>Contig-U16372-1 (Contig-U16372-1Q) /CSM_Contig/Contig-U16372-1Q.Seq.d
ATTTTCATTTTCCCAAAATGAAACAAGATAAAATAAATGAAATTATAAAT
TATTTAAAATTTATTGAAGATAATAATTTTGAAAATACTAAACATAAAAA
TTATAAATTTTTACATGATGAGTAAATATTTTTCCTTACAATAACACAAT
CATTTTTTAAATTCTGACCAATAAAAAACAGAAACAGAAAAGAAAAATTA
TTTAGAATTGAAAAAAAAGTCATGAATTGTGGCGGAGATAGAAATATATC
AAAAGAAGTGTGTTTAGAAGTAATTAATGATTATAGAATGGTATCACTCT
GGGAAGAAATGCATAAAGGTCATATAGGAAGAGATGCAACCTATGGGAAC
TACAAGACTAAATATTATAATATGGGATTGTATTCTTTTGTATCTGATGC
AGTAGATACGTGTGACATTTGCCAACGAAATAGAATAAAAGGTATAACAA
AGGATTTTGCTCCAATTGTAGATACCGAGGAATACTCAAGATTGGTTTAT
GATTTAACATCAATTAAAGGTGAACATAAAGAAAAAGTTACATACGATGA
TGATAATGAAAAGATACTAACTAAACTAGATGATCTTATCCAATATGACT
CTGTACAACCGTACGACACCGATGTTGTTTACATTATTCTATGCATAGAT
TCTTTTACAAAATTTGCTACTGGAAGGTATTTATTTTTTATTTATTAATT
TATTAGTTTTCTTTTTTTATTTTAATTATCATTTATTTTTTAGATGTTTG
ACAACAAAGAGAACAGTTCCCATATACAATTTTTTGGCTCTCACGTACTT
TGGCAAACCTGTGAAAGTATGGCACTGCGATAATGGACGTGAATTTAAAA
ACAAAGTCCAAAAAGAATTCCTAAAACTTTTTCCAGGCTCCAAGTCAGCA
CATGGAGCTCCTCGTACACCAACAACTCAAGGTATGGTAGAAAGATTGAA
TCGAACTATCAAGGAGAGGATCTCAAAATTAAAACAACAAGAGTATGATA
TTGTGAACAATATAAATTATCGATATGTTTATTAATTAATCATTTATAAA
TAAATTTTAGTTTTCTTGATGGTACTTCTAGGTCTCTTTCTGAACTATTA
AAACAAGCTTTGTATGATTACAATAATACAAAAACAAGAACAATTAAAAT
GACACCATCTCAAGCTGTTGGTATTGTACCTTTGTTTATTAATGTGCAAT
CAGAACAAGACTCTCAATCAATTGGTGTTTCAGATGTTTCAAAAGAAGAA
ATAACAGCTATTATTCTTGAAAATCTCACAAGTTACCAAAATCAATGGAA
TTCAAAACCACCAAAGGGATTGAAAGTTGGTGATACTGTACTCTTTCTAG
AAATTAAAAAAAATAATAAAATATTGATTTTGTGTAAAATTCATAAGGTA
ATACAGGAAGACACTAAACAACTTTATAAACTTGAATTTTTGGAAGATGG
AATCAATAGCCTTCAAAAAAAAGGTTTATACTCTGGTTTTGTAGGAGGTA
ACAAGTTGGTTCTTTATAAACAATCAACAGTTGATATTTTTAGAACATCG
GCCAAACATACAAAAAGATATTGATTCTTTTACTTCTGGTCTTTATTTAA
ATAATGATGGGAAAGTTATTGAATTTCTGGTTCAGTTTATTAAAAATCTT
GGTAAGGATTTATCCAATTTCAACTTGCATCAATTGGTAACACAAAATGA
TCCATTTAGGGTTTTGGAAGATGCTCTTAACAATCCATCAAATATTCCAC
CTATCATTAACGATAATCCATTTCAACACAAACTCAATAATGAAATGGAA
CAAGAAGAAATACTCCCATTTTTAAATAATAATCCAACAGCGCCAAATTT
AATGAATTGTTTGAGACAGGATATGAATTTAAAAGAAATAGTACCACCAA
TACCTCAAGTGCAAATAATACCATCATATACTATACCACAATCTGGTAGT
GGTATAGTAACAACTGTTAAACGTCTCAGAGGCCGTCCTCATAAGATACC
AATTGTTAATAAACCTCCTTTAAAATCACATTCTAAACCATCCAAATCAC
CTCTCAAATCACCTCTCAAATCACCATCCAAATCACCTCTCAAATCACCA
TCCATTTCACCTTCCAATTCACCATTTAAATCATCACCATTTAAATCACC
TTCCAAATCACCATTTAAATCACCTTCCAAATCACCATCCATTTCACCTT
CCAATTCACCATTTAAATCACCATTTAAATCACCTTCCAATTCACCATTT
AAATCACCATTTAAATCACCTTCCAAATCACCATCAATAGGAAAAATCGT
TAATGTGATACCTTCAAAAAAAGTTGCAAAAACAAAGTTAACAAGGACAC
AAAAATTAGAACTTGATTTGGTTGCAATTAATAGAAGGGGGTATGGGGAA
ATTAGAAAATAAAAACAAGTGGCCAAATCAAAAAAACAAAAAAAACACAA
ATCAACACAAAAAATTAAAAAAAAAAAAAAAAATTAAAAATTAA

est1=AFA221F,-358,109
est2=AFO190F,-206,405
est3=AHH245F,-205,410
est4=AFO420F,-203,416
est5=AHA706F,-203,409
est6=AHR206F,-203,364
est7=AHR493F,-203,407
est8=AHQ286F,-202,407
est9=AFA721F,-199,429
est10=AFH343F,-199,397
est11=AHP690F,-198,404
est12=AFB702F,-197,363
est13=AFE335F,-197,334
est14=AFF417F,-197,418
est15=AFF448F,-197,417
est16=AHC106F,-197,410
est17=AHD628F,-197,408
est18=AHG491F,-197,408
est19=AHJ106F,-197,406
est20=AHJ458F,-197,422
est21=AHQ522F,-197,386
est22=AFH495F,-196,431
est23=AHJ167F,-196,402
est24=AHL284F,-196,405
est25=AFG249F,-194,404
est26=AFK378F,-191,430
est27=AHD616F,-189,430
est28=AHL662F,-184,402
est29=AHR182F,-184,404
est30=AHI360F,-141,421
est31=SFB673F,-72,452
est32=AFO788F,-64,555
est33=AHP359F,-62,224
est34=AFA477F,-59,424
est35=SHD234F,-59,611
est36=AFB538F,-47,524
est37=AFC373F,-45,158
est38=AFF133F,-45,551
est39=AHO242F,-45,599
est40=AFJ150F,-39,553
est41=AFC683F,-37,500
est42=AFO751F,-37,625
est43=AFI875F,1,616
est44=AHI689F,1,412
est45=SSG328F,1,420
est46=AHM128F,2,456
est47=AHJ566F,6,618
est48=CHK411F,7,615
est49=AHP290F,14,426
est50=AHO338F,20,635
est51=SHC856F,26,615
est52=AHL536F,28,628
est53=AHM342F,39,556
est54=AHJ796F,42,619
est55=SHF139F,44,628
est56=SHE272F,48,479
est57=AHD878F,51,704
est58=AHI760F,51,718
est59=AHF760F,55,628
est60=AHP580F,62,508
est61=SSM233E,63,498
est62=AHP538F,68,552
est63=AFH485F,78,700
est64=SHG436F,97,741
est65=AHC474F,103,456
est66=SHD830F,178,298
est67=AHG180F,321,832
est68=AHB229F,430,1037
est69=SHI328F,489,591
est70=VSC844E,533,964
est71=SSC174Z,537,1072
est72=CHQ517F,658,1264
est73=VHG321F,666,1351
est74=AFA463Z,683,1136
est75=AFK768F,964,1466
est76=AFB747F,1057,1621
est77=CHC489Z,1278,1835
est78=AFI875Z,1517,2161
est79=AFB702Z,1533,2228
est80=AHQ522Z,1591,2457
est81=AHL284Z,1647,2352
est82=VHC812Z,1648,2436
est83=VHE595Z,1652,2303
est84=AHM342Z,1653,2457
est85=AHC596Z,1654,2445
est86=VHP732Z,1656,2395
est87=AHJ167Z,1659,2458
est88=AHC106Z,1661,2420
est89=AHH245Z,1661,2458
est90=AFO751Z,1662,2456
est91=AHJ566Z,1662,2458
est92=VHQ196Z,1662,2436
est93=VHP322Z,1663,2436
est94=AHQ286Z,1666,2400
est95=AFK768Z,1675,2415
est96=AFO190Z,1677,2414
est97=SHD234Z,1695,2209
est98=AHD628Z,1697,2297
est99=CHF724Z,1703,2253
est100=CHS453Z,1718,2355
est101=AFH495Z,1721,2408
est102=AHG491Z,1727,2415
est103=VHA379Z,1727,2437
est104=AHB229Z,1729,2343
est105=CHO813Z,1729,2459
est106=SFE560Z,1729,2435
est107=VHK878Z,1730,2340
est108=AHJ106Z,1731,2458
est109=AHR206Z,1731,2421
est110=AHR493Z,1731,2494
est111=AHA706Z,1732,2458
est112=AHJ458Z,1733,2494
est113=AFO788Z,1734,2414
est114=SLB252Z,1751,2468
est115=CHO545Z,1752,2363
est116=AHL662Z,1754,2494
est117=VHJ234Z,1760,2308
est118=VHK362Z,1760,2312
est119=AHP290Z,1766,2398
est120=AFF133Z,1772,2457
est121=CHG428Z,1781,2235
est122=AHI360Z,1782,2238
est123=AHP359Z,1788,2458
est124=CFE378Z,1790,2107
est125=AHP538Z,1806,2457
est126=CHK411Z,1836,2219
est127=AFH343Z,1840,2456
est128=VFN845Z,1845,2348
est129=AHP690Z,1894,2305
est130=SFF392Z,1908,2434
est131=VHG545Z,1916,2234
est132=VFL688Z,1928,2317
est133=VHF539Z,1932,2259
est134=AFC683Z,1933,2444
est135=VHE625Z,1933,2303
est136=AHO447Z,1936,2256
est137=AFB538Z,1937,2458
est138=SLI455Z,1953,2442
est139=VHA123Z,1984,2257
est140=VHJ623Z,1985,2234
est141=SFF404Z,2007,2436
est142=AFE335Z,2011,2363
est143=AFJ150Z,2025,2456
est144=AFH485Z,2027,2411
est145=SFE592F,2039,2440
est146=CFB834Z,2041,2323
est147=SFB673Z,2071,2394
est148=AFF448Z,2075,2448
est149=AFA221Z,2093,2457
est150=AFA721Z,2098,2446
est151=AFA463F,2103,2433
est152=AFK378Z,2110,2436
est153=AHD616Z,2120,2297
est154=AFA477Z,2122,2457
est155=AFB747Z,2123,2343
est156=AFF417Z,2147,2308
est157=SFC810F,2228,2383
est158=AFC373Z,2267,2457

ififpk*nkik*mkl*ii*nllkiiilkilnikiinfymmskyfslq*hnhflnsdq*kt
etekknylelkkks*ivaeieiyqkkcv*k*lmiiewyhsgkkcikvi*eemqpmgttrl
niiiwdcillylmq*irvtfaneie*kv*qrillql*iprntqdwfmi*hqlkvnikkkl
htmmimkry*ln*milsnmtlynrttpmlftlfya*illqnlllegiyflfinllvfffy
fnyhlffrclttkrtvpiynflaltyfgkpvkvwhcdngrefknkvqkeflklfpgsksa
hgaprtpttqgmverlnrtikerisklkqqeydivnninyryvy*liiyk*ilvflmvll
glflny*nklcmitiiqkqeqlk*hhlkllvlylcllmcnqnktlnqlvfqmfqkkk*ql
lflkisqvtkingiqnhqrd*klvilysf*klkkiiky*fcvkfir*yrktlnnfinlnf
wkmesiafkkkvytlvl*EVTSWFFINNQQLIFLEHRPNIQKDIDSFTSGLYLNNDGKVI
EFLVQFIKNLGKDLSNFNLHQLVTQNDPFRVLEDALNNPSNIPPIINDNPFQHKLNNEME
QEEILPFLNNNPTAPNLMNCLRQDMNLKEIVPPIPQVQIIPSYTIPQSGSGIVTTVKRLR
GRPHKIPIVNKPPLKSHSKPSKSPLKSPLKSPSKSPLKSPSISPSNSPFKSSPFKSPSKS
PFKSPSKSPSISPSNSPFKSPFKSPSNSPFKSPFKSPSKSPSIGKIVNVIPSKKVAKTKL
TRTQKLELDLVAINRRGYGEIRK*kqvakskkqkkhkstqkikkkkkn*kl

Frame A:
ififpk*nkik*mkl*ii*nllkiiilkilnikiinfymmskyfslq*hnhflnsdq*kt
etekknylelkkks*ivaeieiyqkkcv*k*lmiiewyhsgkkcikvi*eemqpmgttrl
niiiwdcillylmq*irvtfaneie*kv*qrillql*iprntqdwfmi*hqlkvnikkkl
htmmimkry*ln*milsnmtlynrttpmlftlfya*illqnlllegiyflfinllvfffy
fnyhlffrclttkrtvpiynflaltyfgkpvkvwhcdngrefknkvqkeflklfpgsksa
hgaprtpttqgmverlnrtikerisklkqqeydivnninyryvy*liiyk*ilvflmvll
glflny*nklcmitiiqkqeqlk*hhlkllvlylcllmcnqnktlnqlvfqmfqkkk*ql
lflkisqvtkingiqnhqrd*klvilysf*klkkiiky*fcvkfir*yrktlnnfinlnf
wkmesiafkkkvytlvl*EVTSWFFINNQQLIFLEHRPNIQKDIDSFTSGLYLNNDGKVI
EFLVQFIKNLGKDLSNFNLHQLVTQNDPFRVLEDALNNPSNIPPIINDNPFQHKLNNEME
QEEILPFLNNNPTAPNLMNCLRQDMNLKEIVPPIPQVQIIPSYTIPQSGSGIVTTVKRLR
GRPHKIPIVNKPPLKSHSKPSKSPLKSPLKSPSKSPLKSPSISPSNSPFKSSPFKSPSKS
PFKSPSKSPSISPSNSPFKSPFKSPSNSPFKSPFKSPSKSPSIGKIVNVIPSKKVAKTKL
TRTQKLELDLVAINRRGYGEIRK*kqvakskkqkkhkstqkikkkkkn*kl


Frame B:
fsfsqnetr*nk*nyklfkiy*r**f*ky*t*kl*ift**vnifpynntiif*iltnkkq
kqkrkii*n*kkshelwrr*kyikrsvfrsn**l*ngitlgrna*rsyrkrcnlwelqd*
il*ygivffci*csryv*hlptk*nkrynkgfcsncryrgilkigl*fnin*r*t*rksy
ir****kdtn*tr*sypi*lcttvrhrcclhysmhrffykicywkvfifylliy*fsffi
liiiyfldv*qqreqfpytifwlsrtlanl*kygtaimdvnlktkskkns*nffqapsqh
mellvhqqlkvw*kd*ielsrrgsqn*nnksmil*ti*iidmfin*sfinkf*fs*wyf*
vsf*tiktsfv*lq*yknknn*ndtisscwyctfvy*cairtrlsinwcfrcfkrrnnsy
ys*kshklpksmefkttkgiesw*yctlsrn*kk**nidfv*ns*gntgrh*ttl*t*if
grwnq*pskkrfilwfcrr*qvgsl*tins*yf*nigqtykkilillllvfi*immgkll
nfwfsllkilvriypistcinw*hkmihlgfwkmlltihqifhlsltiihfntnsimkwn
kkkyshf*iiiqqrqi**iv*dri*i*kk*yhqylkck*yhhilyhnlvvv**qllnvse
avliryqllinll*nhilnhpnhlsnhlsnhhpnhlsnhhpfhlpihhlnhhhlnhlpnh
hlnhlpnhhpfhlpihhlnhhlnhlpihhlnhhlnhlpnhhq*ekslm*ylqkklqkqs*
qghkn*nliwlqlieggmgklenknkwpnqknkkntnqhkklkkkkkikn*


Frame C:
fhfpkmkqdkineiinylkfiednnfentkhknykflhde*iffltitqsffkf*piknr
nrkeklfriekkvmncggdrniskevclevindyrmvslweemhkghigrdatygnyktk
yynmglysfvsdavdtcdicqrnrikgitkdfapivdteeysrlvydltsikgehkekvt
ydddnekiltklddliqydsvqpydtdvvyiilcidsftkfatgrylffiy*fisflflf
*lsfif*mfdnkensshiqffgshvlwqtcesmalr*wt*i*kqspkripktfsrlqvst
wsssytnnsrygrkiesnyqgedlkikttrv*yceqyklsicllinhl*infsfldgtsr
slsellkqalydynntktrtikmtpsqavgivplfinvqseqdsqsigvsdvskeeitai
ilenltsyqnqwnskppkglkvgdtvlfleikknnkililckihkviqedtkqlyklefl
edginslqkkglysgfvggnklvlykqstvdifrtsakhtkry*ffyfwslfk**wesy*
isgsvy*ksw*gfiqfqlasigntk*si*gfgrcs*qsikystyh*r*sistqtq**ngt
rrntpifk**snsakfnelfetgyefkrnsttntssanntiiyyttiw*wysnnc*tsqr
pss*dtnc**tsfkitf*tiqitsqitsqitiqitsqitihftfqfti*iiti*itfqit
i*itfqitihftfqfti*iti*itfqfti*iti*itfqitinrknr*cdtfkkscknkvn
kdtkirt*fgcn**kgvwgn*kiktsgqikktkktqintkn*kkkkklki

Query= Contig-U16372-1 (Contig-U16372-1Q)
/CSM_Contig/Contig-U16372-1Q.Seq.d
         (2494 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U16372-1 (Contig-U16372-1Q) /CSM_Contig/Conti...  3207  0.0
Contig-U16442-1 (Contig-U16442-1Q) /CSM_Contig/Conti...   880  0.0
Contig-U13513-1 (Contig-U13513-1Q) /CSM_Contig/Conti...   765  0.0
Contig-U11413-1 (Contig-U11413-1Q) /CSM_Contig/Conti...    52  4e-06
Contig-U09766-1 (Contig-U09766-1Q) /CSM_Contig/Conti...    42  0.004
Contig-U15741-1 (Contig-U15741-1Q) /CSM_Contig/Conti...    40  0.016
Contig-U15536-1 (Contig-U15536-1Q) /CSM_Contig/Conti...    40  0.016
Contig-U12559-1 (Contig-U12559-1Q) /CSM_Contig/Conti...    40  0.016
Contig-U09534-1 (Contig-U09534-1Q) /CSM_Contig/Conti...    40  0.016
Contig-U12738-1 (Contig-U12738-1Q) /CSM_Contig/Conti...    38  0.064

>Contig-U16372-1 (Contig-U16372-1Q) /CSM_Contig/Contig-U16372-1Q.Seq.d
          Length = 2494

 Score = 3207 bits (1618), Expect = 0.0
 Identities = 1664/1687 (98%)
 Strand = Plus / Plus

                                                                        
Query: 743  gatgtttgacaacaaagagaacagttcccatatacaattttttggctctcacgtactttg 802
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743  gatgtttgacaacaaagagaacagttcccatatacaattttttggctctcacgtactttg 802

                                                                        
Query: 803  gcaaacctgtgaaagtatggcactgcgataatggacgtgaatttaaaaacaaagtccaaa 862
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803  gcaaacctgtgaaagtatggcactgcgataatggacgtgaatttaaaaacaaagtccaaa 862

                                                                        
Query: 863  aagaattcctaaaactttttccaggctccaagtcagcacatggagctcctcgtacaccaa 922
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863  aagaattcctaaaactttttccaggctccaagtcagcacatggagctcctcgtacaccaa 922

                                                                        
Query: 923  caactcaaggtatggtagaaagattgaatcgaactatcaaggagaggatctcaaaattaa 982
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923  caactcaaggtatggtagaaagattgaatcgaactatcaaggagaggatctcaaaattaa 982

                                                                        
Query: 983  aacaacaagagtatgatattgtgaacaatataaattatcgatatgtttattaattaatca 1042
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983  aacaacaagagtatgatattgtgaacaatataaattatcgatatgtttattaattaatca 1042

                                                                        
Query: 1043 tttataaataaattttagttttcttgatggtacttctaggtctctttctgaactattaaa 1102
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 tttataaataaattttagttttcttgatggtacttctaggtctctttctgaactattaaa 1102

                                                                        
Query: 1103 acaagctttgtatgattacaataatacaaaaacaagaacaattaaaatgacaccatctca 1162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 acaagctttgtatgattacaataatacaaaaacaagaacaattaaaatgacaccatctca 1162

                                                                        
Query: 1163 agctgttggtattgtacctttgtttattaatgtgcaatcagaacaagactctcaatcaat 1222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 agctgttggtattgtacctttgtttattaatgtgcaatcagaacaagactctcaatcaat 1222

                                                                        
Query: 1223 tggtgtttcagatgtttcaaaagaagaaataacagctattattcttgaaaatctcacaag 1282
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1223 tggtgtttcagatgtttcaaaagaagaaataacagctattattcttgaaaatctcacaag 1282

                                                                        
Query: 1283 ttaccaaaatcaatggaattcaaaaccaccaaagggattgaaagttggtgatactgtact 1342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1283 ttaccaaaatcaatggaattcaaaaccaccaaagggattgaaagttggtgatactgtact 1342

                                                                        
Query: 1343 ctttctagaaattnnnnnnnntaataaaatattgattttgtgtaaaattcataaggtaat 1402
            |||||||||||||        |||||||||||||||||||||||||||||||||||||||
Sbjct: 1343 ctttctagaaattaaaaaaaataataaaatattgattttgtgtaaaattcataaggtaat 1402

                                                                        
Query: 1403 acaggaagacactaaacaactttataaacttgaatttttggaagatggaatcaatagcct 1462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1403 acaggaagacactaaacaactttataaacttgaatttttggaagatggaatcaatagcct 1462

                                                                        
Query: 1463 tcnnnnnnnnggtttatactctggttttgtaggaggtaacaagttggttctttataaaca 1522
            ||        ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1463 tcaaaaaaaaggtttatactctggttttgtaggaggtaacaagttggttctttataaaca 1522

                                                                        
Query: 1523 atcaacagttgatatttttagaacatcggccaaacatacaaaaagatattgattctttta 1582
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1523 atcaacagttgatatttttagaacatcggccaaacatacaaaaagatattgattctttta 1582

                                                                        
Query: 1583 cttctggtctttatttaaataatgatgggaaagttattgaatttctggttcagtttatta 1642
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1583 cttctggtctttatttaaataatgatgggaaagttattgaatttctggttcagtttatta 1642

                                                                        
Query: 1643 aaaatcttggtaaggatttatccaatttcaacttgcatcaattggtaacacaaaatgatc 1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1643 aaaatcttggtaaggatttatccaatttcaacttgcatcaattggtaacacaaaatgatc 1702

                                                                        
Query: 1703 catttagggttttggaagatgctcttaacaatccatcaaatattccacctatcattaacg 1762
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1703 catttagggttttggaagatgctcttaacaatccatcaaatattccacctatcattaacg 1762

                                                                        
Query: 1763 ataatccatttcaacacaaactcaataatgaaatggaacaagaagaaatactcccatttt 1822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1763 ataatccatttcaacacaaactcaataatgaaatggaacaagaagaaatactcccatttt 1822

                                                                        
Query: 1823 taaataataatccaacagcgccaaatttaatgaattgtttgagacaggatatgaatttaa 1882
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1823 taaataataatccaacagcgccaaatttaatgaattgtttgagacaggatatgaatttaa 1882

                                                                        
Query: 1883 aagaaatagtaccaccaatacctcaagtgcaaataataccatcatatactataccacaat 1942
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1883 aagaaatagtaccaccaatacctcaagtgcaaataataccatcatatactataccacaat 1942

                                                                        
Query: 1943 ctggtagtggtatagtaacaactgttaaacgtctcagaggccgtcctcataagataccaa 2002
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1943 ctggtagtggtatagtaacaactgttaaacgtctcagaggccgtcctcataagataccaa 2002

                                                                        
Query: 2003 ttgttaataaacctcctttaaaatcacattctaaaccatccaaatcacctctcaaatcac 2062
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2003 ttgttaataaacctcctttaaaatcacattctaaaccatccaaatcacctctcaaatcac 2062

                                                                        
Query: 2063 ctctcaaatcaccatccaaatcacctctcaaatcaccatccatttcaccttccaattcac 2122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2063 ctctcaaatcaccatccaaatcacctctcaaatcaccatccatttcaccttccaattcac 2122

                                                                        
Query: 2123 catttaaatcatcaccatttaaatcaccttccaaatcaccatttaaatcaccttccaaat 2182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2123 catttaaatcatcaccatttaaatcaccttccaaatcaccatttaaatcaccttccaaat 2182

                                                                        
Query: 2183 caccatccatttcaccttccaattcaccatttaaatcaccatttaaatcaccttccaatt 2242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2183 caccatccatttcaccttccaattcaccatttaaatcaccatttaaatcaccttccaatt 2242

                                                                        
Query: 2243 caccatttaaatcaccatttaaatcaccttccaaatcaccatcaataggaaaaatcgtta 2302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2243 caccatttaaatcaccatttaaatcaccttccaaatcaccatcaataggaaaaatcgtta 2302

                                                                        
Query: 2303 atgtgataccttcnnnnnnngttgcaaaaacaaagttaacaaggacacaaaaattagaac 2362
            |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2303 atgtgataccttcaaaaaaagttgcaaaaacaaagttaacaaggacacaaaaattagaac 2362

                                                                        
Query: 2363 ttgatttggttgcaattaatagaagggggtatggggaaattagaaaataaaaacaagtgg 2422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2363 ttgatttggttgcaattaatagaagggggtatggggaaattagaaaataaaaacaagtgg 2422

                   
Query: 2423 ccaaatc 2429
            |||||||
Sbjct: 2423 ccaaatc 2429


 Score =  910 bits (459), Expect = 0.0
 Identities = 459/459 (100%)
 Strand = Plus / Plus

                                                                       
Query: 219 gtcatgaattgtggcggagatagaaatatatcaaaagaagtgtgtttagaagtaattaat 278
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gtcatgaattgtggcggagatagaaatatatcaaaagaagtgtgtttagaagtaattaat 278

                                                                       
Query: 279 gattatagaatggtatcactctgggaagaaatgcataaaggtcatataggaagagatgca 338
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gattatagaatggtatcactctgggaagaaatgcataaaggtcatataggaagagatgca 338

                                                                       
Query: 339 acctatgggaactacaagactaaatattataatatgggattgtattcttttgtatctgat 398
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 acctatgggaactacaagactaaatattataatatgggattgtattcttttgtatctgat 398

                                                                       
Query: 399 gcagtagatacgtgtgacatttgccaacgaaatagaataaaaggtataacaaaggatttt 458
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gcagtagatacgtgtgacatttgccaacgaaatagaataaaaggtataacaaaggatttt 458

                                                                       
Query: 459 gctccaattgtagataccgaggaatactcaagattggtttatgatttaacatcaattaaa 518
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gctccaattgtagataccgaggaatactcaagattggtttatgatttaacatcaattaaa 518

                                                                       
Query: 519 ggtgaacataaagaaaaagttacatacgatgatgataatgaaaagatactaactaaacta 578
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggtgaacataaagaaaaagttacatacgatgatgataatgaaaagatactaactaaacta 578

                                                                       
Query: 579 gatgatcttatccaatatgactctgtacaaccgtacgacaccgatgttgtttacattatt 638
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gatgatcttatccaatatgactctgtacaaccgtacgacaccgatgttgtttacattatt 638

                                                  
Query: 639 ctatgcatagattcttttacaaaatttgctactggaagg 677
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ctatgcatagattcttttacaaaatttgctactggaagg 677


 Score =  341 bits (172), Expect = 3e-93
 Identities = 172/172 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   attttcattttcccaaaatgaaacaagataaaataaatgaaattataaattatttaaaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   attttcattttcccaaaatgaaacaagataaaataaatgaaattataaattatttaaaat 60

                                                                       
Query: 61  ttattgaagataataattttgaaaatactaaacataaaaattataaatttttacatgatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttattgaagataataattttgaaaatactaaacataaaaattataaatttttacatgatg 120

                                                               
Query: 121 agtaaatatttttccttacaataacacaatcattttttaaattctgaccaat 172
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtaaatatttttccttacaataacacaatcattttttaaattctgaccaat 172


>Contig-U16442-1 (Contig-U16442-1Q) /CSM_Contig/Contig-U16442-1Q.Seq.d
          Length = 1598

 Score =  880 bits (444), Expect = 0.0
 Identities = 458/460 (99%), Gaps = 2/460 (0%)
 Strand = Plus / Plus

                                                                       
Query: 219 gtcatgaattgtggcggagatagaaatatatcaaaagaagtgtgtttagaagtaattaat 278
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gtcatgaattgtggcggagatagaaatatatcaaaagaagtgtgtttagaagtaattaat 218

                                                                       
Query: 279 gattatagaatggtatcactctgggaagaaatgcataaaggtcatataggaagagatgca 338
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gattatagaatggtatcactctgggaagaaatgcataaaggtcatataggaagagatgca 278

                                                                       
Query: 339 acctatgggaactacaagactaaatattataatatgggattgtattcttttgtatctgat 398
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 acctatgggaactacaagactaaatattataatatgggattgtattcttttgtatctgat 338

                                                                       
Query: 399 gcagtagatacgtgtgacatttgccaacgaaatagaataaaaggtataacaaaggatttt 458
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gcagtagatacgtgtgacatttgccaacgaaatagaataaaaggtataacaaaggatttt 398

                                                                       
Query: 459 gctccaattgtagataccgaggaatactcaagattggtttatgatttaacatcaattaaa 518
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gctccaattgtagataccgaggaatactcaagattggtttatgatttaacatcaattaaa 458

                                                                       
Query: 519 ggtgaacataaagaaaaagttacatacgatgatgataatgaaaagatactaactaaacta 578
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ggtgaacataaagaaaaagttacatacgatgatgataatgaaaagatactaactaaacta 518

                                                                       
Query: 579 gatgatcttatccaatatgactctgtacaa-ccgtacgaca-ccgatgttgtttacatta 636
           |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 519 gatgatcttatccaatatgactctgtacaacccgtacgacacccgatgttgtttacatta 578

                                                   
Query: 637 ttctatgcatagattcttttacaaaatttgctactggaag 676
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ttctatgcatagattcttttacaaaatttgctactggaag 618


 Score =  628 bits (317), Expect = e-180
 Identities = 340/349 (97%), Gaps = 1/349 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1368 aaaatattgattttgtgtaaaattcataaggtaatacaggaagacactaaacaactttat 1427
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 aaaatattgattttgtgtaaaattcataaggtaatacaggaagacactaaacaactttat 1310

                                                                        
Query: 1428 aaacttgaatttttggaagatggaatcaatagccttcnnnnnnnnggtttatactctggt 1487
            |||||||||||||||||||||||||||||||||||||        |||||||||||||||
Sbjct: 1311 aaacttgaatttttggaagatggaatcaatagccttcaaaaaaaaggtttatactctggt 1370

                                                                        
Query: 1488 tttgtaggaggtaacaagttggttctttataaacaatcaacagttgatatttttagaaca 1547
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1371 tttgtaggaggtaacaagttggttctttataaacaatcaacagttgatatttttagaaca 1430

                                                                        
Query: 1548 tcggccaaacatacaaaaagatattgattcttttacttctggtctttatttaaataatga 1607
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1431 tcg-ccaaacatacaaaaagatattgattcttttacttctggtctttatttaaataatga 1489

                                                                        
Query: 1608 tgggaaagttattgaatttctggttcagtttattaaaaatcttggtaaggatttatccaa 1667
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1490 tgggaaagttattgaatttctggttcagtttattaaaaatcttggtaaggatttatccaa 1549

                                                             
Query: 1668 tttcaacttgcatcaattggtaacacaaaatgatccatttagggttttg 1716
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1550 tttcaacttgcatcaattggtaacacaaaatgatccatttagggttttg 1598


 Score =  553 bits (279), Expect = e-157
 Identities = 291/295 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1061 ttttcttgatggtacttctaggtctctttctgaactattaaaacaagctttgtatgatta 1120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868  ttttcttgatggtacttctaggtctctttctgaactattaaaacaagctttgtatgatta 927

                                                                        
Query: 1121 caataatacaaaaacaagaacaattaaaatgacaccatctcaagctgttggtattgtacc 1180
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 928  caataatacaaaaacaagaacaattaaaatgaaaccatctcaagctgttggtattgttcc 987

                                                                        
Query: 1181 tttgtttattaatgtgcaatcagaacaagactctcaatcaattggtgtttcagatgtttc 1240
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988  tttgtttattaatgttcaatcagaacaagactctcaatcaattggtgtttcagatgtttc 1047

                                                                        
Query: 1241 aaaagaagaaataacagctattattcttgaaaatctcacaagttaccaaaatcaatggaa 1300
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 aaaagaagaaagaacagctattattcttgaaaatctcacaagttaccaaaatcaatggaa 1107

                                                                   
Query: 1301 ttcaaaaccaccaaagggattgaaagttggtgatactgtactctttctagaaatt 1355
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 ttcaaaaccaccaaagggattgaaagttggtgatactgtactctttctagaaatt 1162


 Score =  488 bits (246), Expect = e-137
 Identities = 249/250 (99%)
 Strand = Plus / Plus

                                                                       
Query: 743 gatgtttgacaacaaagagaacagttcccatatacaattttttggctctcacgtactttg 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gatgtttgacaacaaagagaacagttcccatatacaattttttggctctcacgtactttg 677

                                                                       
Query: 803 gcaaacctgtgaaagtatggcactgcgataatggacgtgaatttaaaaacaaagtccaaa 862
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gcaaacctgtgaaagtatggcactgcgataatggacgtgaatttaaaaacaaagtccaaa 737

                                                                       
Query: 863 aagaattcctaaaactttttccaggctccaagtcagcacatggagctcctcgtacaccaa 922
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 aagaattcctaaaactttttccaggctccaagtcagcacatggagctcctcgtacaccaa 797

                                                                       
Query: 923 caactcaaggtatggtagaaagattgaatcgaactatcaaggagaggatctcaaaattaa 982
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 caactcaaggtatggtagaaagattgaatcgaactatcaaggagaggatctcaaaattaa 857

                     
Query: 983 aacaacaaga 992
           ||| ||||||
Sbjct: 858 aacgacaaga 867


 Score =  240 bits (121), Expect = 9e-63
 Identities = 121/121 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   attttcattttcccaaaatgaaacaagataaaataaatgaaattataaattatttaaaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   attttcattttcccaaaatgaaacaagataaaataaatgaaattataaattatttaaaat 60

                                                                       
Query: 61  ttattgaagataataattttgaaaatactaaacataaaaattataaatttttacatgatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttattgaagataataattttgaaaatactaaacataaaaattataaatttttacatgatg 120

            
Query: 121 a 121
           |
Sbjct: 121 a 121


>Contig-U13513-1 (Contig-U13513-1Q) /CSM_Contig/Contig-U13513-1Q.Seq.d
          Length = 1348

 Score =  765 bits (386), Expect = 0.0
 Identities = 386/386 (100%)
 Strand = Plus / Plus

                                                                       
Query: 291 gtatcactctgggaagaaatgcataaaggtcatataggaagagatgcaacctatgggaac 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gtatcactctgggaagaaatgcataaaggtcatataggaagagatgcaacctatgggaac 289

                                                                       
Query: 351 tacaagactaaatattataatatgggattgtattcttttgtatctgatgcagtagatacg 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tacaagactaaatattataatatgggattgtattcttttgtatctgatgcagtagatacg 349

                                                                       
Query: 411 tgtgacatttgccaacgaaatagaataaaaggtataacaaaggattttgctccaattgta 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tgtgacatttgccaacgaaatagaataaaaggtataacaaaggattttgctccaattgta 409

                                                                       
Query: 471 gataccgaggaatactcaagattggtttatgatttaacatcaattaaaggtgaacataaa 530
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gataccgaggaatactcaagattggtttatgatttaacatcaattaaaggtgaacataaa 469

                                                                       
Query: 531 gaaaaagttacatacgatgatgataatgaaaagatactaactaaactagatgatcttatc 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gaaaaagttacatacgatgatgataatgaaaagatactaactaaactagatgatcttatc 529

                                                                       
Query: 591 caatatgactctgtacaaccgtacgacaccgatgttgtttacattattctatgcatagat 650
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 caatatgactctgtacaaccgtacgacaccgatgttgtttacattattctatgcatagat 589

                                     
Query: 651 tcttttacaaaatttgctactggaag 676
           ||||||||||||||||||||||||||
Sbjct: 590 tcttttacaaaatttgctactggaag 615


 Score =  561 bits (283), Expect = e-159
 Identities = 292/295 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1061 ttttcttgatggtacttctaggtctctttctgaactattaaaacaagctttgtatgatta 1120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866  ttttcttgatggtacttctaggtctctttctgaactattaaaacaagctttgtatgatta 925

                                                                        
Query: 1121 caataatacaaaaacaagaacaattaaaatgacaccatctcaagctgttggtattgtacc 1180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 926  caataatacaaaaacaagaacaattaaaatgacaccatctcaagctgttggtattgttcc 985

                                                                        
Query: 1181 tttgtttattaatgtgcaatcagaacaagactctcaatcaattggtgtttcagatgtttc 1240
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986  tttgtttattaatgttcaatcagaacaagactctcaatcaattggtgtttcagatgtttc 1045

                                                                        
Query: 1241 aaaagaagaaataacagctattattcttgaaaatctcacaagttaccaaaatcaatggaa 1300
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 aaaagaagaaagaacagctattattcttgaaaatctcacaagttaccaaaatcaatggaa 1105

                                                                   
Query: 1301 ttcaaaaccaccaaagggattgaaagttggtgatactgtactctttctagaaatt 1355
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1106 ttcaaaaccaccaaagggattgaaagttggtgatactgtactctttctagaaatt 1160


 Score =  482 bits (243), Expect = e-135
 Identities = 250/251 (99%), Gaps = 1/251 (0%)
 Strand = Plus / Plus

                                                                       
Query: 743 gatgtttgacaacaaagagaacagttcccatatacaattttttggctctcacgtactttg 802
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gatgtttgacaacaaagagaacagttcccatatacaattttttggctctcacgtactttg 674

                                                                       
Query: 803 gcaaacctgtgaaagtatggcactgcgataatggacgtgaatttaaaaacaaagtccaaa 862
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gcaaacctgtgaaagtatggcactgcgataatggacgtgaatttaaaaacaaagtccaaa 734

                                                                       
Query: 863 aagaattcctaaaactttttccaggctccaagtcagcacatggagctcctcgtacaccaa 922
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aagaattcctaaaactttttccaggctccaagtcagcacatggagctcctcgtacaccaa 794

                                                                       
Query: 923 caactcaa-ggtatggtagaaagattgaatcgaactatcaaggagaggatctcaaaatta 981
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 caactcaagggtatggtagaaagattgaatcgaactatcaaggagaggatctcaaaatta 854

                      
Query: 982 aaacaacaaga 992
           |||||||||||
Sbjct: 855 aaacaacaaga 865


 Score =  278 bits (140), Expect = 4e-74
 Identities = 161/169 (95%), Gaps = 1/169 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2261 ttaaatcaccttccaaatcaccatcaataggaaaaatcgttaatgtgataccttcnnnnn 2320
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 1159 ttaaatcaccttccaaatcaccatcaataggaaaaatcgttaatgtgataccttcaaaaa 1218

                                                                        
Query: 2321 nngttgcaaaaacaaagttaacaaggacacaaaaattagaacttgatttggttgcaatta 2380
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1219 aagttgcaaaaacaaagttaacaaggacacaaaaattagaacttgatttggttgcaatta 1278

                                                             
Query: 2381 atagaagggggtatggggaaattagaaaataaaaacaagtggccaaatc 2429
            ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1279 atagaagggggtatggggaaattagaaaataaaaacaag-ggccaaatc 1326


 Score = 50.1 bits (25), Expect = 2e-05
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 2165 ttaaatcaccttccaaatcaccatc 2189
            |||||||||||||||||||||||||
Sbjct: 1159 ttaaatcaccttccaaatcaccatc 1183


 Score = 48.1 bits (24), Expect = 7e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 2141 ttaaatcaccttccaaatcaccat 2164
            ||||||||||||||||||||||||
Sbjct: 1159 ttaaatcaccttccaaatcaccat 1182


 Score = 40.1 bits (20), Expect = 0.016
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 2225 ttaaatcaccttccaattcaccat 2248
            |||||||||||||||| |||||||
Sbjct: 1159 ttaaatcaccttccaaatcaccat 1182


 Score = 32.2 bits (16), Expect = 4.0
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                                
Query: 2068 aaatcaccatccaaatcacc 2087
            |||||||| |||||||||||
Sbjct: 1161 aaatcaccttccaaatcacc 1180


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 56,416
Number of Sequences: 8402
Number of extensions: 56416
Number of successful extensions: 6638
Number of sequences better than 10.0: 258
length of query: 2494
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2477
effective length of database: 7,932,708
effective search space: 19649317716
effective search space used: 19649317716
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)

Query= Contig-U16372-1 (Contig-U16372-1Q) /CSM_Contig/Contig-U16372-1Q.Seq.d
         (2494 letters)

Database: ddbj_B
           98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...  1191   0.0    1
(U57081) Dictyostelium discoideum Tdd-4 transposable element...  1183   0.0    1
(BJ340821) Dictyostelium discoideum cDNA clone:dda4d01, 3' e...   979   0.0    4
(BJ418183) Dictyostelium discoideum cDNA clone:ddv31n19, 5' ...   908   0.0    2
(BJ357615) Dictyostelium discoideum cDNA clone:dda64k05, 3' ...   858   0.0    4
(BJ419431) Dictyostelium discoideum cDNA clone:ddv36h04, 5' ...   765   0.0    2
(BJ417958) Dictyostelium discoideum cDNA clone:ddv31m05, 5' ...   765   0.0    2
(BJ416097) Dictyostelium discoideum cDNA clone:ddv24o22, 5' ...   765   0.0    3
(BJ395921) Dictyostelium discoideum cDNA clone:dds40n13, 5' ...   765   0.0    2
(BJ364357) Dictyostelium discoideum cDNA clone:ddc31n08, 5' ...   765   0.0    2
(BJ337873) Dictyostelium discoideum cDNA clone:dda59c12, 5' ...   765   0.0    2
(BJ329041) Dictyostelium discoideum cDNA clone:dda30f13, 5' ...   765   0.0    2
(BJ387003) Dictyostelium discoideum cDNA clone:dds11h23, 5' ...   757   0.0    2
(BJ398067) Dictyostelium discoideum cDNA clone:dds10g23, 3' ...   589   0.0    4
(BJ389964) Dictyostelium discoideum cDNA clone:dds20o16, 5' ...   581   0.0    3
(BJ434551) Dictyostelium discoideum cDNA clone:ddv24o05, 3' ...   561   0.0    4
(BJ400740) Dictyostelium discoideum cDNA clone:dds14g18, 3' ...   496   0.0    4
(BJ398065) Dictyostelium discoideum cDNA clone:dds10g19, 3' ...   488   0.0    4
(BJ369055) Dictyostelium discoideum cDNA clone:ddc49k05, 5' ...   765   0.0    2
(BJ418157) Dictyostelium discoideum cDNA clone:ddv31h22, 5' ...   765   0.0    2
(BJ420380) Dictyostelium discoideum cDNA clone:ddv39i04, 5' ...   765   0.0    2
(BJ427449) Dictyostelium discoideum cDNA clone:ddv62p07, 5' ...   765   0.0    2
(BJ344220) Dictyostelium discoideum cDNA clone:dda18f20, 3' ...   944   0.0    3
(BJ330955) Dictyostelium discoideum cDNA clone:dda33i08, 5' ...   585   0.0    2
(BJ424183) Dictyostelium discoideum cDNA clone:ddv51l15, 5' ...   908   0.0    2
(BJ424577) Dictyostelium discoideum cDNA clone:ddv52l20, 5' ...   900   0.0    2
(BJ427893) Dictyostelium discoideum cDNA clone:ddv63o23, 5' ...   908   0.0    2
(BJ438015) Dictyostelium discoideum cDNA clone:ddv36h04, 3' ...   767   0.0    6
(AU267665) Dictyostelium discoideum vegetative cDNA clone:VS...   563   0.0    3
(BJ329146) Dictyostelium discoideum cDNA clone:dda30p21, 5' ...   765   0.0    2
(BJ324037) Dictyostelium discoideum cDNA clone:dda4n11, 5' e...   585   0.0    4
(BJ327181) Dictyostelium discoideum cDNA clone:dda19c13, 5' ...   765   0.0    2
(BJ369345) Dictyostelium discoideum cDNA clone:ddc50o06, 5' ...   757   0.0    2
(BJ323571) Dictyostelium discoideum cDNA clone:dda11a09, 5' ...   765   0.0    2
(BJ354956) Dictyostelium discoideum cDNA clone:dda55d11, 3' ...   676   0.0    7
(BJ349581) Dictyostelium discoideum cDNA clone:dda36o23, 3' ...   739   0.0    4
(BJ352015) Dictyostelium discoideum cDNA clone:dda45i12, 3' ...   726   0.0    4
(BJ446825) Dictyostelium discoideum cDNA clone:ddv63o23, 3' ...   724   0.0    4
(BJ353524) Dictyostelium discoideum cDNA clone:dda50c17, 3' ...   724   0.0    4
(BJ445948) Dictyostelium discoideum cDNA clone:ddv61l05, 3' ...   722   0.0    4
(BJ353269) Dictyostelium discoideum cDNA clone:dda49e17, 3' ...   722   0.0    4
(BJ336830) Dictyostelium discoideum cDNA clone:dda55d11, 5' ...   634   0.0    3
(BJ446357) Dictyostelium discoideum cDNA clone:ddv62p07, 3' ...   751   0.0    7
(BJ369199) Dictyostelium discoideum cDNA clone:ddc49n15, 5' ...   765   0.0    2
(BJ324024) Dictyostelium discoideum cDNA clone:dda4k09, 5' e...   765   0.0    2
(BJ362439) Dictyostelium discoideum cDNA clone:ddc21d19, 5' ...   765   0.0    2
(BJ399443) Dictyostelium discoideum cDNA clone:dds6d04, 3' e...   500   0.0    6
(BJ424110) Dictyostelium discoideum cDNA clone:ddv51l12, 5' ...   765   0.0    2
(BJ349026) Dictyostelium discoideum cDNA clone:dda35k01, 3' ...   726   0.0    4
(BJ362403) Dictyostelium discoideum cDNA clone:ddc21k13, 5' ...   765   0.0    2
(BJ386768) Dictyostelium discoideum cDNA clone:dds10g15, 5' ...   765   0.0    2
(BJ357545) Dictyostelium discoideum cDNA clone:dda63k22, 3' ...   716   0.0    4
(BJ378008) Dictyostelium discoideum cDNA clone:ddc26b24, 3' ...   496   0.0    4
(BJ361110) Dictyostelium discoideum cDNA clone:ddc9l19, 5' e...   765   0.0    2
(BJ363459) Dictyostelium discoideum cDNA clone:ddc26b24, 5' ...   765   0.0    2
(BJ346316) Dictyostelium discoideum cDNA clone:dda30f13, 3' ...   603   0.0    7
(BJ338635) Dictyostelium discoideum cDNA clone:dda62k09, 5' ...   680   0.0    2
(BJ327823) Dictyostelium discoideum cDNA clone:dda21l19, 5' ...   908   0.0    2
(BJ325759) Dictyostelium discoideum cDNA clone:dda2j05, 5' e...   908   0.0    2
(BJ324538) Dictyostelium discoideum cDNA clone:dda6e22, 5' e...   765   0.0    2
(BJ332166) Dictyostelium discoideum cDNA clone:dda38o04, 5' ...   900   0.0    2
(BJ425392) Dictyostelium discoideum cDNA clone:ddv55g14, 5' ...   908   0.0    1
(BJ335258) Dictyostelium discoideum cDNA clone:dda49d16, 5' ...   908   0.0    1
(BJ334729) Dictyostelium discoideum cDNA clone:dda47h15, 5' ...   908   0.0    1
(BJ323631) Dictyostelium discoideum cDNA clone:dda11p12, 5' ...   908   0.0    1
(BJ323520) Dictyostelium discoideum cDNA clone:dda11b06, 5' ...   908   0.0    1
(BJ331388) Dictyostelium discoideum cDNA clone:dda35k01, 5' ...   904   0.0    1
(BJ330609) Dictyostelium discoideum cDNA clone:dda32l01, 5' ...   902   0.0    1
(BJ366342) Dictyostelium discoideum cDNA clone:ddc38k17, 5' ...   900   0.0    1
(BJ333731) Dictyostelium discoideum cDNA clone:dda43f24, 5' ...   900   0.0    1
(BJ332204) Dictyostelium discoideum cDNA clone:dda38g08, 5' ...   900   0.0    1
(BJ328689) Dictyostelium discoideum cDNA clone:dda29h06, 5' ...   900   0.0    1
(BJ346001) Dictyostelium discoideum cDNA clone:dda29c23, 3' ...   557   0.0    5
(BJ343284) Dictyostelium discoideum cDNA clone:dda22h17, 3' ...   620   0.0    8
(BJ339034) Dictyostelium discoideum cDNA clone:dda63k22, 5' ...   898   0.0    1
(BJ369673) Dictyostelium discoideum cDNA clone:ddc51i11, 5' ...   896   0.0    1
(BJ334163) Dictyostelium discoideum cDNA clone:dda45i12, 5' ...   896   0.0    1
(BJ421950) Dictyostelium discoideum cDNA clone:ddv44i11, 5' ...   894   0.0    1
(BJ423456) Dictyostelium discoideum cDNA clone:ddv49c10, 5' ...   892   0.0    1
(BJ325247) Dictyostelium discoideum cDNA clone:dda13a14, 5' ...   892   0.0    1
(BJ326242) Dictyostelium discoideum cDNA clone:dda15n24, 5' ...   797   0.0    3
(BJ335262) Dictyostelium discoideum cDNA clone:dda49e17, 5' ...   888   0.0    1
(BJ335154) Dictyostelium discoideum cDNA clone:dda49k01, 5' ...   888   0.0    1
(BJ388461) Dictyostelium discoideum cDNA clone:dds9l16, 5' e...   765   0.0    3
(BJ369596) Dictyostelium discoideum cDNA clone:ddc51j04, 5' ...   886   0.0    1
(BJ339553) Dictyostelium discoideum cDNA clone:dda65c21, 5' ...   886   0.0    1
(BJ390999) Dictyostelium discoideum cDNA clone:dds14g18, 5' ...   789   0.0    3
(BJ335512) Dictyostelium discoideum cDNA clone:dda50c17, 5' ...   793   0.0    2
(BJ421375) Dictyostelium discoideum cDNA clone:ddv42m09, 5' ...   684   0.0    2
(BJ327002) Dictyostelium discoideum cDNA clone:dda18f20, 5' ...   789   0.0    3
(BJ339589) Dictyostelium discoideum cDNA clone:dda65j24, 5' ...   777   0.0    2
(BJ329385) Dictyostelium discoideum cDNA clone:dda24e21, 5' ...   797   0.0    2
(BJ328848) Dictyostelium discoideum cDNA clone:dda29c23, 5' ...   797   0.0    2
(BJ329907) Dictyostelium discoideum cDNA clone:dda26o15, 5' ...   797   0.0    2
(BJ418953) Dictyostelium discoideum cDNA clone:ddv34g17, 5' ...   872   0.0    1
(BJ326122) Dictyostelium discoideum cDNA clone:dda15f11, 5' ...   872   0.0    1
(BJ336415) Dictyostelium discoideum cDNA clone:dda53g22, 5' ...   751   0.0    2
(BJ427063) Dictyostelium discoideum cDNA clone:ddv61l05, 5' ...   789   0.0    2
(BJ336648) Dictyostelium discoideum cDNA clone:dda54k16, 5' ...   777   0.0    2
(BJ367277) Dictyostelium discoideum cDNA clone:ddc42f04, 5' ...   779   0.0    2
(BJ415929) Dictyostelium discoideum cDNA clone:ddv24o05, 5' ...   765   0.0    3
(BJ420938) Dictyostelium discoideum cDNA clone:ddv40m23, 5' ...   769   0.0    2
(BJ328012) Dictyostelium discoideum cDNA clone:dda22h17, 5' ...   585   0.0    4
(BJ423721) Dictyostelium discoideum cDNA clone:ddv50m06, 5' ...   777   0.0    2
(BJ439580) Dictyostelium discoideum cDNA clone:ddv40m23, 3' ...   678   0.0    4
(BJ338730) Dictyostelium discoideum cDNA clone:dda62c24, 5' ...   856   0.0    1
(BJ436682) Dictyostelium discoideum cDNA clone:ddv31n19, 3' ...   595   0.0    4
(BJ338762) Dictyostelium discoideum cDNA clone:dda62o19, 5' ...   688   0.0    2
(BJ357914) Dictyostelium discoideum cDNA clone:dda65k02, 3' ...   591   0.0    4
(BJ353148) Dictyostelium discoideum cDNA clone:dda49k01, 3' ...   591   0.0    4
(BJ348090) Dictyostelium discoideum cDNA clone:dda32l01, 3' ...   589   0.0    4
(BJ393140) Dictyostelium discoideum cDNA clone:dds30c10, 5' ...   446   0.0    3
(BJ353262) Dictyostelium discoideum cDNA clone:dda49d16, 3' ...   587   0.0    4
(BJ354502) Dictyostelium discoideum cDNA clone:dda53g22, 3' ...   418   0.0    5
(BJ343034) Dictyostelium discoideum cDNA clone:dda15n24, 3' ...   605   0.0    4
(BJ339102) Dictyostelium discoideum cDNA clone:dda64k05, 5' ...   777   0.0    2
(BJ358141) Dictyostelium discoideum cDNA clone:dda65j24, 3' ...   573   0.0    4
(BJ384898) Dictyostelium discoideum cDNA clone:ddc51j04, 3' ...   589   0.0    4
(BJ351537) Dictyostelium discoideum cDNA clone:dda43f24, 3' ...   599   0.0    4
(BJ349992) Dictyostelium discoideum cDNA clone:dda38g08, 3' ...   640   0.0    3
(BJ371577) Dictyostelium discoideum cDNA clone:ddc58j14, 5' ...   815   0.0    1
(BJ397999) Dictyostelium discoideum cDNA clone:dds10g15, 3' ...   543   0.0    6
(BJ326228) Dictyostelium discoideum cDNA clone:dda15j22, 5' ...   446   0.0    4
(BJ354754) Dictyostelium discoideum cDNA clone:dda54k16, 3' ...   543   0.0    4
(BJ346452) Dictyostelium discoideum cDNA clone:dda30p21, 3' ...   480   0.0    7
(AU267664) Dictyostelium discoideum vegetative cDNA clone:VS...   799   0.0    1
(BJ329567) Dictyostelium discoideum cDNA clone:dda25c13, 5' ...   797   0.0    1
(BJ323946) Dictyostelium discoideum cDNA clone:dda4d01, 5' e...   777   0.0    2
(BJ339382) Dictyostelium discoideum cDNA clone:dda65k02, 5' ...   769   0.0    2
(BJ342811) Dictyostelium discoideum cDNA clone:dda1n16, 3' e...   781   0.0    1
(BJ417668) Dictyostelium discoideum cDNA clone:ddv28j12, 5' ...   434   0.0    3
(BJ360103) Dictyostelium discoideum cDNA clone:ddc4d10, 5' e...   765   0.0    2
(BJ386872) Dictyostelium discoideum cDNA clone:dds11h02, 5' ...   494   0.0    3
(BJ364850) Dictyostelium discoideum cDNA clone:ddc33p05, 5' ...   765   0.0    2
(BJ325662) Dictyostelium discoideum cDNA clone:dda1j20, 5' e...   765   0.0    1
(AU033634) Dictyostelium discoideum slug cDNA, clone SLB252.      432   0.0    6
(BJ404989) Dictyostelium discoideum cDNA clone:dds30c10, 3' ...   444   0.0    5
(BJ356823) Dictyostelium discoideum cDNA clone:dda61f15, 3' ...   498   0.0    6
(BJ356888) Dictyostelium discoideum cDNA clone:dda61c24, 3' ...   531   0.0    6
(BJ443431) Dictyostelium discoideum cDNA clone:ddv52l20, 3' ...   539   0.0    4
(BJ357078) Dictyostelium discoideum cDNA clone:dda62k09, 3' ...   462   0.0    6
(BJ325025) Dictyostelium discoideum cDNA clone:dda9f09, 5' e...   686   0.0    2
(BJ437538) Dictyostelium discoideum cDNA clone:ddv34g17, 3' ...   589   0.0    2
(BJ378909) Dictyostelium discoideum cDNA clone:ddc33p05, 3' ...   502   0.0    5
(BJ386552) Dictyostelium discoideum cDNA clone:ddc58j14, 3' ...   281   0.0    6
(BJ346714) Dictyostelium discoideum cDNA clone:dda24e21, 3' ...   444   0.0    4
(BJ387756) Dictyostelium discoideum cDNA clone:dds4a20, 5' e...   615   0.0    2
(BJ442240) Dictyostelium discoideum cDNA clone:ddv49c10, 3' ...   529   0.0    3
(BJ420726) Dictyostelium discoideum cDNA clone:ddv40a08, 5' ...   696   0.0    1
(BJ347302) Dictyostelium discoideum cDNA clone:dda26o15, 3' ...   398   0.0    5
(BJ348476) Dictyostelium discoideum cDNA clone:dda33i08, 3' ...   363   0.0    4
(BJ443016) Dictyostelium discoideum cDNA clone:ddv51l15, 3' ...   311   0.0    5
(BJ384968) Dictyostelium discoideum cDNA clone:ddc51i11, 3' ...   456   0.0    4
(BJ390200) Dictyostelium discoideum cDNA clone:dds21c14, 5' ...   634   0.0    2
(BJ339992) Dictyostelium discoideum cDNA clone:dda11a09, 3' ...   377   e-179  6
(BJ365161) Dictyostelium discoideum cDNA clone:ddc34h08, 5' ...   618   e-172  1
(BJ352692) Dictyostelium discoideum cDNA clone:dda47h15, 3' ...   246   e-157  4
(BJ324575) Dictyostelium discoideum cDNA clone:dda7a03, 5' e...   293   e-149  2
(BJ342896) Dictyostelium discoideum cDNA clone:dda15f11, 3' ...   240   e-147  5
(BJ435791) Dictyostelium discoideum cDNA clone:ddv28j12, 3' ...   278   e-147  7
(BJ379282) Dictyostelium discoideum cDNA clone:ddc34h08, 3' ...   182   e-143  7
(BJ361307) Dictyostelium discoideum cDNA clone:ddc16l13, 5' ...   509   e-139  1
(C92023) Dictyostelium discoideum slug cDNA, clone SSC174.        297   e-137  3
(BJ338501) Dictyostelium discoideum cDNA clone:dda61c24, 5' ...   412   e-135  2
(BJ381608) Dictyostelium discoideum cDNA clone:ddc42f04, 3' ...   337   e-131  4
(BJ374693) Dictyostelium discoideum cDNA clone:ddc9l19, 3' e...   462   e-128  2
(BJ398290) Dictyostelium discoideum cDNA clone:dds11h23, 3' ...   210   e-127  5
(BJ417571) Dictyostelium discoideum cDNA clone:ddv28e06, 5' ...   452   e-122  1
(BJ357200) Dictyostelium discoideum cDNA clone:dda62c24, 3' ...   270   e-122  3
(BJ341469) Dictyostelium discoideum cDNA clone:dda6e22, 3' e...   218   e-121  6
(AU053358) Dictyostelium discoideum slug cDNA, clone SLI455.      202   e-112  6
(BJ386817) Dictyostelium discoideum cDNA clone:dds10g19, 5' ...   400   e-106  1
(BJ440660) Dictyostelium discoideum cDNA clone:ddv44i11, 3' ...   206   3e-97  4
(BJ338448) Dictyostelium discoideum cDNA clone:dda61f15, 5' ...   367   1e-96  1
(BJ434779) Dictyostelium discoideum cDNA clone:ddv24o22, 3' ...   214   3e-92  5
(BJ356159) Dictyostelium discoideum cDNA clone:dda59n12, 3' ...   178   2e-85  4
(BJ439365) Dictyostelium discoideum cDNA clone:ddv40a08, 3' ...   168   6e-82  5
(BJ340915) Dictyostelium discoideum cDNA clone:dda4k09, 3' e...   218   3e-79  6
(BJ325710) Dictyostelium discoideum cDNA clone:dda1i06, 5' e...   307   1e-78  1
(BJ340060) Dictyostelium discoideum cDNA clone:dda11p12, 3' ...   192   4e-77  3
(BJ340442) Dictyostelium discoideum cDNA clone:dda2j05, 3' e...   141   5e-77  4
(BJ440030) Dictyostelium discoideum cDNA clone:ddv42m09, 3' ...   165   2e-75  4
(BJ343057) Dictyostelium discoideum cDNA clone:dda1j20, 3' e...   218   1e-73  2
(BJ325628) Dictyostelium discoideum cDNA clone:dda1n16, 5' e...   210   4e-73  3
(BJ386820) Dictyostelium discoideum cDNA clone:dds10g23, 5' ...   210   4e-73  2
(BJ342678) Dictyostelium discoideum cDNA clone:dda1i06, 3' e...   210   4e-73  2
(BJ345185) Dictyostelium discoideum cDNA clone:dda21l19, 3' ...   210   8e-71  3
(BJ344490) Dictyostelium discoideum cDNA clone:dda19c13, 3' ...   218   3e-70  6
(BJ398124) Dictyostelium discoideum cDNA clone:dds11h02, 3' ...   218   4e-69  6
(BJ343020) Dictyostelium discoideum cDNA clone:dda15j22, 3' ...   210   2e-67  6
(BJ399199) Dictyostelium discoideum cDNA clone:dds4a20, 3' e...   210   3e-64  3
(BJ324315) Dictyostelium discoideum cDNA clone:dda5b19, 5' e...   240   2e-58  1
(BJ339928) Dictyostelium discoideum cDNA clone:dda11b06, 3' ...   155   3e-58  3
(BJ373649) Dictyostelium discoideum cDNA clone:ddc4d10, 3' e...   198   4e-57  4
(BJ442532) Dictyostelium discoideum cDNA clone:ddv50m06, 3' ...   157   4e-52  3
(BJ342047) Dictyostelium discoideum cDNA clone:dda9f09, 3' e...   204   5e-50  2
(BJ436438) Dictyostelium discoideum cDNA clone:ddv31m05, 3' ...   165   3e-48  2
(BJ349956) Dictyostelium discoideum cDNA clone:dda38o04, 3' ...   188   3e-48  2
(BJ340929) Dictyostelium discoideum cDNA clone:dda4n11, 3' e...   204   1e-47  1
(BJ388535) Dictyostelium discoideum cDNA clone:dds6d04, 5' e...   101   2e-40  2
(AF298206) Dictyostelium discoideum transposon Tdd-5, comple...    66   1e-31  6
(BJ346909) Dictyostelium discoideum cDNA clone:dda25c13, 3' ...    96   1e-29  4
(BJ341225) Dictyostelium discoideum cDNA clone:dda5b19, 3' e...   100   1e-18  2
(BJ335243) Dictyostelium discoideum cDNA clone:dda49a13, 5' ...    52   3e-12  3
(AL682152) Xenopus tropicalis EST, clone TGas060h18 5'.            32   5e-04  4
(CX905488) JGI_CAAM15418.fwd NIH_XGC_tropTe3 Xenopus (Silura...    32   6e-04  4
(CX398583) JGI_XZT3297.fwd NIH_XGC_tropTad5 Xenopus (Siluran...    32   9e-04  4
(DT413795) JGI_CABI12116.fwd NIH_XGC_tropOvi1 Xenopus (Silur...    32   9e-04  4
(DN073718) JGI_CABD7908.fwd NIH_XGC_tropLun1 Xenopus (Silura...    32   9e-04  4
(CX329872) JGI_XZT68527.fwd NIH_XGC_tropTad5 Xenopus (Silura...    32   0.001  4
(CX827626) JGI_CAAK5797.fwd NIH_XGC_tropBrn3 Xenopus (Silura...    32   0.001  4
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s...    54   0.004  2
(DC190664) Xenopus (Silurana) tropicalis NBRP cDNA clone: st...    32   0.013  4
(CX929275) JGI_CAAN12502.fwd NIH_XGC_tropTe4 Xenopus (Silura...    32   0.014  4
(BU464410) 603369110F1 CSEQRBN19 Gallus gallus cDNA clone Ch...    40   0.022  2
(AC180406) Strongylocentrotus purpuratus clone R3-3009L23, W...    36   0.072  8
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    40   0.090  20
(BJ419549) Dictyostelium discoideum cDNA clone:ddv36o07, 5' ...    52   0.10   1
(AP007421) Lotus japonicus genomic DNA, chromosome 6, clone:...    46   0.28   3
(CF799334) Lr_PAHCF_18A04_M13R Earthworm Fluorantene Exposur...    38   0.31   2
(EL419276) CHCL7650.b1_D18.ab1 CHC(LMS) Texas blueweed Helia...    50   0.41   1
(CA128714) SCJLLR2028A05.g LR2 Saccharum officinarum cDNA cl...    50   0.41   1
(BY981774) Physcomitrella patens subsp. patens cDNA clone: P...    50   0.41   1
(BQ836396) rf45d12.y1 Meloidogyne hapla J2 pAMP1 v1 Meloidog...    50   0.41   1
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    38   0.49   13
(DR874103) JGI_CABH872.fwd NIH_XGC_tropSkeMus1 Xenopus (Silu...    32   0.51   3
(AL633292) Xenopus tropicalis EST, clone TGas007o07 5'.            32   0.60   3
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699...    40   0.60   20
(CU914128) Medicago truncatula chromosome 5 clone mth2-84e4,...    34   0.67   9
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet...    42   0.76   22
(CU816232) A BAC library has been constructed from PN40024 g...    42   0.78   2
(CU748048) A BAC library has been constructed from PN40024 g...    42   0.79   2
(AC162393) Bos taurus clone CH240-122H5, WORKING DRAFT SEQUE...    34   0.85   2
(AL935289) Zebrafish DNA sequence from clone CH211-232C12.         34   0.87   2
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-...    34   0.87   2
(EK143799) 1095456010529 Global-Ocean-Sampling_GS-31-01-01-1...    38   0.98   2
(BQ736129) AGENCOURT_8097280 NICHD_XGC_Emb4 Xenopus laevis c...    32   1.1    3
(BQ897396) AGENCOURT_8670872 NICHD_XGC_Emb4 Xenopus laevis c...    32   1.4    3
(BX601644) Zebrafish DNA sequence from clone DKEY-21O13 in l...    48   1.6    1
(BV012504) ORS 285 Sunflower strain HA89 genomic DNA Heliant...    48   1.6    1
(AC173251) Bos taurus clone CH240-411M5, WORKING DRAFT SEQUE...    48   1.6    1
(AC163111) Bos taurus clone CH240-239G8, WORKING DRAFT SEQUE...    48   1.6    1
(AL401322) T3 end of clone AS0AA027B01 of library AS0AA from...    48   1.6    1
(CE520506) tigr-gss-dog-17000365630873 Dog Library Canis lup...    48   1.6    1
(DB918132) Idiosepius paradoxus cDNA, clone:Ip_aB_031_G06, 5...    48   1.6    1
(DB918018) Idiosepius paradoxus cDNA, clone:Ip_aB_031_A22, 5...    48   1.6    1
(FD457980) EGGAP93TFB Haematobia irritans eggs Haematobia ir...    48   1.6    1
(DH636839) Rattus norvegicus DNA, BAC clone: RNB1-174P02, 3'...    42   3.0    2
(DH636854) Rattus norvegicus DNA, BAC clone: RNB1-174P10, 3'...    42   3.0    2
(BX001006) Zebrafish DNA sequence from clone DKEY-148M7 in l...    36   3.1    2
(AC166941) Bos taurus clone CH240-77B21, WORKING DRAFT SEQUE...    32   3.1    2
(BX470104) Zebrafish DNA sequence from clone DKEY-148M7.           36   3.4    2
(AY352656) HIV-1 isolate UG035 from Uganda, complete genome.       34   3.7    2
(DR912244) EST1103783 Aquilegia cDNA library Aquilegia formo...    42   3.9    2
(EJ337572) 1092963490422 Global-Ocean-Sampling_GS-28-01-01-1...    36   4.1    2
(EJ145315) 1092343701868 Global-Ocean-Sampling_GS-27-01-01-1...    36   4.2    2
(ER963546) SOOAK19TF LargeInsertSoybeanGenLibBuild4 Glycine ...    34   4.2    2
(AY712677) Apis koschevnikovi isolate 1 tRNA-Ile gene and NA...    34   4.3    2
(AC122416) Mus musculus BAC clone RP24-157E17 from chromosom...    34   4.7    9
(FE803637) CCAG25169.b1 CCAG Petrolisthes cinctipes heart, g...    36   5.6    3
(AJ831658) Zygaena storaiae storaiae mitochondrial tRNA-Leu ...    38   6.0    2
(CT025912) Zebrafish DNA sequence from clone CH211-148L7 in ...    46   6.4    1
(AC125088) Mus musculus BAC clone RP24-152J3 from chromosome...    46   6.4    1
(AC055766) Mus musculus X BAC RP23-149C7 (Roswell Park Cance...    46   6.4    1
(AM470189) Vitis vinifera contig VV78X135758.3, whole genome...    46   6.4    1
(CQ870484) Sequence 905 from Patent WO2004074320.                  46   6.4    1
(AC097648) Homo sapiens BAC clone RP11-63H19 from 4, complet...    46   6.4    1
(AC027248) Homo sapiens chromosome 18, clone RP11-751P21, co...    46   6.4    1
(AC022915) Homo sapiens chromosome 8, clone RP11-770E5, comp...    46   6.4    1
(AC136534) Rattus norvegicus clone CH230-321O1, *** SEQUENCI...    46   6.4    1
(AC132764) Rattus norvegicus clone CH230-367G19, *** SEQUENC...    46   6.4    1
(AC131377) Lytechinus variegatus clone Lv114C22, *** SEQUENC...    46   6.4    1
(AC112624) Rattus norvegicus clone CH230-26H4, *** SEQUENCIN...    46   6.4    1
(AC111822) Rattus norvegicus clone CH230-56O1, *** SEQUENCIN...    46   6.4    1
(AC091449) Rattus norvegicus clone CH230-2C10, WORKING DRAFT...    46   6.4    1
(AC190840) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB...    46   6.4    1
(AC011046) Homo sapiens clone RP11-8P6, WORKING DRAFT SEQUEN...    46   6.4    1
(AZ193605) SP_1023_B1_G10_SP6E Strongylocentrotus purpuratus...    46   6.4    1
(ED633918) GM_WBa0037P09.f GM_WBa Glycine max genomic clone ...    46   6.4    1
(DE388689) Bombyx mori genomic DNA, BAC clone:10G1F.               46   6.4    1
(AG106683) Pan troglodytes DNA, clone: PTB-111E10.F.               46   6.4    1
(DC227858) Plasmodium berghei strain ANKA cDNA clone:SG01036...    46   6.4    1
(DC221149) Plasmodium berghei strain ANKA cDNA clone:MZ00379...    46   6.4    1
(BP114011) Plasmodium berghei strain ANKA cDNA, clone: FCPb1...    46   6.4    1
(BM159505) EST562028 PyBS Plasmodium yoelii yoelii cDNA clon...    46   6.4    1
(BF296738) 042PbB10 Pb cDNA #17, Tommaso Pace, Marta Ponzi, ...    46   6.4    1
(BB979023) Plasmodium berghei str. ANKA cDNA clone: OK009086...    46   6.4    1
(EY391644) CAXA9380.rev CAXA Helobdella robusta Subtracted L...    46   6.4    1
(EY391610) CAXA9363.rev CAXA Helobdella robusta Subtracted L...    46   6.4    1
(EY391457) CAXA9279.rev CAXA Helobdella robusta Subtracted L...    46   6.4    1
(EY390061) CAXA8530.rev CAXA Helobdella robusta Subtracted L...    46   6.4    1
(EY387791) CAXA6948.rev CAXA Helobdella robusta Subtracted L...    46   6.4    1
(EY386772) CAXA6405.rev CAXA Helobdella robusta Subtracted L...    46   6.4    1
(EY385782) CAXA5874.rev CAXA Helobdella robusta Subtracted L...    46   6.4    1
(EY384150) CAXA4991.rev CAXA Helobdella robusta Subtracted L...    46   6.4    1
(EY383312) CAXA4536.rev CAXA Helobdella robusta Subtracted L...    46   6.4    1
(EY381645) CAXA3584.rev CAXA Helobdella robusta Subtracted L...    46   6.4    1
(EY379253) CAXA17700.rev CAXA Helobdella robusta Subtracted ...    46   6.4    1
(EY376100) CAXA15990.rev CAXA Helobdella robusta Subtracted ...    46   6.4    1
(EY375008) CAXA15399.rev CAXA Helobdella robusta Subtracted ...    46   6.4    1
(EY374920) CAXA15350.rev CAXA Helobdella robusta Subtracted ...    46   6.4    1
(EY372996) CAXA14314.rev CAXA Helobdella robusta Subtracted ...    46   6.4    1
(EY372736) CAXA14168.rev CAXA Helobdella robusta Subtracted ...    46   6.4    1
(EY370662) CAXA13031.rev CAXA Helobdella robusta Subtracted ...    46   6.4    1
(EY369206) CAXA12238.rev CAXA Helobdella robusta Subtracted ...    46   6.4    1
(EY368752) CAXA11985.rev CAXA Helobdella robusta Subtracted ...    46   6.4    1
(EY361764) CAWZ7898.rev CAWZ Helobdella robusta Primary Late...    46   6.4    1
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255...    46   6.4    1
(AY722925) Borrelia garinii PBi variable plasmid segment G1a...    34   6.7    6
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084...    36   6.7    8
(DJ387372) Diagnosis of Diseases Associated with Apoptosis.        38   6.9    5
(AX345127) Sequence 198 from Patent WO0200928.                     38   6.9    5
(AX281280) Sequence 22 from Patent WO0177164.                      38   6.9    5
(AF465309) Dictyostelium discoideum ABC transporter ABCA.7 (...    36   8.0    4
(AL023828) Caenorhabditis elegans YAC Y17G7B.                      38   8.6    8
(CP000568) Clostridium thermocellum ATCC 27405, complete gen...    34   9.0    2

>(AC116957) Dictyostelium discoideum chromosome 2 map 1685067-2090751
              strain AX4, complete sequence.
          Length = 405682

 Score = 1191 bits (601), Expect = 0.0
 Identities = 610/613 (99%)
 Strand = Plus / Plus


Query: 743    gatgtttgacaacaaagagaacagttcccatatacaattttttggctctcacgtactttg 802
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140225 gatgtttgacaacaaagagaacagttcccatatacaattttttggctctcacgtactttg 140284


Query: 803    gcaaacctgtgaaagtatggcactgcgataatggacgtgaatttaaaaacaaagtccaaa 862
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140285 gcaaacctgtgaaagtatggcactgcgataatggacgtgaatttaaaaacaaagtccaaa 140344


Query: 863    aagaattcctaaaactttttccaggctccaagtcagcacatggagctcctcgtacaccaa 922
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140345 aagaattcctaaaactttttccaggctccaagtcagcacatggagctcctcgtacaccaa 140404


Query: 923    caactcaaggtatggtagaaagattgaatcgaactatcaaggagaggatctcaaaattaa 982
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140405 caactcaaggtatggtagaaagattgaatcgaactatcaaggagaggatctcaaaattaa 140464


Query: 983    aacaacaagagtatgatattgtgaacaatataaattatcgatatgtttattaattaatca 1042
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140465 aacaacaagagtatgatattgtgaacaatataaattatcgatatgtttattaattaatca 140524


Query: 1043   tttataaataaattttagttttcttgatggtacttctaggtctctttctgaactattaaa 1102
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140525 tttataaataaattttagttttcttgatggtacttctaggtctctttctgaactattaaa 140584


Query: 1103   acaagctttgtatgattacaataatacaaaaacaagaacaattaaaatgacaccatctca 1162
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140585 acaagctttgtatgattacaataatacaaaaacaagaacaattaaaatgacaccatctca 140644


Query: 1163   agctgttggtattgtacctttgtttattaatgtgcaatcagaacaagactctcaatcaat 1222
              ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 140645 agctgttggtattgttcctttgtttattaatgttcaatcagaacaagactctcaatcaat 140704


Query: 1223   tggtgtttcagatgtttcaaaagaagaaataacagctattattcttgaaaatctcacaag 1282
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 140705 tggtgtttcagatgtttcaaaagaagaaagaacagctattattcttgaaaatctcacaag 140764


Query: 1283   ttaccaaaatcaatggaattcaaaaccaccaaagggattgaaagttggtgatactgtact 1342
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140765 ttaccaaaatcaatggaattcaaaaccaccaaagggattgaaagttggtgatactgtact 140824


Query: 1343   ctttctagaaatt 1355
              |||||||||||||
Sbjct: 140825 ctttctagaaatt 140837

 Score =  472 bits (238), Expect(10) = 0.0
 Identities = 238/238 (100%)
 Strand = Plus / Plus


Query: 440    aggtataacaaaggattttgctccaattgtagataccgaggaatactcaagattggttta 499
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139922 aggtataacaaaggattttgctccaattgtagataccgaggaatactcaagattggttta 139981


Query: 500    tgatttaacatcaattaaaggtgaacataaagaaaaagttacatacgatgatgataatga 559
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139982 tgatttaacatcaattaaaggtgaacataaagaaaaagttacatacgatgatgataatga 140041


Query: 560    aaagatactaactaaactagatgatcttatccaatatgactctgtacaaccgtacgacac 619
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140042 aaagatactaactaaactagatgatcttatccaatatgactctgtacaaccgtacgacac 140101


Query: 620    cgatgttgtttacattattctatgcatagattcttttacaaaatttgctactggaagg 677
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140102 cgatgttgtttacattattctatgcatagattcttttacaaaatttgctactggaagg 140159

 Score =  446 bits (225), Expect(10) = 0.0
 Identities = 225/225 (100%)
 Strand = Plus / Plus


Query: 219    gtcatgaattgtggcggagatagaaatatatcaaaagaagtgtgtttagaagtaattaat 278
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139622 gtcatgaattgtggcggagatagaaatatatcaaaagaagtgtgtttagaagtaattaat 139681


Query: 279    gattatagaatggtatcactctgggaagaaatgcataaaggtcatataggaagagatgca 338
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139682 gattatagaatggtatcactctgggaagaaatgcataaaggtcatataggaagagatgca 139741


Query: 339    acctatgggaactacaagactaaatattataatatgggattgtattcttttgtatctgat 398
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139742 acctatgggaactacaagactaaatattataatatgggattgtattcttttgtatctgat 139801


Query: 399    gcagtagatacgtgtgacatttgccaacgaaatagaataaaaggt 443
              |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139802 gcagtagatacgtgtgacatttgccaacgaaatagaataaaaggt 139846

 Score =  192 bits (97), Expect(10) = 0.0
 Identities = 97/97 (100%)
 Strand = Plus / Plus


Query: 1368   aaaatattgattttgtgtaaaattcataaggtaatacaggaagacactaaacaactttat 1427
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140926 aaaatattgattttgtgtaaaattcataaggtaatacaggaagacactaaacaactttat 140985


Query: 1428   aaacttgaatttttggaagatggaatcaatagccttc 1464
              |||||||||||||||||||||||||||||||||||||
Sbjct: 140986 aaacttgaatttttggaagatggaatcaatagccttc 141022

 Score =  117 bits (59), Expect(10) = 0.0
 Identities = 59/59 (100%)
 Strand = Plus / Plus


Query: 114    catgatgagtaaatatttttccttacaataacacaatcattttttaaattctgaccaat 172
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139517 catgatgagtaaatatttttccttacaataacacaatcattttttaaattctgaccaat 139575

 Score = 28.2 bits (14), Expect(10) = 0.0
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 1      attttcattttccc 14
              ||||||||||||||
Sbjct: 139404 attttcattttccc 139417

 Score = 28.2 bits (14), Expect(10) = 0.0
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 1595   atttaaataatgat 1608
              ||||||||||||||
Sbjct: 198713 atttaaataatgat 198726

 Score = 28.2 bits (14), Expect(10) = 0.0
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 1844   caaatttaatgaat 1857
              ||||||||||||||
Sbjct: 298899 caaatttaatgaat 298912

 Score = 28.2 bits (14), Expect(10) = 0.0
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 2015   ctcctttaaaatca 2028
              ||||||||||||||
Sbjct: 373167 ctcctttaaaatca 373180

 Score = 26.3 bits (13), Expect(10) = 0.0
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 1784   tcaataatgaaat 1796
              |||||||||||||
Sbjct: 203140 tcaataatgaaat 203152

 Score = 26.3 bits (13), Expect(10) = 0.0
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 1819   tttttaaataata 1831
              |||||||||||||
Sbjct: 229134 tttttaaataata 229146

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,766,157,248
Number of extensions: 167453137
Number of successful extensions: 13787084
Number of sequences better than 10.0: 316
Length of query: 2494
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 2469
Effective length of database: 96,311,147,814
Effective search space: 237792223952766
Effective search space used: 237792223952766
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

Query= Contig-U16372-1 (Contig-U16372-1Q) /CSM_Contig/Contig-U16372-1Q.Seq.d
         (2494 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U57081_1(U57081|pid:none) Dictyostelium discoideum Tdd-4 transpo...   652   0.0
U57081_2(U57081|pid:none) Dictyostelium discoideum Tdd-4 transpo...   652   0.0
AY634221_2(AY634221|pid:none) Oikopleura dioica transposon LTR r...    52   8e-05
EU839608_2(EU839608|pid:none) HIV-1 isolate 01TT.CRC50069 from T...    48   0.002
EU908751_1(EU908751|pid:none) HIV-1 isolate pt6w20 from Italy in...    47   0.003
DQ354122_2(DQ354122|pid:none) HIV-1 isolate MU2003 subtype CRF01...    46   0.006
FJ388921_2(FJ388921|pid:none) HIV-1 isolate CY090 from Cyprus ga...    46   0.006
EU031915_2(EU031915|pid:none) HIV-1 isolate 07MYKLD49 from Malay...    46   0.006
EU908759_1(EU908759|pid:none) HIV-1 isolate pt4bl from Italy int...    46   0.006
DQ054367_1(DQ054367|pid:none) HIV-1 isolate 04KBH8 from South Ko...    46   0.006
AB254148_2(AB254148|pid:none) Human immunodeficiency virus 1 pro...    46   0.008
EU908763_1(EU908763|pid:none) HIV-1 isolate pt4w32 from Italy in...    46   0.008
EU908762_1(EU908762|pid:none) HIV-1 isolate pt4W24 from Italy in...    46   0.008
DQ493649_7(DQ493649|pid:none) Zea mays cultivar Coroico bz locus...    46   0.008
EF637052_2(EF637052|pid:none) HIV-1 isolate BREPM1029 from Brazi...    46   0.008
FJ554725_1(FJ554725|pid:none) HIV-1 isolate W52 from Australia i...    46   0.008
FJ554682_1(FJ554682|pid:none) HIV-1 isolate W9 from Australia in...    46   0.008
DQ003591_2(DQ003591|pid:none) Reticuloendotheliosis virus strain...    45   0.010
(Q9QBY3) RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160G...    45   0.010
AF484486_1(AF484486|pid:none) HIV-1 isolate 99UGD26830 from Ugan...    45   0.010
AF457073_2(AF457073|pid:none) HIV-1 isolate 99KE_KSM4015 from Ke...    45   0.010
FJ786321_1(FJ786321|pid:none) HIV-1 isolate ahi54_06 from USA in...    45   0.010
EU908745_1(EU908745|pid:none) HIV-1 isolate pt1w24 from Italy in...    45   0.010
AY795908_2(AY795908|pid:none) HIV-1 isolate 02YE519 from Yemen g...    45   0.010
DQ460683_1(DQ460683|pid:none) HIV-1 clone KE271p-c2 from Kenya p...    45   0.010
FJ645475_1(FJ645475|pid:none) HIV-1 isolate TVC-97 from United K...    45   0.010
EU908746_1(EU908746|pid:none) HIV-1 isolate pt1w48 from Italy in...    45   0.010
FJ786290_1(FJ786290|pid:none) HIV-1 isolate ahi23_96 from USA in...    45   0.010
FJ645507_1(FJ645507|pid:none) HIV-1 isolate BR016 from Barbados ...    45   0.013
AY560109_1(AY560109|pid:none) HIV-1 isolate 98USHVTN8229c6 from ...    45   0.013
AF361871_2(AF361871|pid:none) HIV-1 isolate 97TZ01 from Tanzania...    45   0.013
FJ496202_2(FJ496202|pid:none) HIV-1 isolate ZM247F_flE3 from Zam...    45   0.013
EU618592_1(EU618592|pid:none) HIV-1 isolate ABB115-98 from Camer...    45   0.013
DQ848147_1(DQ848147|pid:none) HIV-1 isolate K17702 from Saudi Ar...    45   0.013
FJ496198_2(FJ496198|pid:none) HIV-1 isolate ZM247F_flB8 from Zam...    45   0.013
EU883852_1(EU883852|pid:none) HIV-1 isolate Pt21Y2007 from Spain...    45   0.013
AF120188_1(AF120188|pid:none) HIV-1 CNG250 from Republic of the ...    45   0.013
DQ207940_2(DQ207940|pid:none) HIV-1 isolate 03GEMZ004 from Georg...    45   0.013
DQ444472_1(DQ444472|pid:none) Nosema bombycis retrotransposon Nb...    45   0.013
AY043176_2(AY043176|pid:none) HIV-1 isolate CTSc2 from South Afr...    45   0.013
AJ320484_1(AJ320484|pid:none) Human immunodeficiency virus type ...    45   0.013
EU618471_1(EU618471|pid:none) HIV-1 isolate AB1065 from Cameroon...    45   0.013
FJ645506_1(FJ645506|pid:none) HIV-1 isolate BR014 from Barbados ...    45   0.013
EU618102_1(EU618102|pid:none) HIV-1 isolate 172-8 from Cameroon ...    45   0.013
EF472773_1(EF472773|pid:none) HIV-1 clone 52B from USA integrase...    45   0.013
AF484515_1(AF484515|pid:none) HIV-1 isolate 99UGE13613 from Ugan...    45   0.013
FJ480287_1(FJ480287|pid:none) HIV-1 isolate ABB66-96 from Camero...    45   0.013
DQ460694_1(DQ460694|pid:none) HIV-1 clone KE271p-c7 from Kenya p...    45   0.013
DQ493648_7(DQ493648|pid:none) Zea mays cultivar I137TN bz locus ...    45   0.013
AF484500_1(AF484500|pid:none) HIV-1 isolate 99UGK10192 from Ugan...    45   0.017
FJ554677_1(FJ554677|pid:none) HIV-1 isolate W4 from Australia in...    45   0.017
AY371168_2(AY371168|pid:none) HIV-1 isolate 01CM.4008HAN from Ca...    45   0.017
AF484506_1(AF484506|pid:none) HIV-1 isolate 98UG57132 from Ugand...    45   0.017
DQ354121_2(DQ354121|pid:none) HIV-1 isolate M171 subtype CRF01_A...    45   0.017
FJ397601_1(FJ397601|pid:none) Simian immunodeficiency virus clon...    45   0.017
EF150565_1(EF150565|pid:none) HIV-1 isolate 01BAB094 from Brazil...    45   0.017
FJ786365_1(FJ786365|pid:none) HIV-1 isolate ahi97_04 from USA in...    45   0.017
AY967805_2(AY967805|pid:none) HIV-1 isolate YNRL9828 from China,...    45   0.017
AY661758_1(AY661758|pid:none) HIV-1 isolate 00CD015 from Democra...    45   0.017
AY905584_1(AY905584|pid:none) HIV-1 isolate MCH2886B from Kenya ...    45   0.017
DQ396385_2(DQ396385|pid:none) HIV-1 isolate 03ZAPS051MB1 from So...    45   0.017
AY371169_2(AY371169|pid:none) HIV-1 isolate 02CM.1918LE from Cam...    45   0.017
FJ183702_1(FJ183702|pid:none) HIV-1 isolate 5150 from Germany in...    45   0.017
FJ554724_1(FJ554724|pid:none) HIV-1 isolate W51 from Australia i...    45   0.017
AJ519488_1(AJ519488|pid:none) Human immunodeficiency virus type ...    45   0.017
EU618340_1(EU618340|pid:none) HIV-1 isolate 980-26 from Cameroon...    45   0.017
FJ199632_1(FJ199632|pid:none) HIV-1 isolate PS051 from South Afr...    45   0.017
DQ396396_2(DQ396396|pid:none) HIV-1 isolate 04ZASK193B1 from Sou...    45   0.017
AF484497_1(AF484497|pid:none) HIV-1 isolate 99UGJ27597 from Ugan...    45   0.017
FJ645453_1(FJ645453|pid:none) HIV-1 isolate TVC-67 from United K...    45   0.017
FJ469686_2(FJ469686|pid:none) HIV-1 isolate AT01480 from USA gag...    45   0.017
AF484510_1(AF484510|pid:none) HIV-1 isolate 98UG57139 from Ugand...    45   0.017
AF193276_2(AF193276|pid:none) HIV-1 CRF03_AB isolate KAL153 from...    45   0.017
DQ155042_1(DQ155042|pid:none) HIV-1 isolate MYDH021 from Kenya p...    45   0.017
EU697911_1(EU697911|pid:none) HIV-1 isolate J11245 from Saudi Ar...    45   0.017
AF484495_1(AF484495|pid:none) HIV-1 isolate 99UGG35093 from Ugan...    45   0.017
DQ354123_2(DQ354123|pid:none) HIV-1 isolate OUR2574 subtype CRF0...    45   0.017
FJ469687_2(FJ469687|pid:none) HIV-1 isolate CR0017Q from USA gag...    45   0.017
FJ554721_1(FJ554721|pid:none) HIV-1 isolate W48 from Australia i...    45   0.017
AF028075_1(AF028075|pid:none) HIV-1 isolate CMR659 from Cameroon...    44   0.022
FJ439120_2(FJ439120|pid:none) Reticuloendotheliosis virus strain...    44   0.022
DQ007902_2(DQ007902|pid:none) HIV-1 isolate 02HNsq4 from China, ...    44   0.022
(P05959) RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160G...    44   0.022
FJ388895_1(FJ388895|pid:none) HIV-1 isolate CY028 from Cyprus no...    44   0.022
AY214058_1(AY214058|pid:none) HIV-1 isolate TH1600 from Thailand...    44   0.022
EU882800_1(EU882800|pid:none) HIV-1 isolate AR04-320 from Belgiu...    44   0.022
EU618219_1(EU618219|pid:none) HIV-1 isolate 503-02 from Cameroon...    44   0.022
FJ645519_1(FJ645519|pid:none) HIV-1 isolate BR033 from Barbados ...    44   0.022
DQ375254_1(DQ375254|pid:none) HIV-1 isolate J11233 from Saudi Ar...    44   0.022
EU839607_2(EU839607|pid:none) HIV-1 isolate 00TT.CRC50018 from T...    44   0.022
DQ375273_1(DQ375273|pid:none) HIV-1 isolate J11457 from Saudi Ar...    44   0.022
EU618508_1(EU618508|pid:none) HIV-1 isolate ABB21-96 from Camero...    44   0.022
FJ183706_1(FJ183706|pid:none) HIV-1 isolate 5857 from Germany in...    44   0.022
FJ771008_2(FJ771008|pid:none) HIV-1 isolate 06BR564 from Brazil,...    44   0.022
DQ375283_1(DQ375283|pid:none) HIV-1 isolate J11471 from Saudi Ar...    44   0.022
FJ496200_2(FJ496200|pid:none) HIV-1 isolate ZM247F_flE10 from Za...    44   0.022
DQ354116_2(DQ354116|pid:none) HIV-1 isolate M081 subtype B from ...    44   0.022
AY275555_2(AY275555|pid:none) HIV-1 isolate 02HNsq4 from China g...    44   0.022
AY255827_1(AY255827|pid:none) HIV-1 isolate 99ET3 from Ethiopia ...    44   0.022
EU517888_1(EU517888|pid:none) HIV-1 isolate BEC78 from USA integ...    44   0.022
AJ564923_1(AJ564923|pid:none) Human immunodeficiency virus type ...    44   0.022
FJ388959_2(FJ388959|pid:none) HIV-1 isolate CY036 from Cyprus ga...    44   0.022
AF458235_1(AF458235|pid:none) HIV-1 isolate 92UG001 from Uganda ...    44   0.022
EU618603_1(EU618603|pid:none) HIV-1 isolate ABB157-98 from Camer...    44   0.022
FJ400004_1(FJ400004|pid:none) Simian immunodeficiency virus clon...    44   0.022
EF514708_2(EF514708|pid:none) HIV-1 isolate CTL 030 from Denmark...    44   0.022
FJ554716_1(FJ554716|pid:none) HIV-1 isolate W43 from Australia i...    44   0.022
AB287368_2(AB287368|pid:none) Human immunodeficiency virus 1 pro...    44   0.022
EU882809_1(EU882809|pid:none) HIV-1 isolate AR05-756 from Belgiu...    44   0.022
EU517891_1(EU517891|pid:none) HIV-1 isolate BEC108 from USA inte...    44   0.022
FJ786278_1(FJ786278|pid:none) HIV-1 isolate B-27 from USA integr...    44   0.022
FJ439119_2(FJ439119|pid:none) Reticuloendotheliosis virus strain...    44   0.022
AF408630_2(AF408630|pid:none) HIV-1 isolate A32989 from Argentin...    44   0.022
AF484494_1(AF484494|pid:none) HIV-1 isolate 99UGG10555 from Ugan...    44   0.022
DQ056410_2(DQ056410|pid:none) HIV-1 isolate 03ZASK107B1 from Sou...    44   0.022
FJ183559_1(FJ183559|pid:none) HIV-1 isolate 2033 from Germany in...    44   0.022
AF484504_1(AF484504|pid:none) HIV-1 isolate 98UG57130 from Ugand...    44   0.022
EU618061_1(EU618061|pid:none) HIV-1 isolate 1007-23 from Cameroo...    44   0.022
FJ554674_1(FJ554674|pid:none) HIV-1 isolate W1 from Australia in...    44   0.022
FJ645423_1(FJ645423|pid:none) HIV-1 isolate TVC-31 from Germany ...    44   0.022
DQ237901_1(DQ237901|pid:none) Reticuloendotheliosis virus isolat...    44   0.022
AY253306_2(AY253306|pid:none) HIV-1 isolate 01TZA195 from Tanzan...    44   0.022
FJ183678_1(FJ183678|pid:none) HIV-1 isolate 5836 from Germany in...    44   0.022
EU618172_1(EU618172|pid:none) HIV-1 isolate 3951-22 from Cameroo...    44   0.022
FJ397566_1(FJ397566|pid:none) Simian immunodeficiency virus clon...    44   0.022
AY560110_2(AY560110|pid:none) HIV-1 isolate 98USHVTN941c1 from U...    44   0.022
EF514700_2(EF514700|pid:none) HIV-1 isolate PMVL 013 from Denmar...    44   0.022
DQ387450_2(DQ387450|pid:none) Reticuloendotheliosis virus strain...    44   0.022
DQ354118_2(DQ354118|pid:none) HIV-1 isolate M145 subtype B from ...    44   0.022
M17451_2(M17451|pid:none) Human immunodeficiency virus type 1, i...    44   0.022
EU697912_1(EU697912|pid:none) HIV-1 isolate J11240 from Saudi Ar...    44   0.022
(Q9QBZ5) RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160G...    44   0.022
FJ183593_1(FJ183593|pid:none) HIV-1 isolate 3044 from Germany in...    44   0.022
AF362994_2(AF362994|pid:none) HIV-1 patient NP1623 from Thailand...    44   0.022
AF443100_2(AF443100|pid:none) HIV-1 isolate 00BW1880.2 from Bots...    44   0.022
FJ496195_2(FJ496195|pid:none) HIV-1 isolate ZM247F_flA1 from Zam...    44   0.022
EF057102_2(EF057102|pid:none) HIV-1 isolate Hennan clone pCNHN24...    44   0.029
AY043175_2(AY043175|pid:none) HIV-1 isolate Du422 from South Afr...    44   0.029
FJ496155_2(FJ496155|pid:none) HIV-1 isolate TRJO_flC6 from USA, ...    44   0.029
AF110972_1(AF110972|pid:none) HIV-1 isolate C-96BW12.10 country ...    44   0.029
(P18802) RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160G...    44   0.029
AY371155_2(AY371155|pid:none) HIV-1 isolate 01CM.0009BBY from Ca...    44   0.029
DQ387195_1(DQ387195|pid:none) HIV-1 isolate 149/ST2154 from Keny...    44   0.029
EU618602_1(EU618602|pid:none) HIV-1 isolate ABB151-98 from Camer...    44   0.029
FJ199947_1(FJ199947|pid:none) HIV-1 isolate SK176 from South Afr...    44   0.029
AF407627_1(AF407627|pid:none) HIV-1 patient 1664 clone 2 from Au...    44   0.029
FJ469695_2(FJ469695|pid:none) HIV-1 isolate CR0068P from USA gag...    44   0.029
AF028076_1(AF028076|pid:none) HIV-1 isolate CMR661 from Cameroon...    44   0.029
EU618415_1(EU618415|pid:none) HIV-1 isolate A1699 from Cameroon ...    44   0.029
EF472780_1(EF472780|pid:none) HIV-1 clone 59B from USA integrase...    44   0.029
AY181196_1(AY181196|pid:none) Synthetic construct HIV-1-derived ...    44   0.029
AF484489_1(AF484489|pid:none) HIV-1 isolate 99UGE23438 from Ugan...    44   0.029
EU882783_1(EU882783|pid:none) HIV-1 isolate AR02-766 from Belgiu...    44   0.029
AF484522_1(AF484522|pid:none) HIV-1 isolate 98UG57147 from Ugand...    44   0.029
DQ056416_2(DQ056416|pid:none) HIV-1 isolate 04ZASK176B1 from Sou...    44   0.029
A34828_2(A34828|pid:none) HIV-1 NDK complete sequence.  &GNLJND(...    44   0.029
FJ388945_2(FJ388945|pid:none) HIV-1 isolate CY163 from Cyprus ga...    44   0.029
AY713418_2(AY713418|pid:none) HIV-1 isolate 93UG_065 from Uganda...    44   0.029
FJ469719_2(FJ469719|pid:none) HIV-1 isolate CR0317N from USA gag...    44   0.029
EU618598_1(EU618598|pid:none) HIV-1 isolate ABB127-98 from Camer...    44   0.029
EU618616_1(EU618616|pid:none) HIV-1 isolate ABB189 from Cameroon...    44   0.029
FJ480248_1(FJ480248|pid:none) HIV-1 isolate 2387801SS from South...    44   0.029
EU882744_1(EU882744|pid:none) HIV-1 isolate AR07-2127 from Belgi...    44   0.029
FJ496075_2(FJ496075|pid:none) HIV-1 isolate 04013226_2_flC1 from...    44   0.029
FJ183562_1(FJ183562|pid:none) HIV-1 isolate 3438 from Germany in...    44   0.029
AY734560_2(AY734560|pid:none) HIV-1 isolate CO6721 from Tanzania...    44   0.029
EU618351_1(EU618351|pid:none) HIV-1 isolate A1122 from Cameroon ...    44   0.029
AF407629_1(AF407629|pid:none) HIV-1 patient 1664 clone 4 from Au...    44   0.029
FJ538981_1(FJ538981|pid:none) HIV-1 isolate H5-D0 from France in...    44   0.029
FJ786268_1(FJ786268|pid:none) HIV-1 isolate ahi1_06 from USA int...    44   0.029
FJ786400_1(FJ786400|pid:none) HIV-1 isolate ahi111_02 from USA i...    44   0.029
AY214069_1(AY214069|pid:none) HIV-1 isolate SE365 from Senegal i...    44   0.029
U69242_1(U69242|pid:none) HIV-1 strain CMR317 from Cameroon inte...    44   0.029
AF289549_2(AF289549|pid:none) HIV-1 clone 96TZ-BF071 from Tanzan...    44   0.029
DQ366665_2(DQ366665|pid:none) HIV-1 isolate 04MYKL019.1 from Mal...    44   0.029
U69219_1(U69219|pid:none) HIV-1 strain CMR158 from Cameroon inte...    44   0.029
DQ138976_1(DQ138976|pid:none) HIV-1 isolate patient 04BRRJ135 fr...    44   0.029
AY967803_2(AY967803|pid:none) HIV-1 isolate YNRL9613 from China,...    44   0.029
AF484516_1(AF484516|pid:none) HIV-1 isolate 99UGJ32228 from Ugan...    44   0.029
FJ645536_1(FJ645536|pid:none) HIV-1 isolate TVC-100 from United ...    44   0.029
FJ786395_1(FJ786395|pid:none) HIV-1 isolate mdr10 from USA integ...    44   0.029
EF633445_2(EF633445|pid:none) HIV-1 isolate R1 from South Africa...    44   0.029
A07108_2(A07108|pid:none) Human immunodeficiency virus type 1 (L...    44   0.029
AF457055_2(AF457055|pid:none) HIV-1 isolate 00KE_KER2012 from Ke...    44   0.029
FM165200_2(FM165200|pid:none) Simian immunodeficiency virus - ol...    44   0.029
AF484483_1(AF484483|pid:none) HIV-1 isolate 99UGB32394 from Ugan...    44   0.029
DQ358806_2(DQ358806|pid:none) HIV-1 isolate 02BR005 from Brazil,...    44   0.029
FJ183518_1(FJ183518|pid:none) HIV-1 isolate 13-E from Germany in...    44   0.029
FJ183654_1(FJ183654|pid:none) HIV-1 isolate 5011 from Germany in...    44   0.029
U69243_1(U69243|pid:none) HIV-1 strain CMR68-5 from Cameroon int...    44   0.029
AF203330_1(AF203330|pid:none) HIV-1 isolate R104 from USA integr...    44   0.029
AF484485_1(AF484485|pid:none) HIV-1 isolate 99UGD23550 from Ugan...    44   0.029
AY905599_1(AY905599|pid:none) HIV-1 isolate MCH3684C from Kenya ...    44   0.029
FJ480225_1(FJ480225|pid:none) HIV-1 isolate 99.237 from Uganda p...    44   0.029
EU618152_1(EU618152|pid:none) HIV-1 isolate 33-33 from Cameroon ...    44   0.029
AF040280_1(AF040280|pid:none) HIV-1 patient 62 ED062-3 clone fro...    44   0.029
DQ375266_1(DQ375266|pid:none) HIV-1 isolate J11441 from Saudi Ar...    44   0.029
EU618060_1(EU618060|pid:none) HIV-1 isolate 10-10 from Cameroon ...    44   0.029
AY314048_2(AY314048|pid:none) HIV-1 isolate WC10P-6 from USA, co...    44   0.029
EU618595_1(EU618595|pid:none) HIV-1 isolate ABB123-98 from Camer...    44   0.029
EU618623_1(EU618623|pid:none) HIV-1 isolate ABB208 from Cameroon...    44   0.029
AY816213_1(AY816213|pid:none) HIV-1 isolate 9196/01 from Germany...    44   0.029
EF150606_1(EF150606|pid:none) HIV-1 isolate 39462 from Brazil po...    44   0.029
FJ786341_1(FJ786341|pid:none) HIV-1 isolate R-31 from USA integr...    44   0.029
FJ388949_1(FJ388949|pid:none) HIV-1 isolate CY168 from Cyprus no...    44   0.029
AB097873_1(AB097873|pid:none) Human immunodeficiency virus 1 pro...    44   0.029
FJ829072_1(FJ829072|pid:none) HIV-2 isolate SP-2p2-175 from Spai...    44   0.029
FJ645436_1(FJ645436|pid:none) HIV-1 isolate TVC-46 from United K...    44   0.029
K03454_2(K03454|pid:none) Human immunodeficiency virus type 1, i...    44   0.029
AF289548_2(AF289548|pid:none) HIV-1 clone 96TZ-BF061 from Tanzan...    44   0.029
DQ848145_1(DQ848145|pid:none) HIV-1 isolate J11244 from Saudi Ar...    44   0.029
FJ183679_1(FJ183679|pid:none) HIV-1 isolate 1056 from Germany in...    44   0.029
FJ199647_1(FJ199647|pid:none) HIV-1 isolate PS066 from South Afr...    44   0.029
FJ480318_1(FJ480318|pid:none) HIV-1 isolate ABB208 from Cameroon...    44   0.029
AY901973_2(AY901973|pid:none) HIV-1 isolate 04ZASK140B1 from Sou...    44   0.029
AY138269_1(AY138269|pid:none) Simian immunodeficiency virus isol...    44   0.029
EU618104_1(EU618104|pid:none) HIV-1 isolate 173-30 from Cameroon...    44   0.029
AF484505_1(AF484505|pid:none) HIV-1 isolate 98UG57131 from Ugand...    44   0.029
FJ786385_1(FJ786385|pid:none) HIV-1 isolate mdr2 from USA integr...    44   0.029
AY180905_2(AY180905|pid:none) HIV-1 isolate CNHN24 subtype B-Tha...    44   0.029
EF535993_2(EF535993|pid:none) Simian immunodeficiency virus isol...    44   0.029
FJ496076_2(FJ496076|pid:none) HIV-1 isolate 04013226_2_flD12 fro...    44   0.029
FJ397556_1(FJ397556|pid:none) Simian immunodeficiency virus clon...    44   0.029
FJ399934_1(FJ399934|pid:none) Simian immunodeficiency virus clon...    44   0.029
FJ183597_1(FJ183597|pid:none) HIV-1 isolate 3587 from Germany in...    44   0.029
DQ396375_2(DQ396375|pid:none) HIV-1 isolate 03ZAPS066MB2 from So...    44   0.029
AF040279_1(AF040279|pid:none) HIV-1 patient 62 ED062-2 clone fro...    44   0.029
U69244_1(U69244|pid:none) HIV-1 strain CMR68-1 from Cameroon int...    44   0.029
AF484499_1(AF484499|pid:none) HIV-1 isolate 99UGK09958 from Ugan...    44   0.029
DQ011179_2(DQ011179|pid:none) HIV-1 isolate 04ZASK159B1 from Sou...    44   0.029
FJ397797_1(FJ397797|pid:none) Simian immunodeficiency virus clon...    44   0.038
FJ480272_1(FJ480272|pid:none) HIV-1 isolate ABB021-96 from Camer...    44   0.038
FJ645513_1(FJ645513|pid:none) HIV-1 isolate BR025-1 from Barbado...    44   0.038
EF029069_2(EF029069|pid:none) HIV-1 isolate U.NL.01.H10986_C11 f...    44   0.038
EU618223_1(EU618223|pid:none) HIV-1 isolate 516-15 from Cameroon...    44   0.038
FJ480278_1(FJ480278|pid:none) HIV-1 isolate ABB033-96 from Camer...    44   0.038
AY835756_2(AY835756|pid:none) HIV-1 isolate 5157-86 clone pbf11 ...    44   0.038
M22639_2(M22639|pid:none) Human immunodeficiency virus type 1, i...    44   0.038
EU618538_1(EU618538|pid:none) HIV-1 isolate ABB51-96 from Camero...    44   0.038
AF361879_2(AF361879|pid:none) HIV-1 isolate 97TZ09 from Tanzania...    44   0.038
AY835758_2(AY835758|pid:none) HIV-1 isolate 5113-87 clone pbf13 ...    44   0.038
AF395547_1(AF395547|pid:none) HIV-1 isolate 302-21 from China in...    44   0.038
EU170137_2(EU170137|pid:none) HIV-1 isolate luBF_21.06 from Luxe...    44   0.038
FJ554704_1(FJ554704|pid:none) HIV-1 isolate W31 from Australia i...    44   0.038
EU618369_1(EU618369|pid:none) HIV-1 isolate A1227 from Cameroon ...    44   0.038
AY371158_2(AY371158|pid:none) HIV-1 isolate 02CM.0016BBY from Ca...    44   0.038
U67038_1(U67038|pid:none) HIV-1 strain GH3 from Ghana, pol prote...    44   0.038
EU517868_1(EU517868|pid:none) HIV-1 isolate BEC36 from USA integ...    44   0.038
EU618470_1(EU618470|pid:none) HIV-1 isolate AB1064 from Cameroon...    44   0.038
DQ275660_2(DQ275660|pid:none) HIV-1 isolate 03ZASK013B2 from Sou...    44   0.038
FJ401938_1(FJ401938|pid:none) Simian immunodeficiency virus clon...    44   0.038
DQ056408_2(DQ056408|pid:none) HIV-1 isolate 03ZASK117B1 from Sou...    44   0.038
DQ826726_2(DQ826726|pid:none) HIV-1 isolate 101BA from Cameroon ...    44   0.038
FJ554679_1(FJ554679|pid:none) HIV-1 isolate W6 from Australia in...    44   0.038
EU735536_2(EU735536|pid:none) HIV-1 isolate 03BRRJ327 from Brazi...    44   0.038
EU883850_1(EU883850|pid:none) HIV-1 isolate Pt21Y1995 from Spain...    44   0.038
AY835752_2(AY835752|pid:none) HIV-1 clone np5 from USA gag prote...    44   0.038
EF150597_1(EF150597|pid:none) HIV-1 isolate 01GOB031 from Brazil...    44   0.038
EU170141_2(EU170141|pid:none) HIV-1 isolate luBF_20.06 from Luxe...    44   0.038
DQ375268_1(DQ375268|pid:none) HIV-1 isolate J11451 from Saudi Ar...    44   0.038
EF150603_1(EF150603|pid:none) HIV-1 isolate 38154 from Brazil po...    44   0.038
DQ056404_2(DQ056404|pid:none) HIV-1 isolate 03ZASK111B1 from Sou...    44   0.038
EU618411_1(EU618411|pid:none) HIV-1 isolate A1657 from Cameroon ...    44   0.038
AF457059_2(AF457059|pid:none) HIV-1 isolate 99KE_KISII5003 from ...    44   0.038
EU839602_2(EU839602|pid:none) HIV-1 isolate 05HT.129389 from Hai...    44   0.038
AY304496_1(AY304496|pid:none) HIV-1 isolate 99UGA08483 from Ugan...    44   0.038
(Q9QBZ1) RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160G...    44   0.038
FJ645512_1(FJ645512|pid:none) HIV-1 isolate BR024 from Barbados ...    44   0.038
EF029068_2(EF029068|pid:none) HIV-1 isolate U.NL.01.H10986_D1 fr...    44   0.038
EF029066_2(EF029066|pid:none) HIV-1 isolate U.NL.95.H10986_D1 fr...    44   0.038
DQ375270_1(DQ375270|pid:none) HIV-1 isolate J11454 from Saudi Ar...    44   0.038
FJ645488_1(FJ645488|pid:none) HIV-1 isolate TVC-82 from United K...    44   0.038
FJ469766_2(FJ469766|pid:none) HIV-1 isolate PRLS28 from USA gag ...    44   0.038
EU618520_1(EU618520|pid:none) HIV-1 isolate ABB33-96 from Camero...    44   0.038
(P03360) RecName: Full=Pol polyprotein; Contains:   RecName: Ful...    44   0.038
L16970_1(L16970|pid:none) Human immunodeficiency virus type 2 po...    44   0.038
EU618476_1(EU618476|pid:none) HIV-1 isolate AB1091 from Cameroon...    44   0.038
FJ183544_1(FJ183544|pid:none) HIV-1 isolate 21-E from Germany in...    44   0.038
EU697908_2(EU697908|pid:none) HIV-1 isolate J11451 from Saudi Ar...    44   0.038
FJ554766_1(FJ554766|pid:none) HIV-1 isolate W93 from Australia i...    44   0.038
EF514712_2(EF514712|pid:none) HIV-1 isolate CTL 043 from Denmark...    44   0.038
FJ645500_1(FJ645500|pid:none) HIV-1 isolate BR008 from Barbados ...    44   0.038
FJ645537_1(FJ645537|pid:none) HIV-1 isolate TVC-101 from United ...    44   0.038
FJ199852_1(FJ199852|pid:none) HIV-1 isolate SK013 from South Afr...    44   0.038
AJ249237_2(AJ249237|pid:none) Human immunodeficiency virus type ...    44   0.038
FJ554722_1(FJ554722|pid:none) HIV-1 isolate W49 from Australia i...    44   0.038
AF484502_1(AF484502|pid:none) HIV-1 isolate 98UG57128 from Ugand...    44   0.038
AY314054_2(AY314054|pid:none) HIV-1 isolate WC10C-1 from USA, co...    44   0.038
FJ199898_1(FJ199898|pid:none) HIV-1 isolate SK111 from South Afr...    44   0.038
L16971_1(L16971|pid:none) Human immunodeficiency virus type 2 po...    44   0.038
EU618090_1(EU618090|pid:none) HIV-1 isolate 147-19 from Cameroon...    44   0.038
EU883892_1(EU883892|pid:none) HIV-1 isolate Pt34Y2005 from Spain...    44   0.038
FJ786363_1(FJ786363|pid:none) HIV-1 isolate ahi95_04 from USA in...    44   0.038
AF115393_2(AF115393|pid:none) Simian immunodeficiency virus stra...    44   0.038
DQ493647_7(DQ493647|pid:none) Zea mays cultivar NalTel bz locus ...    44   0.038
FJ183682_1(FJ183682|pid:none) HIV-1 isolate 2909 from Germany in...    44   0.038
AB428555_2(AB428555|pid:none) Human immunodeficiency virus 1 gen...    44   0.038
AY325816_11(AY325816|pid:none) Zea mays BAC clone Z013I05, compl...    44   0.038
AY779559_2(AY779559|pid:none) HIV-1 isolate CANC2FULL from Canad...    44   0.038
EF029067_2(EF029067|pid:none) HIV-1 isolate U.NL.95.H10986_B6 fr...    44   0.038
AY905598_1(AY905598|pid:none) HIV-1 isolate MCH3656C from Kenya ...    44   0.038
FJ554727_1(FJ554727|pid:none) HIV-1 isolate W54 from Australia i...    44   0.038
(P12499) RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160G...    44   0.038
EF150613_1(EF150613|pid:none) HIV-1 isolate 465249 from Brazil p...    44   0.038
AF407640_1(AF407640|pid:none) HIV-1 isolate patient 1666 clone 4...    44   0.038
AF377956_2(AF377956|pid:none) HIV-1 isolate CM53657 from Cameroo...    44   0.038
DQ493649_5(DQ493649|pid:none) Zea mays cultivar Coroico bz locus...    44   0.038
DQ460686_1(DQ460686|pid:none) HIV-1 clone KE1448p-c7 from Kenya ...    44   0.038
EU618320_1(EU618320|pid:none) HIV-1 isolate 884-33 from Cameroon...    44   0.038
EU618235_1(EU618235|pid:none) HIV-1 isolate 537-32 from Cameroon...    44   0.038
FJ786304_1(FJ786304|pid:none) HIV-1 isolate G-4 from USA integra...    44   0.038
FJ645497_1(FJ645497|pid:none) HIV-1 isolate BR006 from Barbados ...    44   0.038
FJ786364_1(FJ786364|pid:none) HIV-1 isolate ahi96_03 from USA in...    44   0.038
AF458234_1(AF458234|pid:none) HIV-1 isolate B0412 from Kenya int...    44   0.038
FJ647161_1(FJ647161|pid:none) HIV-1 isolate TV480 from South Afr...    43   0.049
EU110096_2(EU110096|pid:none) HIV-1 isolate ML1979PCR from Kenya...    43   0.049
EF514701_1(EF514701|pid:none) HIV-1 isolate PMVL 049 from Denmar...    43   0.049
FJ199635_1(FJ199635|pid:none) HIV-1 isolate PS054 from South Afr...    43   0.049
FJ469763_2(FJ469763|pid:none) HIV-1 isolate PRLS19 from USA gag ...    43   0.049
AF457067_2(AF457067|pid:none) HIV-1 isolate 00KE_KNH1199 from Ke...    43   0.049
EU664582_1(EU664582|pid:none) HIV-1 isolate YBF244 from Cameroon...    43   0.049
DQ056405_2(DQ056405|pid:none) HIV-1 isolate 04ZASK164B1 from Sou...    43   0.049
AB254155_2(AB254155|pid:none) Human immunodeficiency virus 1 pro...    43   0.049
FJ183541_1(FJ183541|pid:none) HIV-1 isolate 44-E from Germany in...    43   0.049
AY255823_1(AY255823|pid:none) HIV-1 isolate 99ET1 from Ethiopia ...    43   0.049
FJ554748_1(FJ554748|pid:none) HIV-1 isolate W75 from Australia i...    43   0.049
DQ370417_1(DQ370417|pid:none) Simian immunodeficiency virus isol...    43   0.049
FJ402025_1(FJ402025|pid:none) Simian immunodeficiency virus clon...    43   0.049
EU517894_1(EU517894|pid:none) HIV-1 isolate BEC106 from USA inte...    43   0.049
EU839600_2(EU839600|pid:none) HIV-1 isolate 05HT.129517 from Hai...    43   0.049
AY882421_2(AY882421|pid:none) HIV-1 isolate 9196/01 from Germany...    43   0.049
DQ387193_1(DQ387193|pid:none) HIV-1 isolate 147/ST2152 from Keny...    43   0.049
DQ387089_1(DQ387089|pid:none) HIV-1 isolate 27/ST2032 from Kenya...    43   0.049
AF457065_2(AF457065|pid:none) HIV-1 isolate 99KE_KNH1135 from Ke...    43   0.049
DQ358812_2(DQ358812|pid:none) HIV-1 isolate 02BR034 from Brazil,...    43   0.049
FJ388897_2(FJ388897|pid:none) HIV-1 isolate CY031 from Cyprus ga...    43   0.049
AY905596_1(AY905596|pid:none) HIV-1 isolate MCH2266J from Kenya ...    43   0.049
EU882791_1(EU882791|pid:none) HIV-1 isolate AR07-1637 from Belgi...    43   0.049
AY308761_2(AY308761|pid:none) HIV-1 isolate 1299_d22 from USA, c...    43   0.049
AF443075_2(AF443075|pid:none) HIV-1 isolate 96BWMO3.2 from Botsw...    43   0.049
AF458240_1(AF458240|pid:none) HIV-1 isolate M539 from Kenya inte...    43   0.049
AY704534_1(AY704534|pid:none) HIV-1 isolate STD860C1 from Kenya ...    43   0.049
FJ183493_1(FJ183493|pid:none) HIV-1 isolate 47-E from Germany in...    43   0.049
EU110091_2(EU110091|pid:none) HIV-1 isolate ML1979 from Kenya, c...    43   0.049
EU618362_1(EU618362|pid:none) HIV-1 isolate A1220 from Cameroon ...    43   0.049
AY463234_2(AY463234|pid:none) HIV-1 isolate C.ZA.1197MB from Sou...    43   0.049
EU110097_2(EU110097|pid:none) HIV-1 isolate ML1990PCR from Kenya...    43   0.049
L09211_2(L09211|pid:none) Simian immunodeficiency virus variant ...    43   0.049
AF484498_1(AF484498|pid:none) HIV-1 isolate 99UGK09259 from Ugan...    43   0.049
FJ388900_1(FJ388900|pid:none) HIV-1 isolate CY038 from Cyprus no...    43   0.049
EF150562_1(EF150562|pid:none) HIV-1 isolate 01BAB080 from Brazil...    43   0.049
DQ093596_2(DQ093596|pid:none) HIV-1 isolate 03ZASK212B1 from Sou...    43   0.049
AF458241_1(AF458241|pid:none) HIV-1 isolate B102 from Kenya inte...    43   0.049
EU883904_1(EU883904|pid:none) HIV-1 isolate Pt40Y2005 from Spain...    43   0.049
EU517874_1(EU517874|pid:none) HIV-1 isolate BEC49 from USA integ...    43   0.049
EF150564_1(EF150564|pid:none) HIV-1 isolate 01BAB093 from Brazil...    43   0.049
AY771592_2(AY771592|pid:none) HIV-1 isolate BREPM275 from Brazil...    43   0.049
FJ786272_1(FJ786272|pid:none) HIV-1 isolate ahi5_03 from USA int...    43   0.049
DQ387192_1(DQ387192|pid:none) HIV-1 isolate 146/ST2151 from Keny...    43   0.049
AF457062_2(AF457062|pid:none) HIV-1 isolate 99KE_KNH1043 from Ke...    43   0.049
AY734558_2(AY734558|pid:none) HIV-1 isolate CO3305 from Tanzania...    43   0.049
DQ373063_2(DQ373063|pid:none) Simian immunodeficiency virus isol...    43   0.049
DQ387100_1(DQ387100|pid:none) HIV-1 isolate 39/ST2044 from Kenya...    43   0.049
FJ786296_1(FJ786296|pid:none) HIV-1 isolate ahi29_01 from USA in...    43   0.049
AY878060_2(AY878060|pid:none) HIV-1 isolate 03ZASK097B1 from Sou...    43   0.049
AF395553_1(AF395553|pid:none) HIV-1 isolate 302-02 from Ghana in...    43   0.049
FJ554699_1(FJ554699|pid:none) HIV-1 isolate W26 from Australia i...    43   0.049
EU664581_1(EU664581|pid:none) HIV-1 isolate YBF243 from Cameroon...    43   0.049
EF472725_1(EF472725|pid:none) HIV-1 clone 4B from USA integrase ...    43   0.049
AJ302647_1(AJ302647|pid:none) Human immunodeficiency virus type ...    43   0.049
FJ645531_1(FJ645531|pid:none) HIV-1 isolate BR048 from Barbados ...    43   0.049
AY734556_2(AY734556|pid:none) HIV-1 isolate CO178 from Tanzania,...    43   0.049
AY713416_2(AY713416|pid:none) HIV-1 isolate 90SE_364 from Senega...    43   0.049
FJ480245_1(FJ480245|pid:none) HIV-1 isolate 39462 from Brazil po...    43   0.049
AY214066_1(AY214066|pid:none) HIV-1 isolate UG268 from Uganda in...    43   0.049
FJ645480_1(FJ645480|pid:none) HIV-1 isolate BR-053 from Barbados...    43   0.049
AF414006_2(AF414006|pid:none) HIV-1 isolate 98BY10443 from Belar...    43   0.049
DQ396395_2(DQ396395|pid:none) HIV-1 isolate 03ZASK104B1 from Sou...    43   0.049
EU618078_1(EU618078|pid:none) HIV-1 isolate 124-33 from Cameroon...    43   0.049
EF637049_2(EF637049|pid:none) HIV-1 isolate BREPM1035 from Brazi...    43   0.049
AF407581_1(AF407581|pid:none) HIV-1 patient 1052 clone 1 from Au...    43   0.049
L03295_2(L03295|pid:none) Simian immunodeficiency PBJ virus non-...    43   0.049
FJ400718_1(FJ400718|pid:none) Simian immunodeficiency virus clon...    43   0.049
AF110961_1(AF110961|pid:none) HIV-1 isolate C-96BW01B22 country ...    43   0.049
AF457069_2(AF457069|pid:none) HIV-1 isolate 00KE_KNH1209 from Ke...    43   0.049
AF457087_2(AF457087|pid:none) HIV-1 isolate 00KE_MSA4080 from Ke...    43   0.049
AF110962_1(AF110962|pid:none) HIV-1 isolate C-96BW04.02 country ...    43   0.049
DQ093605_2(DQ093605|pid:none) HIV-1 isolate 04ZASK234B1 from Sou...    43   0.049
FJ195091_1(FJ195091|pid:none) HIV-1 isolate BREPM1081 from Brazi...    43   0.049
AF484521_1(AF484521|pid:none) HIV-1 isolate 98UG57137 from Ugand...    43   0.049
DQ396387_2(DQ396387|pid:none) HIV-1 isolate 04ZASK165B1 from Sou...    43   0.049
DQ387103_1(DQ387103|pid:none) HIV-1 isolate 42/ST2047 from Kenya...    43   0.049
AY371170_2(AY371170|pid:none) HIV-1 isolate 01CM.0908MO from Cam...    43   0.049
FJ199751_1(FJ199751|pid:none) HIV-1 isolate PS193 from South Afr...    43   0.049
AM279375_1(AM279375|pid:none) Human immunodeficiency virus 1 pro...    43   0.049
DQ375257_1(DQ375257|pid:none) HIV-1 isolate J11239 from Saudi Ar...    43   0.049
FJ397856_1(FJ397856|pid:none) Simian immunodeficiency virus clon...    43   0.049
DQ990880_2(DQ990880|pid:none) HIV-1 isolate 05CNHB_hp3 from Chin...    43   0.049
EF514710_2(EF514710|pid:none) HIV-1 isolate CTL 035 from Denmark...    43   0.049
AY214071_1(AY214071|pid:none) HIV-1 isolate UG274 from Uganda in...    43   0.049
EF472781_1(EF472781|pid:none) HIV-1 clone 60B from USA integrase...    43   0.049
(Q1A267) RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160G...    43   0.049
EU110092_2(EU110092|pid:none) HIV-1 isolate ML1990 from Kenya, c...    43   0.049
EU618467_1(EU618467|pid:none) HIV-1 isolate A1806 from Cameroon ...    43   0.049
DQ383754_2(DQ383754|pid:none) HIV-1 isolate 04AR160677 from Arge...    43   0.049
DQ375275_1(DQ375275|pid:none) HIV-1 isolate J11460 from Saudi Ar...    43   0.049
AY352654_2(AY352654|pid:none) HIV-1 isolate SE8646 from Sweden, ...    43   0.049
EU883877_1(EU883877|pid:none) HIV-1 isolate Pt30Y1999 from Spain...    43   0.049
AY704474_1(AY704474|pid:none) HIV-1 isolate STD788C2 from Kenya ...    43   0.049
EU616646_2(EU616646|pid:none) HIV-1 isolate AC160_T8_5'_Day_860_...    43   0.049
FJ786303_1(FJ786303|pid:none) HIV-1 isolate G-8 from USA integra...    43   0.049
FJ199866_1(FJ199866|pid:none) HIV-1 isolate SK040 from South Afr...    43   0.049
DQ351235_2(DQ351235|pid:none) HIV-1 isolate 02ZAPS005MB1 from So...    43   0.049
EU616642_2(EU616642|pid:none) HIV-1 isolate AC160_T4_Day_503_Dom...    43   0.049
DQ127534_2(DQ127534|pid:none) HIV-1 isolate AC-04_0_Days_Consen....    43   0.049
AB254156_2(AB254156|pid:none) Human immunodeficiency virus 1 pro...    43   0.049
AF407583_1(AF407583|pid:none) HIV-1 patient 1052 clone 3 from Au...    43   0.049
DQ375255_1(DQ375255|pid:none) HIV-1 isolate J11237 from Saudi Ar...    43   0.049
AY214064_1(AY214064|pid:none) HIV-1 isolate SE364 from Senegal i...    43   0.049
DQ387118_1(DQ387118|pid:none) HIV-1 isolate 58/ST2063 from Kenya...    43   0.049
FJ469688_2(FJ469688|pid:none) HIV-1 isolate CR0023W from USA gag...    43   0.049
AY703911_2(AY703911|pid:none) HIV-1 isolate 04ZASK144B1 from Sou...    43   0.049
EU883876_1(EU883876|pid:none) HIV-1 isolate Pt30Y1994 from Spain...    43   0.049
FJ199903_1(FJ199903|pid:none) HIV-1 isolate SK118 from South Afr...    43   0.049
FJ400385_1(FJ400385|pid:none) Simian immunodeficiency virus clon...    43   0.049
DQ370412_1(DQ370412|pid:none) Simian immunodeficiency virus isol...    43   0.049
FJ388909_1(FJ388909|pid:none) HIV-1 isolate CY064 from Cyprus no...    43   0.049
AY703908_2(AY703908|pid:none) HIV-1 isolate 03ZASK040B1 from Sou...    43   0.049
DQ351232_2(DQ351232|pid:none) HIV-1 isolate 04ZAPS157MB1 from So...    43   0.049
FJ554763_1(FJ554763|pid:none) HIV-1 isolate W90 from Australia i...    43   0.049
DQ351237_2(DQ351237|pid:none) HIV-1 isolate 03ZASK113B1 from Sou...    43   0.049
FJ199914_1(FJ199914|pid:none) HIV-1 isolate SK137 from South Afr...    43   0.049
FJ400370_1(FJ400370|pid:none) Simian immunodeficiency virus clon...    43   0.049
AF457084_2(AF457084|pid:none) HIV-1 isolate 00KE_MSA4076 from Ke...    43   0.049
FJ183661_1(FJ183661|pid:none) HIV-1 isolate 5155 from Germany in...    43   0.049
AF503912_1(AF503912|pid:none) Danio rerio endogenous retrovirus ...    43   0.049
DQ011169_2(DQ011169|pid:none) HIV-1 isolate 03ZASK118B1 from Sou...    43   0.049
FJ183503_1(FJ183503|pid:none) HIV-1 isolate 2745 from Germany in...    43   0.049
EU618311_1(EU618311|pid:none) HIV-1 isolate 842-6 from Cameroon ...    43   0.049
AF071473_2(AF071473|pid:none) HIV-1 SE7108 from Kenya, gag prote...    43   0.049
DQ460685_1(DQ460685|pid:none) HIV-1 clone KE1448p-c12 from Kenya...    43   0.049
DQ383747_2(DQ383747|pid:none) HIV-1 isolate 02AR115455 from Arge...    43   0.049
EU882806_1(EU882806|pid:none) HIV-1 isolate AR05-390 from Belgiu...    43   0.064
FJ388922_2(FJ388922|pid:none) HIV-1 isolate CY092 from Cyprus ga...    43   0.064
FJ183636_1(FJ183636|pid:none) HIV-1 isolate 63-E from Germany in...    43   0.064
AY901978_2(AY901978|pid:none) HIV-1 isolate 04ZASK155B1 from Sou...    43   0.064
AF457063_2(AF457063|pid:none) HIV-1 isolate 99KE_KNH1088 from Ke...    43   0.064
FJ183664_1(FJ183664|pid:none) HIV-1 isolate 5223 from Germany in...    43   0.064
EF150549_1(EF150549|pid:none) HIV-1 isolate 01BAB055 from Brazil...    43   0.064
DQ445637_2(DQ445637|pid:none) HIV-1 isolate 04ZAPS198MB1 from So...    43   0.064
DQ358811_2(DQ358811|pid:none) HIV-1 isolate 02BR033 from Brazil,...    43   0.064
EU517859_1(EU517859|pid:none) HIV-1 isolate BEC1 from USA integr...    43   0.064
AF407594_1(AF407594|pid:none) HIV-1 patient 1609 clone 4 from Au...    43   0.064
AY563170_2(AY563170|pid:none) HIV-1 isolate ARG4006 from Argenti...    43   0.064
EF472779_1(EF472779|pid:none) HIV-1 clone 58B from USA integrase...    43   0.064
AY751406_2(AY751406|pid:none) HIV-1 isolate 04RU129005 from Russ...    43   0.064
FJ183560_1(FJ183560|pid:none) HIV-1 isolate 2109 from Germany in...    43   0.064
EF150551_1(EF150551|pid:none) HIV-1 isolate 01BAB057 from Brazil...    43   0.064
EF150547_1(EF150547|pid:none) HIV-1 isolate 01BAB053 from Brazil...    43   0.064
FJ397727_1(FJ397727|pid:none) Simian immunodeficiency virus clon...    43   0.064
EF150621_1(EF150621|pid:none) HIV-1 isolate 01BAB086 from Brazil...    43   0.064
EU908742_1(EU908742|pid:none) HIV-1 isolate pt1bl from Italy int...    43   0.064
AY704475_1(AY704475|pid:none) HIV-1 isolate STD860C5 from Kenya ...    43   0.064
AY734554_2(AY734554|pid:none) HIV-1 isolate CO6770 from Tanzania...    43   0.064
FJ469754_2(FJ469754|pid:none) HIV-1 isolate PRLS02 from USA trun...    43   0.064
DQ979024_2(DQ979024|pid:none) HIV-1 isolate X1670 from Spain, co...    43   0.064
DQ370405_1(DQ370405|pid:none) Simian immunodeficiency virus isol...    43   0.064
AF040278_1(AF040278|pid:none) HIV-1 patient 62 ED062-1 clone fro...    43   0.064
FJ645479_1(FJ645479|pid:none) HIV-1 isolate BR-052 from Barbados...    43   0.064
AF484514_1(AF484514|pid:none) HIV-1 isolate 98UG57143 from Ugand...    43   0.064
AF407649_1(AF407649|pid:none) HIV-1 patient 1687 clone 2 from Au...    43   0.064
EU618070_1(EU618070|pid:none) HIV-1 isolate 1129 from Cameroon p...    43   0.064
AF120201_1(AF120201|pid:none) HIV-1 CNG12 from Republic of the C...    43   0.064
DQ011171_2(DQ011171|pid:none) HIV-1 isolate 04ZASK156B1 from Sou...    43   0.064
DQ295193_2(DQ295193|pid:none) HIV-1 isolate 04KMH5 from South Ko...    43   0.064
AF443094_2(AF443094|pid:none) HIV-1 isolate 00BW1759.3 from Bots...    43   0.064
DQ207941_2(DQ207941|pid:none) HIV-1 isolate 03GEMZ033 from Georg...    43   0.064
FJ199929_1(FJ199929|pid:none) HIV-1 isolate SK155 from South Afr...    43   0.064
FJ400754_1(FJ400754|pid:none) Simian immunodeficiency virus clon...    43   0.064
DQ676884_2(DQ676884|pid:none) HIV-1 isolate PS3002_Day199 from A...    43   0.064
FJ786319_1(FJ786319|pid:none) HIV-1 isolate ahi52_98 from USA in...    43   0.064
FJ388899_1(FJ388899|pid:none) HIV-1 isolate CY037 from Cyprus no...    43   0.064
FJ183581_1(FJ183581|pid:none) HIV-1 isolate 179 from Germany int...    43   0.064
DQ460697_1(DQ460697|pid:none) HIV-1 clone KE897p-c1 from Kenya p...    43   0.064
AY773341_2(AY773341|pid:none) HIV-1 isolate D.ZA.86.R482 from So...    43   0.064
FJ554786_1(FJ554786|pid:none) HIV-1 isolate W113 from Australia ...    43   0.064
EU908743_1(EU908743|pid:none) HIV-1 isolate pt1w4 from Italy int...    43   0.064
AF458246_1(AF458246|pid:none) HIV-1 isolate M002 from Kenya inte...    43   0.064
AF443106_2(AF443106|pid:none) HIV-1 isolate 00BW2128.3 from Bots...    43   0.064
FJ786307_1(FJ786307|pid:none) HIV-1 isolate ahi40_06 from USA in...    43   0.064
EF150571_1(EF150571|pid:none) HIV-1 isolate 01BAB104 from Brazil...    43   0.064
EU882761_1(EU882761|pid:none) HIV-1 isolate AR04-1171 from Belgi...    43   0.064
FJ480233_1(FJ480233|pid:none) HIV-1 isolate 205.586 from Uganda ...    43   0.064
FJ183670_1(FJ183670|pid:none) HIV-1 isolate 5592 from Germany in...    43   0.064
AY463225_1(AY463225|pid:none) HIV-1 isolate C.ZA.1170MB from Sou...    43   0.064
EF472744_1(EF472744|pid:none) HIV-1 clone 23B from USA integrase...    43   0.064
FJ401131_1(FJ401131|pid:none) Simian immunodeficiency virus clon...    43   0.064
DQ886031_2(DQ886031|pid:none) HIV-1 isolate F703 from USA, compl...    43   0.064
EF150554_1(EF150554|pid:none) HIV-1 isolate 01BAB062 from Brazil...    43   0.064
FJ554776_1(FJ554776|pid:none) HIV-1 isolate W103 from Australia ...    43   0.064

>U57081_1(U57081|pid:none) Dictyostelium discoideum Tdd-4 transposable
            element encodes putative transposition inhibitor and
            putative transposase, complete cds.
          Length = 706

 Score =  652 bits (1682), Expect(2) = 0.0
 Identities = 358/511 (70%), Positives = 372/511 (72%)
 Frame = +3

Query: 18   MKQDKINEIINYLKFIEDNNFENTKHKNYKFLHDE*IFFLTITQSFFKF*PIKNRNRKEK 197
            MKQDKINEIINYLKFIEDNNFENTKHKNYKFLHDE                    NRKEK
Sbjct: 1    MKQDKINEIINYLKFIEDNNFENTKHKNYKFLHDE--------------------NRKEK 40

Query: 198  LFRIEKKVMNCGGDRNISKEVCLEVINDYRMVSLWEEMHKGHIGRDATYGNYKTKYYNMG 377
            LFRIEKKVMNCGGDRNISKEVCLEVINDYRMVSLWEEMHKGHIGRDATYGNYKTKYYNMG
Sbjct: 41   LFRIEKKVMNCGGDRNISKEVCLEVINDYRMVSLWEEMHKGHIGRDATYGNYKTKYYNMG 100

Query: 378  LYSFVSDAVDTCDICQRNRIKGITKDFAPIVDTEEYSRLVYDLTSIKGEHKEKVTYDDDN 557
            LYSFVSDAVDTCDICQRNRIKGITKDFAPIVDTEEYSRLVYDLTSIKGEHKEKVTYDDDN
Sbjct: 101  LYSFVSDAVDTCDICQRNRIKGITKDFAPIVDTEEYSRLVYDLTSIKGEHKEKVTYDDDN 160

Query: 558  EKILTKLDDLIQYDSVQPYDTDVVYIILCIDSFTKFATGRXXXXXXXXXXXXXXXXXXXX 737
            EKILTKLDDLIQYDSVQPYDTDVVYIILCIDSFTKFATGR
Sbjct: 161  EKILTKLDDLIQYDSVQPYDTDVVYIILCIDSFTKFATGRCLTTKRTVPIY--------- 211

Query: 738  X*MFDNKENSSHIQFFGSHVLWQTCESMALR*WT*I*KQSPKRIPKTFSRLQVSTWSSSY 917
                    N   + +FG  V    C++          ++   ++ K F +L
Sbjct: 212  --------NFLALTYFGKPVKVWHCDNG---------REFKNKVQKEFLKLFPG------ 248

Query: 918  TNNSRYGRKIESNYQGEDLKIKTTRV*YCEQYKLSICLLINHL*INFSFLDGTSRSLSEL 1097
             + S +G       QG   ++  T      + K               FLDGTSRSLSEL
Sbjct: 249  -SKSAHGAPRTPTTQGMVERLNRTIKERISKLKQQ------------DFLDGTSRSLSEL 295

Query: 1098 LKQALYDYNNTKTRTIKMTPSQAVGIVPLFINVQSEQDSQSIGVSDVSKEEITAIILENL 1277
            LKQALYDYNNTKTRTIKM PSQAVGIVPLFINVQSEQDSQSIGVSDVSKEE TAIILENL
Sbjct: 296  LKQALYDYNNTKTRTIKMKPSQAVGIVPLFINVQSEQDSQSIGVSDVSKEERTAIILENL 355

Query: 1278 TSYQNQWNSKPPKGLKVGDTVXXXXXXXXXXXXXXXXXHKVIQEDTKQLYKLEFLEDGIN 1457
            TSYQNQWNSKPPKGLKVGDTV                 HKVIQEDTKQLYKLEFLEDGIN
Sbjct: 356  TSYQNQWNSKPPKGLKVGDTVLFLEIKKNNKILILCKIHKVIQEDTKQLYKLEFLEDGIN 415

Query: 1458 SLQKKGLYSGFVGGNKLVLYKQSTVDIFRTS 1550
            SLQKKGLYSGFVGGNKLVLYKQSTVDIFRTS
Sbjct: 416  SLQKKGLYSGFVGGNKLVLYKQSTVDIFRTS 446

 Score =  246 bits (628), Expect(2) = 0.0
 Identities = 125/152 (82%), Positives = 126/152 (82%)
 Frame = +1

Query: 1552 PNIQKDIDSFTSGLYLNNDGKVIEFLVQFIKNLGKDLSNFNLHQLVTQNDPFRVLEDALX 1731
            PNIQKDIDSFTSGLYLNNDGKVIEFLVQFIKNLGKDLSNFNLHQLVTQNDPFRVLEDAL
Sbjct: 447  PNIQKDIDSFTSGLYLNNDGKVIEFLVQFIKNLGKDLSNFNLHQLVTQNDPFRVLEDALN 506

Query: 1732 XXXXXXXXXXXXXFQHKLNNEMEQEEILPFLNNNPTAPNLMNCLRQDMNLKEXXXXXXXX 1911
                         FQHKLNNEMEQEEILPFLNNNPTAPNLMNCLR+DMNLKE
Sbjct: 507  NPSNIPPIINDNPFQHKLNNEMEQEEILPFLNNNPTAPNLMNCLRKDMNLKEIVPPIPQV 566

Query: 1912 XXXXSYTIPQSGSGIVTTVKRLRGRPHKIPIV 2007
                SYTIPQSGSGIVTTVKRLRGRPHKIPIV
Sbjct: 567  QIIPSYTIPQSGSGIVTTVKRLRGRPHKIPIV 598

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 3,151,777,775
Number of extensions: 55740066
Number of successful extensions: 193864
Number of sequences better than 10.0: 4035
Number of HSP's gapped: 190983
Number of HSP's successfully gapped: 4044
Length of query: 831
Length of database: 1,061,185,681
Length adjustment: 137
Effective length of query: 694
Effective length of database: 613,408,305
Effective search space: 425705363670
Effective search space used: 425705363670
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.75  gvh: 0.31  alm: 0.48  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 32.0 %: nuclear
	 12.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: mitochondrial
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U16372-1 is cyt