4 1
(BI744642) rk89f03.y1 Meloidogyne javanica egg pAMP1 v6 Chia... 46 7.4 1
(GE473487) GQ0041.B3.r_E21 GQ004: Non-lignified secondary xy... 46 7.4 1
(FL643555) TS29-E6 Reticulitermes flavipes symbiont library ... 46 7.4 1
(AC013661) Homo sapiens clone RP11-20A18, LOW-PASS SEQUENCE ... 42 8.3 2
>(AF361475) Dictyostelium discoideum double histidine kinase DhkD
(dhkD) gene, complete cds.
Length = 5191
Score = 593 bits (299), Expect(4) = 0.0
Identities = 299/299 (100%)
Strand = Plus / Plus
Query: 366 gtatgagtcctaatttgagatcaccaaaagcaaatagtaataagaatttattaggtggaa 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4527 gtatgagtcctaatttgagatcaccaaaagcaaatagtaataagaatttattaggtggaa 4586
Query: 426 ttcaaataatgctagtagatgatttagaggagacaacacatctattctcgtcgatgcttt 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4587 ttcaaataatgctagtagatgatttagaggagacaacacatctattctcgtcgatgcttt 4646
Query: 486 ataaattgggtgcaaaaagaattgatacttttcaacgcgtctctgatgcttatgcttttc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4647 ataaattgggtgcaaaaagaattgatacttttcaacgcgtctctgatgcttatgcttttc 4706
Query: 546 tctgtgattcaagtaaacctcaaccagatattatcctttccgatcttaccatgccatttg 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4707 tctgtgattcaagtaaacctcaaccagatattatcctttccgatcttaccatgccatttg 4766
Query: 606 aagatggttattcaatggttagaaaattaagagatagagaaaagattaacactcaaaat 664
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4767 aagatggttattcaatggttagaaaattaagagatagagaaaagattaacactcaaaat 4825
Score = 379 bits (191), Expect(4) = 0.0
Identities = 191/191 (100%)
Strand = Plus / Plus
Query: 672 ctccaatcattgctttaactgcttccgtttcctcatctgataaagaaaaggttttaaaaa 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4833 ctccaatcattgctttaactgcttccgtttcctcatctgataaagaaaaggttttaaaaa 4892
Query: 732 gtggtttcgatttacattgttcaaaacctgtaaactttttagaactttcaaattcaattt 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4893 gtggtttcgatttacattgttcaaaacctgtaaactttttagaactttcaaattcaattt 4952
Query: 792 taactttaatcgaaaaatataatacaactgttaatattgatttaataaaggaacaagaac 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4953 taactttaatcgaaaaatataatacaactgttaatattgatttaataaaggaacaagaac 5012
Query: 852 agaacaacaac 862
|||||||||||
Sbjct: 5013 agaacaacaac 5023
Score = 262 bits (132), Expect(4) = 0.0
Identities = 132/132 (100%)
Strand = Plus / Plus
Query: 191 ccaacacctccaagttcagcaattaacatgattaattcattaccattaccatcgccatca 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4352 ccaacacctccaagttcagcaattaacatgattaattcattaccattaccatcgccatca 4411
Query: 251 ccatcatttattttaccaactttatcaccattctcatctcctttatctgaattaaaatca 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4412 ccatcatttattttaccaactttatcaccattctcatctcctttatctgaattaaaatca 4471
Query: 311 tcgtcaaacaac 322
||||||||||||
Sbjct: 4472 tcgtcaaacaac 4483
Score = 117 bits (59), Expect(4) = 0.0
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 9 ttaatttagaaatatcacaaatcccatcaacaaatttaaatccaaaattatctttggtt 67
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4170 ttaatttagaaatatcacaaatcccatcaacaaatttaaatccaaaattatctttggtt 4228
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,816,568,322
Number of extensions: 119351547
Number of successful extensions: 12267333
Number of sequences better than 10.0: 99
Length of query: 2914
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 2889
Effective length of database: 96,311,147,814
Effective search space: 278242906034646
Effective search space used: 278242906034646
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)
|
| protein update |
2009. 7.28 |
| Homology vs Protein |
Query= Contig-U16394-1 (Contig-U16394-1Q) /CSM_Contig/Contig-U16394-1Q.Seq.d
(2914 letters)
Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54SP4) RecName: Full=Hybrid signal transduction histidine kina... 302 4e-80
AF361475_1(AF361475|pid:none) Dictyostelium discoideum double hi... 302 4e-80
AC116957_94(AC116957|pid:none) Dictyostelium discoideum chromoso... 165 1e-38
(Q54GD8) RecName: Full=PXMP2/4 family protein 3; Flags: Precursor; 90 5e-16
CP001037_2637(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 85 2e-14
CP001037_1722(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 82 9e-14
BX842656_69(BX842656|pid:none) Bdellovibrio bacteriovorus comple... 82 1e-13
CP000117_2758(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 79 7e-13
AM746676_2658(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 78 2e-12
CP001037_5929(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 77 3e-12
CP000117_1084(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 77 3e-12
CP000769_3754(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 75 1e-11
CP001037_3146(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 74 2e-11
CP000117_3798(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 74 3e-11
CP001037_2054(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 74 4e-11
CP001344_4331(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 74 4e-11
CP000117_1712(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 73 5e-11
BX842650_59(BX842650|pid:none) Bdellovibrio bacteriovorus comple... 73 7e-11
AB2304(AB2304) two-component hybrid sensor and regulator all3985... 72 9e-11
CP001037_4011(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 72 9e-11
AP008231_2277(AP008231|pid:none) Synechococcus elongatus PCC 630... 72 9e-11
CP000471_2086(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 72 2e-10
AC2236(AC2236) two-component hybrid sensor and regulator alr3442... 72 2e-10
AM746676_532(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 71 2e-10
CR522870_359(CR522870|pid:none) Desulfotalea psychrophila LSv54 ... 71 2e-10
CP000117_3448(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 71 3e-10
AF1829(AF1829) two-component hybrid sensor and regulator all0182... 71 3e-10
AM746676_8844(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 70 3e-10
CP001037_2048(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 70 3e-10
CP001037_4623(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 70 4e-10
CP000100_1815(CP000100|pid:none) Synechococcus elongatus PCC 794... 70 4e-10
CP000471_259(CP000471|pid:none) Magnetococcus sp. MC-1, complete... 70 4e-10
CP001344_3503(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 70 6e-10
CP001037_1619(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 69 8e-10
CP001344_1862(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 69 8e-10
CP001344_1571(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 69 8e-10
CP001147_1294(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 69 8e-10
CP000155_4702(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 69 1e-09
CP000721_2481(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 69 1e-09
CP000926_2994(CP000926|pid:none) Pseudomonas putida GB-1, comple... 69 1e-09
AM746676_4372(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 69 1e-09
AM746676_6839(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 68 2e-09
CP000103_1485(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 68 2e-09
CP001111_447(CP001111|pid:none) Stenotrophomonas maltophilia R55... 68 2e-09
AM286690_1307(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 68 2e-09
AM746676_7172(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 67 3e-09
BA000045_99(BA000045|pid:none) Gloeobacter violaceus PCC 7421 DN... 67 3e-09
AJ428204_1(AJ428204|pid:none) Prevotella bryantii xynR gene, xyn... 67 3e-09
CP001101_2026(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 67 3e-09
CP001037_3165(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 67 4e-09
CP000471_459(CP000471|pid:none) Magnetococcus sp. MC-1, complete... 67 4e-09
AM743169_540(AM743169|pid:none) Stenotrophomonas maltophilia K27... 67 4e-09
CP000089_1809(CP000089|pid:none) Dechloromonas aromatica RCB, co... 67 4e-09
CP001037_3142(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 67 4e-09
AM746676_1261(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 67 5e-09
AP007226_11(AP007226|pid:none) Oryza sativa Japonica Group genom... 67 5e-09
CP000117_2662(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 67 5e-09
CP000447_2485(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 67 5e-09
CP001344_3002(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 66 6e-09
CP001087_3291(CP001087|pid:none) Desulfobacterium autotrophicum ... 66 6e-09
CP001344_4134(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 66 6e-09
BX294133_87(BX294133|pid:none) Rhodopirellula baltica SH 1 compl... 66 6e-09
CP001069_17(CP001069|pid:none) Ralstonia pickettii 12J chromosom... 66 8e-09
AJ937747_1(AJ937747|pid:none) Populus x Canadensis mRNA for osmo... 66 8e-09
AF258796_1(AF258796|pid:none) Dictyostelium discoideum hybrid hi... 65 1e-08
AF362373_1(AF362373|pid:none) Dictyostelium discoideum histidine... 65 1e-08
BX842647_191(BX842647|pid:none) Bdellovibrio bacteriovorus compl... 65 1e-08
CP000121_155(CP000121|pid:none) Anabaena variabilis ATCC 29413 p... 65 1e-08
CP000777_1461(CP000777|pid:none) Leptospira biflexa serovar Pato... 65 1e-08
CP000471_1872(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 65 1e-08
CU694393_403(CU694393|pid:none) Ralstonia solanacearum strain Mo... 65 1e-08
CR626927_2638(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 65 2e-08
CP000943_3347(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 65 2e-08
CP000529_1689(CP000529|pid:none) Polaromonas naphthalenivorans C... 65 2e-08
AM747721_1506(AM747721|pid:none) Burkholderia cenocepacia J2315 ... 65 2e-08
CP001291_4869(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 65 2e-08
CP000153_1917(CP000153|pid:none) Sulfurimonas denitrificans DSM ... 65 2e-08
AM746676_8730(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 65 2e-08
CP001229_644(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 64 2e-08
CP001344_1572(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 64 2e-08
CP000140_3387(CP000140|pid:none) Parabacteroides distasonis ATCC... 64 3e-08
CP000789_2207(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 64 3e-08
AE2469(AE2469) two-component hybrid sensor and regulator all5309... 64 3e-08
AP009386_1064(AP009386|pid:none) Burkholderia multivorans ATCC 1... 64 3e-08
CP000469_3314(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 64 3e-08
CP001344_4327(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 64 3e-08
BA000040_2285(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 64 3e-08
CP000875_1215(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 64 3e-08
CP000117_2552(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 64 4e-08
CT971583_2271(CT971583|pid:none) Synechococcus WH7803 complete g... 64 4e-08
BX842656_34(BX842656|pid:none) Bdellovibrio bacteriovorus comple... 64 4e-08
AE015451_4759(AE015451|pid:none) Pseudomonas putida KT2440 compl... 64 4e-08
AG1928(AG1928) two-component hybrid sensor and regulator all0978... 64 4e-08
AP010904_786(AP010904|pid:none) Desulfovibrio magneticus RS-1 DN... 64 4e-08
CP001344_542(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 64 4e-08
AE008923_3634(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 63 5e-08
CP000494_4058(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 63 5e-08
CP000103_1185(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 63 5e-08
AE013598_687(AE013598|pid:none) Xanthomonas oryzae pv. oryzae KA... 63 5e-08
CP000379_998(CP000379|pid:none) Burkholderia cenocepacia AU 1054... 63 7e-08
CP001344_3840(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 63 7e-08
BA000045_2272(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 63 7e-08
CP000252_2795(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 63 7e-08
AP009387_390(AP009387|pid:none) Burkholderia multivorans ATCC 17... 63 7e-08
CP001026_1145(CP001026|pid:none) Burkholderia ambifaria MC40-6 c... 63 7e-08
AE013598_2283(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 63 7e-08
CP000959_2758(CP000959|pid:none) Burkholderia cenocepacia MC0-3 ... 63 7e-08
AM920689_3868(AM920689|pid:none) Xanthomonas campestris pv. camp... 62 9e-08
AE015928_1264(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 62 9e-08
AD2215(AD2215) two-component hybrid sensor and regulator all3275... 62 9e-08
CP000644_3659(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 62 9e-08
CP001037_2111(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 62 9e-08
CP001089_3486(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 62 9e-08
CP000117_362(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 62 9e-08
CP000091_1442(CP000091|pid:none) Ralstonia eutropha JMP134 chrom... 62 9e-08
CP000749_352(CP000749|pid:none) Marinomonas sp. MWYL1, complete ... 62 9e-08
CP001037_1132(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 62 1e-07
CP000462_395(CP000462|pid:none) Aeromonas hydrophila subsp. hydr... 62 1e-07
AE008923_2024(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 62 1e-07
AE014299_3889(AE014299|pid:none) Shewanella oneidensis MR-1, com... 62 2e-07
AE017180_2561(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 62 2e-07
CP000083_4035(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 62 2e-07
CP001087_3293(CP001087|pid:none) Desulfobacterium autotrophicum ... 62 2e-07
CR954246_1112(CR954246|pid:none) Pseudoalteromonas haloplanktis ... 62 2e-07
CP000949_4588(CP000949|pid:none) Pseudomonas putida W619, comple... 62 2e-07
CP000958_1296(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ... 62 2e-07
CP000155_1722(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 62 2e-07
AE016825_1579(AE016825|pid:none) Chromobacterium violaceum ATCC ... 61 2e-07
CP001344_1570(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 61 2e-07
CT573072_909(CT573072|pid:none) Kuenenia stuttgartiensis genome ... 61 2e-07
AP010904_3436(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 61 2e-07
AE008922_2114(AE008922|pid:none) Xanthomonas campestris pv. camp... 61 2e-07
CP001645_336(CP001645|pid:none) Ralstonia pickettii 12D chromoso... 61 2e-07
CP001087_4453(CP001087|pid:none) Desulfobacterium autotrophicum ... 61 2e-07
AM920689_2053(AM920689|pid:none) Xanthomonas campestris pv. camp... 61 2e-07
CP000471_3150(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 61 2e-07
CP001069_1086(CP001069|pid:none) Ralstonia pickettii 12J chromos... 61 2e-07
CP000302_3698(CP000302|pid:none) Shewanella denitrificans OS217,... 61 2e-07
CP001344_3497(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 61 3e-07
CP001649_3310(CP001649|pid:none) Desulfovibrio salexigens DSM 26... 61 3e-07
BA000031_1547(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 61 3e-07
CP000462_2361(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 61 3e-07
CP000859_981(CP000859|pid:none) Desulfococcus oleovorans Hxd3, c... 61 3e-07
AM236086_713(AM236086|pid:none) Rhizobium leguminosarum bv. vici... 61 3e-07
AP010904_1844(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 61 3e-07
CP000304_3480(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 61 3e-07
CP000926_4845(CP000926|pid:none) Pseudomonas putida GB-1, comple... 61 3e-07
CP000075_4407(CP000075|pid:none) Pseudomonas syringae pv. syring... 61 3e-07
AE005673_917(AE005673|pid:none) Caulobacter crescentus CB15, com... 61 3e-07
CP001186_3142(CP001186|pid:none) Bacillus cereus G9842, complete... 60 4e-07
CP000138_265(CP000138|pid:none) Rhizobium etli CFN 42 plasmid p4... 60 4e-07
CP000471_2637(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 60 4e-07
CP001037_1482(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 60 4e-07
CP000544_2119(CP000544|pid:none) Halorhodospira halophila SL1, c... 60 4e-07
CP000089_2861(CP000089|pid:none) Dechloromonas aromatica RCB, co... 60 4e-07
CP001192_945(CP001192|pid:none) Rhizobium leguminosarum bv. trif... 60 4e-07
CP001649_2611(CP001649|pid:none) Desulfovibrio salexigens DSM 26... 60 4e-07
CP001077_458(CP001077|pid:none) Rhizobium etli CIAT 652 plasmid ... 60 4e-07
CP000644_2119(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 60 5e-07
CP001503_1123(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 60 5e-07
CP000058_4255(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 60 5e-07
CP000512_2924(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 60 5e-07
AL591985_346(AL591985|pid:none) Sinorhizobium meliloti 1021 plas... 60 5e-07
CP000514_2654(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 60 5e-07
AP010904_3273(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 60 5e-07
AY456035_1(AY456035|pid:none) Gibberella moniliformis putative h... 60 5e-07
CP000472_1341(CP000472|pid:none) Shewanella piezotolerans WP3, c... 60 6e-07
AE016795_2427(AE016795|pid:none) Vibrio vulnificus CMCP6 chromos... 60 6e-07
CP000117_314(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 60 6e-07
CP000094_611(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, c... 60 6e-07
CP000148_2963(CP000148|pid:none) Geobacter metallireducens GS-15... 60 6e-07
CP001154_105(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 60 6e-07
AM295250_1854(AM295250|pid:none) Staphylococcus carnosus subsp. ... 59 8e-07
CP001654_1026(CP001654|pid:none) Dickeya dadantii Ech703, comple... 59 8e-07
CP000685_3330(CP000685|pid:none) Flavobacterium johnsoniae UW101... 59 8e-07
CP000680_168(CP000680|pid:none) Pseudomonas mendocina ymp, compl... 59 8e-07
CP000616_244(CP000616|pid:none) Burkholderia vietnamiensis G4 ch... 59 8e-07
CP000282_1919(CP000282|pid:none) Saccharophagus degradans 2-40, ... 59 8e-07
CP001147_178(CP001147|pid:none) Thermodesulfovibrio yellowstonii... 59 8e-07
AP010904_4171(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 59 8e-07
CP000152_1637(CP000152|pid:none) Burkholderia sp. 383 chromosome... 59 8e-07
CP000103_1484(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 59 8e-07
CP000140_740(CP000140|pid:none) Parabacteroides distasonis ATCC ... 59 8e-07
BX294148_151(BX294148|pid:none) Rhodopirellula baltica SH 1 comp... 59 8e-07
CP000469_3988(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 59 8e-07
CP001634_438(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, co... 59 8e-07
CP000155_5040(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 59 8e-07
CP000884_3815(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 59 8e-07
CP000830_820(CP000830|pid:none) Dinoroseobacter shibae DFL 12, c... 59 1e-06
FM209186_5241(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 59 1e-06
CP000026_556(CP000026|pid:none) Salmonella enterica subsp. enter... 59 1e-06
DQ121376_3(DQ121376|pid:none) Uncultured bacterium clone YC01G10... 59 1e-06
CP000471_3232(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 59 1e-06
AE004091_4852(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 59 1e-06
CP000749_1075(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 59 1e-06
CP001089_566(CP001089|pid:none) Geobacter lovleyi SZ, complete g... 59 1e-06
BX842647_202(BX842647|pid:none) Bdellovibrio bacteriovorus compl... 59 1e-06
CU234118_3730(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 59 1e-06
CP001020_1442(CP001020|pid:none) Coxiella burnetii CbuK_Q154, co... 59 1e-06
CP000388_2234(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 59 1e-06
CP000514_3728(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 59 1e-06
CP001614_1784(CP001614|pid:none) Teredinibacter turnerae T7901, ... 59 1e-06
CP000679_2207(CP000679|pid:none) Caldicellulosiruptor saccharoly... 59 1e-06
CP001019_1217(CP001019|pid:none) Coxiella burnetii CbuG_Q212, co... 59 1e-06
CP000438_5167(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 59 1e-06
AP009386_950(AP009386|pid:none) Burkholderia multivorans ATCC 17... 59 1e-06
CT573326_4520(CT573326|pid:none) Pseudomonas entomophila str. L4... 59 1e-06
AP009386_624(AP009386|pid:none) Burkholderia multivorans ATCC 17... 59 1e-06
CP000031_160(CP000031|pid:none) Ruegeria pomeroyi DSS-3, complet... 59 1e-06
CP000442_69(CP000442|pid:none) Burkholderia ambifaria AMMD chrom... 59 1e-06
CP000869_1532(CP000869|pid:none) Burkholderia multivorans ATCC 1... 59 1e-06
AM747721_2768(AM747721|pid:none) Burkholderia cenocepacia J2315 ... 59 1e-06
CP000089_2758(CP000089|pid:none) Dechloromonas aromatica RCB, co... 59 1e-06
AE017180_1276(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 59 1e-06
CP000140_3225(CP000140|pid:none) Parabacteroides distasonis ATCC... 59 1e-06
CP001393_1679(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 59 1e-06
CP000560_524(CP000560|pid:none) Bacillus amyloliquefaciens FZB42... 58 2e-06
CP000738_921(CP000738|pid:none) Sinorhizobium medicae WSM419, co... 58 2e-06
CP000471_3312(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 58 2e-06
AM286690_2018(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 58 2e-06
CP001344_3340(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 58 2e-06
CP000148_2757(CP000148|pid:none) Geobacter metallireducens GS-15... 58 2e-06
CP001089_1527(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 58 2e-06
CP000680_3621(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 58 2e-06
AM746676_7820(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 58 2e-06
CP000282_1407(CP000282|pid:none) Saccharophagus degradans 2-40, ... 58 2e-06
CP000393_3513(CP000393|pid:none) Trichodesmium erythraeum IMS101... 58 2e-06
CP001191_1281(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 58 2e-06
CP001654_2035(CP001654|pid:none) Dickeya dadantii Ech703, comple... 58 2e-06
CP000153_219(CP000153|pid:none) Sulfurimonas denitrificans DSM 1... 58 2e-06
CP001089_554(CP001089|pid:none) Geobacter lovleyi SZ, complete g... 58 2e-06
AE008923_1261(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 58 2e-06
BX842651_14(BX842651|pid:none) Bdellovibrio bacteriovorus comple... 58 2e-06
CP000721_3021(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 58 2e-06
AE017282_1130(AE017282|pid:none) Methylococcus capsulatus str. B... 58 2e-06
CP001322_2004(CP001322|pid:none) Desulfatibacillum alkenivorans ... 58 2e-06
DQ180352_6(DQ180352|pid:none) Vibrio cholerae integrating conjug... 58 2e-06
AM039952_1332(AM039952|pid:none) Xanthomonas campestris pv. vesi... 58 2e-06
CR555306_3702(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 58 2e-06
CP001089_376(CP001089|pid:none) Geobacter lovleyi SZ, complete g... 58 2e-06
CP000563_1911(CP000563|pid:none) Shewanella baltica OS155, compl... 58 2e-06
CP000284_666(CP000284|pid:none) Methylobacillus flagellatus KT, ... 58 2e-06
(P40138) RecName: Full=Adenylate cyclase 2; EC=4.6.1.1;... 58 2e-06
CP001291_2884(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 57 3e-06
CP000507_67(CP000507|pid:none) Shewanella amazonensis SB2B, comp... 57 3e-06
CP000471_2254(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 57 3e-06
CP001344_2695(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 57 3e-06
CP000880_590(CP000880|pid:none) Salmonella enterica subsp. arizo... 57 3e-06
CP001124_375(CP001124|pid:none) Geobacter bemidjiensis Bem, comp... 57 3e-06
CR522870_1793(CR522870|pid:none) Desulfotalea psychrophila LSv54... 57 3e-06
CP001032_2159(CP001032|pid:none) Opitutus terrae PB90-1, complet... 57 3e-06
AE016796_353(AE016796|pid:none) Vibrio vulnificus CMCP6 chromoso... 57 3e-06
AP010904_2466(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 57 3e-06
FM178380_316(FM178380|pid:none) Aliivibrio salmonicida LFI1238 c... 57 3e-06
CT573071_1539(CT573071|pid:none) Kuenenia stuttgartiensis genome... 57 3e-06
CP001083_878(CP001083|pid:none) Clostridium botulinum Ba4 str. 6... 57 3e-06
CP000076_4553(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 57 3e-06
CP000383_2849(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 57 3e-06
CP001107_3400(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 57 3e-06
CP000478_2282(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 57 3e-06
CP000753_816(CP000753|pid:none) Shewanella baltica OS185, comple... 57 4e-06
CP000058_1121(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 57 4e-06
CP000447_2790(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 57 4e-06
CP001138_2248(CP001138|pid:none) Salmonella enterica subsp. ente... 57 4e-06
CP001111_1791(CP001111|pid:none) Stenotrophomonas maltophilia R5... 57 4e-06
CP000828_5915(CP000828|pid:none) Acaryochloris marina MBIC11017,... 57 4e-06
(Q54YZ9) RecName: Full=Hybrid signal transduction histidine kina... 57 4e-06
EU744213_1(EU744213|pid:none) Myxococcus fulvus HW-1 clone Tc012... 57 4e-06
CP001322_3893(CP001322|pid:none) Desulfatibacillum alkenivorans ... 57 4e-06
CP001252_834(CP001252|pid:none) Shewanella baltica OS223, comple... 57 4e-06
BX842646_273(BX842646|pid:none) Bdellovibrio bacteriovorus compl... 57 4e-06
CP000828_1886(CP000828|pid:none) Acaryochloris marina MBIC11017,... 57 4e-06
(P58662) RecName: Full=Sensor protein rcsC; EC=2.7.13.3... 57 4e-06
CP001389_1062(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 57 4e-06
CP000821_1646(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 57 4e-06
AI2195(AI2195) two-component hybrid sensor and regulator alr3120... 57 4e-06
CP001127_2334(CP001127|pid:none) Salmonella enterica subsp. ente... 57 4e-06
CP000563_3445(CP000563|pid:none) Shewanella baltica OS155, compl... 57 4e-06
AM933172_2247(AM933172|pid:none) Salmonella enterica subsp. ente... 57 4e-06
CP001344_1569(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 57 4e-06
CP000159_1193(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 57 4e-06
CP001144_2385(CP001144|pid:none) Salmonella enterica subsp. ente... 57 4e-06
CP001291_2812(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 57 5e-06
CP001133_395(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 57 5e-06
AM920689_3191(AM920689|pid:none) Xanthomonas campestris pv. camp... 57 5e-06
CP000828_1132(CP000828|pid:none) Acaryochloris marina MBIC11017,... 57 5e-06
CP000127_108(CP000127|pid:none) Nitrosococcus oceani ATCC 19707,... 57 5e-06
CP000471_2084(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 57 5e-06
CP000487_369(CP000487|pid:none) Campylobacter fetus subsp. fetus... 57 5e-06
CP001089_1966(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 57 5e-06
AC2062(AC2062) two-component response regulator alr2049 [importe... 57 5e-06
CP000821_1751(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 57 5e-06
CP000140_2659(CP000140|pid:none) Parabacteroides distasonis ATCC... 57 5e-06
CP000304_2386(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 57 5e-06
AB2196(AB2196) two-component hybrid sensor and regulator alr3121... 57 5e-06
CP000509_4258(CP000509|pid:none) Nocardioides sp. JS614, complet... 57 5e-06
AM236080_1738(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 57 5e-06
CP000463_360(CP000463|pid:none) Rhodopseudomonas palustris BisA5... 57 5e-06
CP000075_1098(CP000075|pid:none) Pseudomonas syringae pv. syring... 57 5e-06
AP009552_1755(AP009552|pid:none) Microcystis aeruginosa NIES-843... 57 5e-06
CP000133_3106(CP000133|pid:none) Rhizobium etli CFN 42, complete... 57 5e-06
CP000031_2969(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 57 5e-06
CP001013_3680(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 57 5e-06
CP000750_330(CP000750|pid:none) Kineococcus radiotolerans SRS302... 57 5e-06
CP000761_55(CP000761|pid:none) Ochrobactrum anthropi ATCC 49188 ... 57 5e-06
AE017285_2603(AE017285|pid:none) Desulfovibrio vulgaris subsp. v... 56 7e-06
CP000447_1037(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 56 7e-06
CP000083_4034(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 56 7e-06
CP000089_8(CP000089|pid:none) Dechloromonas aromatica RCB, compl... 56 7e-06
CP000444_3283(CP000444|pid:none) Shewanella sp. MR-7, complete g... 56 7e-06
CP001124_518(CP001124|pid:none) Geobacter bemidjiensis Bem, comp... 56 7e-06
EF601924_1(EF601924|pid:none) Proteus mirabilis strain P19 PhoP ... 56 7e-06
CP000607_1218(CP000607|pid:none) Chlorobium phaeovibrioides DSM ... 56 7e-06
CP000891_865(CP000891|pid:none) Shewanella baltica OS195, comple... 56 7e-06
AM942759_874(AM942759|pid:none) Proteus mirabilis strain HI4320,... 56 7e-06
CP000117_4672(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 56 7e-06
CP000270_2115(CP000270|pid:none) Burkholderia xenovorans LB400 c... 56 7e-06
CP000446_713(CP000446|pid:none) Shewanella sp. MR-4, complete ge... 56 7e-06
CU459003_3466(CU459003|pid:none) Magnetospirillum gryphiswaldens... 56 7e-06
CP000826_2006(CP000826|pid:none) Serratia proteamaculans 568, co... 56 7e-06
CU468135_1229(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 56 7e-06
CP000606_3193(CP000606|pid:none) Shewanella loihica PV-4, comple... 56 7e-06
AM746676_5578(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 56 7e-06
CP000353_1341(CP000353|pid:none) Ralstonia metallidurans CH34 me... 56 7e-06
CP001287_1750(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 56 7e-06
CP000822_529(CP000822|pid:none) Citrobacter koseri ATCC BAA-895,... 56 7e-06
AM412317_969(AM412317|pid:none) Clostridium botulinum A str. ATC... 56 7e-06
BX950851_1188(BX950851|pid:none) Erwinia carotovora subsp. atros... 56 7e-06
CP001097_167(CP001097|pid:none) Chlorobium limicola DSM 245, com... 56 7e-06
CR555306_412(CR555306|pid:none) Azoarcus sp. EbN1 complete genome. 56 7e-06
CP000478_2185(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 56 7e-06
CP000442_57(CP000442|pid:none) Burkholderia ambifaria AMMD chrom... 56 7e-06
CP000155_4053(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 56 7e-06
CP000142_1154(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 56 7e-06
AF197912_1(AF197912|pid:none) Azotobacter vinelandii histidine p... 56 9e-06
CP001106_435(CP001106|pid:none) Eubacterium eligens ATCC 27750 p... 56 9e-06
CP000239_2695(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 56 9e-06
AP010904_1321(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 56 9e-06
CP001089_3080(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 56 9e-06
CR522870_2721(CR522870|pid:none) Desulfotalea psychrophila LSv54... 56 9e-06
CP001087_1355(CP001087|pid:none) Desulfobacterium autotrophicum ... 56 9e-06
CP000300_755(CP000300|pid:none) Methanococcoides burtonii DSM 62... 56 9e-06
CP000481_2095(CP000481|pid:none) Acidothermus cellulolyticus 11B... 56 9e-06
AM456916_1(AM456916|pid:none) Vitis vinifera contig VV78X171121.... 56 9e-06
CP001052_1825(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 56 9e-06
CP000112_544(CP000112|pid:none) Desulfovibrio desulfuricans G20,... 56 9e-06
CP001078_1789(CP001078|pid:none) Clostridium botulinum E3 str. A... 56 9e-06
CP001655_2946(CP001655|pid:none) Dickeya zeae Ech1591, complete ... 56 9e-06
CP000509_1083(CP000509|pid:none) Nocardioides sp. JS614, complet... 56 9e-06
DQ897668_21(DQ897668|pid:none) Polyangium cellulosum strain So c... 56 9e-06
CP000686_198(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 56 9e-06
CP000388_2644(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 56 9e-06
CP000806_1136(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 56 9e-06
CP000361_774(CP000361|pid:none) Arcobacter butzleri RM4018, comp... 56 9e-06
CP001037_2423(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 56 9e-06
CP000644_2579(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 56 9e-06
CP001656_6073(CP001656|pid:none) Paenibacillus sp. JDR-2, comple... 56 9e-06
CP001349_6088(CP001349|pid:none) Methylobacterium nodulans ORS 2... 56 9e-06
CP000482_1412(CP000482|pid:none) Pelobacter propionicus DSM 2379... 56 9e-06
BX294138_248(BX294138|pid:none) Rhodopirellula baltica SH 1 comp... 56 9e-06
CP001027_849(CP001027|pid:none) Burkholderia ambifaria MC40-6 ch... 56 9e-06
CP000282_3642(CP000282|pid:none) Saccharophagus degradans 2-40, ... 55 1e-05
CP001037_1196(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 55 1e-05
M28242_1(M28242|pid:none) E.coli capsule synthesis regulators B ... 55 1e-05
CP001087_1867(CP001087|pid:none) Desulfobacterium autotrophicum ... 55 1e-05
AH1839(AH1839) two-component system, regulatory protein alr0264 ... 55 1e-05
CP000712_4014(CP000712|pid:none) Pseudomonas putida F1, complete... 55 1e-05
(P14376) RecName: Full=Sensor kinase protein rcsC; EC=2... 55 1e-05
CP000386_1251(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 55 1e-05
CU928158_890(CU928158|pid:none) Escherichia fergusonii ATCC 3546... 55 1e-05
AJ011832_1(AJ011832|pid:none) Yersinia enterocolitica (isolate 0... 55 1e-05
CP000716_1791(CP000716|pid:none) Thermosipho melanesiensis BI429... 55 1e-05
AP010904_4385(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 55 1e-05
CP000254_2604(CP000254|pid:none) Methanospirillum hungatei JF-1,... 55 1e-05
CP000141_2488(CP000141|pid:none) Carboxydothermus hydrogenoforma... 55 1e-05
CP000362_336(CP000362|pid:none) Roseobacter denitrificans OCh 11... 55 1e-05
CP000469_3397(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 55 1e-05
CP000606_458(CP000606|pid:none) Shewanella loihica PV-4, complet... 55 1e-05
CP000962_954(CP000962|pid:none) Clostridium botulinum A3 str. Lo... 55 1e-05
AE016877_885(AE016877|pid:none) Bacillus cereus ATCC 14579, comp... 55 1e-05
AE015451_1637(AE015451|pid:none) Pseudomonas putida KT2440 compl... 55 1e-05
CP000140_490(CP000140|pid:none) Parabacteroides distasonis ATCC ... 55 1e-05
CP001154_1011(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 55 1e-05
CP000943_2648(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 55 1e-05
BVECCC(H64991;JV0069;A48659)sensor protein rcsC (EC 2.7.3.-) - E... 55 1e-05
CP001581_2661(CP001581|pid:none) Clostridium botulinum A2 str. K... 55 1e-05
CP000884_5998(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 55 1e-05
AP006726_114(AP006726|pid:none) Klebsiella pneumoniae NTUH-K2044... 55 1e-05
AM946981_2104(AM946981|pid:none) Escherichia coli BL21, complete... 55 1e-05
CP000386_2599(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 55 1e-05
CP000471_296(CP000471|pid:none) Magnetococcus sp. MC-1, complete... 55 1e-05
AE008923_491(AE008923|pid:none) Xanthomonas axonopodis pv. citri... 55 1e-05
CP000681_3118(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 55 1e-05
AE016823_1394(AE016823|pid:none) Leptospira interrogans serovar ... 55 1e-05
CP000927_4453(CP000927|pid:none) Caulobacter sp. K31, complete g... 55 1e-05
CP000720_2725(CP000720|pid:none) Yersinia pseudotuberculosis IP ... 55 1e-05
AM260480_2064(AM260480|pid:none) Ralstonia eutropha H16 chromoso... 55 1e-05
AE017224_572(AE017224|pid:none) Brucella abortus biovar 1 str. 9... 55 1e-05
CP000668_2422(CP000668|pid:none) Yersinia pestis Pestoides F, co... 55 1e-05
CP000828_6202(CP000828|pid:none) Acaryochloris marina MBIC11017,... 55 1e-05
CP001048_1321(CP001048|pid:none) Yersinia pseudotuberculosis PB1... 55 1e-05
AP006725_3512(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 55 1e-05
CP000323_2461(CP000323|pid:none) Psychrobacter cryohalolentis K5... 55 1e-05
BX572593_318(BX572593|pid:none) Rhodopseudomonas palustris CGA00... 55 1e-05
CP001649_3254(CP001649|pid:none) Desulfovibrio salexigens DSM 26... 55 1e-05
AE010300_2540(AE010300|pid:none) Leptospira interrogans serovar ... 55 1e-05
AE017042_1710(AE017042|pid:none) Yersinia pestis biovar Microtus... 55 1e-05
FP236842_1287(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 55 1e-05
CP000950_2806(CP000950|pid:none) Yersinia pseudotuberculosis YPI... 55 1e-05
CP001096_317(CP001096|pid:none) Rhodopseudomonas palustris TIE-1... 55 1e-05
CP000089_347(CP000089|pid:none) Dechloromonas aromatica RCB, com... 55 1e-05
CR522870_883(CR522870|pid:none) Desulfotalea psychrophila LSv54 ... 55 1e-05
CP000510_895(CP000510|pid:none) Psychromonas ingrahamii 37, comp... 55 1e-05
CP000473_1725(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 55 1e-05
AE009952_1766(AE009952|pid:none) Yersinia pestis KIM, complete g... 55 1e-05
CP000250_3946(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 55 1e-05
AJ867583_1(AJ867583|pid:none) Emericella nidulans fphA gene for ... 55 1e-05
CP001097_1999(CP001097|pid:none) Chlorobium limicola DSM 245, co... 55 1e-05
CP000449_1272(CP000449|pid:none) Maricaulis maris MCS10, complet... 55 1e-05
AC3592(AC3592) response regulator protein [imported] - Brucella ... 55 1e-05
CP000230_2103(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 55 1e-05
CP000685_3897(CP000685|pid:none) Flavobacterium johnsoniae UW101... 55 1e-05
CP001622_50(CP001622|pid:none) Rhizobium leguminosarum bv. trifo... 55 1e-05
AD0149(AD0149) two component sensor kinase/response regulator pr... 55 1e-05
AY649416_1(AY649416|pid:none) Yersinia pseudotuberculosis strain... 55 1e-05
CP000901_1196(CP000901|pid:none) Yersinia pestis Angola, complet... 55 1e-05
AP009179_627(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic D... 55 1e-05
CP001287_1423(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 55 1e-05
BA000031_2567(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 55 1e-05
AM236080_413(AM236080|pid:none) Rhizobium leguminosarum bv. vici... 55 1e-05
CP001016_1922(CP001016|pid:none) Beijerinckia indica subsp. indi... 55 1e-05
EF415647_3(EF415647|pid:none) Pectobacterium carotovorum subsp. ... 55 2e-05
CR382139_952(CR382139|pid:none) Debaryomyces hansenii strain CBS... 55 2e-05
U15554_26(U15554|pid:none) Listeria monocytogenes strain DRDC8 h... 55 2e-05
AP010904_2920(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 55 2e-05
AJ489252_1(AJ489252|pid:none) Erwinia chrysanthemi phoP gene and... 55 2e-05
CP000155_1374(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 55 2e-05
CP000800_2402(CP000800|pid:none) Escherichia coli E24377A, compl... 55 2e-05
EU898570_1(EU898570|pid:none) Escherichia coli strain 493/89 sen... 55 2e-05
CP000802_2235(CP000802|pid:none) Escherichia coli HS, complete g... 55 2e-05
CP000089_3523(CP000089|pid:none) Dechloromonas aromatica RCB, co... 55 2e-05
AB206390_1(AB206390|pid:none) Zea mays ZmHK1a2 mRNA for histidin... 55 2e-05
CP001635_708(CP001635|pid:none) Variovorax paradoxus S110 chromo... 55 2e-05
CP000970_2295(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 55 2e-05
CP000851_285(CP000851|pid:none) Shewanella pealeana ATCC 700345,... 55 2e-05
CP001291_3675(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 55 2e-05
CP000117_2142(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 55 2e-05
AF121341_1(AF121341|pid:none) Rhizobium leguminosarum putative r... 55 2e-05
BA000022_1415(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 55 2e-05
AE008922_480(AE008922|pid:none) Xanthomonas campestris pv. campe... 55 2e-05
CP000038_2127(CP000038|pid:none) Shigella sonnei Ss046, complete... 55 2e-05
CP000034_797(CP000034|pid:none) Shigella dysenteriae Sd197, comp... 55 2e-05
CP000473_6940(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 55 2e-05
CP000961_4594(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 55 2e-05
AF246292_1(AF246292|pid:none) Pseudomonas fluorescens sensor kin... 55 2e-05
AP008208_2483(AP008208|pid:none) Oryza sativa (japonica cultivar... 55 2e-05
CP000127_1216(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 55 2e-05
CP000931_3753(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 55 2e-05
CP001013_2707(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 55 2e-05
AM743169_2080(AM743169|pid:none) Stenotrophomonas maltophilia K2... 55 2e-05
AP005112_4(AP005112|pid:none) Oryza sativa Japonica Group genomi... 55 2e-05
CP000113_1061(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 55 2e-05
CU928164_2341(CU928164|pid:none) Escherichia coli IAI39 chromoso... 55 2e-05
CU928163_2513(CU928163|pid:none) Escherichia coli UMN026 chromos... 55 2e-05
DQ897667_30(DQ897667|pid:none) Polyangium cellulosum strain So c... 55 2e-05
CP000749_2996(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 55 2e-05
CP001124_2005(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 55 2e-05
AE005174_3119(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 55 2e-05
AE005674_2302(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 55 2e-05
CP000721_2441(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 55 2e-05
CP001063_614(CP001063|pid:none) Shigella boydii CDC 3083-94, com... 55 2e-05
CP000568_799(CP000568|pid:none) Clostridium thermocellum ATCC 27... 55 2e-05
L30101_1(L30101|pid:none) Pseudomonas viridiflava pectate lyase ... 55 2e-05
BX950851_2423(BX950851|pid:none) Erwinia carotovora subsp. atros... 55 2e-05
FM178380_1012(FM178380|pid:none) Aliivibrio salmonicida LFI1238 ... 54 3e-05
EF157662_1(EF157662|pid:none) Clavispora lusitaniae histidine ki... 54 3e-05
CP000903_891(CP000903|pid:none) Bacillus weihenstephanensis KBAB... 54 3e-05
BA000004_271(BA000004|pid:none) Bacillus halodurans C-125 DNA, c... 54 3e-05
BX571966_2289(BX571966|pid:none) Burkholderia pseudomallei strai... 54 3e-05
D89625_1(D89625|pid:none) Anabaena sp. cyaC gene for adenylate c... 54 3e-05
CP000075_3697(CP000075|pid:none) Pseudomonas syringae pv. syring... 54 3e-05
CP000939_3348(CP000939|pid:none) Clostridium botulinum B1 str. O... 54 3e-05
BX294151_191(BX294151|pid:none) Rhodopirellula baltica SH 1 comp... 54 3e-05
CP001280_2417(CP001280|pid:none) Methylocella silvestris BL2, co... 54 3e-05
FM992694_247(FM992694|pid:none) Candida dubliniensis CD36 chromo... 54 3e-05
AC2863(AC2863) hypothetical protein Atu2332 [imported] - Agrobac... 54 3e-05
BX294027_4(BX294027|pid:none) Neurospora crassa DNA linkage grou... 54 3e-05
CP001028_139(CP001028|pid:none) Burkholderia ambifaria MC40-6 pl... 54 3e-05
CP000545_1259(CP000545|pid:none) Burkholderia mallei NCTC 10229 ... 54 3e-05
AY236957_2(AY236957|pid:none) Pseudomonas sp. PCL1171 response r... 54 3e-05
AM778947_82(AM778947|pid:none) Microcystis aeruginosa PCC 7806 g... 54 3e-05
CP001389_1061(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 54 3e-05
CP000927_2536(CP000927|pid:none) Caulobacter sp. K31, complete g... 54 3e-05
(P48027) RecName: Full=Sensor protein gacS; EC=2.7.13.3... 54 3e-05
CQ802951_1(CQ802951|pid:none) Sequence 69 from Patent EP1415996. 54 3e-05
AM920689_1836(AM920689|pid:none) Xanthomonas campestris pv. camp... 54 3e-05
CR382131_131(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 54 3e-05
BX548174_176(BX548174|pid:none) Prochlorococcus marinus MED4 com... 54 3e-05
CP000573_3014(CP000573|pid:none) Burkholderia pseudomallei 1106a... 54 3e-05
B97640(B97640)sensory transduction histidine kinase slr2098 [imp... 54 3e-05
>(Q54SP4) RecName: Full=Hybrid signal transduction histidine kinase D;
EC=2.7.13.3;
Length = 1546
Score = 302 bits (774), Expect = 4e-80
Identities = 154/154 (100%), Positives = 154/154 (100%)
Frame = +2
Query: 392 KANSNKNLLGGIQIMLVDDLEETTHLFSSMLYKLGAKRIDTFQRVSDAYAFLCDSSKPQP 571
KANSNKNLLGGIQIMLVDDLEETTHLFSSMLYKLGAKRIDTFQRVSDAYAFLCDSSKPQP
Sbjct: 1347 KANSNKNLLGGIQIMLVDDLEETTHLFSSMLYKLGAKRIDTFQRVSDAYAFLCDSSKPQP 1406
Query: 572 DIILSDLTMPFEDGYSMVRKLRDREKINTQNKKTPIIALTASVSSSDKEKVLKSGFDLHC 751
DIILSDLTMPFEDGYSMVRKLRDREKINTQNKKTPIIALTASVSSSDKEKVLKSGFDLHC
Sbjct: 1407 DIILSDLTMPFEDGYSMVRKLRDREKINTQNKKTPIIALTASVSSSDKEKVLKSGFDLHC 1466
Query: 752 SKPVNFLELSNSILTLIEKYNTTVNIDLIKEQEQ 853
SKPVNFLELSNSILTLIEKYNTTVNIDLIKEQEQ
Sbjct: 1467 SKPVNFLELSNSILTLIEKYNTTVNIDLIKEQEQ 1500
Score = 49.3 bits (116), Expect = 8e-04
Identities = 27/38 (71%), Positives = 27/38 (71%)
Frame = +2
Query: 2 KKINLEISQIPSTNLNPKLSLVIXXXXXXXXXXXSLLK 115
KKINLEISQIPSTNLNPKLSLVI SLLK
Sbjct: 1217 KKINLEISQIPSTNLNPKLSLVINNNNNNNNNNNSLLK 1254
Score = 43.5 bits (101), Expect = 0.045
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Frame = +2
Query: 401 SNKNLLGGIQIMLVDDLEETTHLFSSML--YKLGAKRIDTFQRVSDAYAFLCDSSKPQPD 574
S +N+ +++V+D E + +L Y D + + A PD
Sbjct: 562 SQENIHNKPIVLVVEDNPEMNRFIAELLSKYYFVVTAFDGVEGIEKTRAIT-------PD 614
Query: 575 IILSDLTMPFEDGYSMVRKLRDREKINTQNKKTPIIALTASVSSSDKEKVLKSGFDLHCS 754
+I++D MP G MV +LR E+ + PI+ LTA + + K+L++G + +
Sbjct: 615 LIVTDCMMPRMSGDEMVEQLRSDEQFDN----IPILLLTAKADENLRIKLLQNGVSDYVN 670
Query: 755 KPVNFLELSNSILTLI 802
KP + EL ++ L+
Sbjct: 671 KPFSSEELVARVVNLM 686
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 2,282,000,574
Number of extensions: 33135996
Number of successful extensions: 100046
Number of sequences better than 10.0: 6881
Number of HSP's gapped: 97408
Number of HSP's successfully gapped: 6940
Length of query: 971
Length of database: 1,061,185,681
Length adjustment: 139
Effective length of query: 832
Effective length of database: 606,871,409
Effective search space: 504917012288
Effective search space used: 504917012288
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
6 |
| VH (FL, L) |
2 |
| VF (FL, S) |
1 |
| AH (FL, L) |
3 |
| AF (FL, S) |
1 |
| SL (DIR, L) |
17 |
| SS (DIR, S) |
110 |
| SH (FL, L) |
23 |
| SF (FL, S) |
9 |
| CH (FL, L) |
7 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |