Contig-U16339-1
Contig ID Contig-U16339-1
Contig update 2004. 6.11
Contig sequence
>Contig-U16339-1 (Contig-U16339-1Q) /CSM_Contig/Contig-U16339-1Q.Seq.d
ATAATAAAAACAATTTAATTTTTATTATTATTTATTTTTATTATTATTAT
TTAATTTATTTTTATTTTAATTTTTATTTTTTATTTTTATTTTTATTTTT
ATTTTTATTTTTATTTTTTATTTTTTTTTTATTAATTTTTTTTTTATTTA
TTCAATAAATTTAAATTTGATATGATAATTAGTTAATCGTAATATTATAA
TATTTACATATAAAAGAAAAAAAGAAAAAAAATTAATTAAAATAATTGAA
AAATAAAAAAAAATGTCATTTAACATACCCACAATTCATACAAATAACTC
CAAAAACGATAATAATGATGAAAATAATAATAATAATCAACACACAGAAA
ATCCATACATTTCAATAAATAATAAAATCACCCCAGAAAATAGTATCTCA
TCAAATCTTAATCAAATCGAGAAAGCTGTTAAAGTTGCCAATTCTCAAAA
CCTTGATTTAGCATTGATTGGTAATTGCTCATTTGGTGCTCTTATTGATA
AGAAATCATGCATCAAATGGTGTTGCATTCCAAGATTTGATGCAGATCCA
ATATTTTGCTCATTAGTTAGAAAATCAAATGATTCAGGTTTTTATGATGT
TGTGGTTGAAAACTTTGCATTCAGTGAGCAGGTATATATAAAAAACACAG
CGGTTTTATCAACAAAACTGTACAACACTAATGGAGGTGGTGTTGAAGTA
ATTGATTTTGCACCAAGATTCAATATGTTCTCTCGTCCATACAGACCATC
AATGATTATTAGAGTCATTAAGCCATTGGGCCATTGTAGAATTAAGATTA
GACTAAGACCAACATTCGGTTATGGATGGGGTGCACCAGAAAAAACCAGA
GGTACAAACCATATAAGATATATATTACCATCAATGGTAATGAGACTTAC
AACCAATGCTCCAATTTCATATATTGTTGATGAAGTTTTATTTGAAGCTG
ATGAAACATTATACTTTGTATTTATGGCTGATGAAAGTTTAAGAGAATCC
CTTCATGATGTTACCAATACTTATTTGGATAAAACAATTGAATATTGGCA
AGAATATACTAAATCATTAGCTATTCCACTTGAATGGCAATCACAAGTTT
TAAGAGCATGTATTACTGTAAAACTTTGCCAATTTGAAGAATCTGGTGCC
ATTATTGCATCATTAACAACATCAATCCCAGAAGAACCAACTAAAGAAGG
TTATGATCTTAGATTTTGTTGGATTAGAGATACTTCTTATATTGTACATA
CATTCAACAAACTTGGTAATACAAAGATGATGGAAGATTTCCTTACTTAC
ATTTCAAACATTGTCTCAGGTTCATTGGAAAGAGGTGGATTCCTTCAACC
AGTTTATGGTATTTCATTAGAAACAAAACTCTATGAAAAGTCAATGTATA
GACTTGCAGGTTACAGAGGTCTTGGTCCTGTTAAAATTGGTACAAGAGAT
TATAAAACAATTCAAAATGATGTTTATGGTCAATTAATTTTAGCATCTAT
TCAAATGTTTTTTGATCAAAGATTAAATAAACCAGGTGATATTCATTTAT
TCCATAAATTAGAAGGTTTAGGTATGCAAAGCATATACAAATTATAATAA
ACCAGATTGTGGTCCATTAGGTAAAGGTTCAATTGAAGATGGTAAAATTT
ATACATTTTCATCATTTATGTGTTGGACAGGTTGTGATAGATTAGCAAAG
ATTGCAAAGAGTTTAAAGATTCCATTACGTGCACATTTCTGGCAAGAATC
TGCAAATAAAATCAAGGAAGAAATGATGGAACGTTGCTTCAACAAGGAAA
AGAATTCATTTGTATCAACTTGGGATGGAGATGATGTTGATCCTTACCTT
TTATTGATTGCAGAATCTGGATTCACTAAAATTGATGATCCAAAATTCAT
TGGAACCGTTGAATATTTAGAGAAAAAACTTAGAAGAGGCAAATACATTA
TTCAATCACCAGACAGTGTTAGTGCATCAACTACATTCACTCTCTACTAT
ATTTCTTGTATTGCTAAAATGGGTAGAAAAGAAGAAGCAAGAGAACTTTT
TGAAAATATCCTTAATGATTGCACTCCATTGGGTTTAATTAGTCAAGATG
TTAACCTTGAAACCAAAGAAATTTGGGGTAACTTTCCAAAAACAACTTCA
ATGGTTGGTATAATTAATGCTGCTATTTGTTTAAGTAAACCATGGGAATC
TGAAATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAACAA
ATTCCATTATTTTTCATTTTCCAATTTTTCATTATCTTTAGATATATAAT
TAAAATATTTTTTTTTTAGTATTAATCAAATAAATAAACAAAACAAAATT
TAAAATTTAAAAAAAAAAAAAAAAAAAAA

Gap no gap
Contig length 2379
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 6319426
End point 6321784
Strand (PLUS/MINUS) PLUS
Number of clones 120
Number of EST 216
Link to clone list U16339
List of clone(s)

est1=AHE881F,-9,599
est2=CHL645F,1,182
est3=CHL211F,49,233
est4=CHK651F,58,460
est5=AFO689F,114,328
est6=AFH423F,129,658
est7=CHB367F,129,650
est8=AFA132F,133,789
est9=AHM143F,133,761
est10=CFG675F,134,624
est11=CFI382F,134,719
est12=CHK108F,134,624
est13=SFE580F,134,712
est14=CHN501F,140,658
est15=CHD857F,142,730
est16=SFC821F,145,687
est17=AFJ217F,146,680
est18=AFN721F,146,683
est19=AFN819F,146,776
est20=CFB615F,146,698
est21=CFC342F,146,774
est22=CFH607F,146,770
est23=CFH882F,146,775
est24=CFI825F,146,775
est25=CHG286F,146,601
est26=CHK105F,146,680
est27=CHK640F,146,690
est28=CHM569F,146,598
est29=CHQ439F,146,598
est30=CHR539F,146,685
est31=SFC238F,146,777
est32=SFE512F,146,775
est33=SFJ369F,146,680
est34=CFD483F,147,770
est35=CFH752F,147,651
est36=SFB719F,147,621
est37=CFB478F,148,648
est38=CFD382F,148,775
est39=CHI312F,148,685
est40=AFF401F,150,805
est41=AFG158F,150,770
est42=AFO211F,150,777
est43=AHB366F,150,692
est44=CFD645F,150,771
est45=CFE768F,150,630
est46=CFE869F,150,775
est47=CHK526F,150,680
est48=SFJ650F,150,774
est49=CHQ776F,151,758
est50=AFE468F,154,774
est51=AHC862F,154,686
est52=AHF801F,154,687
est53=CHF540F,154,689
est54=AFD492F,157,427
est55=AFF466F,157,783
est56=CHM882F,157,685
est57=AHC179F,158,756
est58=SFI187F,160,685
est59=AFF877F,162,776
est60=AFG659F,162,774
est61=AFH652F,163,775
est62=CFI725F,163,773
est63=CHQ285F,163,645
est64=AFD766F,169,775
est65=CHO353F,171,710
est66=AHL508F,172,776
est67=CFF243F,172,770
est68=CHB717F,174,715
est69=SFG787F,175,679
est70=SSL509F,176,799
est71=AFC361F,177,649
est72=AFC605F,177,769
est73=CFB438F,177,830
est74=CHA592F,177,732
est75=CHS123F,177,795
est76=SFK608F,177,686
est77=AFF795F,181,774
est78=CFJ567F,181,774
est79=CHO238F,181,776
est80=CFK455F,184,776
est81=AFG420F,185,898
est82=AHO510F,185,688
est83=SFF452F,185,546
est84=CHN714F,186,798
est85=CHM133F,188,684
est86=AFB568F,189,769
est87=CFD105F,191,771
est88=AHB503F,203,760
est89=CHB817F,213,351
est90=CFA256F,215,688
est91=SSH694F,226,515
est92=SFC769F,244,850
est93=CHC496F,245,776
est94=SFK556F,267,652
est95=CFB307F,324,657
est96=CFJ243F,394,1016
est97=CFC233F,400,758
est98=AFB833F,433,1069
est99=CFF343F,553,1184
est100=SFF738F,578,1178
est101=SFC431F,918,1326
est102=SFL275F,920,1407
est103=SLI403F,1032,1362
est104=SFE257F,1109,1563
est105=CHA192Z,1128,1730
est106=SSH243F,1372,1902
est107=AFF466Z,1429,2189
est108=CFJ243Z,1429,2209
est109=CHE865Z,1429,2092
est110=CHQ776Z,1429,2082
est111=AFJ217Z,1430,2152
est112=AHM143Z,1430,2193
est113=CHN714Z,1430,2082
est114=CFF343Z,1431,2203
est115=CFJ567Z,1432,2207
est116=CFE869Z,1433,2203
est117=AFD766Z,1438,2152
est118=CFI825Z,1438,2207
est119=SFC238Z,1438,2146
est120=SFE512Z,1438,2187
est121=AFG659Z,1439,2189
est122=AFN819Z,1439,2152
est123=CFI725Z,1439,2207
est124=CFK455Z,1439,2210
est125=CHI312Z,1439,2207
est126=CHM569Z,1439,2185
est127=SFG243Z,1439,2104
est128=AFH652Z,1441,2152
est129=CHM133Z,1441,2207
est130=SFK608Z,1441,2187
est131=AFE468Z,1442,2189
est132=AFI729Z,1442,2189
est133=CHB367Z,1443,2207
est134=CHM882Z,1443,2073
est135=AHC862Z,1444,2061
est136=CHP846Z,1444,1691
est137=CFC342Z,1445,2201
est138=AFB568Z,1457,2152
est139=CFC233Z,1460,2104
est140=AFO689Z,1463,2152
est141=CFB307Z,1464,2167
est142=AFC605Z,1465,2152
est143=AHF801Z,1465,2193
est144=AHB366Z,1466,2193
est145=SFG787Z,1466,2185
est146=AHB503Z,1467,2193
est147=AHC179Z,1467,2189
est148=SFI187Z,1467,2088
est149=AFB833Z,1469,2152
est150=CFH882Z,1469,2167
est151=CHG286Z,1469,2082
est152=CHL211Z,1469,2118
est153=CHQ439Z,1469,2183
est154=CHR539Z,1469,2118
est155=CFF243Z,1470,2201
est156=CHF540Z,1470,2207
est157=CHL864Z,1470,2209
est158=CHQ285Z,1470,2184
est159=CFI382Z,1478,2167
est160=SFJ650Z,1478,2191
est161=AFH423Z,1480,2189
est162=CHD857Z,1485,2156
est163=AHE881Z,1486,2193
est164=CHB717Z,1486,2161
est165=AFF401Z,1490,2171
est166=CHL645Z,1490,2207
est167=CHN501Z,1492,2076
est168=SFF738Z,1492,2185
est169=CHC496Z,1495,2209
est170=AFA132Z,1507,2189
est171=AFN721Z,1508,2061
est172=CFE768Z,1508,2188
est173=AFG158Z,1511,2188
est174=SFC769Z,1511,2150
est175=CHS123Z,1513,2120
est176=SFL275Z,1514,2150
est177=CFB615Z,1526,2167
est178=AFF877Z,1530,2174
est179=SFC821Z,1530,2150
est180=SFJ369Z,1536,2185
est181=CFH752Z,1541,2167
est182=SFB719Z,1541,2150
est183=SFC431Z,1541,2187
est184=CFD105Z,1552,2159
est185=CHF301Z,1552,1771
est186=SFF452Z,1553,2150
est187=AFG420Z,1562,2175
est188=CFB438Z,1567,2168
est189=CFH607Z,1575,2167
est190=AFD503Z,1601,2070
est191=CHK651Z,1606,2210
est192=CFG675Z,1608,2167
est193=CFA256Z,1609,2098
est194=AFD492Z,1611,2193
est195=AFF795Z,1612,2178
est196=CHQ314Z,1612,1785
est197=CFB478Z,1615,2168
est198=SFE257Z,1624,2150
est199=CFD382Z,1625,2202
est200=CHK526Z,1626,2210
est201=AFC361Z,1627,2171
est202=SSD792Z,1627,2225
est203=CHK640Z,1629,2207
est204=CHO353Z,1647,2167
est205=CHK105Z,1654,2209
est206=CHK108Z,1682,2101
est207=SSC471E,1697,2362
est208=AFB367Z,1741,2112
est209=SLI403Z,1752,2218
est210=CFD483Z,1807,2189
est211=SFB184Z,1911,2168
est212=SSL509Z,1925,2227
est213=SLA393E,1958,2224
est214=SSK672E,1977,2373
est215=CFD645Z,2074,2188
est216=SSH694Z,2120,2379
Translated Amino Acid sequence
**kqfnfyyylfllllfnlflf*flffififififififyfffinfffiysinlnli**l
vnrniiiftykrkkekklikiiek*KKMSFNIPTIHTNNSKNDNNDENNNNNQHTENPYI
SINNKITPENSISSNLNQIEKAVKVANSQNLDLALIGNCSFGALIDKKSCIKWCCIPRFD
ADPIFCSLVRKSNDSGFYDVVVENFAFSEQVYIKNTAVLSTKLYNTNGGGVEVIDFAPRF
NMFSRPYRPSMIIRVIKPLGHCRIKIRLRPTFGYGWGAPEKTRGTNHIRYILPSMVMRLT
TNAPISYIVDEVLFEADETLYFVFMADESLRESLHDVTNTYLDKTIEYWQEYTKSLAIPL
EWQSQVLRACITVKLCQFEESGAIIASLTTSIPEEPTKEGYDLRFCWIRDTSYIVHTFNK
LGNTKMMEDFLTYISNIVSGSLERGGFLQPVYGISLETKLYEKSMYRLAGYRGLGPVKIG
TRDYKTIQNDVYGQLILASIQMFFDQRLNKPGDIHLFHKLEGLGMQSIYKL**trlwsir
*rfn*rw*nlyifiiyvldrl**iskdckefkdsitctflarick*nqgrndgtllqqgk
eficinlgwr*c*slpfidcriwih*n**skihwnr*ifrekt*krqihysitrqc*cin
yihsllyflyc*ng*krrskrtf*kyp**lhsigfn*src*p*nqrnlg*lsknnfngwy
n*ccylfk*tmgi*nfkkkkkkkkkkknnkfhyfsfsnfslsldi*lkyfffsinqinkq
nki*nlkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
iikti*flllfifiiii*fifilififyfyfyfyfyfyflfffy*fffylfnkfkfdmii
s*s*yyniyi*kkkrkkin*nn*kikknvi*hthnsyk*lqkr****k****sthrksih
fnk**nhprk*yliks*snresc*scqfskp*fsidw*lliwcsy**eimhqmvlhski*
crsnillis*kik*frfl*ccg*klciq*agiykkhsgfinktvqh*wrwc*sn*fctki
qyvlssiqtindy*sh*aigpl*n*d*tktnirlwmgctrknqrykpykiyitingnety
nqcsnfiyc**sfi*s**niilciyg**kfkrips*cyqylfg*nn*ilariy*iisyst
*maitsfksmyycktlpi*riwchyciinninprrtn*rrl*s*illd*ryflyctyiqq
tw*ykddgrfpylhfkhclrfigkrwipstslwyfirnktl*kvnv*tcrlqrswsc*nw
ykrl*nnsk*clwsinfsiysnvf*skik*tr*ysfip*irrfryakhiqiiinqivvh*
vkvqlkmvkfihfhhlcvgqvvid*qrlqrv*rfhyvhisgknlqiksrkk*wnvastrk
rihlyqlgmemmliltfy*lqnldslklmiqnsleplni*rknleeantlfnhqtvlvhq
lhslstiflvllkwvekkkqenflkislmialhwv*lvkmltlkpkkfgvtfqkqlqwlv
*lmllfv*vnhgnlkf*kkkkkkkkkkkqqiplffifqffiifryiikifff*y*snk*t
kqnlkfkkkkkkk


Frame B:
**kqfnfyyylfllllfnlflf*flffififififififyfffinfffiysinlnli**l
vnrniiiftykrkkekklikiiek*KKMSFNIPTIHTNNSKNDNNDENNNNNQHTENPYI
SINNKITPENSISSNLNQIEKAVKVANSQNLDLALIGNCSFGALIDKKSCIKWCCIPRFD
ADPIFCSLVRKSNDSGFYDVVVENFAFSEQVYIKNTAVLSTKLYNTNGGGVEVIDFAPRF
NMFSRPYRPSMIIRVIKPLGHCRIKIRLRPTFGYGWGAPEKTRGTNHIRYILPSMVMRLT
TNAPISYIVDEVLFEADETLYFVFMADESLRESLHDVTNTYLDKTIEYWQEYTKSLAIPL
EWQSQVLRACITVKLCQFEESGAIIASLTTSIPEEPTKEGYDLRFCWIRDTSYIVHTFNK
LGNTKMMEDFLTYISNIVSGSLERGGFLQPVYGISLETKLYEKSMYRLAGYRGLGPVKIG
TRDYKTIQNDVYGQLILASIQMFFDQRLNKPGDIHLFHKLEGLGMQSIYKL**trlwsir
*rfn*rw*nlyifiiyvldrl**iskdckefkdsitctflarick*nqgrndgtllqqgk
eficinlgwr*c*slpfidcriwih*n**skihwnr*ifrekt*krqihysitrqc*cin
yihsllyflyc*ng*krrskrtf*kyp**lhsigfn*src*p*nqrnlg*lsknnfngwy
n*ccylfk*tmgi*nfkkkkkkkkkkknnkfhyfsfsnfslsldi*lkyfffsinqinkq
nki*nlkkkkkk


Frame C:
nknnlifiiiyfyyyyliyfyfnfyflflflflflflffiffllifflfiq*i*i*ydn*
livil*ylhikekkkkn*lk*lknkkkchltypqfiqitpktiimmkiiiiintqkihtf
q*iikspqkivshqiliksrkllklpilktli*h*lviahlvlllirnhasngvafqdlm
qiqyfah*lenqmiqvfmmlwlktlhsvsryi*ktqrfyqqncttlmevvlk*lilhqds
icslvhtdhq*lleslshwaivelrld*dqhsvmdgvhqkkpevqti*diyyhqw**dlq
pmlqfhillmkfylklmkhytlylwlmkv*enpfmmlpiliwikqlnigknilnh*lfhl
ngnhkf*ehvll*nfanlknlvpllhh*qhqsqknqlkkvmildfvgleillilyihstn
lviqr*wkislltfqtlsqvhwkevdsfnqfmvfh*kqnsmksqcidlqvtevlvllklv
qeiikqfkmmfmvn*f*hlfkcflikd*inqvifiysin*kv*vckaytnynkpdcgplg
kgsiedgkiytfssfmcwtgcdrlakiakslkiplrahfwqesankikeemmercfnkek
nsfvstwdgddvdpyllliaesgftkiddpkfigtveylekklrrgkyiiqspdsvsast
tftlyyisciakmgrkeearelfenilndctplglisqdvnletkeiwgnfpkttsmvgi
inaaiclskpweseilkkkkkkkkkkkttnsiifhfpifhyl*iyn*nifflvlik*ink
tkfki*kkkkkk


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U16339-1 (Contig-U16339-1Q)
/CSM_Contig/Contig-U16339-1Q.Seq.d
(2379 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U16339-1 (Contig-U16339-1Q) /CSM_Contig/Conti... 3858 0.0
Contig-U15663-1 (Contig-U15663-1Q) /CSM_Contig/Conti... 54 1e-06
Contig-U11780-1 (Contig-U11780-1Q) /CSM_Contig/Conti... 54 1e-06
Contig-U15507-1 (Contig-U15507-1Q) /CSM_Contig/Conti... 52 4e-06
Contig-U14704-1 (Contig-U14704-1Q) /CSM_Contig/Conti... 52 4e-06
Contig-U06101-1 (Contig-U06101-1Q) /CSM_Contig/Conti... 52 4e-06
Contig-U12860-1 (Contig-U12860-1Q) /CSM_Contig/Conti... 50 2e-05
Contig-U12426-1 (Contig-U12426-1Q) /CSM_Contig/Conti... 50 2e-05
Contig-U12196-1 (Contig-U12196-1Q) /CSM_Contig/Conti... 50 2e-05
Contig-U11980-1 (Contig-U11980-1Q) /CSM_Contig/Conti... 50 2e-05

>Contig-U16339-1 (Contig-U16339-1Q) /CSM_Contig/Contig-U16339-1Q.Seq.d
Length = 2379

Score = 3858 bits (1946), Expect = 0.0
Identities = 1946/1946 (100%)
Strand = Plus / Plus


Query: 264 tgtcatttaacatacccacaattcatacaaataactccaaaaacgataataatgatgaaa 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtcatttaacatacccacaattcatacaaataactccaaaaacgataataatgatgaaa 323


Query: 324 ataataataataatcaacacacagaaaatccatacatttcaataaataataaaatcaccc 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ataataataataatcaacacacagaaaatccatacatttcaataaataataaaatcaccc 383


Query: 384 cagaaaatagtatctcatcaaatcttaatcaaatcgagaaagctgttaaagttgccaatt 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cagaaaatagtatctcatcaaatcttaatcaaatcgagaaagctgttaaagttgccaatt 443


Query: 444 ctcaaaaccttgatttagcattgattggtaattgctcatttggtgctcttattgataaga 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctcaaaaccttgatttagcattgattggtaattgctcatttggtgctcttattgataaga 503


Query: 504 aatcatgcatcaaatggtgttgcattccaagatttgatgcagatccaatattttgctcat 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aatcatgcatcaaatggtgttgcattccaagatttgatgcagatccaatattttgctcat 563


Query: 564 tagttagaaaatcaaatgattcaggtttttatgatgttgtggttgaaaactttgcattca 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tagttagaaaatcaaatgattcaggtttttatgatgttgtggttgaaaactttgcattca 623


Query: 624 gtgagcaggtatatataaaaaacacagcggttttatcaacaaaactgtacaacactaatg 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtgagcaggtatatataaaaaacacagcggttttatcaacaaaactgtacaacactaatg 683


Query: 684 gaggtggtgttgaagtaattgattttgcaccaagattcaatatgttctctcgtccataca 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gaggtggtgttgaagtaattgattttgcaccaagattcaatatgttctctcgtccataca 743


Query: 744 gaccatcaatgattattagagtcattaagccattgggccattgtagaattaagattagac 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gaccatcaatgattattagagtcattaagccattgggccattgtagaattaagattagac 803


Query: 804 taagaccaacattcggttatggatggggtgcaccagaaaaaaccagaggtacaaaccata 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 taagaccaacattcggttatggatggggtgcaccagaaaaaaccagaggtacaaaccata 863


Query: 864 taagatatatattaccatcaatggtaatgagacttacaaccaatgctccaatttcatata 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 taagatatatattaccatcaatggtaatgagacttacaaccaatgctccaatttcatata 923


Query: 924 ttgttgatgaagttttatttgaagctgatgaaacattatactttgtatttatggctgatg 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 ttgttgatgaagttttatttgaagctgatgaaacattatactttgtatttatggctgatg 983


Query: 984 aaagtttaagagaatcccttcatgatgttaccaatacttatttggataaaacaattgaat 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 aaagtttaagagaatcccttcatgatgttaccaatacttatttggataaaacaattgaat 1043


Query: 1044 attggcaagaatatactaaatcattagctattccacttgaatggcaatcacaagttttaa 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 attggcaagaatatactaaatcattagctattccacttgaatggcaatcacaagttttaa 1103


Query: 1104 gagcatgtattactgtaaaactttgccaatttgaagaatctggtgccattattgcatcat 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 gagcatgtattactgtaaaactttgccaatttgaagaatctggtgccattattgcatcat 1163


Query: 1164 taacaacatcaatcccagaagaaccaactaaagaaggttatgatcttagattttgttgga 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 taacaacatcaatcccagaagaaccaactaaagaaggttatgatcttagattttgttgga 1223


Query: 1224 ttagagatacttcttatattgtacatacattcaacaaacttggtaatacaaagatgatgg 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 ttagagatacttcttatattgtacatacattcaacaaacttggtaatacaaagatgatgg 1283


Query: 1284 aagatttccttacttacatttcaaacattgtctcaggttcattggaaagaggtggattcc 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 aagatttccttacttacatttcaaacattgtctcaggttcattggaaagaggtggattcc 1343


Query: 1344 ttcaaccagtttatggtatttcattagaaacaaaactctatgaaaagtcaatgtatagac 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1344 ttcaaccagtttatggtatttcattagaaacaaaactctatgaaaagtcaatgtatagac 1403


Query: 1404 ttgcaggttacagaggtcttggtcctgttaaaattggtacaagagattataaaacaattc 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 ttgcaggttacagaggtcttggtcctgttaaaattggtacaagagattataaaacaattc 1463


Query: 1464 aaaatgatgtttatggtcaattaattttagcatctattcaaatgttttttgatcaaagat 1523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 aaaatgatgtttatggtcaattaattttagcatctattcaaatgttttttgatcaaagat 1523


Query: 1524 taaataaaccaggtgatattcatttattccataaattagaaggtttaggtatgcaaagca 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 taaataaaccaggtgatattcatttattccataaattagaaggtttaggtatgcaaagca 1583


Query: 1584 tatacaaattataataaaccagattgtggtccattaggtaaaggttcaattgaagatggt 1643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 tatacaaattataataaaccagattgtggtccattaggtaaaggttcaattgaagatggt 1643


Query: 1644 aaaatttatacattttcatcatttatgtgttggacaggttgtgatagattagcaaagatt 1703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 aaaatttatacattttcatcatttatgtgttggacaggttgtgatagattagcaaagatt 1703


Query: 1704 gcaaagagtttaaagattccattacgtgcacatttctggcaagaatctgcaaataaaatc 1763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 gcaaagagtttaaagattccattacgtgcacatttctggcaagaatctgcaaataaaatc 1763


Query: 1764 aaggaagaaatgatggaacgttgcttcaacaaggaaaagaattcatttgtatcaacttgg 1823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1764 aaggaagaaatgatggaacgttgcttcaacaaggaaaagaattcatttgtatcaacttgg 1823


Query: 1824 gatggagatgatgttgatccttaccttttattgattgcagaatctggattcactaaaatt 1883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 gatggagatgatgttgatccttaccttttattgattgcagaatctggattcactaaaatt 1883


Query: 1884 gatgatccaaaattcattggaaccgttgaatatttagagaaaaaacttagaagaggcaaa 1943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1884 gatgatccaaaattcattggaaccgttgaatatttagagaaaaaacttagaagaggcaaa 1943


Query: 1944 tacattattcaatcaccagacagtgttagtgcatcaactacattcactctctactatatt 2003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1944 tacattattcaatcaccagacagtgttagtgcatcaactacattcactctctactatatt 2003


Query: 2004 tcttgtattgctaaaatgggtagaaaagaagaagcaagagaactttttgaaaatatcctt 2063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2004 tcttgtattgctaaaatgggtagaaaagaagaagcaagagaactttttgaaaatatcctt 2063


Query: 2064 aatgattgcactccattgggtttaattagtcaagatgttaaccttgaaaccaaagaaatt 2123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2064 aatgattgcactccattgggtttaattagtcaagatgttaaccttgaaaccaaagaaatt 2123


Query: 2124 tggggtaactttccaaaaacaacttcaatggttggtataattaatgctgctatttgttta 2183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2124 tggggtaactttccaaaaacaacttcaatggttggtataattaatgctgctatttgttta 2183


Query: 2184 agtaaaccatgggaatctgaaatttt 2209
||||||||||||||||||||||||||
Sbjct: 2184 agtaaaccatgggaatctgaaatttt 2209


Score = 167 bits (84), Expect = 1e-40
Identities = 104/114 (91%)
Strand = Plus / Plus


Query: 2245 caacaaattccattatttttcattttccaatttttcattatctttagatatataattaaa 2304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2245 caacaaattccattatttttcattttccaatttttcattatctttagatatataattaaa 2304


Query: 2305 atannnnnnnnnnagtattaatcaaataaataaacaaaacaaaatttaaaattt 2358
||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2305 atattttttttttagtattaatcaaataaataaacaaaacaaaatttaaaattt 2358


Score = 129 bits (65), Expect = 2e-29
Identities = 65/65 (100%)
Strand = Plus / Plus


Query: 146 atttattcaataaatttaaatttgatatgataattagttaatcgtaatattataatattt 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 atttattcaataaatttaaatttgatatgataattagttaatcgtaatattataatattt 205


Query: 206 acata 210
|||||
Sbjct: 206 acata 210


>Contig-U15663-1 (Contig-U15663-1Q) /CSM_Contig/Contig-U15663-1Q.Seq.d
Length = 1855

Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus


Query: 311 aataatgatgaaaataataataataat 337
|||||||||||||||||||||||||||
Sbjct: 102 aataatgatgaaaataataataataat 128


Score = 36.2 bits (18), Expect = 0.24
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 311 aataatgatgaaaataat 328
||||||||||||||||||
Sbjct: 90 aataatgatgaaaataat 107


Score = 32.2 bits (16), Expect = 3.8
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 322 aaataataataataat 337
||||||||||||||||
Sbjct: 1610 aaataataataataat 1625


>Contig-U11780-1 (Contig-U11780-1Q) /CSM_Contig/Contig-U11780-1Q.Seq.d
Length = 1866

Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus


Query: 311 aataatgatgaaaataataataataat 337
|||||||||||||||||||||||||||
Sbjct: 534 aataatgatgaaaataataataataat 560


Score = 32.2 bits (16), Expect = 3.8
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 323 aataataataataatcaaca 342
||||||||||||||| ||||
Sbjct: 552 aataataataataataaaca 571


Score = 32.2 bits (16), Expect = 3.8
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 323 aataataataataatcaaca 342
|||||||||||||| |||||
Sbjct: 555 aataataataataaacaaca 574


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 71,159
Number of Sequences: 8402
Number of extensions: 71159
Number of successful extensions: 19742
Number of sequences better than 10.0: 1520
length of query: 2379
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2362
effective length of database: 7,932,708
effective search space: 18737056296
effective search space used: 18737056296
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 3.28
Homology vs DNA
Query= Contig-U16339-1 (Contig-U16339-1Q) /CSM_Contig/Contig-U16339-1Q.Seq.d
(2379 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ340385) Dictyostelium discoideum cDNA clone:dda12j20, 3' ... 1263 0.0 1
(BJ323993) Dictyostelium discoideum cDNA clone:dda4b10, 5' e... 1255 0.0 1
(BJ358774) Dictyostelium discoideum cDNA clone:ddc11f11, 5' ... 1253 0.0 1
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 1249 0.0 2
(BJ361907) Dictyostelium discoideum cDNA clone:ddc19e12, 5' ... 1235 0.0 1
(BJ387111) Dictyostelium discoideum cDNA clone:dds12l09, 5' ... 1189 0.0 1
(BJ350703) Dictyostelium discoideum cDNA clone:dda40b22, 3' ... 1187 0.0 3
(BJ371966) Dictyostelium discoideum cDNA clone:ddc10h17, 3' ... 1178 0.0 2
(BJ342752) Dictyostelium discoideum cDNA clone:dda1o07, 3' e... 1178 0.0 3
(BJ375310) Dictyostelium discoideum cDNA clone:ddc18b08, 3' ... 1174 0.0 3
(BJ378067) Dictyostelium discoideum cDNA clone:ddc26p24, 3' ... 1166 0.0 2
(AU037565) Dictyostelium discoideum slug cDNA, clone SSD792. 1152 0.0 1
(BJ401857) Dictyostelium discoideum cDNA clone:dds19j17, 3' ... 1136 0.0 3
(BJ401120) Dictyostelium discoideum cDNA clone:dds22o02, 3' ... 1136 0.0 3
(BJ398424) Dictyostelium discoideum cDNA clone:dds12l09, 3' ... 1136 0.0 3
(BJ397897) Dictyostelium discoideum cDNA clone:dds10g03, 3' ... 1136 0.0 2
(BJ382894) Dictyostelium discoideum cDNA clone:ddc46a09, 3' ... 1136 0.0 4
(BJ382737) Dictyostelium discoideum cDNA clone:ddc45p16, 3' ... 1136 0.0 3
(BJ382624) Dictyostelium discoideum cDNA clone:ddc45i12, 3' ... 1136 0.0 4
(BJ378989) Dictyostelium discoideum cDNA clone:ddc33o09, 3' ... 1136 0.0 4
(BJ376227) Dictyostelium discoideum cDNA clone:ddc21n14, 3' ... 1136 0.0 4
(BJ375924) Dictyostelium discoideum cDNA clone:ddc20e17, 3' ... 1136 0.0 4
(BJ375604) Dictyostelium discoideum cDNA clone:ddc19e12, 3' ... 1136 0.0 5
(BJ375309) Dictyostelium discoideum cDNA clone:ddc18b07, 3' ... 1136 0.0 4
(BJ372113) Dictyostelium discoideum cDNA clone:ddc11f11, 3' ... 1136 0.0 2
(BJ372110) Dictyostelium discoideum cDNA clone:ddc11e12, 3' ... 1136 0.0 2
(BJ354962) Dictyostelium discoideum cDNA clone:dda55e11, 3' ... 1136 0.0 4
(BJ351083) Dictyostelium discoideum cDNA clone:dda42b02, 3' ... 1136 0.0 4
(BJ348694) Dictyostelium discoideum cDNA clone:dda34e01, 3' ... 1136 0.0 4
(BJ348532) Dictyostelium discoideum cDNA clone:dda33d17, 3' ... 1136 0.0 4
(BJ346380) Dictyostelium discoideum cDNA clone:dda30a24, 3' ... 1136 0.0 2
(BJ345557) Dictyostelium discoideum cDNA clone:dda28f06, 3' ... 1136 0.0 2
(BJ344081) Dictyostelium discoideum cDNA clone:dda18j07, 3' ... 1136 0.0 3
(BJ342119) Dictyostelium discoideum cDNA clone:dda9h18, 3' e... 1136 0.0 2
(BJ340075) Dictyostelium discoideum cDNA clone:dda11d18, 3' ... 1136 0.0 2
(BJ339925) Dictyostelium discoideum cDNA clone:dda11b02, 3' ... 1136 0.0 2
(BJ342249) Dictyostelium discoideum cDNA clone:dda13h06, 3' ... 1130 0.0 3
(BJ402105) Dictyostelium discoideum cDNA clone:dds20c14, 3' ... 1128 0.0 4
(BJ383901) Dictyostelium discoideum cDNA clone:ddc47i17, 3' ... 1128 0.0 3
(BJ380418) Dictyostelium discoideum cDNA clone:ddc38h03, 3' ... 1128 0.0 4
(BJ349258) Dictyostelium discoideum cDNA clone:dda35m19, 3' ... 1128 0.0 3
(BJ342864) Dictyostelium discoideum cDNA clone:dda15n06, 3' ... 1128 0.0 2
(BJ399088) Dictyostelium discoideum cDNA clone:dds4f05, 3' e... 1124 0.0 2
(BJ340403) Dictyostelium discoideum cDNA clone:dda12n23, 3' ... 1118 0.0 1
(BJ385285) Dictyostelium discoideum cDNA clone:ddc54n10, 3' ... 1116 0.0 2
(BJ376685) Dictyostelium discoideum cDNA clone:ddc29b16, 3' ... 1116 0.0 2
(BJ374296) Dictyostelium discoideum cDNA clone:ddc7i01, 3' e... 1102 0.0 2
(BJ341309) Dictyostelium discoideum cDNA clone:dda6i02, 3' e... 1090 0.0 3
(BJ385411) Dictyostelium discoideum cDNA clone:ddc54i22, 3' ... 1084 0.0 4
(BJ343595) Dictyostelium discoideum cDNA clone:dda16g14, 3' ... 1082 0.0 3
(BJ341711) Dictyostelium discoideum cDNA clone:dda7h24, 3' e... 1074 0.0 3
(BJ401597) Dictyostelium discoideum cDNA clone:dds23e20, 3' ... 1049 0.0 4
(BJ399467) Dictyostelium discoideum cDNA clone:dds6j06, 3' e... 1049 0.0 4
(BJ399319) Dictyostelium discoideum cDNA clone:dds5n08, 3' e... 1049 0.0 4
(BJ377437) Dictyostelium discoideum cDNA clone:ddc24f17, 3' ... 1049 0.0 4
(BJ375193) Dictyostelium discoideum cDNA clone:ddc17d21, 3' ... 1049 0.0 4
(BJ374916) Dictyostelium discoideum cDNA clone:ddc16d22, 3' ... 1049 0.0 5
(BJ374867) Dictyostelium discoideum cDNA clone:ddc16h13, 3' ... 1049 0.0 4
(BJ373899) Dictyostelium discoideum cDNA clone:ddc5d11, 3' e... 1049 0.0 4
(BJ371971) Dictyostelium discoideum cDNA clone:ddc10j18, 3' ... 1049 0.0 5
(BJ346633) Dictyostelium discoideum cDNA clone:dda24d18, 3' ... 1049 0.0 4
(BJ342547) Dictyostelium discoideum cDNA clone:dda14e16, 3' ... 1049 0.0 4
(BJ342329) Dictyostelium discoideum cDNA clone:dda13c15, 3' ... 1049 0.0 3
(BJ341871) Dictyostelium discoideum cDNA clone:dda8d17, 3' e... 1049 0.0 4
(BJ340878) Dictyostelium discoideum cDNA clone:dda4b10, 3' e... 1049 0.0 4
(BJ373463) Dictyostelium discoideum cDNA clone:ddc3n01, 3' e... 1045 0.0 4
(BJ398235) Dictyostelium discoideum cDNA clone:dds11h14, 3' ... 1043 0.0 4
(BJ377607) Dictyostelium discoideum cDNA clone:ddc25b05, 3' ... 1043 0.0 3
(BJ344356) Dictyostelium discoideum cDNA clone:dda19a06, 3' ... 1043 0.0 4
(BJ400811) Dictyostelium discoideum cDNA clone:dds14n21, 3' ... 1041 0.0 3
(BJ399589) Dictyostelium discoideum cDNA clone:dds6j17, 3' e... 1041 0.0 4
(BJ347225) Dictyostelium discoideum cDNA clone:dda26p10, 3' ... 1041 0.0 4
(BJ340965) Dictyostelium discoideum cDNA clone:dda4g17, 3' e... 1041 0.0 4
(BJ400441) Dictyostelium discoideum cDNA clone:dds13e12, 3' ... 1037 0.0 2
(BJ325175) Dictyostelium discoideum cDNA clone:dda13h06, 5' ... 1031 0.0 3
(BJ373512) Dictyostelium discoideum cDNA clone:ddc3l10, 3' e... 1023 0.0 3
(BJ386420) Dictyostelium discoideum cDNA clone:ddc58m05, 3' ... 1019 0.0 2
(BJ382229) Dictyostelium discoideum cDNA clone:ddc44e04, 3' ... 1019 0.0 2
(BJ386188) Dictyostelium discoideum cDNA clone:ddc57m09, 3' ... 1013 0.0 2
(BJ373887) Dictyostelium discoideum cDNA clone:ddc5a10, 3' e... 1013 0.0 3
(BJ381988) Dictyostelium discoideum cDNA clone:ddc43e14, 3' ... 1009 0.0 4
(BJ402755) Dictyostelium discoideum cDNA clone:dds17m21, 3' ... 1005 0.0 2
(BJ378306) Dictyostelium discoideum cDNA clone:ddc31b18, 3' ... 983 0.0 2
(BJ385694) Dictyostelium discoideum cDNA clone:ddc55h19, 3' ... 971 0.0 2
(BJ379446) Dictyostelium discoideum cDNA clone:ddc34k22, 3' ... 971 0.0 2
(BJ399312) Dictyostelium discoideum cDNA clone:dds5k10, 3' e... 965 0.0 5
(BJ384353) Dictyostelium discoideum cDNA clone:ddc49l03, 3' ... 965 0.0 2
(BJ384303) Dictyostelium discoideum cDNA clone:ddc49a01, 3' ... 959 0.0 2
(BJ349492) Dictyostelium discoideum cDNA clone:dda36l16, 3' ... 955 0.0 2
(BJ383957) Dictyostelium discoideum cDNA clone:ddc47d22, 3' ... 948 0.0 2
(BJ373824) Dictyostelium discoideum cDNA clone:ddc4m04, 3' e... 783 0.0 5
(BJ374760) Dictyostelium discoideum cDNA clone:ddc16m02, 3' ... 1043 0.0 3
(BJ377168) Dictyostelium discoideum cDNA clone:ddc22g23, 3' ... 890 0.0 2
(BJ381891) Dictyostelium discoideum cDNA clone:ddc43c07, 3' ... 1057 0.0 3
(BJ373613) Dictyostelium discoideum cDNA clone:ddc3l20, 3' e... 993 0.0 2
(BJ381956) Dictyostelium discoideum cDNA clone:ddc43o10, 3' ... 936 0.0 4
(BJ372889) Dictyostelium discoideum cDNA clone:ddc14e20, 3' ... 954 0.0 3
(BJ341198) Dictyostelium discoideum cDNA clone:dda5j15, 3' e... 1035 0.0 2
(BJ400260) Dictyostelium discoideum cDNA clone:dds9a16, 3' e... 1037 0.0 1
(BJ345578) Dictyostelium discoideum cDNA clone:dda28j05, 3' ... 1029 0.0 2
(BJ356398) Dictyostelium discoideum cDNA clone:dda60n03, 3' ... 989 0.0 2
(BJ374432) Dictyostelium discoideum cDNA clone:ddc7d21, 3' e... 505 0.0 4
(BJ381618) Dictyostelium discoideum cDNA clone:ddc42i01, 3' ... 916 0.0 4
(BJ323516) Dictyostelium discoideum cDNA clone:dda11b02, 5' ... 846 0.0 3
(BJ359942) Dictyostelium discoideum cDNA clone:ddc3l10, 5' e... 896 0.0 3
(BJ388653) Dictyostelium discoideum cDNA clone:dds6j17, 5' e... 936 0.0 2
(BJ325572) Dictyostelium discoideum cDNA clone:dda1o07, 5' e... 815 0.0 3
(BJ384759) Dictyostelium discoideum cDNA clone:ddc50j13, 3' ... 890 0.0 4
(BJ328675) Dictyostelium discoideum cDNA clone:dda29e04, 5' ... 791 0.0 3
(BJ387844) Dictyostelium discoideum cDNA clone:dds5k10, 5' e... 791 0.0 3
(BJ390808) Dictyostelium discoideum cDNA clone:dds23e20, 5' ... 785 0.0 2
(BJ323639) Dictyostelium discoideum cDNA clone:dda11d18, 5' ... 803 0.0 3
(BJ328409) Dictyostelium discoideum cDNA clone:dda28f06, 5' ... 789 0.0 3
(BJ358645) Dictyostelium discoideum cDNA clone:ddc10j18, 5' ... 787 0.0 3
(BJ386681) Dictyostelium discoideum cDNA clone:dds10g03, 5' ... 787 0.0 3
(BJ389903) Dictyostelium discoideum cDNA clone:dds20c14, 5' ... 785 0.0 3
(BJ360279) Dictyostelium discoideum cDNA clone:ddc5d11, 5' e... 785 0.0 3
(BJ360876) Dictyostelium discoideum cDNA clone:ddc8i12, 5' e... 779 0.0 3
(BJ360770) Dictyostelium discoideum cDNA clone:ddc7d21, 5' e... 779 0.0 3
(BJ325253) Dictyostelium discoideum cDNA clone:dda13c15, 5' ... 777 0.0 3
(BJ325083) Dictyostelium discoideum cDNA clone:dda9h18, 5' e... 785 0.0 3
(BJ341752) Dictyostelium discoideum cDNA clone:dda8e01, 3' e... 930 0.0 1
(BJ361675) Dictyostelium discoideum cDNA clone:ddc18b08, 5' ... 787 0.0 3
(BJ361203) Dictyostelium discoideum cDNA clone:ddc16m02, 5' ... 777 0.0 3
(BJ323911) Dictyostelium discoideum cDNA clone:dda12j20, 5' ... 789 0.0 3
(BJ360776) Dictyostelium discoideum cDNA clone:ddc7f22, 5' e... 777 0.0 3
(BJ369059) Dictyostelium discoideum cDNA clone:ddc49l03, 5' ... 833 0.0 3
(BJ325445) Dictyostelium discoideum cDNA clone:dda14e16, 5' ... 785 0.0 3
(BJ371477) Dictyostelium discoideum cDNA clone:ddc58m05, 5' ... 813 0.0 3
(BJ361334) Dictyostelium discoideum cDNA clone:ddc16d22, 5' ... 769 0.0 3
(BJ361674) Dictyostelium discoideum cDNA clone:ddc18b07, 5' ... 783 0.0 3
(BJ326464) Dictyostelium discoideum cDNA clone:dda16g14, 5' ... 779 0.0 3
(BJ370889) Dictyostelium discoideum cDNA clone:ddc55h19, 5' ... 753 0.0 3
(BJ336833) Dictyostelium discoideum cDNA clone:dda55e11, 5' ... 751 0.0 3
(BJ324880) Dictyostelium discoideum cDNA clone:dda8d17, 5' e... 787 0.0 3
(BJ388423) Dictyostelium discoideum cDNA clone:dds9a16, 5' e... 902 0.0 1
(BJ336519) Dictyostelium discoideum cDNA clone:dda54o01, 5' ... 789 0.0 3
(AU053330) Dictyostelium discoideum slug cDNA, clone SLI403. 896 0.0 1
(BJ358772) Dictyostelium discoideum cDNA clone:ddc11e12, 5' ... 777 0.0 3
(BJ369390) Dictyostelium discoideum cDNA clone:ddc50k10, 5' ... 789 0.0 3
(BJ323929) Dictyostelium discoideum cDNA clone:dda12n23, 5' ... 785 0.0 3
(BJ362417) Dictyostelium discoideum cDNA clone:ddc21n14, 5' ... 789 0.0 3
(BJ362160) Dictyostelium discoideum cDNA clone:ddc20e17, 5' ... 785 0.0 3
(BJ324394) Dictyostelium discoideum cDNA clone:dda6i02, 5' e... 527 0.0 4
(BJ331564) Dictyostelium discoideum cDNA clone:dda35m19, 5' ... 749 0.0 4
(BJ360641) Dictyostelium discoideum cDNA clone:ddc7i01, 5' e... 779 0.0 3
(BJ324066) Dictyostelium discoideum cDNA clone:dda4g17, 5' e... 775 0.0 3
(BJ363492) Dictyostelium discoideum cDNA clone:ddc26p24, 5' ... 789 0.0 2
(BJ364007) Dictyostelium discoideum cDNA clone:ddc29b16, 5' ... 698 0.0 3
(BJ331139) Dictyostelium discoideum cDNA clone:dda34e01, 5' ... 757 0.0 2
(BJ387850) Dictyostelium discoideum cDNA clone:dds5n08, 5' e... 809 0.0 1
(BJ361571) Dictyostelium discoideum cDNA clone:ddc17d21, 5' ... 658 0.0 3
(BJ362863) Dictyostelium discoideum cDNA clone:ddc23g23, 5' ... 702 0.0 3
(BJ386845) Dictyostelium discoideum cDNA clone:dds10o19, 5' ... 632 0.0 3
(BJ363082) Dictyostelium discoideum cDNA clone:ddc25b05, 5' ... 668 0.0 3
(BJ367639) Dictyostelium discoideum cDNA clone:ddc43o10, 5' ... 618 0.0 3
(BJ360085) Dictyostelium discoideum cDNA clone:ddc4m04, 5' e... 626 0.0 3
(BJ369450) Dictyostelium discoideum cDNA clone:ddc50j13, 5' ... 658 0.0 3
(BJ331003) Dictyostelium discoideum cDNA clone:dda33d17, 5' ... 615 0.0 3
(BJ388552) Dictyostelium discoideum cDNA clone:dds6j06, 5' e... 613 0.0 3
(BJ364912) Dictyostelium discoideum cDNA clone:ddc33o09, 5' ... 617 0.0 3
(BJ371298) Dictyostelium discoideum cDNA clone:ddc57m09, 5' ... 609 0.0 3
(BJ366188) Dictyostelium discoideum cDNA clone:ddc38h03, 5' ... 609 0.0 3
(BJ333248) Dictyostelium discoideum cDNA clone:dda42b02, 5' ... 613 0.0 3
(BJ328424) Dictyostelium discoideum cDNA clone:dda28j05, 5' ... 605 0.0 3
(BJ331687) Dictyostelium discoideum cDNA clone:dda36l16, 5' ... 611 0.0 3
(BJ367584) Dictyostelium discoideum cDNA clone:ddc43c07, 5' ... 599 0.0 3
(BJ389667) Dictyostelium discoideum cDNA clone:dds19j17, 5' ... 599 0.0 3
(BJ367285) Dictyostelium discoideum cDNA clone:ddc42i01, 5' ... 599 0.0 3
(BJ327061) Dictyostelium discoideum cDNA clone:dda19a06, 5' ... 599 0.0 3
(BJ374440) Dictyostelium discoideum cDNA clone:ddc7f22, 3' e... 751 0.0 1
(BJ371839) Dictyostelium discoideum cDNA clone:ddc1o14, 3' e... 624 0.0 3
(BJ368707) Dictyostelium discoideum cDNA clone:ddc47d22, 5' ... 609 0.0 3
(BJ329840) Dictyostelium discoideum cDNA clone:dda26p10, 5' ... 618 0.0 3
(BJ340728) Dictyostelium discoideum cDNA clone:dda3f17, 3' e... 718 0.0 1
(BJ390378) Dictyostelium discoideum cDNA clone:dds22o02, 5' ... 611 0.0 3
(BJ389207) Dictyostelium discoideum cDNA clone:dds17m21, 5' ... 609 0.0 3
(BJ326287) Dictyostelium discoideum cDNA clone:dda15n06, 5' ... 555 0.0 3
(BJ381642) Dictyostelium discoideum cDNA clone:ddc42o01, 3' ... 710 0.0 1
(BJ369016) Dictyostelium discoideum cDNA clone:ddc49a01, 5' ... 555 0.0 3
(BJ391068) Dictyostelium discoideum cDNA clone:dds14n21, 5' ... 597 0.0 3
(BJ338079) Dictyostelium discoideum cDNA clone:dda60c03, 5' ... 615 0.0 3
(BJ363012) Dictyostelium discoideum cDNA clone:ddc24f17, 5' ... 539 0.0 3
(BJ329316) Dictyostelium discoideum cDNA clone:dda24d18, 5' ... 597 0.0 3
(BJ360036) Dictyostelium discoideum cDNA clone:ddc3l20, 5' e... 535 0.0 3
(BJ361289) Dictyostelium discoideum cDNA clone:ddc16h13, 5' ... 541 0.0 3
(BJ360269) Dictyostelium discoideum cDNA clone:ddc5a10, 5' e... 686 0.0 1
(BJ368326) Dictyostelium discoideum cDNA clone:ddc46a09, 5' ... 527 0.0 4
(BJ358473) Dictyostelium discoideum cDNA clone:ddc1o14, 5' e... 609 0.0 2
(BJ370645) Dictyostelium discoideum cDNA clone:ddc54i22, 5' ... 529 0.0 3
(AU062216) Dictyostelium discoideum slug cDNA, clone SLI403. 656 0.0 1
(BJ358638) Dictyostelium discoideum cDNA clone:ddc10h17, 5' ... 500 0.0 3
(BJ324287) Dictyostelium discoideum cDNA clone:dda5j15, 5' e... 537 e-179 3
(BJ365307) Dictyostelium discoideum cDNA clone:ddc34k22, 5' ... 442 e-166 3
(BJ367304) Dictyostelium discoideum cDNA clone:ddc42o01, 5' ... 452 e-166 3
(BJ359452) Dictyostelium discoideum cDNA clone:ddc14e20, 5' ... 458 e-166 3
(BJ332764) Dictyostelium discoideum cDNA clone:dda40b22, 5' ... 438 e-165 3
(BJ370527) Dictyostelium discoideum cDNA clone:ddc54n10, 5' ... 436 e-165 3
(BJ368661) Dictyostelium discoideum cDNA clone:ddc47i17, 5' ... 436 e-165 3
(BJ387658) Dictyostelium discoideum cDNA clone:dds4f05, 5' e... 464 e-163 3
(BJ390508) Dictyostelium discoideum cDNA clone:dds22o13, 5' ... 531 e-162 2
(AU038809) Dictyostelium discoideum slug cDNA, clone SSL509. 561 e-155 1
(BJ359902) Dictyostelium discoideum cDNA clone:ddc3n01, 5' e... 545 e-150 1
(BJ399046) Dictyostelium discoideum cDNA clone:dds3g21, 3' e... 511 e-140 1
(AU040091) Dictyostelium discoideum slug cDNA, clone SLA393. 488 e-133 1
(AU071760) Dictyostelium discoideum slug cDNA, clone SSC471. 468 e-127 1
(C94414) Dictyostelium discoideum slug cDNA, clone SSK672. 452 e-122 1
(BJ383548) Dictyostelium discoideum cDNA clone:ddc53l12, 3' ... 264 e-122 2
(BJ378518) Dictyostelium discoideum cDNA clone:ddc32b01, 3' ... 359 e-108 2
(BJ386958) Dictyostelium discoideum cDNA clone:dds11h14, 5' ... 309 e-106 3
(BJ367661) Dictyostelium discoideum cDNA clone:ddc43e14, 5' ... 147 2e-78 3
(AU073452) Dictyostelium discoideum slug cDNA, clone SSH243. 186 2e-62 2
(BJ385196) Dictyostelium discoideum cDNA clone:ddc54l03, 3' ... 113 7e-59 4
(BJ324757) Dictyostelium discoideum cDNA clone:dda7h24, 5' e... 105 1e-58 3
(AU073624) Dictyostelium discoideum slug cDNA, clone SSH694. 174 3e-57 2
(AU074677) Dictyostelium discoideum slug cDNA, clone SSL509. 88 7e-43 3
(BJ329088) Dictyostelium discoideum cDNA clone:dda30a24, 5' ... 117 4e-40 2
(BJ374522) Dictyostelium discoideum cDNA clone:ddc8i12, 3' e... 121 4e-34 3
(BJ329578) Dictyostelium discoideum cDNA clone:dda25e13, 5' ... 123 2e-27 2
(C84195) Dictyostelium discoideum slug cDNA, clone SSC471. 127 2e-24 1
(BJ367980) Dictyostelium discoideum cDNA clone:ddc44e04, 5' ... 123 3e-23 1
(AU038424) Dictyostelium discoideum slug cDNA, clone SSH694. 105 8e-18 1
(BJ363083) Dictyostelium discoideum cDNA clone:ddc25b06, 5' ... 70 4e-07 1
(BJ368120) Dictyostelium discoideum cDNA clone:ddc45i12, 5' ... 54 0.025 1
(AC133060) Rattus norvegicus clone CH230-11A15, *** SEQUENCI... 50 0.39 1
(CU633280) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.39 1
(CT826397) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.39 1
(FH682261) CHO_OF5024xg21f1.ab1 CHO_OF5 Nicotiana tabacum ge... 50 0.39 1
(FH061850) CHO_OF3601xa11r1.ab1 CHO_OF3 Nicotiana tabacum ge... 50 0.39 1
(FH305160) CHO_OF4317xi14f1.ab1 CHO_OF4 Nicotiana tabacum ge... 42 0.81 2
(AC095614) Rattus norvegicus clone CH230-8C15, *** SEQUENCIN... 48 1.5 1
(AC095142) Rattus norvegicus clone CH230-8A7, *** SEQUENCING... 48 1.5 1
(CU463047) Medicago truncatula chromosome 5 clone mth2-71h21... 48 1.5 1
(AC180359) Strongylocentrotus purpuratus clone R3-3114F22, W... 48 1.5 1
(AC178403) Strongylocentrotus purpuratus clone R3-3110P2, WO... 48 1.5 1
(AC174940) Bos taurus clone CH240-278P16, WORKING DRAFT SEQU... 48 1.5 1
(AC164050) Bos taurus clone CH240-149K7, *** SEQUENCING IN P... 48 1.5 1
(CX542488) s13dNF94H10GS090_468292 Germinating Seed Medicago... 48 1.5 1
(AJ499564) Medicago truncatula EST, clone mtgmacc120005g02. 48 1.5 1
(BI263929) NF093A08PL1F1065 Phosphate starved leaf Medicago ... 48 1.5 1
(BG646995) EST508614 HOGA Medicago truncatula cDNA clone pHO... 48 1.5 1
(BG582410) EST484154 GVN Medicago truncatula cDNA clone pGVN... 48 1.5 1
(AA661000) 00897 MtRHE Medicago truncatula cDNA 5' similar t... 48 1.5 1
(BF520040) EST457508 DSIL Medicago truncatula cDNA clone pDS... 48 1.5 1
(BE205093) EST397769 KV0 Medicago truncatula cDNA clone pKV0... 48 1.5 1
(AW776481) EST335546 DSIL Medicago truncatula cDNA clone pDS... 48 1.5 1
(AW775043) EST334194 KV3 Medicago truncatula cDNA clone pKV3... 48 1.5 1
(AW560175) EST315223 DSIR Medicago truncatula cDNA clone pDS... 48 1.5 1
(EV258473) MTYDK76TF JCVI-MT1 Medicago truncatula cDNA 5', m... 48 1.5 1
(AW256864) EST305001 KV2 Medicago truncatula cDNA clone KV2-... 48 1.5 1
(AP008934) Staphylococcus saprophyticus subsp. saprophyticus... 48 1.5 1
(CU074323) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 3.7 9
(DU409590) 1098486033277 CHORI-243 Ovis aries genomic clone ... 34 4.2 3
(AX661200) Sequence 3 from Patent WO0246217. 36 4.3 5
(U41012) Caenorhabditis elegans cosmid C06A6, complete seque... 36 4.4 5
(AC177729) Strongylocentrotus purpuratus clone R3-1008L6, WO... 38 4.6 7
(AC134909) Mus musculus chromosome 3 clone RP23-402O2, compl... 46 6.1 1
(AC124493) Mus musculus BAC clone RP23-462P13 from chromosom... 46 6.1 1
(AP004517) Lotus japonicus genomic DNA, chromosome 6, clone:... 46 6.1 1
(AC128192) Rattus norvegicus clone CH230-32F18, *** SEQUENCI... 46 6.1 1
(AC127871) Rattus norvegicus clone CH230-237O7, WORKING DRAF... 46 6.1 1
(AC112404) Rattus norvegicus clone CH230-107P3, *** SEQUENCI... 46 6.1 1
(AC111994) Rattus norvegicus clone CH230-148A18, *** SEQUENC... 46 6.1 1
(AC104175) Rattus norvegicus clone CH230-132O5, WORKING DRAF... 46 6.1 1
(AC097995) Rattus norvegicus clone CH230-56E12, *** SEQUENCI... 46 6.1 1
(CU914392) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 6.1 1
(CU606904) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 6.1 1
(AC094114) Rattus norvegicus clone CH230-2N4, *** SEQUENCING... 46 6.1 1
(DH548740) Rattus norvegicus DNA, BAC clone: RNB1-056E09, 3'... 46 6.1 1
(DE075889) Oryzias latipes DNA, clone: ola1-179G04.F, genomi... 46 6.1 1
(BZ186125) CH230-278M3.TJ CHORI-230 Segment 2 Rattus norvegi... 46 6.1 1
(BG936543) SS1-0922 Atlantic Salmon spleen Salmo salar cDNA ... 46 6.1 1
(FM131678) Rattus norvegicus EST, 5'-end sequence, clone etn... 46 6.1 1
(EJ869658) 1093018340314 Global-Ocean-Sampling_GS-30-02-01-1... 32 6.1 4
(DQ870777) Mus musculus strain NMRI chromosome 1 fusion brea... 38 7.7 3
(CE167008) tigr-gss-dog-17000326572997 Dog Library Canis lup... 42 8.6 2
(AG697693) Macaca fuscata fuscata DNA, clone: MSB2-135A12_F,... 38 9.7 3

>(BJ340385) Dictyostelium discoideum cDNA clone:dda12j20, 3' end,
single read.
Length = 644

Score = 1263 bits (637), Expect = 0.0
Identities = 642/644 (99%)
Strand = Plus / Minus


Query: 1530 aaccaggtgatattcatttattccataaattagaaggtttaggtatgcaaagcatataca 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aaccaggtgatattcatttattccataaattagaaggtttaggtatgcaaagcatataca 585


Query: 1590 aattataataaaccagattgtggtccattaggtaaaggttcaattgaagatggtaaaatt 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aattataataaaccagattgtggtccattaggtaaaggttcaattgaagatggtaaaatt 525


Query: 1650 tatacattttcatcatttatgtgttggacaggttgtgatagattagcaaagattgcaaag 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tatacattttcatcatttatgtgttggacaggttgtgatagattagcaaagattgcaaag 465


Query: 1710 agtttaaagattccattacgtgcacatttctggcaagaatctgcaaataaaatcaaggaa 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 agtttaaagattccattacgtgcacatttctggcaagaatctgcaaataaaatcaaggaa 405


Query: 1770 gaaatgatggaacgttgcttcaacaaggaaaagaattcatttgtatcaacttgggatgga 1829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gaaatgatggaacgttgcttcaacaaggaaaagaattcatttgtatcaacttgggatgga 345


Query: 1830 gatgatgttgatccttaccttttattgattgcagaatctggattcactaaaattgatgat 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gatgatgttgatccttaccttttattgattgcagaatctggattcactaaaattgatgat 285


Query: 1890 ccaaaattcattggaaccgttgaatatttagagaaaaaacttagaagaggcaaatacatt 1949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ccaaaattcattggaaccgttgaatatttagagaaaaaacttagaagaggcaaatacatt 225


Query: 1950 attcaatcaccagacagtgttagtgcatcaactacattcactctctactatatttcttgt 2009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 attcaatcaccagacagtgttagtgcatcaactacattcactctctactatatttcttgt 165


Query: 2010 attgctaaaatgggtagaaaagaagaagcaagagaactttttgaaaatatccttaatgat 2069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 attgctaaaatgggtagaaaagaagaagcaagagaactttttgaaaatatccttaatgat 105


Query: 2070 tgcactccattgggtttaattagtcaagatgttaaccttgaaaccaaagaaatttggggt 2129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 tgcactccattgggtttaattagtcaagatgttaaccttgaaaccaaagaaatttggggt 45


Query: 2130 aactttccaaaaacaacttcaatggttggtataattaatgctgc 2173
||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 44 aactttccaaaaacaacgncaatggttggtataattaatgctgc 1

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,552,910,602
Number of extensions: 149660427
Number of successful extensions: 12184494
Number of sequences better than 10.0: 277
Length of query: 2379
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 2354
Effective length of database: 96,311,147,814
Effective search space: 226716441954156
Effective search space used: 226716441954156
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.27
Homology vs Protein
Query= Contig-U16339-1 (Contig-U16339-1Q) /CSM_Contig/Contig-U16339-1Q.Seq.d
(2379 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC116979_62(AC116979|pid:none) Dictyostelium discoideum chromoso... 786 0.0
AY923753_1(AY923753|pid:none) Physarum polycephalum glycosyl hyd... 520 e-145
DQ384332_1(DQ384332|pid:none) Physarum polycephalum glycosyl hyd... 518 e-145
CP000774_307(CP000774|pid:none) Parvibaculum lavamentivorans DS-... 349 e-137
CP000544_1102(CP000544|pid:none) Halorhodospira halophila SL1, c... 348 e-135
CP000453_6(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-1, ... 346 e-134
CP000285_234(CP000285|pid:none) Chromohalobacter salexigens DSM ... 350 e-134
CP000390_1519(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 334 e-133
CP000555_3782(CP000555|pid:none) Methylibium petroleiphilum PM1,... 341 e-131
CP000352_356(CP000352|pid:none) Ralstonia metallidurans CH34, co... 326 e-128
CP000090_415(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 321 e-128
CU633749_367(CU633749|pid:none) Cupriavidus taiwanensis str. LMG... 321 e-126
CP000157_937(CP000157|pid:none) Erythrobacter litoralis HTCC2594... 326 e-120
CP000115_3007(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 308 e-115
DQ390347_1(DQ390347|pid:none) Hartmannella vermiformis glycosyl ... 407 e-111
DQ384328_1(DQ384328|pid:none) Hartmannella vermiformis glycosyl ... 405 e-111
DQ384329_1(DQ384329|pid:none) Hartmannella vermiformis glycosyl ... 405 e-111
AM039952_3335(AM039952|pid:none) Xanthomonas campestris pv. vesi... 363 2e-98
AE008923_3162(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 362 3e-98
AE013598_1578(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 361 6e-98
AM920689_1132(AM920689|pid:none) Xanthomonas campestris pv. camp... 360 1e-97
CP000699_3582(CP000699|pid:none) Sphingomonas wittichii RW1, com... 337 2e-90
CP001635_974(CP001635|pid:none) Variovorax paradoxus S110 chromo... 335 3e-90
CP000316_3844(CP000316|pid:none) Polaromonas sp. JS666, complete... 324 8e-87
CP000529_519(CP000529|pid:none) Polaromonas naphthalenivorans CJ... 323 2e-86
CP000512_4133(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 321 9e-86
CP000158_1553(CP000158|pid:none) Hyphomonas neptunium ATCC 15444... 289 4e-76
CP000449_1015(CP000449|pid:none) Maricaulis maris MCS10, complet... 286 2e-75
CP000777_2477(CP000777|pid:none) Leptospira biflexa serovar Pato... 203 3e-66
CP000139_3157(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 146 9e-59
CP000140_3811(CP000140|pid:none) Parabacteroides distasonis ATCC... 139 3e-58
CP001472_2872(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 123 7e-52
CP000075_2985(CP000075|pid:none) Pseudomonas syringae pv. syring... 134 2e-49
CP000463_3682(CP000463|pid:none) Rhodopseudomonas palustris BisA... 131 8e-48
BX572604_242(BX572604|pid:none) Rhodopseudomonas palustris CGA00... 129 1e-47
AM902716_390(AM902716|pid:none) Bordetella petrii strain DSM 128... 128 3e-47
CP001131_2402(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 124 4e-47
CP001101_941(CP001101|pid:none) Chlorobium phaeobacteroides BS1,... 114 1e-46
AY926577_1(AY926577|pid:none) Jakoba libera glycosyl hydrolase m... 190 2e-46
CP000850_2540(CP000850|pid:none) Salinispora arenicola CNS-205, ... 134 2e-46
DQ384296_1(DQ384296|pid:none) Jakoba libera glycosyl hydrolase m... 189 4e-46
CP000127_1538(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 139 4e-46
CP001099_785(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 117 9e-46
CP001196_1047(CP001196|pid:none) Oligotropha carboxidovorans OM5... 109 3e-45
CP000386_2688(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 117 4e-45
CP000250_1882(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 127 8e-45
CP001644_1380(CP001644|pid:none) Ralstonia pickettii 12D chromos... 116 2e-44
BA000035_2165(BA000035|pid:none) Corynebacterium efficiens YS-31... 109 5e-44
CP000394_1316(CP000394|pid:none) Granulibacter bethesdensis CGDN... 114 8e-44
CP000473_2097(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 110 7e-42
BA000030_1938(BA000030|pid:none) Streptomyces avermitilis MA-468... 108 1e-41
AY924416_1(AY924416|pid:none) Acanthamoeba castellanii glycosyl ... 174 1e-41
AP009044_2179(AP009044|pid:none) Corynebacterium glutamicum R DN... 102 1e-41
AX065255_1(AX065255|pid:none) Sequence 381 from Patent WO0100844... 102 4e-41
DQ384325_1(DQ384325|pid:none) Acanthamoeba castellanii NADPH:qui... 169 4e-40
CP000319_3107(CP000319|pid:none) Nitrobacter hamburgensis X14, c... 106 9e-40
CP000431_1264(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 108 1e-39
CP000251_3183(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 111 2e-39
CP000850_623(CP000850|pid:none) Salinispora arenicola CNS-205, c... 97 6e-39
CP000512_3861(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 109 9e-39
CP001131_3288(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 111 6e-38
CP000854_3666(CP000854|pid:none) Mycobacterium marinum M, comple... 102 8e-38
CP000325_3013(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 102 1e-37
CP001359_3362(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 110 2e-37
AL939116_163(AL939116|pid:none) Streptomyces coelicolor A3(2) co... 92 8e-37
CP000975_1297(CP000975|pid:none) Methylacidiphilum infernorum V4... 158 1e-36
T36210(T36210)conserved hypothetical protein SCE36.11c - Strepto... 92 1e-36
CP001029_1249(CP001029|pid:none) Methylobacterium populi BJ001, ... 122 4e-35
CP001510_978(CP001510|pid:none) Methylobacterium extorquens AM1,... 121 8e-35
CT573213_6601(CT573213|pid:none) Frankia alni str. ACN14A chromo... 100 4e-34
BA000030_98(BA000030|pid:none) Streptomyces avermitilis MA-4680 ... 147 2e-33
CP000077_1166(CP000077|pid:none) Sulfolobus acidocaldarius DSM 6... 91 3e-32
CP000103_2291(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 138 1e-30
AM039952_4169(AM039952|pid:none) Xanthomonas campestris pv. vesi... 136 3e-30
AM746676_8064(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 136 4e-30
BA000023_1217(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 80 6e-30
AE008923_4025(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 134 2e-29
AE013598_456(AE013598|pid:none) Xanthomonas oryzae pv. oryzae KA... 134 2e-29
AP008229_430(AP008229|pid:none) Xanthomonas oryzae pv. oryzae MA... 134 2e-29
CP000967_4661(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P... 134 2e-29
CP000908_4439(CP000908|pid:none) Methylobacterium extorquens PA1... 133 3e-29
CP001298_4758(CP001298|pid:none) Methylobacterium chloromethanic... 133 3e-29
CP001510_4582(CP001510|pid:none) Methylobacterium extorquens AM1... 133 3e-29
AE008922_3938(AE008922|pid:none) Xanthomonas campestris pv. camp... 132 6e-29
CP000076_4047(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 132 8e-29
CP000386_1245(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 132 8e-29
BX571965_1117(BX571965|pid:none) Burkholderia pseudomallei strai... 131 1e-28
AM236080_2959(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 130 2e-28
AM711867_1090(AM711867|pid:none) Clavibacter michiganensis subsp... 130 2e-28
AE016853_3052(AE016853|pid:none) Pseudomonas syringae pv. tomato... 129 4e-28
CP001622_2456(CP001622|pid:none) Rhizobium leguminosarum bv. tri... 129 4e-28
BA000040_6764(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 129 5e-28
CP000115_2295(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 127 2e-27
CP000058_2749(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 127 2e-27
CP000440_2353(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 126 3e-27
CT573213_6144(CT573213|pid:none) Frankia alni str. ACN14A chromo... 126 4e-27
CP000320_92(CP000320|pid:none) Nitrobacter hamburgensis X14 plas... 125 5e-27
CP000151_2476(CP000151|pid:none) Burkholderia sp. 383 chromosome... 125 5e-27
CP000159_374(CP000159|pid:none) Salinibacter ruber DSM 13855, co... 125 7e-27
CP000249_3927(CP000249|pid:none) Frankia sp. CcI3, complete geno... 125 9e-27
AE016853_2446(AE016853|pid:none) Pseudomonas syringae pv. tomato... 125 9e-27
CP000086_968(CP000086|pid:none) Burkholderia thailandensis E264 ... 125 9e-27
CP001025_2218(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 125 9e-27
CP000113_6013(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 124 2e-26
CP000474_3808(CP000474|pid:none) Arthrobacter aurescens TC1, com... 123 3e-26
CP001503_2528(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 123 3e-26
CP000094_1838(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 122 5e-26
CP000251_1437(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 122 5e-26
AP006618_3429(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 122 6e-26
CP001298_1343(CP001298|pid:none) Methylobacterium chloromethanic... 122 6e-26
CP000820_729(CP000820|pid:none) Frankia sp. EAN1pec, complete ge... 122 8e-26
CP001298_4496(CP001298|pid:none) Methylobacterium chloromethanic... 121 1e-25
CU914168_1385(CU914168|pid:none) Ralstonia solanacearum strain I... 120 2e-25
CP001002_122(CP001002|pid:none) Methylobacterium radiotolerans J... 119 4e-25
CP000267_3971(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 119 5e-25
CT573213_4427(CT573213|pid:none) Frankia alni str. ACN14A chromo... 118 9e-25
CP001618_182(CP001618|pid:none) Beutenbergia cavernae DSM 12333,... 118 1e-24
CP000127_1959(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 117 1e-24
CP000820_2187(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 117 2e-24
CP001052_1969(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 117 2e-24
CP001001_2443(CP001001|pid:none) Methylobacterium radiotolerans ... 116 3e-24
AE017261_598(AE017261|pid:none) Picrophilus torridus DSM 9790, c... 115 6e-24
CP000249_1870(CP000249|pid:none) Frankia sp. CcI3, complete geno... 115 6e-24
CP000908_4263(CP000908|pid:none) Methylobacterium extorquens PA1... 115 1e-23
CP001053_2324(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 114 1e-23
BA000011_1338(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA... 114 2e-23
CT573326_1779(CT573326|pid:none) Pseudomonas entomophila str. L4... 113 3e-23
CP001192_370(CP001192|pid:none) Rhizobium leguminosarum bv. trif... 113 3e-23
CP001124_288(CP001124|pid:none) Geobacter bemidjiensis Bem, comp... 113 4e-23
AM746676_6746(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 113 4e-23
AM747722_482(AM747722|pid:none) Burkholderia cenocepacia J2315 c... 112 5e-23
CU633901_309(CU633901|pid:none) Podospora anserina genomic DNA c... 112 8e-23
CP000509_4125(CP000509|pid:none) Nocardioides sp. JS614, complet... 111 1e-22
AP006618_1409(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 111 1e-22
BA000030_6509(BA000030|pid:none) Streptomyces avermitilis MA-468... 110 2e-22
AL939110_80(AL939110|pid:none) Streptomyces coelicolor A3(2) com... 110 2e-22
AM420293_2425(AM420293|pid:none) Saccharopolyspora erythraea NRR... 110 2e-22
CP001016_3283(CP001016|pid:none) Beijerinckia indica subsp. indi... 110 3e-22
AL939129_232(AL939129|pid:none) Streptomyces coelicolor A3(2) co... 109 4e-22
CP000820_128(CP000820|pid:none) Frankia sp. EAN1pec, complete ge... 108 7e-22
AM420293_6939(AM420293|pid:none) Saccharopolyspora erythraea NRR... 108 1e-21
CP000384_3469(CP000384|pid:none) Mycobacterium sp. MCS, complete... 108 1e-21
CP000656_2657(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 107 3e-21
BA000030_6442(BA000030|pid:none) Streptomyces avermitilis MA-468... 106 3e-21
CP001027_758(CP001027|pid:none) Burkholderia ambifaria MC40-6 ch... 105 6e-21
CP000616_367(CP000616|pid:none) Burkholderia vietnamiensis G4 ch... 105 6e-21
AE016958_2215(AE016958|pid:none) Mycobacterium avium subsp. para... 105 8e-21
CP000480_4384(CP000480|pid:none) Mycobacterium smegmatis str. MC... 105 1e-20
CP000511_3807(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 105 1e-20
CP001029_4740(CP001029|pid:none) Methylobacterium populi BJ001, ... 104 2e-20
AM889285_3048(AM889285|pid:none) Gluconacetobacter diazotrophicu... 102 8e-20
AE000516_2549(AE000516|pid:none) Mycobacterium tuberculosis CDC1... 101 1e-19
AM408590_2422(AM408590|pid:none) Mycobacterium bovis BCG Pasteur... 101 1e-19
DQ164098_17(DQ164098|pid:none) Streptomyces hygroscopicus subsp.... 100 2e-19
CP000454_1817(CP000454|pid:none) Arthrobacter sp. FB24, complete... 100 2e-19
CP001402_2511(CP001402|pid:none) Sulfolobus islandicus M.16.4, c... 99 9e-19
AM114193_1186(AM114193|pid:none) Uncultured methanogenic archaeo... 98 2e-18
A90451(A90451) conserved hypothetical protein [imported] - Sulfo... 97 2e-18
AM920437_977(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 97 4e-18
CU458896_1625(CU458896|pid:none) Mycobacterium abscessus chromos... 96 8e-18
CP001403_2662(CP001403|pid:none) Sulfolobus islandicus Y.G.57.14... 96 8e-18
CP001401_2432(CP001401|pid:none) Sulfolobus islandicus M.16.27, ... 96 8e-18
CP000077_1692(CP000077|pid:none) Sulfolobus acidocaldarius DSM 6... 95 1e-17
CP000667_3490(CP000667|pid:none) Salinispora tropica CNB-440, co... 95 1e-17
AM420293_3541(AM420293|pid:none) Saccharopolyspora erythraea NRR... 94 2e-17
AP008957_705(AP008957|pid:none) Rhodococcus erythropolis PR4 DNA... 92 9e-17
AC117076_60(AC117076|pid:none) Dictyostelium discoideum chromoso... 89 7e-16
CP000508_170(CP000508|pid:none) Nocardioides sp. JS614, complete... 88 2e-15
AE008922_1058(AE008922|pid:none) Xanthomonas campestris pv. camp... 87 2e-15
CP001628_1694(CP001628|pid:none) Micrococcus luteus NCTC 2665, c... 87 3e-15
AP007170_89(AP007170|pid:none) Aspergillus oryzae RIB40 genomic ... 87 4e-15
CP000050_3121(CP000050|pid:none) Xanthomonas campestris pv. camp... 86 6e-15
CP000116_923(CP000116|pid:none) Thiobacillus denitrificans ATCC ... 85 1e-14
CP000667_1078(CP000667|pid:none) Salinispora tropica CNB-440, co... 83 4e-14
AE008923_1157(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 83 4e-14
CP001343_25(CP001343|pid:none) Arthrobacter chlorophenolicus A6 ... 82 7e-14
CP000454_3863(CP000454|pid:none) Arthrobacter sp. FB24, complete... 81 2e-13
CP001341_3632(CP001341|pid:none) Arthrobacter chlorophenolicus A... 81 2e-13
CP000850_956(CP000850|pid:none) Salinispora arenicola CNS-205, c... 77 3e-12
CP001399_2522(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 77 3e-12
AM711867_853(AM711867|pid:none) Clavibacter michiganensis subsp.... 77 4e-12
AE006641_2503(AE006641|pid:none) Sulfolobus solfataricus P2, com... 76 6e-12
AM849034_90(AM849034|pid:none) Clavibacter michiganensis subsp. ... 76 6e-12
CP000509_2955(CP000509|pid:none) Nocardioides sp. JS614, complet... 76 6e-12
BA000023_1052(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 73 4e-11
CP000232_639(CP000232|pid:none) Moorella thermoacetica ATCC 3907... 73 5e-11
AE016958_1384(AE016958|pid:none) Mycobacterium avium subsp. para... 72 1e-10
CP000479_2975(CP000479|pid:none) Mycobacterium avium 104, comple... 69 8e-10
CP000432_308(CP000432|pid:none) Rhodococcus jostii RHA1 plasmid ... 63 4e-08
AE006470_1339(AE006470|pid:none) Chlorobium tepidum TLS, complet... 62 7e-08
AP008229_431(AP008229|pid:none) Xanthomonas oryzae pv. oryzae MA... 62 1e-07
CP001403_2678(CP001403|pid:none) Sulfolobus islandicus Y.G.57.14... 59 6e-07
CP000249_2466(CP000249|pid:none) Frankia sp. CcI3, complete geno... 58 1e-06
CP000099_1862(CP000099|pid:none) Methanosarcina barkeri str. Fus... 57 2e-06
AE010299_1157(AE010299|pid:none) Methanosarcina acetivorans str.... 55 1e-05
AL939107_274(AL939107|pid:none) Streptomyces coelicolor A3(2) co... 54 3e-05
CP000750_305(CP000750|pid:none) Kineococcus radiotolerans SRS302... 50 3e-04
CP000850_1048(CP000850|pid:none) Salinispora arenicola CNS-205, ... 49 0.001
CP000860_990(CP000860|pid:none) Candidatus Desulforudis audaxvia... 40 0.30
CP000867_1369(CP000867|pid:none) Methanococcus maripaludis C6, c... 40 0.39
CP000745_532(CP000745|pid:none) Methanococcus maripaludis C7, co... 40 0.51
CT573072_907(CT573072|pid:none) Kuenenia stuttgartiensis genome ... 39 1.1
FP236842_2380(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 38 1.5
CP001344_2394(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 38 1.5
CP000852_90(CP000852|pid:none) Caldivirga maquilingensis IC-167,... 37 2.5
(Q3B6D0) RecName: Full=Adenylosuccinate synthetase; EC=... 37 2.5
DQ017387_1(DQ017387|pid:none) Archaeon #33-9 alpha glucosidase g... 37 3.3
BX950229_1292(BX950229|pid:none) Methanococcus maripaludis strai... 37 3.3
CP000312_725(CP000312|pid:none) Clostridium perfringens SM101, c... 36 5.7

>AC116979_62(AC116979|pid:none) Dictyostelium discoideum chromosome 2
map 6445720-6776760 strain AX4, complete sequence.
Length = 627

Score = 786 bits (2029), Expect(2) = 0.0
Identities = 396/440 (90%), Positives = 397/440 (90%)
Frame = +2

Query: 263 MSFNIPTIXXXXXXXXXXXXXXXXXXXXXXPYISINNKITPENSISSNLNQIEKAVKVAN 442
MSFNIPTI PYISINNKITPENSISSNLNQIEKAVKVAN
Sbjct: 1 MSFNIPTIHTNNSKNDNNDENNNNNQHTENPYISINNKITPENSISSNLNQIEKAVKVAN 60

Query: 443 SQNLDLALIGNCSFGALIDKKSCIKWCCIPRFDADPIFCSLVRKSNDSGFYDVVVENFAF 622
SQNLDLALIGNCSFGALIDKKSCIKWCCIPRFDADPIFCSLVRKSNDS
Sbjct: 61 SQNLDLALIGNCSFGALIDKKSCIKWCCIPRFDADPIFCSLVRKSNDS------------ 108

Query: 623 SEQVYIKNTAVLSTKLYNTNGGGVEVIDFAPRFNMFSRPYRPSMIIRVIKPLGHCRIKIR 802
AVLSTKLYNTNGGGVEVIDFAPRFNMFSRPYRPSMIIRVIKPLGHCRIKIR
Sbjct: 109 ---------AVLSTKLYNTNGGGVEVIDFAPRFNMFSRPYRPSMIIRVIKPLGHCRIKIR 159

Query: 803 LRPTFGYGWGAPEKTRGTNHIRYILPSMVMRLTTNAPISYIVDEVLFEADETLYFVFMAD 982
LRPTFGYGWGAPEKTRGTNHIRYILPSMVMRLTTNAPISYIVDEVLFEADETLYFVFMAD
Sbjct: 160 LRPTFGYGWGAPEKTRGTNHIRYILPSMVMRLTTNAPISYIVDEVLFEADETLYFVFMAD 219

Query: 983 ESLRESLHDVTNTYLDKTIEYWQEYTKSLAIPLEWQSQVLRACITVKLCQFEESGAIIAS 1162
ESLRESLHDVTNTYLDKTIEYWQEYTKSLAIPLEWQSQVLRACITVKLCQFEESGAIIAS
Sbjct: 220 ESLRESLHDVTNTYLDKTIEYWQEYTKSLAIPLEWQSQVLRACITVKLCQFEESGAIIAS 279

Query: 1163 LTTSIPEEPTKEGYDLRFCWIRDTSYIVHTFNKLGNTKMMEDFLTYISNIVSGSLERGGF 1342
LTTSIPEEPTKEGYDLRFCWIRDTSYIVHTFNKLGNTKMMEDFLTYISNIVSGSLERGGF
Sbjct: 280 LTTSIPEEPTKEGYDLRFCWIRDTSYIVHTFNKLGNTKMMEDFLTYISNIVSGSLERGGF 339

Query: 1343 LQPVYGISLETKLYEKSMYRLAGYRGLGPVKIGTRDYKTIQNDVYGQLILASIQMFFDQR 1522
LQPVYGISLETKLYEKSMYRLAGYRGLGPVKIGTRDYKTIQNDVYGQLILASIQMFFDQR
Sbjct: 340 LQPVYGISLETKLYEKSMYRLAGYRGLGPVKIGTRDYKTIQNDVYGQLILASIQMFFDQR 399

Query: 1523 LNKPGDIHLFHKLEGLGMQS 1582
LNKPGDIHLFHKLEGLGMQ+
Sbjct: 400 LNKPGDIHLFHKLEGLGMQA 419

Score = 434 bits (1117), Expect(2) = 0.0
Identities = 209/210 (99%), Positives = 210/210 (100%)
Frame = +3

Query: 1578 KAYTNYNKPDCGPLGKGSIEDGKIYTFSSFMCWTGCDRLAKIAKSLKIPLRAHFWQESAN 1757
+AYTNYNKPDCGPLGKGSIEDGKIYTFSSFMCWTGCDRLAKIAKSLKIPLRAHFWQESAN
Sbjct: 418 QAYTNYNKPDCGPLGKGSIEDGKIYTFSSFMCWTGCDRLAKIAKSLKIPLRAHFWQESAN 477

Query: 1758 KIKEEMMERCFNKEKNSFVSTWDGDDVDPYLLLIAESGFTKIDDPKFIGTVEYLEKKLRR 1937
KIKEEMMERCFNKEKNSFVSTWDGDDVDPYLLLIAESGFTKIDDPKFIGTVEYLEKKLRR
Sbjct: 478 KIKEEMMERCFNKEKNSFVSTWDGDDVDPYLLLIAESGFTKIDDPKFIGTVEYLEKKLRR 537

Query: 1938 GKYIIQSPDSVSASTTFTLYYISCIAKMGRKEEARELFENILNDCTPLGLISQDVNLETK 2117
GKYIIQSPDSVSASTTFTLYYISCIAKMGRKEEARELFENILNDCTPLGLISQDVNLETK
Sbjct: 538 GKYIIQSPDSVSASTTFTLYYISCIAKMGRKEEARELFENILNDCTPLGLISQDVNLETK 597

Query: 2118 EIWGNFPKTTSMVGIINAAICLSKPWESEI 2207
EIWGNFPKTTSMVGIINAAICLSKPWESEI
Sbjct: 598 EIWGNFPKTTSMVGIINAAICLSKPWESEI 627

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 3,479,962,362
Number of extensions: 70596810
Number of successful extensions: 167236
Number of sequences better than 10.0: 209
Number of HSP's gapped: 166531
Number of HSP's successfully gapped: 419
Length of query: 793
Length of database: 1,061,185,681
Length adjustment: 137
Effective length of query: 656
Effective length of database: 613,408,305
Effective search space: 402395848080
Effective search space used: 402395848080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.86 gvh: 0.24 alm: 0.44 top: 0.23 tms: 0.00 mit: 0.37 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: nuclear
28.0 %: cytoplasmic
12.0 %: mitochondrial
8.0 %: vacuolar
4.0 %: cytoskeletal
4.0 %: vesicles of secretory system
4.0 %: extracellular, including cell wall
4.0 %: endoplasmic reticulum

>> prediction for Contig-U16339-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 9
AF (FL, S) 25
SL (DIR, L) 2
SS (DIR, S) 6
SH (FL, L) 0
SF (FL, S) 19
CH (FL, L) 34
CF (FL, S) 25
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0