Contig-U16317-1
Contig ID Contig-U16317-1
Contig update 2004. 6.11
Contig sequence
>Contig-U16317-1 (Contig-U16317-1Q) /CSM_Contig/Contig-U16317-1Q.Seq.d
GTATACGGCCATACTAGGTTGGAAACACATCATCCCGTTCGATCTGATAA
GTAAATCGACCTCAGGCCTTCCAAGTACTCTGGTTGGAGACAACAGGGGA
ACATAGGGTGCTGTATACTATTTTTTTAAACACACTAACACATAAATAAT
ATTTATCTATCTATCCACACACCCAAAGTATTCATATTAATGGCAGAAAT
AACAATATCAATTGAAAATGAAAATTTCATTCAAGTAAATTTACAACCAG
ATCAAACAGTTGAAGATCTAAAACGTAGAGTAGAATTTGAAACCACAATT
TTAGTGAACAATCAAGTTTTAACACTTGATGGAAAAGTATTAGATAATGA
AAAGAAATTATCAGACTATTCAATTAAAGGTGGTGATTTCTTATTGATAA
CAAAAAATGTTTTAAGAGCACCACAACAAAGATCACAACAACCCCAACAA
CCACAACAACCACAACAACCACAACAACAACGTCAACCACAAAGAGATCC
TCTCAATTCACCACAAGATATTTTAGACCACTTTACAAACAATCCTGAAG
ACTTAACTCAAGTTATAAATTCAAATCCAGCATTAGCAAATGCAATCTTA
AGTAAAGATATGAAATTCCTTACTCACTTTGTAGAACAAATCAAAGAACA
ACGTCGTATTCAAGAATTGGCATTAAAAGATCCATATGGTGGAAGAGTAT
CAAAAATTAGCTTATCAACATATTCAACAACAAAATATTGAAAAAAATAT
GCAACATGCTATGGAACATACACCCTGAAGTATTTGCCTCAGTTTATATG
TTATATATTGAATGTTCAATTAATGGACATCCATTAAAAGCTTTTGTAGA
TACAGGTGCCCAACAATNTATTATGTCTGAAAAATGTGCCGAAAGATGCG
AAATTTCAAGAATTATTGATACTAGATTTCATGGTATTGCTAAAGGTGTG
GGTACATCAAAAATTATAGGTAGAGTTCATAGTACAGACTTAAAACTTGG
CAACTCTTTATTCTCTGTATCATTATCTATCCTTCAAAATCAAGATGTTG
ACTTCATCCTTGGTTTGGATATGTTAAAGCGTCATCAAGTCATTTTGGAT
TTAAATAGAGGTGTATTACAAATTGCAAATGAAAAGATTGAATTCCTTCA
TGAAAAAGATTTAAAGGAGATTTTAAATAAAGAACAAAATGATTTAGAAG
AAGATACTAAAAAAGCAACTGCTAATAGTCTTTCACCTTCAACAACTTCA
ACCACTACCACTACCACTACCACTACTTCACCCCAAACTCCAACTAATGC
CACTTCTCCTGTAAATAATAATAATAATAATAATAACAACAACAACAACA
CTAGACCTCCAATTAATTCACCACCAGTTGCAAAGACACCGCAACCAACA
CCACAACCAACTACAAATCAATATGCTTCTGAATCCAATATCCAAACCCT
TATTGGACTTGGTTGTTCAAGAGATAAGGCAATTAGACTTTTAACTCAAG
CTAAAGGGCAATGTTGATGTTGCTGCTTCTATGTTCTTTGGTTAATAAAA
AAAGTAAAAAAAAAAAAAAAAAAAATAAAGATACATAACACCTATGATTG
TAAATAAAACA

Gap no gap
Contig length 1611
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 1175630
End point 1174138
Strand (PLUS/MINUS) MINUS
Number of clones 93
Number of EST 174
Link to clone list U16317
List of clone(s)

est1=SFL195F,1,553
est2=SFJ357F,102,622
est3=AFA372F,104,565
est4=AFK150F,110,739
est5=SFH584F,112,642
est6=SFG344F,113,641
est7=SFG557F,117,772
est8=AFK353F,119,613
est9=CFI315F,119,761
est10=AFC856F,120,777
est11=AFC858F,120,561
est12=AFC866F,120,730
est13=AFD346F,120,778
est14=AFE301F,120,666
est15=AFE670F,120,705
est16=AFF811F,120,739
est17=AFH116F,120,778
est18=AFH129F,120,553
est19=AFH850F,120,705
est20=AFK647F,120,769
est21=AFL237F,120,767
est22=AFO583F,120,777
est23=CFC332F,120,638
est24=CFE374F,120,639
est25=SFE884F,120,780
est26=SFF802F,120,787
est27=SFJ734F,120,773
est28=SFK703F,120,779
est29=SFL472F,120,687
est30=VFE196F,120,765
est31=VFE249F,120,555
est32=AFC110F,121,777
est33=AFB355F,122,727
est34=AFF746F,122,705
est35=SFF829F,122,733
est36=AFG411F,124,799
est37=AFJ464F,124,710
est38=AFJ794F,125,729
est39=AFC552F,126,601
est40=AFE196F,127,776
est41=CHD380F,127,674
est42=AFB792F,128,710
est43=AFC784F,128,555
est44=AFD310F,128,778
est45=AFD359F,128,775
est46=AFE702F,128,732
est47=AFE726F,128,777
est48=AFF250F,128,730
est49=AFJ439F,128,777
est50=AFJ486F,128,779
est51=AFO404F,128,775
est52=CFB680F,128,515
est53=CFD624F,128,722
est54=CFI754F,128,771
est55=CFK105F,128,773
est56=CHA520F,128,728
est57=CHA670F,128,727
est58=SFB134F,128,711
est59=SFD707F,128,704
est60=SFL211F,128,691
est61=AFB490F,130,638
est62=AFK423F,132,710
est63=AFJ488F,133,768
est64=SFK605F,134,811
est65=AFC460F,137,677
est66=AFI606F,137,770
est67=SFJ818F,137,772
est68=VFB232F,137,662
est69=AFJ136F,138,474
est70=AFN812F,142,791
est71=AFB418F,143,645
est72=SLC513F,146,845
est73=AFK208F,147,681
est74=AFA596F,150,831
est75=SFB215F,151,779
est76=AFF219F,155,785
est77=SFJ121F,158,770
est78=AFA685F,159,858
est79=AFG884F,163,781
est80=AFH136F,183,359
est81=AFG207F,191,854
est82=SFH877F,245,428
est83=AFO325F,370,504
est84=SFA812F,370,629
est85=CFI315Z,785,1512
est86=AFJ488Z,814,1464
est87=AFL237Z,814,1240
est88=SFK703Z,832,1524
est89=AFJ439Z,849,1521
est90=AFO325Z,853,1529
est91=SFL211Z,866,1512
est92=VFE196Z,869,1527
est93=AFE196Z,870,1539
est94=AFJ464Z,877,1521
est95=AFG884Z,879,1534
est96=AFN812Z,880,1527
est97=CHA120Z,880,1513
est98=SFJ734Z,880,1523
est99=CHD380Z,881,1514
est100=AFC856Z,882,1539
est101=AFD310Z,882,1542
est102=SFJ818Z,887,1523
est103=CHA270Z,889,1512
est104=AFK647Z,890,1220
est105=CFK105Z,891,1524
est106=AFA596Z,892,1534
est107=AFO583Z,892,1524
est108=SFL195Z,898,1512
est109=AFE726Z,900,1525
est110=AFC858Z,902,1525
est111=SFD707Z,904,1517
est112=AFI606Z,906,1535
est113=AFC552Z,909,1525
est114=SFJ357Z,910,1524
est115=AFO404Z,912,1529
est116=VFB232Z,923,1510
est117=SFK605Z,929,1515
est118=AFD359Z,932,1534
est119=AFA372Z,951,1521
est120=AFB490Z,970,1525
est121=AFC460Z,1003,1533
est122=SLF463Z,1050,1558
est123=AFC110Z,1062,1525
est124=AFA685Z,1069,1525
est125=SFE884Z,1077,1524
est126=SFB215Z,1095,1523
est127=AFJ794Z,1098,1521
est128=CFD624Z,1109,1317
est129=AFF746Z,1113,1527
est130=AFI433Z,1127,1524
est131=AFE702Z,1134,1524
est132=SLC513Z,1184,1611
est133=CFB680Z,1220,1512
est134=CFC332Z,1225,1523
est135=SFJ121Z,1228,1516
est136=AFB792Z,1232,1525
est137=AFH850Z,1235,1528
est138=AFK353Z,1236,1524
est139=SFL472Z,1238,1513
est140=SFA812Z,1239,1516
est141=SFH877Z,1240,1523
est142=SFB134Z,1243,1517
est143=VFE249Z,1245,1527
est144=AFJ486Z,1246,1521
est145=CFD376Z,1246,1515
est146=SFF829Z,1246,1524
est147=SFG344Z,1246,1513
est148=CFF630Z,1248,1528
est149=SFF802Z,1248,1518
est150=AFF250Z,1249,1525
est151=SFG557Z,1249,1513
est152=AFB418Z,1252,1525
est153=AFC784Z,1252,1539
est154=AFF811Z,1253,1530
est155=AFD346Z,1254,1534
est156=AFH129Z,1255,1533
est157=AFK423Z,1256,1522
est158=AFB355Z,1258,1529
est159=AFG411Z,1258,1525
est160=AFH116Z,1258,1457
est161=AFJ136Z,1259,1524
est162=AFK150Z,1260,1526
est163=AFC866Z,1261,1525
est164=CFI754Z,1261,1510
est165=AFG207Z,1262,1526
est166=AFE670Z,1267,1534
est167=AFF219Z,1267,1528
est168=AFE301Z,1268,1532
est169=SHL848F,1275,1566
est170=SHL848Z,1275,1523
est171=AFH136Z,1298,1529
est172=SFH584Z,1311,1479
est173=SLH879E,1342,1557
est174=SFF183Z,1374,1513
Translated Amino Acid sequence
irpy*vgntssrsi**vnrpqafqvlwlettgehrvlytiflntlthk*ylsiyphtqsi
hingrnnnin*k*kfhsskfttrsns*rskt*sri*nhnfseqssfnt*wksir**keii
rlfn*rw*flidnkkcfkstttkitttpttttttttttttsttkrssqfttryfrplykq
s*rlnssykfkssiskcnlk*ryeipyslcrtnqrttsysrigikrsiwwksikn*LINI
FNNKILKKICNMLWNIHPEVFASVYMLYIECSINGHPLKAFVDTGAQQXIMSEKCAERCE
ISRIIDTRFHGIAKGVGTSKIIGRVHSTDLKLGNSLFSVSLSILQNQDVDFILGLDMLKR
HQVILDLNRGVLQIANEKIEFLHEKDLKEILNKEQNDLEEDTKKATANSLSPSTTSTTTT
TTTTTSPQTPTNATSPVNNNNNNNNNNNNTRPPINSPPVAKTPQPTPQPTTNQYASESNI
QTLIGLGCSRDKAIRLLTQAKGQC*cccfyvlwlikkvkkkkkkikihntydck*n


Translated Amino Acid sequence (All Frames)
Frame A:
vyghtrlethhpvrsdk*idlrpskysgwrqqgnigccilff*th*hinniylsihtpkv
filmaeitisienenfiqvnlqpdqtvedlkrrvefettilvnnqvltldgkvldnekkl
sdysikggdfllitknvlrapqqrsqqpqqpqqpqqpqqqrqpqrdplnspqdildhftn
npedltqvinsnpalanailskdmkflthfveqikeqrriqelalkdpyggrvskislst
ysttky*kkyatcygtytlkylpqficyilnvqlmdih*kll*iqvpnnxlclknvpkda
kfqellildfmvllkvwvhqkl*vefivqt*nlatlyslyhylsfkikmltsslvwic*s
viksfwi*ievyyklqmkrlnsfmkki*rrf*iknkmi*kkilkkqllivfhlqqlqplp
lplpllhpklqlmplll*iiiiiiitttttldlqlihhqlqrhrnqhhnqlqinmllnpi
skplldlvvqeirqldf*lklkgnvdvaasmffg**kk*kkkkkk*ryitpmivnkt


Frame B:
ytailgwkhiipfdliskstsglpstlvgdnrgt*gavyyffkhtnt*iifiylsthpky
sy*wqk*qyqlkmkisfk*iynqikqlki*nve*nlkpqf**tikf*hlmeky*imkrny
qtiqlkvvisy**qkmf*ehhnkdhnnpnnhnnhnnhnnnvnhkeilsihhkif*ttlqt
ilkt*lkl*iqiqh*qmqs*vki*nslltl*nksknnvvfknwh*kihmveeyqklayqh
iqqqnieknmqhamehtp*siclslyviy*mfn*wtsiksfcryrcptxyyv*kmcrkmr
nfkny*y*iswyc*rcgyiknyr*ss*yrlktwqlfilciiiypsksrc*lhpwfgyvka
ssshfgfk*rcitnck*kd*ips*krfkgdfk*rtk*frrry*ksnc**sftfnnfnhyh
yhyhyftpnsn*chfsck*******qqqqh*tsn*fttsckdtatntttnyksicf*iqy
pnpywtwlfkr*gn*tfnss*ramlmllllcslvnkkskkkkkknkdt*hl*l*ik


Frame C:
irpy*vgntssrsi**vnrpqafqvlwlettgehrvlytiflntlthk*ylsiyphtqsi
hingrnnnin*k*kfhsskfttrsns*rskt*sri*nhnfseqssfnt*wksir**keii
rlfn*rw*flidnkkcfkstttkitttpttttttttttttsttkrssqfttryfrplykq
s*rlnssykfkssiskcnlk*ryeipyslcrtnqrttsysrigikrsiwwksikn*LINI
FNNKILKKICNMLWNIHPEVFASVYMLYIECSINGHPLKAFVDTGAQQXIMSEKCAERCE
ISRIIDTRFHGIAKGVGTSKIIGRVHSTDLKLGNSLFSVSLSILQNQDVDFILGLDMLKR
HQVILDLNRGVLQIANEKIEFLHEKDLKEILNKEQNDLEEDTKKATANSLSPSTTSTTTT
TTTTTSPQTPTNATSPVNNNNNNNNNNNNTRPPINSPPVAKTPQPTPQPTTNQYASESNI
QTLIGLGCSRDKAIRLLTQAKGQC*cccfyvlwlikkvkkkkkkikihntydck*n


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U16317-1 (Contig-U16317-1Q)
/CSM_Contig/Contig-U16317-1Q.Seq.d
(1611 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U16317-1 (Contig-U16317-1Q) /CSM_Contig/Conti... 1576 0.0
Contig-U16244-1 (Contig-U16244-1Q) /CSM_Contig/Conti... 238 2e-62
Contig-U15687-1 (Contig-U15687-1Q) /CSM_Contig/Conti... 238 2e-62
Contig-U15683-1 (Contig-U15683-1Q) /CSM_Contig/Conti... 238 2e-62
Contig-U15310-1 (Contig-U15310-1Q) /CSM_Contig/Conti... 238 2e-62
Contig-U12475-1 (Contig-U12475-1Q) /CSM_Contig/Conti... 238 2e-62
Contig-U11551-1 (Contig-U11551-1Q) /CSM_Contig/Conti... 238 2e-62
Contig-U16395-1 (Contig-U16395-1Q) /CSM_Contig/Conti... 236 9e-62
Contig-U15787-1 (Contig-U15787-1Q) /CSM_Contig/Conti... 236 9e-62
Contig-U16322-1 (Contig-U16322-1Q) /CSM_Contig/Conti... 234 3e-61

>Contig-U16317-1 (Contig-U16317-1Q) /CSM_Contig/Contig-U16317-1Q.Seq.d
Length = 1611

Score = 1576 bits (795), Expect = 0.0
Identities = 812/819 (99%)
Strand = Plus / Plus


Query: 493 agagatcctctcaattcaccacaagatattttagaccactttacaaacaatcctgaagac 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agagatcctctcaattcaccacaagatattttagaccactttacaaacaatcctgaagac 552


Query: 553 ttaactcaagttataaattcaaatccagcattagcaaatgcaatcttaagtaaagatatg 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ttaactcaagttataaattcaaatccagcattagcaaatgcaatcttaagtaaagatatg 612


Query: 613 aaattccttactcactttgtagaacaaatcaaagaacaacgtcgtattcaagaattggca 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aaattccttactcactttgtagaacaaatcaaagaacaacgtcgtattcaagaattggca 672


Query: 673 ttaaaagatccatatggtggaagagtatcaaaaattagcttatcaacatattcaacaaca 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ttaaaagatccatatggtggaagagtatcaaaaattagcttatcaacatattcaacaaca 732


Query: 733 aaatattgnnnnnnntatgcaacatgctatggaacatacaccctgaagtatttgcctcag 792
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 aaatattgaaaaaaatatgcaacatgctatggaacatacaccctgaagtatttgcctcag 792


Query: 793 tttatatgttatatattgaatgttcaattaatggacatccattaaaagcttttgtagata 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 tttatatgttatatattgaatgttcaattaatggacatccattaaaagcttttgtagata 852


Query: 853 caggtgcccaacaatntattatgtctgaaaaatgtgccgaaagatgcgaaatttcaagaa 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 caggtgcccaacaatntattatgtctgaaaaatgtgccgaaagatgcgaaatttcaagaa 912


Query: 913 ttattgatactagatttcatggtattgctaaaggtgtgggtacatcaaaaattataggta 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 ttattgatactagatttcatggtattgctaaaggtgtgggtacatcaaaaattataggta 972


Query: 973 gagttcatagtacagacttaaaacttggcaactctttattctctgtatcattatctatcc 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 gagttcatagtacagacttaaaacttggcaactctttattctctgtatcattatctatcc 1032


Query: 1033 ttcaaaatcaagatgttgacttcatccttggtttggatatgttaaagcgtcatcaagtca 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 ttcaaaatcaagatgttgacttcatccttggtttggatatgttaaagcgtcatcaagtca 1092


Query: 1093 ttttggatttaaatagaggtgtattacaaattgcaaatgaaaagattgaattccttcatg 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 ttttggatttaaatagaggtgtattacaaattgcaaatgaaaagattgaattccttcatg 1152


Query: 1153 aaaaagatttaaaggagattttaaataaagaacaaaatgatttagaagaagatactaaaa 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 aaaaagatttaaaggagattttaaataaagaacaaaatgatttagaagaagatactaaaa 1212


Query: 1213 aagcaactgctaatagtctttcaccttcaacaacttcaaccactaccactaccactacca 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1213 aagcaactgctaatagtctttcaccttcaacaacttcaaccactaccactaccactacca 1272


Query: 1273 ctacttcaccccaaactccaactaatgccacttctcctg 1311
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1273 ctacttcaccccaaactccaactaatgccacttctcctg 1311


Score = 787 bits (397), Expect = 0.0
Identities = 411/418 (98%)
Strand = Plus / Plus


Query: 1 gtatacggccatactaggttggaaacacatcatcccgttcgatctgataagtaaatcgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtatacggccatactaggttggaaacacatcatcccgttcgatctgataagtaaatcgac 60


Query: 61 ctcaggccttccaagtactctggttggagacaacaggggaacatagggtgctgtatacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcaggccttccaagtactctggttggagacaacaggggaacatagggtgctgtatacta 120


Query: 121 nnnnnnnaaacacactaacacataaataatatttatctatctatccacacacccaaagta 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttttttaaacacactaacacataaataatatttatctatctatccacacacccaaagta 180


Query: 181 ttcatattaatggcagaaataacaatatcaattgaaaatgaaaatttcattcaagtaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcatattaatggcagaaataacaatatcaattgaaaatgaaaatttcattcaagtaaat 240


Query: 241 ttacaaccagatcaaacagttgaagatctaaaacgtagagtagaatttgaaaccacaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttacaaccagatcaaacagttgaagatctaaaacgtagagtagaatttgaaaccacaatt 300


Query: 301 ttagtgaacaatcaagttttaacacttgatggaaaagtattagataatgaaaagaaatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttagtgaacaatcaagttttaacacttgatggaaaagtattagataatgaaaagaaatta 360


Query: 361 tcagactattcaattaaaggtggtgatttcttattgataacaaaaaatgttttaagag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcagactattcaattaaaggtggtgatttcttattgataacaaaaaatgttttaagag 418


Score = 416 bits (210), Expect = e-116
Identities = 210/210 (100%)
Strand = Plus / Plus


Query: 1337 caacaacaacaacactagacctccaattaattcaccaccagttgcaaagacaccgcaacc 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 caacaacaacaacactagacctccaattaattcaccaccagttgcaaagacaccgcaacc 1396


Query: 1397 aacaccacaaccaactacaaatcaatatgcttctgaatccaatatccaaacccttattgg 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1397 aacaccacaaccaactacaaatcaatatgcttctgaatccaatatccaaacccttattgg 1456


Query: 1457 acttggttgttcaagagataaggcaattagacttttaactcaagctaaagggcaatgttg 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1457 acttggttgttcaagagataaggcaattagacttttaactcaagctaaagggcaatgttg 1516


Query: 1517 atgttgctgcttctatgttctttggttaat 1546
||||||||||||||||||||||||||||||
Sbjct: 1517 atgttgctgcttctatgttctttggttaat 1546


Score = 71.9 bits (36), Expect = 3e-12
Identities = 36/36 (100%)
Strand = Plus / Plus


Query: 1576 taaagatacataacacctatgattgtaaataaaaca 1611
||||||||||||||||||||||||||||||||||||
Sbjct: 1576 taaagatacataacacctatgattgtaaataaaaca 1611


>Contig-U16244-1 (Contig-U16244-1Q) /CSM_Contig/Contig-U16244-1Q.Seq.d
Length = 1023

Score = 238 bits (120), Expect = 2e-62
Identities = 120/120 (100%)
Strand = Plus / Plus


Query: 1 gtatacggccatactaggttggaaacacatcatcccgttcgatctgataagtaaatcgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 gtatacggccatactaggttggaaacacatcatcccgttcgatctgataagtaaatcgac 75


Query: 61 ctcaggccttccaagtactctggttggagacaacaggggaacatagggtgctgtatacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 ctcaggccttccaagtactctggttggagacaacaggggaacatagggtgctgtatacta 135


>Contig-U15687-1 (Contig-U15687-1Q) /CSM_Contig/Contig-U15687-1Q.Seq.d
Length = 2594

Score = 238 bits (120), Expect = 2e-62
Identities = 120/120 (100%)
Strand = Plus / Plus


Query: 1 gtatacggccatactaggttggaaacacatcatcccgttcgatctgataagtaaatcgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtatacggccatactaggttggaaacacatcatcccgttcgatctgataagtaaatcgac 60


Query: 61 ctcaggccttccaagtactctggttggagacaacaggggaacatagggtgctgtatacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcaggccttccaagtactctggttggagacaacaggggaacatagggtgctgtatacta 120


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 39,218
Number of Sequences: 8402
Number of extensions: 39218
Number of successful extensions: 10602
Number of sequences better than 10.0: 292
length of query: 1611
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1595
effective length of database: 7,941,110
effective search space: 12666070450
effective search space used: 12666070450
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 3.27
Homology vs DNA
Query= Contig-U16317-1 (Contig-U16317-1Q) /CSM_Contig/Contig-U16317-1Q.Seq.d
(1611 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ375034) Dictyostelium discoideum cDNA clone:ddc17n03, 3' ... 716 0.0 4
(BJ390352) Dictyostelium discoideum cDNA clone:dds22i02, 5' ... 565 0.0 4
(AU060984) Dictyostelium discoideum slug cDNA, clone SLC513. 541 0.0 5
(BJ325896) Dictyostelium discoideum cDNA clone:dda2i22, 5' e... 515 0.0 6
(BJ325168) Dictyostelium discoideum cDNA clone:dda13f04, 5' ... 577 0.0 4
(BJ325910) Dictyostelium discoideum cDNA clone:dda2o23, 5' e... 531 0.0 6
(BJ325186) Dictyostelium discoideum cDNA clone:dda13m02, 5' ... 452 0.0 5
(BJ362274) Dictyostelium discoideum cDNA clone:ddc21i01, 5' ... 577 0.0 4
(BJ327166) Dictyostelium discoideum cDNA clone:dda19n10, 5' ... 577 0.0 4
(BJ324588) Dictyostelium discoideum cDNA clone:dda7d03, 5' e... 577 0.0 4
(BJ327290) Dictyostelium discoideum cDNA clone:dda19l22, 5' ... 577 0.0 4
(BJ324143) Dictyostelium discoideum cDNA clone:dda5c03, 5' e... 577 0.0 4
(BJ329102) Dictyostelium discoideum cDNA clone:dda30e21, 5' ... 577 0.0 4
(BJ324522) Dictyostelium discoideum cDNA clone:dda6p14, 5' e... 577 0.0 4
(BJ326289) Dictyostelium discoideum cDNA clone:dda15o03, 5' ... 577 0.0 4
(BJ324665) Dictyostelium discoideum cDNA clone:dda7l11, 5' e... 577 0.0 4
(BJ387037) Dictyostelium discoideum cDNA clone:dds12d02, 5' ... 577 0.0 4
(BJ325145) Dictyostelium discoideum cDNA clone:dda9o23, 5' e... 577 0.0 4
(BJ386823) Dictyostelium discoideum cDNA clone:dds10h22, 5' ... 577 0.0 4
(BJ361763) Dictyostelium discoideum cDNA clone:ddc18l13, 5' ... 577 0.0 4
(BJ328686) Dictyostelium discoideum cDNA clone:dda29h02, 5' ... 577 0.0 4
(BJ323372) Dictyostelium discoideum cDNA clone:dda10d07, 5' ... 577 0.0 4
(BJ431126) Dictyostelium discoideum cDNA clone:ddv9o23, 3' e... 543 0.0 4
(BJ330227) Dictyostelium discoideum cDNA clone:dda27e22, 5' ... 565 0.0 4
(BJ324700) Dictyostelium discoideum cDNA clone:dda7f15, 5' e... 577 0.0 4
(BJ329759) Dictyostelium discoideum cDNA clone:dda26n04, 5' ... 577 0.0 4
(BJ329218) Dictyostelium discoideum cDNA clone:dda24p04, 5' ... 577 0.0 4
(BJ327969) Dictyostelium discoideum cDNA clone:dda22m12, 5' ... 577 0.0 4
(BJ412813) Dictyostelium discoideum cDNA clone:ddv9o23, 5' e... 577 0.0 4
(BJ329181) Dictyostelium discoideum cDNA clone:dda24h02, 5' ... 577 0.0 4
(BJ328214) Dictyostelium discoideum cDNA clone:dda23i10, 5' ... 577 0.0 4
(BJ390335) Dictyostelium discoideum cDNA clone:dds22f01, 5' ... 577 0.0 4
(BJ389846) Dictyostelium discoideum cDNA clone:dds20d09, 5' ... 577 0.0 4
(BJ329249) Dictyostelium discoideum cDNA clone:dda24g08, 5' ... 565 0.0 4
(BJ361447) Dictyostelium discoideum cDNA clone:ddc17n03, 5' ... 577 0.0 4
(BJ390977) Dictyostelium discoideum cDNA clone:dds14a15, 5' ... 569 0.0 4
(BJ327306) Dictyostelium discoideum cDNA clone:dda19p22, 5' ... 567 0.0 4
(BJ328416) Dictyostelium discoideum cDNA clone:dda28h04, 5' ... 549 0.0 5
(BJ326818) Dictyostelium discoideum cDNA clone:dda18k02, 5' ... 559 0.0 4
(BJ389782) Dictyostelium discoideum cDNA clone:dds20d06, 5' ... 559 0.0 4
(BJ323746) Dictyostelium discoideum cDNA clone:dda12f04, 5' ... 577 0.0 3
(BJ347127) Dictyostelium discoideum cDNA clone:dda26n04, 3' ... 551 0.0 3
(BJ341451) Dictyostelium discoideum cDNA clone:dda6p14, 3' e... 513 0.0 4
(BJ376545) Dictyostelium discoideum cDNA clone:ddc28p19, 3' ... 537 0.0 3
(BJ345844) Dictyostelium discoideum cDNA clone:dda29b07, 3' ... 494 0.0 4
(BJ387527) Dictyostelium discoideum cDNA clone:dds3m04, 5' e... 531 0.0 4
(BJ362694) Dictyostelium discoideum cDNA clone:ddc23g05, 5' ... 577 0.0 3
(BJ323315) Dictyostelium discoideum cDNA clone:dda10d01, 5' ... 577 0.0 3
(BJ362822) Dictyostelium discoideum cDNA clone:ddc23k18, 5' ... 577 0.0 3
(BJ323532) Dictyostelium discoideum cDNA clone:dda11e06, 5' ... 523 0.0 4
(BJ377228) Dictyostelium discoideum cDNA clone:ddc22g05, 3' ... 539 0.0 4
(BJ323635) Dictyostelium discoideum cDNA clone:dda11c14, 5' ... 577 0.0 3
(BJ387104) Dictyostelium discoideum cDNA clone:dds12j08, 5' ... 577 0.0 3
(BJ324487) Dictyostelium discoideum cDNA clone:dda6d18, 5' e... 577 0.0 3
(BJ344473) Dictyostelium discoideum cDNA clone:dda19n10, 3' ... 573 0.0 5
(BJ326065) Dictyostelium discoideum cDNA clone:dda3n13, 5' e... 577 0.0 3
(BJ402046) Dictyostelium discoideum cDNA clone:dds20d09, 3' ... 521 0.0 5
(BJ342216) Dictyostelium discoideum cDNA clone:dda9o23, 3' e... 494 0.0 4
(BJ360840) Dictyostelium discoideum cDNA clone:ddc8o06, 5' e... 577 0.0 3
(BJ327562) Dictyostelium discoideum cDNA clone:dda20l23, 5' ... 577 0.0 3
(BJ325498) Dictyostelium discoideum cDNA clone:dda14h22, 5' ... 507 0.0 4
(BJ401378) Dictyostelium discoideum cDNA clone:dds23e04, 3' ... 555 0.0 4
(BJ389534) Dictyostelium discoideum cDNA clone:dds19i05, 5' ... 517 0.0 4
(BJ376070) Dictyostelium discoideum cDNA clone:ddc21i01, 3' ... 482 0.0 4
(BJ340600) Dictyostelium discoideum cDNA clone:dda2o23, 3' e... 476 0.0 4
(BJ327722) Dictyostelium discoideum cDNA clone:dda21c13, 5' ... 565 0.0 4
(BJ401984) Dictyostelium discoideum cDNA clone:dds20d06, 3' ... 496 0.0 5
(BJ377112) Dictyostelium discoideum cDNA clone:ddc22k18, 3' ... 509 0.0 4
(BJ327238) Dictyostelium discoideum cDNA clone:dda19p16, 5' ... 577 0.0 3
(BJ344631) Dictyostelium discoideum cDNA clone:dda19p22, 3' ... 583 0.0 3
(BJ330261) Dictyostelium discoideum cDNA clone:dda27m23, 5' ... 577 0.0 3
(BJ344551) Dictyostelium discoideum cDNA clone:dda19p16, 3' ... 523 0.0 5
(BJ345566) Dictyostelium discoideum cDNA clone:dda28h04, 3' ... 482 0.0 4
(BJ387545) Dictyostelium discoideum cDNA clone:dds3c09, 5' e... 577 0.0 3
(BJ324112) Dictyostelium discoideum cDNA clone:dda4h23, 5' e... 571 0.0 3
(BJ346398) Dictyostelium discoideum cDNA clone:dda30e21, 3' ... 492 0.0 3
(BJ327633) Dictyostelium discoideum cDNA clone:dda21n06, 5' ... 569 0.0 3
(BJ323820) Dictyostelium discoideum cDNA clone:dda12l11, 5' ... 577 0.0 2
(BJ399956) Dictyostelium discoideum cDNA clone:dds8n01, 3' e... 468 0.0 3
(BJ388156) Dictyostelium discoideum cDNA clone:dds8n01, 5' e... 569 0.0 2
(BJ326450) Dictyostelium discoideum cDNA clone:dda16d14, 5' ... 577 0.0 2
(BJ323451) Dictyostelium discoideum cDNA clone:dda10k18, 5' ... 577 0.0 2
(BJ341526) Dictyostelium discoideum cDNA clone:dda7d03, 3' e... 452 0.0 5
(BJ347712) Dictyostelium discoideum cDNA clone:dda27m23, 3' ... 450 0.0 4
(BJ401638) Dictyostelium discoideum cDNA clone:dds23m23, 3' ... 476 0.0 4
(BJ363884) Dictyostelium discoideum cDNA clone:ddc28p19, 5' ... 577 0.0 2
(BJ347668) Dictyostelium discoideum cDNA clone:dda27e22, 3' ... 418 0.0 4
(BJ324281) Dictyostelium discoideum cDNA clone:dda5h16, 5' e... 559 0.0 2
(BJ390608) Dictyostelium discoideum cDNA clone:dds23e04, 5' ... 577 0.0 4
(BJ390787) Dictyostelium discoideum cDNA clone:dds23p18, 5' ... 577 0.0 4
(BJ401819) Dictyostelium discoideum cDNA clone:dds19b15, 3' ... 402 0.0 4
(BJ324977) Dictyostelium discoideum cDNA clone:dda9b01, 5' e... 410 0.0 3
(BJ390844) Dictyostelium discoideum cDNA clone:dds23m23, 5' ... 345 0.0 4
(BJ411213) Dictyostelium discoideum cDNA clone:ddv3o08, 5' e... 498 0.0 3
(BJ361088) Dictyostelium discoideum cDNA clone:ddc9d19, 5' e... 577 0.0 2
(BJ339759) Dictyostelium discoideum cDNA clone:dda10d07, 3' ... 383 0.0 3
(BJ360306) Dictyostelium discoideum cDNA clone:ddc5p07, 5' e... 577 0.0 2
(BJ391340) Dictyostelium discoideum cDNA clone:dds13h11, 5' ... 577 0.0 2
(BJ326080) Dictyostelium discoideum cDNA clone:dda3d24, 5' e... 573 0.0 2
(BJ401071) Dictyostelium discoideum cDNA clone:dds22f01, 3' ... 363 0.0 4
(BJ327635) Dictyostelium discoideum cDNA clone:dda21o02, 5' ... 505 0.0 2
(BJ389633) Dictyostelium discoideum cDNA clone:dds19b15, 5' ... 577 0.0 2
(BJ341421) Dictyostelium discoideum cDNA clone:dda6g13, 3' e... 339 0.0 4
(BJ325927) Dictyostelium discoideum cDNA clone:dda3d06, 5' e... 515 0.0 2
(BJ341643) Dictyostelium discoideum cDNA clone:dda7f15, 3' e... 339 0.0 4
(BJ327746) Dictyostelium discoideum cDNA clone:dda21j13, 5' ... 561 0.0 2
(BJ388933) Dictyostelium discoideum cDNA clone:dds16g21, 5' ... 278 0.0 5
(BJ324496) Dictyostelium discoideum cDNA clone:dda6g13, 5' e... 577 0.0 2
(BJ344324) Dictyostelium discoideum cDNA clone:dda18k02, 3' ... 339 0.0 5
(BJ401088) Dictyostelium discoideum cDNA clone:dds22i02, 3' ... 339 0.0 5
(AU052991) Dictyostelium discoideum slug cDNA, clone SLF463. 339 0.0 4
(BJ342617) Dictyostelium discoideum cDNA clone:dda14h22, 3' ... 339 0.0 5
(BJ340769) Dictyostelium discoideum cDNA clone:dda3d24, 3' e... 339 0.0 3
(BJ341406) Dictyostelium discoideum cDNA clone:dda6d16, 3' e... 339 0.0 4
(BJ346522) Dictyostelium discoideum cDNA clone:dda24p04, 3' ... 339 0.0 4
(BJ346094) Dictyostelium discoideum cDNA clone:dda29h02, 3' ... 339 0.0 4
(BJ325635) Dictyostelium discoideum cDNA clone:dda1p17, 5' e... 577 0.0 2
(BJ324485) Dictyostelium discoideum cDNA clone:dda6d16, 5' e... 577 0.0 2
(BJ342817) Dictyostelium discoideum cDNA clone:dda1p17, 3' e... 307 0.0 5
(BJ412682) Dictyostelium discoideum cDNA clone:ddv9a14, 5' e... 577 0.0 2
(BJ324547) Dictyostelium discoideum cDNA clone:dda6h21, 5' e... 577 0.0 2
(BJ326130) Dictyostelium discoideum cDNA clone:dda15i07, 5' ... 577 0.0 2
(BJ345328) Dictyostelium discoideum cDNA clone:dda23i10, 3' ... 654 0.0 2
(BJ341190) Dictyostelium discoideum cDNA clone:dda5h16, 3' e... 339 0.0 4
(BJ429428) Dictyostelium discoideum cDNA clone:ddv3o08, 3' e... 307 0.0 4
(AU034579) Dictyostelium discoideum slug cDNA, clone SLC513. 339 e-172 4
(BJ398071) Dictyostelium discoideum cDNA clone:dds10h22, 3' ... 339 e-172 4
(BJ360204) Dictyostelium discoideum cDNA clone:ddc4o20, 5' e... 577 e-165 2
(BJ341050) Dictyostelium discoideum cDNA clone:dda5c03, 3' e... 339 e-157 3
(BJ340587) Dictyostelium discoideum cDNA clone:dda2i22, 3' e... 339 e-144 3
(BJ343806) Dictyostelium discoideum cDNA clone:dda17b10, 3' ... 339 e-143 3
(BJ343230) Dictyostelium discoideum cDNA clone:dda22m12, 3' ... 515 e-141 1
(BJ398928) Dictyostelium discoideum cDNA clone:dds3m04, 3' e... 339 e-140 5
(BJ339692) Dictyostelium discoideum cDNA clone:dda10d01, 3' ... 331 e-139 3
(BJ344901) Dictyostelium discoideum cDNA clone:dda20l23, 3' ... 301 e-135 4
(BJ327141) Dictyostelium discoideum cDNA clone:dda19g09, 5' ... 494 e-135 1
(BJ373934) Dictyostelium discoideum cDNA clone:ddc5p07, 3' e... 339 e-134 2
(BJ341480) Dictyostelium discoideum cDNA clone:dda6h21, 3' e... 339 e-130 3
(BJ430988) Dictyostelium discoideum cDNA clone:ddv9a14, 3' e... 339 e-129 3
(BJ340276) Dictyostelium discoideum cDNA clone:dda12l11, 3' ... 327 e-128 2
(BJ346559) Dictyostelium discoideum cDNA clone:dda24g08, 3' ... 297 e-127 4
(BJ372380) Dictyostelium discoideum cDNA clone:ddc12k08, 3' ... 339 e-126 3
(BJ398415) Dictyostelium discoideum cDNA clone:dds12j08, 3' ... 339 e-126 3
(BJ341607) Dictyostelium discoideum cDNA clone:dda7l11, 3' e... 339 e-126 3
(BJ401695) Dictyostelium discoideum cDNA clone:dds19i05, 3' ... 339 e-125 2
(BJ373779) Dictyostelium discoideum cDNA clone:ddc4o20, 3' e... 305 e-125 2
(BJ340069) Dictyostelium discoideum cDNA clone:dda11c14, 3' ... 339 e-124 2
(BJ340750) Dictyostelium discoideum cDNA clone:dda3n13, 3' e... 355 e-124 2
(BJ402423) Dictyostelium discoideum cDNA clone:dds16j20, 3' ... 339 e-123 2
(BJ343580) Dictyostelium discoideum cDNA clone:dda16d14, 3' ... 339 e-122 2
(BJ374444) Dictyostelium discoideum cDNA clone:ddc7h19, 3' e... 343 e-122 2
(BJ398761) Dictyostelium discoideum cDNA clone:dds2h04, 3' e... 339 e-121 2
(BJ340615) Dictyostelium discoideum cDNA clone:dda3d06, 3' e... 339 e-121 2
(BJ398328) Dictyostelium discoideum cDNA clone:dds12d02, 3' ... 339 e-120 2
(BJ342241) Dictyostelium discoideum cDNA clone:dda13f04, 3' ... 339 e-119 2
(BJ339846) Dictyostelium discoideum cDNA clone:dda10k18, 3' ... 339 e-119 3
(BJ342907) Dictyostelium discoideum cDNA clone:dda15i07, 3' ... 339 e-118 2
(BJ398944) Dictyostelium discoideum cDNA clone:dds3c09, 3' e... 339 e-118 2
(BJ400722) Dictyostelium discoideum cDNA clone:dds14a15, 3' ... 339 e-118 2
(BJ341408) Dictyostelium discoideum cDNA clone:dda6d18, 3' e... 339 e-118 2
(BJ397758) Dictyostelium discoideum cDNA clone:dds47p12, 5' ... 339 e-117 3
(BJ341976) Dictyostelium discoideum cDNA clone:dda9b01, 3' e... 339 e-117 3
(BJ341020) Dictyostelium discoideum cDNA clone:dda4h23, 3' e... 311 e-117 4
(BJ340194) Dictyostelium discoideum cDNA clone:dda12f04, 3' ... 333 e-117 2
(BJ342262) Dictyostelium discoideum cDNA clone:dda13m02, 3' ... 339 e-117 2
(BJ400451) Dictyostelium discoideum cDNA clone:dds13h11, 3' ... 311 e-116 3
(BJ345071) Dictyostelium discoideum cDNA clone:dda21c13, 3' ... 327 e-114 2
(BJ345101) Dictyostelium discoideum cDNA clone:dda21j13, 3' ... 303 e-114 3
(BJ339944) Dictyostelium discoideum cDNA clone:dda11e06, 3' ... 339 e-114 2
(BJ344609) Dictyostelium discoideum cDNA clone:dda19l22, 3' ... 293 e-111 3
(BJ375418) Dictyostelium discoideum cDNA clone:ddc18l13, 3' ... 325 e-108 2
(BJ344977) Dictyostelium discoideum cDNA clone:dda21n06, 3' ... 293 e-108 3
(BJ344443) Dictyostelium discoideum cDNA clone:dda19g09, 3' ... 303 e-108 3
(BJ401575) Dictyostelium discoideum cDNA clone:dds23p18, 3' ... 276 e-105 3
(AU039488) Dictyostelium discoideum slug cDNA, clone SLH879. 333 e-104 2
(BJ408941) Dictyostelium discoideum cDNA clone:dds47p12, 3' ... 339 e-103 3
(BJ341520) Dictyostelium discoideum cDNA clone:dda7c03, 3' e... 321 9e-89 2
(BJ342900) Dictyostelium discoideum cDNA clone:dda15g09, 3' ... 218 2e-87 3
(BJ342866) Dictyostelium discoideum cDNA clone:dda15o03, 3' ... 218 2e-83 2
(BJ326125) Dictyostelium discoideum cDNA clone:dda15g09, 5' ... 317 7e-82 1
(BJ388945) Dictyostelium discoideum cDNA clone:dds16j20, 5' ... 224 6e-75 3
(BJ402417) Dictyostelium discoideum cDNA clone:dds16g21, 3' ... 260 1e-64 1
(BJ374500) Dictyostelium discoideum cDNA clone:ddc8o06, 3' e... 137 8e-59 3
(BJ408039) Dictyostelium discoideum cDNA clone:dds44b16, 3' ... 238 5e-58 1
(BJ396935) Dictyostelium discoideum cDNA clone:dds44b16, 5' ... 238 5e-58 1
(BJ395509) Dictyostelium discoideum cDNA clone:dds39k01, 5' ... 238 5e-58 1
(BJ395009) Dictyostelium discoideum cDNA clone:dds37g10, 5' ... 238 5e-58 1
(BJ394327) Dictyostelium discoideum cDNA clone:dds34n18, 5' ... 238 5e-58 1
(BJ389589) Dictyostelium discoideum cDNA clone:dds19g08, 5' ... 238 5e-58 1
(BJ389479) Dictyostelium discoideum cDNA clone:dds18l23, 5' ... 238 5e-58 1
(BJ368837) Dictyostelium discoideum cDNA clone:ddc48d07, 5' ... 238 5e-58 1
(BJ368777) Dictyostelium discoideum cDNA clone:ddc48f02, 5' ... 238 5e-58 1
(BJ367703) Dictyostelium discoideum cDNA clone:ddc43n15, 5' ... 238 5e-58 1
(BJ365314) Dictyostelium discoideum cDNA clone:ddc34m20, 5' ... 238 5e-58 1
(BJ365187) Dictyostelium discoideum cDNA clone:ddc34m11, 5' ... 238 5e-58 1
(BJ360406) Dictyostelium discoideum cDNA clone:ddc5n23, 5' e... 238 5e-58 1
(BJ358398) Dictyostelium discoideum cDNA clone:ddc1j09, 5' e... 238 5e-58 1
(BJ339276) Dictyostelium discoideum cDNA clone:dda64c21, 5' ... 238 5e-58 1
(BJ337055) Dictyostelium discoideum cDNA clone:dda56h02, 5' ... 238 5e-58 1
(BJ336671) Dictyostelium discoideum cDNA clone:dda54p18, 5' ... 238 5e-58 1
(BJ332720) Dictyostelium discoideum cDNA clone:dda40h18, 5' ... 238 5e-58 1
(BJ332635) Dictyostelium discoideum cDNA clone:dda39e23, 5' ... 238 5e-58 1
(BJ330162) Dictyostelium discoideum cDNA clone:dda27h13, 5' ... 238 5e-58 1
(X67782) D.discoideum 5S ribosomal RNA gene. 236 2e-57 1
(V00191) 5S ribosomal RNA of slime mold (D. discoideum). 236 2e-57 1
(M25202) D.discoideum 5S rRNA. 236 2e-57 1
(DQ340385) Dictyostelium citrinum 17S ribosomal RNA, 5.8S ri... 236 2e-57 1
(AY171066) Dictyostelium discoideum extrachromosomal palindr... 236 2e-57 1
(BJ394688) Dictyostelium discoideum cDNA clone:dds36k05, 5' ... 236 2e-57 1
(BJ393528) Dictyostelium discoideum cDNA clone:dds31k18, 5' ... 236 2e-57 1
(BJ366111) Dictyostelium discoideum cDNA clone:ddc37d21, 5' ... 236 2e-57 1
(BJ365666) Dictyostelium discoideum cDNA clone:ddc36m02, 5' ... 236 2e-57 1
(BJ365013) Dictyostelium discoideum cDNA clone:ddc33g22, 5' ... 236 2e-57 1
(BJ361254) Dictyostelium discoideum cDNA clone:ddc16o07, 5' ... 236 2e-57 1
(BJ330279) Dictyostelium discoideum cDNA clone:dda31a04, 5' ... 236 2e-57 1
(BJ327784) Dictyostelium discoideum cDNA clone:dda21c19, 5' ... 236 2e-57 1
(BJ334709) Dictyostelium discoideum cDNA clone:dda47d13, 5' ... 234 8e-57 1
(BJ363622) Dictyostelium discoideum cDNA clone:ddc27j15, 5' ... 232 3e-56 1
(BJ387373) Dictyostelium discoideum cDNA clone:dds2h04, 5' e... 190 9e-56 2
(BJ334858) Dictyostelium discoideum cDNA clone:dda48f02, 5' ... 230 1e-55 1
(BJ331567) Dictyostelium discoideum cDNA clone:dda35m22, 5' ... 230 1e-55 1
(BJ414872) Dictyostelium discoideum cDNA clone:ddv20o14, 5' ... 224 8e-54 1
(BJ423385) Dictyostelium discoideum cDNA clone:ddv49c06, 5' ... 220 1e-52 1
(BJ368514) Dictyostelium discoideum cDNA clone:ddc47d02, 5' ... 218 5e-52 1
(BJ394057) Dictyostelium discoideum cDNA clone:dds33k15, 5' ... 194 5e-52 2
(BJ358632) Dictyostelium discoideum cDNA clone:ddc10g14, 5' ... 210 1e-49 1
(BJ387024) Dictyostelium discoideum cDNA clone:dds11o23, 5' ... 208 5e-49 1
(BJ368074) Dictyostelium discoideum cDNA clone:ddc45n02, 5' ... 208 5e-49 1
(BJ359722) Dictyostelium discoideum cDNA clone:ddc2l01, 5' e... 208 5e-49 1
(BJ324103) Dictyostelium discoideum cDNA clone:dda4d21, 5' e... 208 5e-49 1
(BJ328350) Dictyostelium discoideum cDNA clone:dda23i24, 5' ... 194 2e-45 2
(BJ398282) Dictyostelium discoideum cDNA clone:dds11e21, 3' ... 176 3e-44 2
(AY293825) Dictyostelium discoideum transposon cluster; tRNA... 192 3e-44 1
(BJ363077) Dictyostelium discoideum cDNA clone:ddc25a04, 5' ... 192 3e-44 1
(BJ338746) Dictyostelium discoideum cDNA clone:dda62i22, 5' ... 190 1e-43 1
(BJ442161) Dictyostelium discoideum cDNA clone:ddv49c06, 3' ... 153 2e-39 2
(BJ335137) Dictyostelium discoideum cDNA clone:dda49g02, 5' ... 151 1e-31 1
(BJ361707) Dictyostelium discoideum cDNA clone:ddc18l07, 5' ... 139 4e-28 1
(BJ388012) Dictyostelium discoideum cDNA clone:dds7l09, 5' e... 115 5e-21 1
(BJ421924) Dictyostelium discoideum cDNA clone:ddv44d08, 5' ... 103 2e-17 1
(BJ397824) Dictyostelium discoideum cDNA clone:dds47c24, 5' ... 90 3e-13 1
(BJ389480) Dictyostelium discoideum cDNA clone:dds18l24, 5' ... 72 7e-08 1
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 54 9e-07 10
(BJ328734) Dictyostelium discoideum cDNA clone:dda29b07, 5' ... 66 4e-06 1
(BJ350714) Dictyostelium discoideum cDNA clone:dda40d24, 3' ... 62 7e-05 1
(AC149162) Xenopus (Silurana) tropicalis clone ISB-362P17, c... 46 2e-04 2
(DR932385) EST1123924 Aquilegia cDNA library Aquilegia formo... 60 3e-04 1
(AQ935615) CpG2561B CpIOWAgDNA1 Cryptosporidium parvum genom... 54 9e-04 2
(DQ340386) Dictyostelium purpureum 17S ribosomal RNA, 5.8S r... 48 9e-04 2
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 58 0.001 1
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 58 0.001 1
(DH478742) Monosiga ovata DNA, fosmid clone: MOF-030F09, gen... 58 0.001 1
(BJ333453) Dictyostelium discoideum cDNA clone:dda42f20, 5' ... 58 0.001 1
(DB939122) Manihot esculenta mRNA, clone: CAS01_001_P01, 3'end. 52 0.003 2
(DV450071) CV02003A2D08.f1 CV02-normalized library Manihot e... 52 0.004 2
(AL935181) Zebrafish DNA sequence from clone CH211-162K9. 56 0.004 1
(AC197452) MACACA MULATTA BAC clone CH250-359J10 from chromo... 56 0.004 1
(EU094829) Humulus lupulus clone ACC3-I1-8 microsatellite se... 56 0.004 1
(EU115850) Dictyostelium discoideum Ddi2531 RNA, complete se... 56 0.004 1
(DQ008058) Manduca sexta amyloid precursor protein mRNA, com... 56 0.004 1
(AY484460) Dictyostelium discoideum kinesin family member 3 ... 56 0.004 1
(AY162212) Dictyostelium discoideum kinesin 1 gene, partial ... 56 0.004 1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 56 0.004 1
(AC113811) Rattus norvegicus clone CH230-216D16, *** SEQUENC... 56 0.004 1
(AC098951) Rattus norvegicus clone CH230-173E15, WORKING DRA... 56 0.004 1
(AC181364) Strongylocentrotus purpuratus clone R3-113H02, WO... 56 0.004 1
(AC181045) Strongylocentrotus purpuratus clone R3-3050I12, W... 56 0.004 1
(AC180305) Strongylocentrotus purpuratus clone R3-3119N05, W... 56 0.004 1
(AC177346) Strongylocentrotus purpuratus clone R3-46P4, WORK... 56 0.004 1
(AC177032) Strongylocentrotus purpuratus clone R3-38D6, WORK... 56 0.004 1
(EC853303) HDE00001292 Hyperamoeba dachnaya Non-normalized (... 56 0.004 1
(DB939913) Manihot esculenta mRNA, clone: CAS01_004_G06, 3'end. 52 0.005 2
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117... 44 0.005 9
(DB947958) Manihot esculenta mRNA, clone: CAS01_029_L02, 3'end. 52 0.005 2
(ER197365) 1095522321067 Global-Ocean-Sampling_GS-33-01-01-1... 52 0.006 2
(DE846921) Macropus eugenii DNA, BAC clone: MEB1-008K11_R, 3... 52 0.008 2
(AC201600) Strongylocentrotus purpuratus clone R3-50C18, WOR... 52 0.015 2
(CU207379) Mouse DNA sequence from clone CH29-505C15 on chro... 54 0.017 1
(CT030231) Mouse DNA sequence from clone RP24-331M15 on chro... 54 0.017 1
(CT010470) Mouse DNA sequence from clone RP23-313D12 on chro... 54 0.017 1
(AL645783) Mouse DNA sequence from clone RP23-459H16 on chro... 54 0.017 1
(AL590625) Mouse DNA sequence from clone RP23-467M8 on chrom... 54 0.017 1
(AC167021) Mus musculus BAC clone RP23-152D8 from chromosome... 54 0.017 1
(AC156033) Mus musculus BAC clone RP23-377G8 from chromosome... 54 0.017 1
(AC154355) Mus musculus BAC clone RP23-220N4 from 13, comple... 54 0.017 1
(AC153993) Mus musculus 6 BAC RP24-568N16 (Roswell Park Canc... 54 0.017 1
(AC153839) Mus musculus 6 BAC RP23-93A21 (Roswell Park Cance... 54 0.017 1
(AC121095) Mus musculus chromosome 14, clone RP24-324H17, co... 54 0.017 1
(AC118003) Mus musculus chromosome 5, clone RP23-146G20, com... 54 0.017 1
(AC116815) Mus musculus chromosome 5, clone RP24-357H22, com... 54 0.017 1
(AC115020) Mus musculus chromosome 1, clone RP24-231D14, com... 54 0.017 1
(EU094835) Humulus lupulus clone ACC2-E14-4 microsatellite s... 54 0.017 1
(AP008215) Oryza sativa (japonica cultivar-group) genomic DN... 54 0.017 1
(AP007167) Aspergillus oryzae RIB40 genomic DNA, SC020. 54 0.017 1
(AP005872) Oryza sativa Japonica Group genomic DNA, chromoso... 54 0.017 1
(AM446308) Vitis vinifera, whole genome shotgun sequence, co... 54 0.017 1
(U43183) Trypanosoma vivax diagnostic antigen gene, partial ... 54 0.017 1
(L25129) Trypanosoma vivax (ILDat 1.2) species-specific anti... 54 0.017 1
(AY764183) Aplysia californica syntaxin mRNA, complete cds. 54 0.017 1
(AC162362) Mus musculus chromosome 5 clone RP23-24M15 map 5,... 54 0.017 1
(AC157579) Mus musculus chromosome 1 clone RP23-14E16 map 1,... 54 0.017 1
(AC156547) Mus musculus chromosome 15 clone RP24-74I19 map 1... 54 0.017 1
(AC135039) Rattus norvegicus clone CH230-178I12, WORKING DRA... 54 0.017 1
(AC128909) Rattus norvegicus clone CH230-321C12, WORKING DRA... 54 0.017 1
(AC127156) Rattus norvegicus clone CH230-7B10, *** SEQUENCIN... 54 0.017 1
(AC119130) Rattus norvegicus clone CH230-414I23, *** SEQUENC... 54 0.017 1
(AC115510) Rattus norvegicus clone CH230-383C9, *** SEQUENCI... 54 0.017 1
(AC114113) Rattus norvegicus clone CH230-186O3, WORKING DRAF... 54 0.017 1
(AC112456) Rattus norvegicus clone CH230-110N23, *** SEQUENC... 54 0.017 1
(AC112086) Rattus norvegicus clone CH230-332D11, *** SEQUENC... 54 0.017 1
(AC111403) Rattus norvegicus clone CH230-95P17, WORKING DRAF... 54 0.017 1
(AC095424) Rattus norvegicus clone CH230-7A8, *** SEQUENCING... 54 0.017 1
(AC201355) Strongylocentrotus purpuratus clone R3-17B10, WOR... 54 0.017 1
(AC201189) Strongylocentrotus purpuratus clone R3-15A6, WORK... 54 0.017 1
(AC184882) Strongylocentrotus purpuratus clone R3-1015A21, W... 54 0.017 1
(AC184237) Strongylocentrotus purpuratus clone R3-3061A4, WO... 54 0.017 1
(AC184236) Strongylocentrotus purpuratus clone R3-3057P13, W... 54 0.017 1
(AC184210) Strongylocentrotus purpuratus clone R3-25L6, WORK... 54 0.017 1
(AC181787) Strongylocentrotus purpuratus clone R3-1030C18, W... 54 0.017 1
(AC181321) Strongylocentrotus purpuratus clone R3-115E19, WO... 54 0.017 1
(AC180852) Strongylocentrotus purpuratus clone R3-3068H12, W... 54 0.017 1
(AC180528) Strongylocentrotus purpuratus clone R3-3016G12, W... 54 0.017 1
(AC179960) Strongylocentrotus purpuratus clone R3-20J22, WOR... 54 0.017 1
(AC179911) Strongylocentrotus purpuratus clone R3-1003F14, W... 54 0.017 1
(AC179790) Strongylocentrotus purpuratus clone R3-1015B13, W... 54 0.017 1
(AC179481) Strongylocentrotus purpuratus clone R3-63M7, WORK... 54 0.017 1
(AC179039) Strongylocentrotus purpuratus clone R3-4005B22, W... 54 0.017 1
(AC177698) Strongylocentrotus purpuratus clone R3-1011O24, W... 54 0.017 1
(AC177333) Strongylocentrotus purpuratus clone R3-1032L15, W... 54 0.017 1
(AC177118) Strongylocentrotus purpuratus clone R3-4014D4, WO... 54 0.017 1
(AC176867) Strongylocentrotus purpuratus clone R3-31D6, WORK... 54 0.017 1
(AC176848) Strongylocentrotus purpuratus clone R3-1110H21, W... 54 0.017 1
(AC176035) Strongylocentrotus purpuratus clone R3-18I5, WORK... 54 0.017 1
(AC168612) Strongylocentrotus purpuratus clone R3-3046H17, W... 54 0.017 1
(AC168596) Strongylocentrotus purpuratus clone R3-3065C11, W... 54 0.017 1
(AC168542) Strongylocentrotus purpuratus clone R3-3091L20, W... 54 0.017 1
(AK275998) Gryllus bimaculatus mRNA, GBcontig22859. 54 0.017 1
(BH094533) RPCI-24-357H22.TV RPCI-24 Mus musculus genomic cl... 54 0.017 1
(AZ082714) RPCI-23-30L8.TV RPCI-23 Mus musculus genomic clon... 54 0.017 1
(DX992928) CHORI103-15E5.TJ CHORI103 Schistosoma mansoni gen... 54 0.017 1
(DH495191) Monosiga ovata DNA, fosmid clone: MOF-059A03, gen... 54 0.017 1
(DH495178) Monosiga ovata DNA, fosmid clone: MOF-058P17, gen... 54 0.017 1
(DH482896) Monosiga ovata DNA, fosmid clone: MOF-037J06, gen... 54 0.017 1
(DH481464) Monosiga ovata DNA, fosmid clone: MOF-035A21, gen... 54 0.017 1
(DH480380) Monosiga ovata DNA, fosmid clone: MOF-033C06, gen... 54 0.017 1
(DH475681) Monosiga ovata DNA, fosmid clone: MOF-024M24, gen... 54 0.017 1
(DH471948) Monosiga ovata DNA, fosmid clone: MOF-018G13, gen... 54 0.017 1
(DH435083) Macropus eugenii DNA with T7 primer, fosmid clone... 54 0.017 1
(DE237939) Trifolium pratense DNA, clone:RCG34153. 54 0.017 1
(DE237740) Trifolium pratense DNA, clone:RCG33758. 54 0.017 1
(DE236575) Trifolium pratense DNA, clone:RCG32054. 54 0.017 1
(DE236557) Trifolium pratense DNA, clone:RCG32019. 54 0.017 1
(DY663649) SC_CP_07_E09 SC_CP Senecio cambrensis cDNA 5', mR... 54 0.017 1
(DC584664) Diospyros kaki cDNA, clone: KA017_B05, 5' end, ex... 54 0.017 1
(DC494472) Monosiga ovata cDNA, clone: MOC-064H05, 3'end. 54 0.017 1
(CI997489) Marsupenaeus japonicus cDNA, clone:YAQ01A01NGRM00... 54 0.017 1
(BJ389085) Dictyostelium discoideum cDNA clone:dds17o11, 5' ... 54 0.017 1
(BJ388843) Dictyostelium discoideum cDNA clone:dds16o11, 5' ... 54 0.017 1
(BI556463) 603237209F1 NCI_CGAP_Mam3 Mus musculus cDNA clone... 54 0.017 1
(FL641488) TS05-B10 Reticulitermes flavipes symbiont library... 54 0.017 1
(EX841955) CBNC11072.rev CBNC Phycomyces blakesleeanus NRRL1... 54 0.017 1
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 48 0.021 6
(CZ289679) cp65f01.r Candida parapsilosis Random Genomic Lib... 50 0.027 2
(EJ232181) 1092404029361 Global-Ocean-Sampling_GS-27-01-01-1... 52 0.033 2
(AF024654) Dictyostelium discoideum hybrid histidine kinase ... 52 0.056 2
(BV004411) S208P6640RH3.T0 129S1/SvImJ Mus musculus STS geno... 52 0.066 1
(CT025668) Mouse DNA sequence from clone RP24-370M11 on chro... 52 0.066 1
(CT025625) Mouse DNA sequence from clone RP23-449N15 on chro... 52 0.066 1
(CT009711) Mouse DNA sequence from clone RP23-128L22 on chro... 52 0.066 1
(AL929275) Mouse DNA sequence from clone RP23-65P13 on chrom... 52 0.066 1
(AL928659) Mouse DNA sequence from clone RP23-271B13 on chro... 52 0.066 1
(AL844177) Mouse DNA sequence from clone RP23-414O19 on chro... 52 0.066 1
(AJ403606) M.musculus DNA for GFAP-binding fragment GFAPD10. 52 0.066 1
(AC161520) Mus musculus chromosome 7, clone RP24-282D19, com... 52 0.066 1
(AC160969) Mus musculus BAC clone RP24-422L17 from chromosom... 52 0.066 1
(AC156279) Mus musculus 6 BAC RP24-244D20 (Roswell Park Canc... 52 0.066 1
(AC154842) Mus musculus BAC clone RP23-55C11 from chromosome... 52 0.066 1
(AC154720) Mus musculus BAC clone RP24-371C21 from chromosom... 52 0.066 1
(AC154204) Mus musculus BAC clone RP24-393D5 from chromosome... 52 0.066 1
(AC153838) Mus musculus 6 BAC RP23-82B24 (Roswell Park Cance... 52 0.066 1
(AC153512) Mus musculus 10 BAC RP23-18K14 (Roswell Park Canc... 52 0.066 1
(AC140337) Mus musculus BAC clone RP23-238H7 from 1, complet... 52 0.066 1
(AC136018) Mus musculus BAC clone RP24-125E6 from chromosome... 52 0.066 1
(AC132435) Mus musculus BAC clone RP23-223L12 from 10, compl... 52 0.066 1
(AC130716) Mus musculus BAC clone RP23-463B12 from 3, comple... 52 0.066 1
(AC125395) Mus musculus BAC clone RP23-213J1 from chromosome... 52 0.066 1
(AC122923) Mus musculus BAC clone RP23-36G5 from 10, complet... 52 0.066 1
(AC122837) Mus musculus BAC clone RP23-189N3 from 16, comple... 52 0.066 1
(AC117192) Mus musculus BAC clone RP23-77A18 from 2, complet... 52 0.066 1
(AC115742) Mus musculus chromosome 7, clone RP23-477E13, com... 52 0.066 1
(AC114593) Mus musculus chromosome 14, clone RP23-44B17, com... 52 0.066 1
(AC110551) Mus musculus chromosome 7, clone RP23-245P16, com... 52 0.066 1
(AC107850) Mus musculus chromosome 17, clone RP23-450G2, com... 52 0.066 1
(EU328294) Schiedea adamantis microsatellite SA31 sequence. 52 0.066 1
(CR382131) Yarrowia lipolytica strain CLIB122 chromosome E c... 52 0.066 1
(BX294013) Neurospora crassa DNA linkage group V Cosmid cont... 52 0.066 1
(AY362701) Pichia pastoris aspartic protease yapsin 1 (YPS1)... 52 0.066 1
(AP008218) Oryza sativa (japonica cultivar-group) genomic DN... 52 0.066 1
(AP008211) Oryza sativa (japonica cultivar-group) genomic DN... 52 0.066 1
(AP007171) Aspergillus oryzae RIB40 genomic DNA, SC011. 52 0.066 1
(AM270285) Aspergillus niger contig An12c0290, complete genome. 52 0.066 1
(AL732376) Oryza sativa chromosome 12, . BAC OSJNBa0086B10 o... 52 0.066 1
(AC098571) Oryza sativa Japonica Group chromosome 5 clone OJ... 52 0.066 1
(EA700756) Sequence 79635 from patent US 7365185. 52 0.066 1
(EA687727) Sequence 66606 from patent US 7365185. 52 0.066 1
(AR545847) Sequence 978 from patent US 6747137. 52 0.066 1
(BX538353) Cryptosporidium parvum chromosome 6, complete seq... 52 0.066 1
(AY392443) Dictyostelium discoideum possible endotoxin gene,... 52 0.066 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 52 0.066 1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 52 0.066 1
(AB197011) Haliotis discus hannai DNA, microsatellite Hdh61. 52 0.066 1
(AC136105) Rattus norvegicus clone CH230-412E19, WORKING DRA... 52 0.066 1
(AC133799) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 52 0.066 1
(AC129398) Rattus norvegicus clone CH230-6C6, WORKING DRAFT ... 52 0.066 1
(AC128866) Rattus norvegicus clone CH230-108O23, *** SEQUENC... 52 0.066 1
(AC126652) Rattus norvegicus clone CH230-55K6, *** SEQUENCIN... 52 0.066 1
(AC125299) Rattus norvegicus clone CH230-502C11, WORKING DRA... 52 0.066 1
(AC119818) Mus musculus clone RP23-104A22, *** SEQUENCING IN... 52 0.066 1
(AC118410) Rattus norvegicus clone CH230-218N15, *** SEQUENC... 52 0.066 1
(AC112890) Rattus norvegicus clone CH230-239D19, *** SEQUENC... 52 0.066 1
(AC111350) Rattus norvegicus clone CH230-157E18, WORKING DRA... 52 0.066 1
(AC106181) Rattus norvegicus clone CH230-116O11, *** SEQUENC... 52 0.066 1
(AC103123) Rattus norvegicus clone CH230-226B23, WORKING DRA... 52 0.066 1
(AC100459) Mus musculus clone RP23-138O24, LOW-PASS SEQUENCE... 52 0.066 1
(AC099084) Rattus norvegicus clone CH230-90E9, WORKING DRAFT... 52 0.066 1
(AC097195) Rattus norvegicus clone CH230-190H11, *** SEQUENC... 52 0.066 1
(DQ273271) Asparagus officinalis clone B4-L7-94, *** SEQUENC... 52 0.066 1
(AC094252) Rattus norvegicus clone CH230-3E10, *** SEQUENCIN... 52 0.066 1
(AP003645) Mus musculus genomic DNA, chromosome 16q clone:RP... 52 0.066 1
(AL513006) Oryza sativa chromosome 12 ***SEQUENCING IN PROGR... 52 0.066 1
(AC215175) Zea mays chromosome 3 clone CH201-97G13; ZMMBBc00... 52 0.066 1
(AC214121) Zea mays chromosome 2 clone CH201-145O9; ZMMBBc01... 52 0.066 1
(AC205316) Zea mays chromosome 8 clone CH201-501O16; ZMMBBc0... 52 0.066 1
(AC202150) Zea mays chromosome 1 clone ZMMBBb-320G12; ZMMBBb... 52 0.066 1
(AC202109) Zea mays chromosome 8 clone ZMMBBb-313K3; ZMMBBb0... 52 0.066 1
(AC201609) Strongylocentrotus purpuratus clone R3-5N23, WORK... 52 0.066 1
(AC201345) Strongylocentrotus purpuratus clone R3-16P15, WOR... 52 0.066 1
(AC201183) Strongylocentrotus purpuratus clone R3-14O10, WOR... 52 0.066 1
(AC181799) Strongylocentrotus purpuratus clone R3-1027M19, W... 52 0.066 1
(AC181725) Strongylocentrotus purpuratus clone R3-1039D03, W... 52 0.066 1
(AC181523) Strongylocentrotus purpuratus clone R3-64O23, WOR... 52 0.066 1
(AC181279) Strongylocentrotus purpuratus clone R3-4015J17, W... 52 0.066 1
(AC181168) Strongylocentrotus purpuratus clone R3-16A17, WOR... 52 0.066 1
(AC181102) Strongylocentrotus purpuratus clone R3-3047K03, W... 52 0.066 1
(AC181081) Strongylocentrotus purpuratus clone R3-3048G17, W... 52 0.066 1
(AC181062) Strongylocentrotus purpuratus clone R3-3050B8, WO... 52 0.066 1
(AC181014) Strongylocentrotus purpuratus clone R3-3055G15, W... 52 0.066 1
(AC180923) Strongylocentrotus purpuratus clone R3-3063O14, W... 52 0.066 1
(AC180630) Strongylocentrotus purpuratus clone R3-3090I22, W... 52 0.066 1
(AC180587) Strongylocentrotus purpuratus clone R3-3094G12, W... 52 0.066 1
(AC179758) Strongylocentrotus purpuratus clone R3-1017K12, W... 52 0.066 1
(AC179360) Strongylocentrotus purpuratus clone R3-59G20, WOR... 52 0.066 1
(AC179357) Strongylocentrotus purpuratus clone R3-59F5, WORK... 52 0.066 1
(AC179091) Strongylocentrotus purpuratus clone R3-4010A15, W... 52 0.066 1
(AC178824) Strongylocentrotus purpuratus clone R3-29G2, WORK... 52 0.066 1
(AC178238) Strongylocentrotus purpuratus clone R3-3086D15, W... 52 0.066 1
(AC178177) Strongylocentrotus purpuratus clone R3-1116N12, W... 52 0.066 1
(AC177726) Strongylocentrotus purpuratus clone R3-1008P4, WO... 52 0.066 1
(AC177654) Strongylocentrotus purpuratus clone R3-3057A5, WO... 52 0.066 1
(AC177271) Strongylocentrotus purpuratus clone R3-43O10, WOR... 52 0.066 1
(AC177092) Strongylocentrotus purpuratus clone R3-4012F20, W... 52 0.066 1
(AC176851) Strongylocentrotus purpuratus clone R3-3120J18, W... 52 0.066 1
(AC176807) Strongylocentrotus purpuratus clone R3-3109G05, W... 52 0.066 1
(AC176776) Strongylocentrotus purpuratus clone R3-3104K2, WO... 52 0.066 1
(AC176715) Strongylocentrotus purpuratus clone R3-3095H21, W... 52 0.066 1
(AC176229) Strongylocentrotus purpuratus clone R3-3063A10, W... 52 0.066 1
(AC175949) Strongylocentrotus purpuratus clone R3-3038B20, W... 52 0.066 1
(AC174734) Strongylocentrotus purpuratus clone R3-1115F23, W... 52 0.066 1
(AC174135) Strongylocentrotus purpuratus clone R3-1004A20, W... 52 0.066 1
(AC173635) Strongylocentrotus purpuratus clone R3-3028I10, *... 52 0.066 1
(AC172308) Strongylocentrotus purpuratus clone R3-14N10, WOR... 52 0.066 1
(AC168648) Strongylocentrotus purpuratus clone R3-3017J8, WO... 52 0.066 1
(AC168547) Strongylocentrotus purpuratus clone R3-3091I15, W... 52 0.066 1
(AC168449) Strongylocentrotus purpuratus clone R3-38N3, WORK... 52 0.066 1
(AZ861188) 2M0167H01R Mouse 10kb plasmid UUGC1M library Mus ... 52 0.066 1
(AQ449579) 500002B05.x2 CpIOWAM13mp18gDNA1 Cryptosporidium p... 52 0.066 1
(FH458869) CHO_OF4929xm01r1.ab1 CHO_OF4 Nicotiana tabacum ge... 52 0.066 1
(FH348014) CHO_OF4264xc19f1.ab1 CHO_OF4 Nicotiana tabacum ge... 52 0.066 1
(FH141844) CHO_OF3711xc17r1.ab1 CHO_OF3 Nicotiana tabacum ge... 52 0.066 1
(ER280954) 1095595489514 Global-Ocean-Sampling_GS-33-01-01-1... 52 0.066 1
(ER098727) 1095521889033 Global-Ocean-Sampling_GS-33-01-01-1... 52 0.066 1
(EK849354) 1093017774638 Global-Ocean-Sampling_GS-33-01-01-1... 52 0.066 1
(EK749987) 1093017015792 Global-Ocean-Sampling_GS-33-01-01-1... 52 0.066 1
(EK646331) 1092351260866 Global-Ocean-Sampling_GS-33-01-01-1... 52 0.066 1
(EK495661) 1095505156535 Global-Ocean-Sampling_GS-32-01-01-1... 52 0.066 1
(EK480279) 1095469513030 Global-Ocean-Sampling_GS-32-01-01-1... 52 0.066 1
(EK191781) 1095460021551 Global-Ocean-Sampling_GS-31-01-01-1... 52 0.066 1
(EJ498147) 1095403590145 Global-Ocean-Sampling_GS-28-01-01-1... 52 0.066 1
(EJ338542) 1092963498076 Global-Ocean-Sampling_GS-28-01-01-1... 52 0.066 1
(EJ311527) 1095403004024 Global-Ocean-Sampling_GS-27-01-01-1... 52 0.066 1
(EJ230854) 1092402591175 Global-Ocean-Sampling_GS-27-01-01-1... 52 0.066 1
(DH504528) Monosiga ovata DNA, fosmid clone: MOF-075A17, gen... 52 0.066 1
(DH490983) Monosiga ovata DNA, fosmid clone: MOF-051F21, gen... 52 0.066 1
(DH484117) Monosiga ovata DNA, fosmid clone: MOF-039K12, gen... 52 0.066 1
(DH475704) Monosiga ovata DNA, fosmid clone: MOF-024N13, gen... 52 0.066 1
(DE951158) Macropus eugenii DNA, BAC clone: MEB1-149D11_R, 3... 52 0.066 1
(DE836957) Monosiga ovata DNA, BAC clone: MOBS-014K20_F, 5'end. 52 0.066 1
(CR242702) Reverse strand read from insert in 5'HPRT inserti... 52 0.066 1
(CL953844) OsIRUA004221 Oryza sativa Express Library Oryza s... 52 0.066 1
(AG518059) Mus musculus molossinus DNA, clone:MSMg01-424A18.... 52 0.066 1

>(BJ375034) Dictyostelium discoideum cDNA clone:ddc17n03, 3' end,
single read.
Length = 726

Score = 716 bits (361), Expect(4) = 0.0
Identities = 366/367 (99%)
Strand = Plus / Minus


Query: 785 tgcctcagtttatatgttatatattgaatgttcaattaatggacatccattaaaagcttt 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 tgcctcagtttatatgttatatattgaatgttcaattaatggacatccattaaaagcttt 667


Query: 845 tgtagatacaggtgcccaacaatntattatgtctgaaaaatgtgccgaaagatgcgaaat 904
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 666 tgtagatacaggtgcccaacaatntattatgtntgaaaaatgtgccgaaagatgcgaaat 607


Query: 905 ttcaagaattattgatactagatttcatggtattgctaaaggtgtgggtacatcaaaaat 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ttcaagaattattgatactagatttcatggtattgctaaaggtgtgggtacatcaaaaat 547


Query: 965 tataggtagagttcatagtacagacttaaaacttggcaactctttattctctgtatcatt 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tataggtagagttcatagtacagacttaaaacttggcaactctttattctctgtatcatt 487


Query: 1025 atctatccttcaaaatcaagatgttgacttcatccttggtttggatatgttaaagcgtca 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 atctatccttcaaaatcaagatgttgacttcatccttggtttggatatgttaaagcgtca 427


Query: 1085 tcaagtcattttggatttaaatagaggtgtattacaaattgcaaatgaaaagattgaatt 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tcaagtcattttggatttaaatagaggtgtattacaaattgcaaatgaaaagattgaatt 367


Query: 1145 ccttcat 1151
|||||||
Sbjct: 366 ccttcat 360

Score = 301 bits (152), Expect(4) = 0.0
Identities = 154/155 (99%)
Strand = Plus / Minus


Query: 1337 caacaacaacaacactagacctccaattaattcaccaccagttgcaaagacaccgcaacc 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 caacaacaacaacactagacctccaattaattcaccaccagttgcaaagacaccgcaacc 115


Query: 1397 aacaccacaaccaactacaaatcaatatgcttctgaatccaatatccaaacccttattgg 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 aacaccacaaccaactacaaatcaatatgcttctgaatccaatatccaaacccttattgg 55


Query: 1457 acttggttgttcaagagataaggcaattagacttt 1491
|||| ||||||||||||||||||||||||||||||
Sbjct: 54 acttngttgttcaagagataaggcaattagacttt 20

Score = 190 bits (96), Expect(4) = 0.0
Identities = 96/96 (100%)
Strand = Plus / Minus


Query: 1216 caactgctaatagtctttcaccttcaacaacttcaaccactaccactaccactaccacta 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 caactgctaatagtctttcaccttcaacaacttcaaccactaccactaccactaccacta 236


Query: 1276 cttcaccccaaactccaactaatgccacttctcctg 1311
||||||||||||||||||||||||||||||||||||
Sbjct: 235 cttcaccccaaactccaactaatgccacttctcctg 200

Score = 28.2 bits (14), Expect(4) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 1494 actcaagctaaagg 1507
||||||||||||||
Sbjct: 18 actcaagctaaagg 5

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,664,944,597
Number of extensions: 104743766
Number of successful extensions: 9696909
Number of sequences better than 10.0: 1114
Length of query: 1611
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1587
Effective length of database: 96,409,374,237
Effective search space: 153001676914119
Effective search space used: 153001676914119
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.27
Homology vs Protein
Query= Contig-U16317-1 (Contig-U16317-1Q) /CSM_Contig/Contig-U16317-1Q.Seq.d
(1611 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54JB0) RecName: Full=Protein DDI1 homolog; 356 e-173
DQ311262_1(DQ311262|pid:none) Bombyx mori DNA-damage inducible p... 152 1e-44
AK067974_1(AK067974|pid:none) Oryza sativa Japonica Group cDNA c... 139 3e-43
BT077255_1(BT077255|pid:none) Caligus rogercresseyi clone crog-e... 145 9e-42
BT076559_1(BT076559|pid:none) Caligus rogercresseyi clone crog-e... 145 1e-41
(A0JPP7) RecName: Full=Protein DDI1 homolog 1; &BC127531_1(BC12... 145 1e-40
(Q5TDH0) RecName: Full=Protein DDI1 homolog 2; &AK293006_1(AK29... 148 3e-40
(Q9DAF3) RecName: Full=Protein DDI1 homolog 1; &AK005882_1(AK00... 144 5e-40
(Q6TH22) RecName: Full=Protein DDI1 homolog 2; &AY398334_1(AY39... 149 1e-39
(Q7ZYA7) RecName: Full=Protein DDI1 homolog 2; &BC043869_1(BC04... 144 3e-39
(Q8WTU0) RecName: Full=Protein DDI1 homolog 1; &AB464506_1(AB46... 145 2e-38
(Q2T9Z1) RecName: Full=Protein DDI1 homolog 1; &BC111200_1(BC11... 143 2e-38
(Q95JI3) RecName: Full=Protein DDI1 homolog 1; &AB070198_1(AB07... 145 3e-38
BC021172_1(BC021172|pid:none) Homo sapiens DDI1, DNA-damage indu... 144 7e-38
DQ683059_1(DQ683059|pid:none) Synthetic construct DDI1 (DDI1) ge... 135 7e-37
(Q5KL78) RecName: Full=DNA damage-inducible protein 1; &AE01734... 149 2e-36
AY085083_1(AY085083|pid:none) Arabidopsis thaliana clone 12734 m... 133 3e-36
(Q6CFI3) RecName: Full=DNA damage-inducible protein 1; &CR38212... 145 4e-36
AM910995_387(AM910995|pid:none) Plasmodium knowlesi strain H chr... 152 3e-35
(Q10255) RecName: Full=Uncharacterized protein C56F8.07; 151 6e-35
AP007151_401(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 147 2e-34
(Q2USD7) RecName: Full=DNA damage-inducible protein 1; 147 2e-34
(Q4WGS4) RecName: Full=DNA damage-inducible protein 1; 147 4e-34
(A1DCU5) RecName: Full=DNA damage-inducible protein 1; 147 4e-34
(A1CDT9) RecName: Full=DNA damage-inducible protein 1; 145 1e-33
CP001323_948(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 142 1e-33
(Q7S906) RecName: Full=DNA damage-inducible protein 1; 139 7e-33
CR940348_825(CR940348|pid:none) Theileria annulata strain Ankara... 117 2e-32
EF146805_1(EF146805|pid:none) Populus trichocarpa clone WS01214_... 141 8e-32
HB446740_1(HB446740|pid:none) Sequence 163 from Patent EP2078753. 139 4e-31
T02845(A81462;T02845)DNA-damage inducible protein homolog DDI1 [... 127 5e-31
AE001274_62(AE001274|pid:none) Leishmania major strain Friedlin ... 127 5e-31
(Q6FQE9) RecName: Full=DNA damage-inducible protein 1; &CR38095... 137 1e-30
(Q6CNS3) RecName: Full=DNA damage-inducible protein 1; &CR38212... 135 2e-30
AB024034_5(AB024034|pid:none) Arabidopsis thaliana genomic DNA, ... 135 3e-30
CR954202_542(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 129 4e-30
CP000582_57(CP000582|pid:none) Ostreococcus lucimarinus CCE9901 ... 134 5e-30
EF678606_1(EF678606|pid:none) Picea sitchensis clone WS02929_F19... 135 6e-30
AM440023_2(AM440023|pid:none) Vitis vinifera contig VV78X184339.... 131 8e-29
CU928180_330(CU928180|pid:none) Kluyveromyces thermotolerans str... 129 2e-28
BC097361_1(BC097361|pid:none) Rattus norvegicus DNA-damage induc... 105 7e-28
(P40087) RecName: Full=DNA damage-inducible protein 1; AltName: ... 126 2e-27
(Q6BK42) RecName: Full=DNA damage-inducible protein 1; &CR38213... 123 2e-26
FN317395_1(FN317395|pid:none) Schistosoma japonicum isolate Anhu... 122 5e-26
A88711(A88711)protein C01G5.6 [imported] - Caenorhabditis elegans 112 4e-23
T30993(T30993) hypothetical protein C01G5.6 - Caenorhabditis ele... 112 4e-23
FN357484_19(FN357484|pid:none) Schistosoma mansoni genome sequen... 93 3e-17
AY811395_1(AY811395|pid:none) Schistosoma japonicum SJCHGC02411 ... 72 4e-11
AC137610_10(AC137610|pid:none) Oryza sativa (japonica cultivar-g... 49 5e-04
BC148102_1(BC148102|pid:none) Bos taurus nuclear receptor intera... 49 5e-04
AC121365_11(AC121365|pid:none) Oryza sativa (japonica cultivar-g... 49 5e-04
AC145367_1(AC145367|pid:none) Oryza sativa (japonica cultivar-gr... 49 7e-04
AC116603_15(AC116603|pid:none) Oryza sativa (japonica cultivar-g... 48 0.001
CP000927_2752(CP000927|pid:none) Caulobacter sp. K31, complete g... 48 0.001
AL731602_5(AL731602|pid:none) Oryza sativa genomic DNA, chromoso... 48 0.001
AC120534_21(AC120534|pid:none) Oryza sativa (japonica cultivar-g... 47 0.002
AL662955_10(AL662955|pid:none) Oryza sativa genomic DNA, chromos... 47 0.002
AC078839_1(AC078839|pid:none) Oryza sativa (japonica cultivar-gr... 47 0.002
AC146526_12(AC146526|pid:none) Oryza sativa (japonica cultivar-g... 47 0.002
CR855110_9(CR855110|pid:none) Oryza sativa genomic DNA, chromoso... 47 0.003
AL662944_10(AL662944|pid:none) Oryza sativa genomic DNA, chromos... 47 0.003
AC077693_20(AC077693|pid:none) Oryza sativa chromosome 10 BAC OS... 47 0.003
AP008207_1465(AP008207|pid:none) Oryza sativa (japonica cultivar... 47 0.003
AC124142_14(AC124142|pid:none) Oryza sativa (japonica cultivar-g... 47 0.003
AC120985_4(AC120985|pid:none) Oryza sativa (japonica cultivar-gr... 47 0.003
AL606690_14(AL606690|pid:none) Oryza sativa genomic DNA, chromos... 47 0.003
AC130611_13(AC130611|pid:none) Oryza sativa (japonica cultivar-g... 47 0.003
AC120534_22(AC120534|pid:none) Oryza sativa (japonica cultivar-g... 47 0.003
AC091749_5(AC091749|pid:none) Oryza sativa chromosome 10 BAC OSJ... 47 0.003
AC093017_8(AC093017|pid:none) Oryza sativa (japonica cultivar-gr... 47 0.003
AC129718_16(AC129718|pid:none) Oryza sativa (japonica cultivar-g... 47 0.003
AC135503_5(AC135503|pid:none) Oryza sativa (japonica cultivar-gr... 46 0.003
AC137616_13(AC137616|pid:none) Oryza sativa (japonica cultivar-g... 46 0.004
CR855068_4(CR855068|pid:none) Oryza sativa genomic DNA, chromoso... 46 0.004
AL442118_12(AL442118|pid:none) Oryza sativa genomic DNA, chromos... 46 0.004
BT058466_1(BT058466|pid:none) Salmo salar clone Contig1073 UV ex... 46 0.004
(Q9JJR9) RecName: Full=Nuclear receptor-interacting protein 3; ... 45 0.006
AK083130_1(AK083130|pid:none) Mus musculus adult male hippocampu... 45 0.006
AC135916_2(AC135916|pid:none) Genomic sequence for Oryza sativa,... 45 0.006
AC098566_16(AC098566|pid:none) Oryza sativa chromosome 10 clone ... 45 0.008
AX405761_1(AX405761|pid:none) Sequence 176 from Patent WO0222660. 45 0.008
FN373927_1(FN373927|pid:none) Schistosoma mansoni genome sequenc... 45 0.008
AY211930_1(AY211930|pid:none) Homo sapiens sarcoma antigen NY-SA... 45 0.008
AC137921_2(AC137921|pid:none) Oryza sativa chromosome 3 BAC OSJN... 45 0.008
(Q9NQ35) RecName: Full=Nuclear receptor-interacting protein 3; A... 45 0.008
AC137610_4(AC137610|pid:none) Oryza sativa (japonica cultivar-gr... 45 0.010
AK098063_1(AK098063|pid:none) Homo sapiens cDNA FLJ40744 fis, cl... 44 0.013
AL606997_6(AL606997|pid:none) Oryza sativa genomic DNA, chromoso... 44 0.017
AL663004_6(AL663004|pid:none) Oryza sativa genomic DNA, chromoso... 44 0.017
AC137610_18(AC137610|pid:none) Oryza sativa (japonica cultivar-g... 44 0.017
AC135558_10(AC135558|pid:none) Oryza sativa (japonica cultivar-g... 44 0.022
AM432176_2(AM432176|pid:none) Vitis vinifera contig VV78X039936.... 44 0.022
CR855217_8(CR855217|pid:none) Oryza sativa (indica cultivar-grou... 43 0.029
AC132489_6(AC132489|pid:none) Oryza sativa (japonica cultivar-gr... 43 0.029
AJ278170_1(AJ278170|pid:none) Mus musculus mRNA for neuronal int... 43 0.029
AL662958_8(AL662958|pid:none) Oryza sativa genomic DNA, chromoso... 43 0.029
BC055645_1(BC055645|pid:none) Danio rerio neural precursor cell ... 43 0.029
BT073010_1(BT073010|pid:none) Oncorhynchus mykiss clone omyk-evn... 43 0.029
BC078600_1(BC078600|pid:none) Xenopus laevis hypothetical protei... 43 0.029
BT075193_1(BT075193|pid:none) Osmerus mordax clone omor-eva-507-... 43 0.029
BC076245_1(BC076245|pid:none) Danio rerio neural precursor cell ... 43 0.029
BT083291_1(BT083291|pid:none) Anoplopoma fimbria clone afim-evh-... 43 0.029
(Q5R7G1) RecName: Full=Nuclear receptor-interacting protein 3; ... 43 0.038
AM474226_1(AM474226|pid:none) Vitis vinifera contig VV78X054870.... 42 0.049
BC084363_1(BC084363|pid:none) Xenopus laevis hypothetical LOC495... 42 0.049
AB458444_100(AB458444|pid:none) Oryza sativa Indica Group Kasala... 42 0.049
AC133861_9(AC133861|pid:none) Oryza sativa chromosome 3 BAC OSJN... 42 0.049
EF103394_1(EF103394|pid:none) Haliotis discus discus ubiquitin-l... 42 0.050
CR855075_6(CR855075|pid:none) Oryza sativa (indica cultivar-grou... 42 0.065
AC119149_15(AC119149|pid:none) Oryza sativa (japonica cultivar-g... 42 0.065
AM455468_2(AM455468|pid:none) Vitis vinifera contig VV78X156887.... 42 0.065
AK300944_1(AK300944|pid:none) Homo sapiens cDNA FLJ54174 complet... 42 0.065
CR855080_5(CR855080|pid:none) Oryza sativa (indica cultivar-grou... 42 0.065
AC051624_1(AC051624|pid:none) Genomic Sequence for Oryza sativa,... 42 0.065
(P61282) RecName: Full=NEDD8; AltName: Full=Ubiquitin-like prote... 42 0.065
CP000595_60(CP000595|pid:none) Ostreococcus lucimarinus CCE9901 ... 42 0.065
AL662962_13(AL662962|pid:none) Oryza sativa genomic DNA, chromos... 42 0.084
CR855225_5(CR855225|pid:none) Oryza sativa genomic DNA, chromoso... 42 0.084
DQ985390_2(DQ985390|pid:none) Philodina roseola retrotransposon ... 42 0.084
BT071719_1(BT071719|pid:none) Picea sitchensis clone WS0442_N10 ... 42 0.084
AM446694_2(AM446694|pid:none) Vitis vinifera contig VV78X219773.... 41 0.11
AC145272_6(AC145272|pid:none) Oryza sativa (japonica cultivar-gr... 41 0.11
AE017321_186(AE017321|pid:none) Wolbachia endosymbiont strain TR... 41 0.11
AC112208_29(AC112208|pid:none) Oryza sativa (japonica cultivar-g... 41 0.11
AF119040_1(AF119040|pid:none) Lycopersicon esculentum haplotype ... 41 0.11
CR855040_5(CR855040|pid:none) Oryza sativa genomic DNA, chromoso... 41 0.11
EF146368_1(EF146368|pid:none) Populus trichocarpa clone WS0117_J... 41 0.11
EF146180_1(EF146180|pid:none) Populus trichocarpa clone WS0116_A... 41 0.11
AF240445_1(AF240445|pid:none) Populus tremula x Populus tremuloi... 41 0.11
CP000304_831(CP000304|pid:none) Pseudomonas stutzeri A1501, comp... 41 0.14
AL606639_2(AL606639|pid:none) Oryza sativa genomic DNA, chromoso... 41 0.14
CR855062_2(CR855062|pid:none) Oryza sativa genomic DNA, chromoso... 41 0.14
CR855079_4(CR855079|pid:none) Oryza sativa genomic DNA, chromoso... 41 0.14
(Q9VJ33) RecName: Full=NEDD8; AltName: Full=Ubiquitin-like prote... 41 0.14
AL844508_220(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 41 0.14
AB458444_60(AB458444|pid:none) Oryza sativa Indica Group Kasalat... 40 0.19
AM480643_2(AM480643|pid:none) Vitis vinifera contig VV78X109046.... 40 0.19
AC134044_16(AC134044|pid:none) Oryza sativa (japonica cultivar-g... 40 0.19
DQ453964_2(DQ453964|pid:none) Oryza sativa (indica cultivar-grou... 40 0.19
CR855040_3(CR855040|pid:none) Oryza sativa genomic DNA, chromoso... 40 0.19
AL607007_12(AL607007|pid:none) Oryza sativa genomic DNA, chromos... 40 0.19
AC147811_20(AC147811|pid:none) Oryza sativa (japonica cultivar-g... 40 0.19
CR855060_5(CR855060|pid:none) Oryza sativa genomic DNA, chromoso... 40 0.19
AM440872_1(AM440872|pid:none) Vitis vinifera contig VV78X172680.... 40 0.19
(Q9SHE7) RecName: Full=NEDD8-like protein RUB1; AltName: Full=Ub... 40 0.19
AK158993_1(AK158993|pid:none) Mus musculus visual cortex cDNA, R... 40 0.19
CP001328_432(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 40 0.19
AE017342_100(AE017342|pid:none) Cryptococcus neoformans var. neo... 40 0.19
(Q8RUC6) RecName: Full=NEDD8-like protein RUB2; AltName: Full=Ub... 40 0.19
EZ000229_1(EZ000229|pid:none) TSA: Amblyomma americanum Contig11... 40 0.19
EF676128_1(EF676128|pid:none) Picea sitchensis clone WS02711_O04... 40 0.19
(Q54XV3) RecName: Full=NEDD8; AltName: Full=Ubiquitin-like prote... 40 0.19
CP000248_2617(CP000248|pid:none) Novosphingobium aromaticivorans... 40 0.25
AC150788_10(AC150788|pid:none) Oryza sativa (japonica cultivar-g... 40 0.25
T31657(T31657) reverse transcriptase homolog - sea squirt (Ciona... 40 0.25
AC051624_18(AC051624|pid:none) Genomic Sequence for Oryza sativa... 40 0.25
AL662968_12(AL662968|pid:none) Oryza sativa genomic DNA, chromos... 40 0.25
AC090486_5(AC090486|pid:none) Genomic sequence for Oryza sativa... 40 0.25
AM458366_3(AM458366|pid:none) Vitis vinifera contig VV79X002921.... 40 0.25
AC150788_9(AC150788|pid:none) Oryza sativa (japonica cultivar-gr... 40 0.25
BT057674_1(BT057674|pid:none) Salmo salar clone ssal-eve-509-195... 40 0.25
(P0C073) RecName: Full=NEDD8-like protein RUB1; AltName: Full=Da... 40 0.25
(O74803) RecName: Full=UV excision repair protein rhp23; AltName... 40 0.25
EF144403_1(EF144403|pid:none) Populus trichocarpa clone PX0019_E... 40 0.25
AM436113_5(AM436113|pid:none) Vitis vinifera contig VV78X033734.... 40 0.32
CR855153_2(CR855153|pid:none) Oryza sativa genomic DNA, chromoso... 40 0.32
CR855207_3(CR855207|pid:none) Oryza sativa genomic DNA, chromoso... 40 0.32
AL731581_16(AL731581|pid:none) Oryza sativa genomic DNA, chromos... 40 0.32
AC119149_12(AC119149|pid:none) Oryza sativa (japonica cultivar-g... 40 0.32
AC146338_9(AC146338|pid:none) Oryza sativa (japonica cultivar-gr... 40 0.32
BC108357_1(BC108357|pid:none) Mus musculus aspartic peptidase, r... 40 0.32
AC146522_22(AC146522|pid:none) Oryza sativa (japonica cultivar-g... 40 0.32
BT057581_1(BT057581|pid:none) Salmo salar clone ssal-eve-566-274... 40 0.32
AC084218_12(AC084218|pid:none) Oryza sativa (japonica cultivar-g... 39 0.42
AC148235_24(AC148235|pid:none) Oryza sativa (japonica cultivar-g... 39 0.42
AL606597_14(AL606597|pid:none) Oryza sativa genomic DNA, chromos... 39 0.42
AY360390_15(AY360390|pid:none) Oryza sativa (japonica cultivar-g... 39 0.42
AF061282_20(AF061282|pid:none) Sorghum bicolor 22 kDa kafirin cl... 39 0.42
AC074282_11(AC074282|pid:none) Oryza sativa (japonica cultivar-g... 39 0.42
AL662941_9(AL662941|pid:none) Oryza sativa genomic DNA, chromoso... 39 0.42
AK340368_1(AK340368|pid:none) Acyrthosiphon pisum ACYPI000077 mR... 39 0.42
AF270937_43(AF270937|pid:none) Plutella xylostella granulovirus ... 39 0.42
AC131375_23(AC131375|pid:none) Oryza sativa (japonica cultivar-g... 39 0.55
CR855237_6(CR855237|pid:none) Oryza sativa genomic DNA, chromoso... 39 0.55
AL731603_8(AL731603|pid:none) Oryza sativa genomic DNA, chromoso... 39 0.55
AC090488_7(AC090488|pid:none) Genomic sequence for Oryza sativa,... 39 0.55
AC137606_15(AC137606|pid:none) Oryza sativa (japonica cultivar-g... 39 0.55
AY360386_11(AY360386|pid:none) Oryza sativa (japonica cultivar-g... 39 0.55
BC079526_1(BC079526|pid:none) Danio rerio RAD23 homolog A (S. ce... 39 0.55
AL662955_6(AL662955|pid:none) Oryza sativa genomic DNA, chromoso... 39 0.71
AF051915_2(AF051915|pid:none) Cladosporium fulvum CfT-1 LTR-retr... 39 0.71
DQ365821_2(DQ365821|pid:none) Oryza australiensis transposon Ty3... 39 0.71
CR855237_3(CR855237|pid:none) Oryza sativa genomic DNA, chromoso... 39 0.71
AC137613_6(AC137613|pid:none) Oryza sativa (japonica cultivar-gr... 39 0.71
CR855060_3(CR855060|pid:none) Oryza sativa genomic DNA, chromoso... 39 0.71
AB463210_1(AB463210|pid:none) Synthetic construct DNA, clone: pF... 39 0.71
BC088364_1(BC088364|pid:none) Homo sapiens RAD23 homolog A (S. c... 39 0.71
BT079161_1(BT079161|pid:none) Esox lucius clone eluc-evq-527-095... 39 0.71
AK289908_1(AK289908|pid:none) Homo sapiens cDNA FLJ78534 complet... 39 0.71
M30305_1(M30305|pid:none) A.californica nuclear polyhedrosis vir... 39 0.71
(A3KMV2) RecName: Full=UV excision repair protein RAD23 homolog ... 39 0.71
CR855080_1(CR855080|pid:none) Oryza sativa (indica cultivar-grou... 38 0.93
AM118080_117(AM118080|pid:none) Ustilago hordei mating type regi... 38 0.93
(Q09PK2) RecName: Full=Retroviral-like aspartic protease 1; ... 38 0.93
CR855080_6(CR855080|pid:none) Oryza sativa (indica cultivar-grou... 38 0.93
BC057938_1(BC057938|pid:none) Mus musculus aspartic peptidase, r... 38 0.93
CR855028_5(CR855028|pid:none) Oryza sativa genomic DNA, chromoso... 38 0.93
CR855056_5(CR855056|pid:none) Oryza sativa genomic DNA, chromoso... 38 0.93
AC083944_15(AC083944|pid:none) Genomic sequence for Oryza sativa... 38 0.93
AM487002_1(AM487002|pid:none) Vitis vinifera contig VV78X106005.... 38 0.93
AC136519_7(AC136519|pid:none) Oryza sativa (japonica cultivar-gr... 38 0.93
AB458444_61(AB458444|pid:none) Oryza sativa Indica Group Kasalat... 38 0.93
AL606449_8(AL606449|pid:none) Oryza sativa genomic DNA, chromoso... 38 0.93
AC135498_4(AC135498|pid:none) Oryza sativa (japonica cultivar-gr... 38 0.93
BC119099_1(BC119099|pid:none) Mus musculus aspartic peptidase, r... 38 0.93
CR855075_1(CR855075|pid:none) Oryza sativa (indica cultivar-grou... 38 0.93
AY815100_1(AY815100|pid:none) Schistosoma japonicum SJCHGC07073 ... 38 0.93
AY812063_1(AY812063|pid:none) Schistosoma japonicum SJCHGC06167 ... 38 0.93
BX000688_2(BX000688|pid:none) Human DNA sequence from clone DAQB... 38 0.93
BC042362_1(BC042362|pid:none) Homo sapiens ribosomal protein S27... 38 0.93
(Q93725) RecName: Full=NEDD8; AltName: Full=Ubiquitin-like prote... 38 0.93
AK311914_1(AK311914|pid:none) Homo sapiens cDNA, FLJ92181, highl... 38 0.93
M96687_1(M96687|pid:none) Bovine viral diarrhea virus strain Osl... 38 0.93
(O15205) RecName: Full=Ubiquitin D; AltName: Full=Ubiquitin-like... 38 0.93
AJ411799_1(AJ411799|pid:none) Cicer arietinum Ty3-gypsy like Ret... 38 1.2
AM441521_3(AM441521|pid:none) Vitis vinifera contig VV78X172410.... 38 1.2
BX842604_3(BX842604|pid:none) Oryza sativa genomic DNA, chromoso... 38 1.2
AC119149_3(AC119149|pid:none) Oryza sativa (japonica cultivar-gr... 38 1.2
CR855045_2(CR855045|pid:none) Oryza sativa (indica cultivar-grou... 38 1.2
AC097446_22(AC097446|pid:none) Oryza sativa (japonica cultivar-g... 38 1.2
AM443272_1(AM443272|pid:none) Vitis vinifera contig VV78X148061.... 38 1.2
AL731578_9(AL731578|pid:none) Oryza sativa genomic DNA, chromoso... 38 1.2
AC021892_34(AC021892|pid:none) Genomic sequence for Oryza sativa... 38 1.2
AL663009_10(AL663009|pid:none) Oryza sativa genomic DNA, chromos... 38 1.2
FN315483_1(FN315483|pid:none) Schistosoma japonicum isolate Anhu... 38 1.2
AC146749_3(AC146749|pid:none) Medicago truncatula clone mth2-145... 37 1.6
AC137609_15(AC137609|pid:none) Oryza sativa (japonica cultivar-g... 37 1.6
AM477152_5(AM477152|pid:none) Vitis vinifera contig VV78X232800.... 37 1.6
AC133004_15(AC133004|pid:none) Oryza sativa (japonica cultivar-g... 37 1.6
CR855017_1(CR855017|pid:none) Oryza sativa (indica cultivar-grou... 37 1.6
CR854995_1(CR854995|pid:none) Oryza sativa (indica cultivar-grou... 37 1.6
AL662941_10(AL662941|pid:none) Oryza sativa genomic DNA, chromos... 37 1.6
AC078944_15(AC078944|pid:none) Genomic Sequence for Oryza sativa... 37 1.6
AC091749_12(AC091749|pid:none) Oryza sativa chromosome 10 BAC OS... 37 1.6
AM488515_2(AM488515|pid:none) Vitis vinifera contig VV78X044222.... 37 1.6
AC007789_10(AC007789|pid:none) Oryza sativa BAC OSJNBa0049B20 ge... 37 1.6
AC137003_9(AC137003|pid:none) Oryza sativa (japonica cultivar-gr... 37 1.6
CP000473_5844(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 37 1.6
CR855232_10(CR855232|pid:none) Oryza sativa genomic DNA, chromos... 37 1.6
AL662937_15(AL662937|pid:none) Oryza sativa genomic DNA, chromos... 37 1.6
AM494962_174(AM494962|pid:none) Leishmania braziliensis chromoso... 37 1.6
AK010034_1(AK010034|pid:none) Mus musculus adult male tongue cDN... 37 1.6
AM270103_20(AM270103|pid:none) Aspergillus niger contig An05c003... 37 1.6
AM920428_461(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 37 1.6
BC034361_1(BC034361|pid:none) Mus musculus 2'-5' oligoadenylate ... 37 1.6
AK150080_1(AK150080|pid:none) Mus musculus bone marrow macrophag... 37 1.6
AY926456_1(AY926456|pid:none) Salmo salar ISG15-like protein mRN... 37 1.6
BC163585_1(BC163585|pid:none) Danio rerio si:dkey-245f7.1, mRNA ... 37 2.1
AB458444_104(AB458444|pid:none) Oryza sativa Indica Group Kasala... 37 2.1
AB458444_6(AB458444|pid:none) Oryza sativa Indica Group Kasalath... 37 2.1
AC093568_17(AC093568|pid:none) Oryza sativa chromosome 10 clone ... 37 2.1
AL662980_14(AL662980|pid:none) Oryza sativa genomic DNA, chromos... 37 2.1
U89994_2(U89994|pid:none) Drosophila melanogaster burdock retrot... 37 2.1
S52563(S52563) hypothetical protein 1 (clone Db314) - fruit fly ... 37 2.1
EU574818_1(EU574818|pid:none) Ornithodoros coriaceus clone OC-23... 37 2.1
U82163_1(U82163|pid:none) Oryctolagus cuniculus oncogene rsc mRN... 37 2.1
DQ278173_1(DQ278173|pid:none) Theileria lestoquardi clone 34 unk... 37 2.1
AC097446_24(AC097446|pid:none) Oryza sativa (japonica cultivar-g... 37 2.7
AL731643_26(AL731643|pid:none) Oryza sativa genomic DNA, chromos... 37 2.7
AJ133521_2(AJ133521|pid:none) Drosophila buzzatii osvaldo retrot... 37 2.7
AC091732_12(AC091732|pid:none) Oryza sativa (japonica cultivar-g... 37 2.7
AL731618_12(AL731618|pid:none) Oryza sativa genomic DNA, chromos... 37 2.7
AL731602_11(AL731602|pid:none) Oryza sativa genomic DNA, chromos... 37 2.7
CR855060_2(CR855060|pid:none) Oryza sativa genomic DNA, chromoso... 37 2.7
AM456427_1(AM456427|pid:none) Vitis vinifera contig VV78X263171.... 37 2.7
AC080019_15(AC080019|pid:none) Genomic sequence for Oryza sativa... 37 2.7
A96580(A96580) hypothetical protein F15I1.4 [imported] - Arabido... 37 2.7
AY915733_1(AY915733|pid:none) Schistosoma japonicum SJCHGC09474 ... 37 2.7
AY360386_3(AY360386|pid:none) Oryza sativa (japonica cultivar-gr... 36 3.5
AM481702_1(AM481702|pid:none) Vitis vinifera contig VV78X263458.... 36 3.5
AL606667_18(AL606667|pid:none) Oryza sativa genomic DNA, chromos... 36 3.5
CR855077_3(CR855077|pid:none) Oryza sativa (indica cultivar-grou... 36 3.5
AL442108_7(AL442108|pid:none) Oryza sativa genomic DNA, chromoso... 36 3.5
AL731595_9(AL731595|pid:none) Oryza sativa genomic DNA, chromoso... 36 3.5
AL731594_11(AL731594|pid:none) Oryza sativa genomic DNA, chromos... 36 3.5
AC148235_11(AC148235|pid:none) Oryza sativa (japonica cultivar-g... 36 3.5
AC119290_7(AC119290|pid:none) Oryza sativa (japonica cultivar-gr... 36 3.5
AL662951_12(AL662951|pid:none) Oryza sativa genomic DNA, chromos... 36 3.5
CR954216_73(CR954216|pid:none) Ostreococcus tauri strain OTTH059... 36 3.5
AE014185_112(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 36 3.5
AF162221_52(AF162221|pid:none) Xestia c-nigrum granulovirus geno... 36 3.5
U27577_1(U27577|pid:none) Trichomonas vaginalis polyubiquitin (U... 36 3.5
EU255577_47(EU255577|pid:none) Helicoverpa armigera granulovirus... 36 3.5
U03707_1(U03707|pid:none) Quinqueloculina seminulum ubiquitin ge... 36 3.5
BT042567_1(BT042567|pid:none) Zea mays full-length cDNA clone ZM... 36 3.5
AF069442_15(AF069442|pid:none) Arabidopsis thaliana BAC T4I9, ch... 36 3.5
BT049221_1(BT049221|pid:none) Salmo salar clone ssal-eve-547-290... 36 3.5
AY229987_51(AY229987|pid:none) Cryptophlebia leucotreta granulov... 36 3.5
AC145810_7(AC145810|pid:none) Oryza sativa (japonica cultivar-gr... 36 4.6
AC097278_23(AC097278|pid:none) Oryza sativa chromosome 10 BAC OS... 36 4.6
CR855053_6(CR855053|pid:none) Oryza sativa genomic DNA, chromoso... 36 4.6
AC148235_32(AC148235|pid:none) Oryza sativa (japonica cultivar-g... 36 4.6
AF362957_1(AF362957|pid:none) Aspergillus flavus genomic probe p... 36 4.6
AL731643_28(AL731643|pid:none) Oryza sativa genomic DNA, chromos... 36 4.6
CP000362_2892(CP000362|pid:none) Roseobacter denitrificans OCh 1... 36 4.6
AC097446_1(AC097446|pid:none) Oryza sativa (japonica cultivar-gr... 36 4.6
AC131966_15(AC131966|pid:none) Oryza sativa (japonica cultivar-g... 36 4.6
AL663011_12(AL663011|pid:none) Oryza sativa genomic DNA, chromos... 36 4.6
AC150190_4(AC150190|pid:none) Oryza sativa (japonica cultivar-gr... 36 4.6
AL606691_17(AL606691|pid:none) Oryza sativa genomic DNA, chromos... 36 4.6
DQ985395_2(DQ985395|pid:none) Adineta vaga retrotransposon Juno1... 36 4.6
(Q9TU72) RecName: Full=Xenotropic and polytropic retrovirus rece... 36 4.6
AL606449_4(AL606449|pid:none) Oryza sativa genomic DNA, chromoso... 36 4.6
EU125031_1(EU125031|pid:none) Eurythoe complanata ribosomal prot... 36 4.6
BC049473_1(BC049473|pid:none) Danio rerio zgc:172187, mRNA (cDNA... 36 4.6
AM087935_1(AM087935|pid:none) Chorocaris chacei mitochondrial pa... 36 4.6
(P48510) RecName: Full=Ubiquitin domain-containing protein DSK2;... 36 4.6
AE014188_117(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 36 4.6
BC093445_1(BC093445|pid:none) Homo sapiens ubiquitin C, mRNA (cD... 36 4.6
DQ216234_1(DQ216234|pid:none) Taeniopygia guttata clone 0058P001... 36 4.6
AF285161_1(AF285161|pid:none) Mus musculus cell-line C3H/He poly... 36 4.6
BC080583_1(BC080583|pid:none) Homo sapiens cDNA clone IMAGE:2822... 36 4.6
AM087934_1(AM087934|pid:none) Chorocaris chacei mitochondrial pa... 36 4.6
AM087928_1(AM087928|pid:none) Nereis diversicolor mitochondrial ... 36 4.6
AK127995_1(AK127995|pid:none) Homo sapiens cDNA FLJ46113 fis, cl... 36 4.6
AY318871_96(AY318871|pid:none) Canarypox virus strain ATCC VR-11... 36 4.6
AF188158_1(AF188158|pid:none) Oxytricha trifallax ubiquitin gene... 36 4.6
AB044079_1(AB044079|pid:none) Aspergillus oryzae opsA mRNA for s... 35 6.0
AL133058_1(AL133058|pid:none) Homo sapiens mRNA; cDNA DKFZp434K0... 35 6.0
AP007150_126(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 35 6.0
AL731604_12(AL731604|pid:none) Oryza sativa genomic DNA, chromos... 35 6.0
CR858618_1(CR858618|pid:none) Pongo abelii mRNA; cDNA DKFZp469O0... 35 6.0
AL662949_3(AL662949|pid:none) Oryza sativa genomic DNA, chromoso... 35 6.0
AC021892_20(AC021892|pid:none) Genomic sequence for Oryza sativa... 35 6.0
AL162431_2(AL162431|pid:none) Human DNA sequence from clone RP11... 35 6.0
DQ444465_1(DQ444465|pid:none) Nosema bombycis retrotransposon Nb... 35 6.0
AL662980_12(AL662980|pid:none) Oryza sativa genomic DNA, chromos... 35 6.0
CR858181_1(CR858181|pid:none) Pongo abelii mRNA; cDNA DKFZp469I0... 35 6.0
AC104712_4(AC104712|pid:none) Oryza sativa (japonica cultivar-gr... 35 6.0
AY661558_1(AY661558|pid:none) Hordeum vulgare subsp. vulgare eIF... 35 6.0
FN315480_1(FN315480|pid:none) Schistosoma japonicum isolate Anhu... 35 6.1
AB021974_1(AB021974|pid:none) Bombyx mori UBI3 mRNA for polyubiq... 35 6.1
FN316690_1(FN316690|pid:none) Schistosoma japonicum isolate Anhu... 35 6.1
FJ438516_1(FJ438516|pid:none) Epinephelus coioides ubiquitin C v... 35 6.1
AJ965259_1(AJ965259|pid:none) Dasytricha ruminantium partial mRN... 35 6.1
BC168051_1(BC168051|pid:none) Xenopus tropicalis cDNA clone MGC:... 35 6.1
AK010964_1(AK010964|pid:none) Mus musculus 13 days embryo liver ... 35 6.1
AY552058_1(AY552058|pid:none) Aedes aegypti ribosomal protein S2... 35 6.1
S11248(S11248)ubiquitin / ribosomal protein CEP52 - mouse (fragm... 35 6.1
BC127395_1(BC127395|pid:none) Danio rerio zgc:153686, mRNA (cDNA... 35 6.1
AF539999_151(AF539999|pid:none) Mamestra configurata nucleopolyh... 35 6.1
M22214_1(M22214|pid:none) Synthetic human ubiquitin gene (Phe4- ... 35 6.1
AF395864_1(AF395864|pid:none) Branchiostoma belcheri ubiquitin m... 35 6.1
AY752852_1(AY752852|pid:none) Culicoides sonorensis clone CsUB1 ... 35 6.1
AB003730_1(AB003730|pid:none) Homo sapiens gene for polyubiquiti... 35 6.1
AB170649_1(AB170649|pid:none) Macaca fascicularis brain cDNA clo... 35 6.1
AF506022_1(AF506022|pid:none) Tribolium castaneum isolate pCPUb ... 35 6.1
FN315482_1(FN315482|pid:none) Schistosoma japonicum isolate Anhu... 35 6.1
EU433567_1(EU433567|pid:none) Monochamus alternatus ubiquitin mR... 35 6.1
DQ363465_1(DQ363465|pid:none) Ictalurus punctatus clone C153BB02... 35 6.1
FN323957_1(FN323957|pid:none) Schistosoma japonicum isolate Anhu... 35 6.1
BC045004_1(BC045004|pid:none) Xenopus laevis similar to ubiquiti... 35 6.1
AY118702_1(AY118702|pid:none) Drosophila melanogaster AT20865 fu... 35 6.1
FN315486_1(FN315486|pid:none) Schistosoma japonicum isolate Anhu... 35 6.1
BT078470_1(BT078470|pid:none) Lepeophtheirus salmonis Pacific fo... 35 6.1
AB036060_1(AB036060|pid:none) Oncorhynchus mykiss mRNA for ubiqu... 35 6.1
AF517848_1(AF517848|pid:none) Griffithsia japonica isolate Gj526... 35 6.1
AK300882_1(AK300882|pid:none) Homo sapiens cDNA FLJ51326 complet... 35 6.1
AF322415_1(AF322415|pid:none) Synthetic construct HPV type 6b hu... 35 6.1
BC006680_1(BC006680|pid:none) Mus musculus ubiquitin C, mRNA (cD... 35 6.1
FN316698_1(FN316698|pid:none) Schistosoma japonicum isolate Anhu... 35 6.1
FN316688_1(FN316688|pid:none) Schistosoma japonicum isolate Anhu... 35 6.1
AF104020_1(AF104020|pid:none) Bovine viral diarrhea virus-2 subg... 35 6.1
AM040013_1(AM040013|pid:none) Curculio glandium partial mRNA for... 35 6.1
BT057945_1(BT057945|pid:none) Salmo salar clone ssal-rgf-504-035... 35 6.1
AJ965268_1(AJ965268|pid:none) Eudiplodinium maggii partial mRNA ... 35 6.1
BT058181_1(BT058181|pid:none) Salmo salar clone Contig1385 Ubiqu... 35 6.1
AY819759_1(AY819759|pid:none) Homo sapiens ubiquitin C splice va... 35 6.1
BC021837_1(BC021837|pid:none) Mus musculus ubiquitin C, mRNA (cD... 35 6.1
AB032025_1(AB032025|pid:none) Canis lupus familiaris mRNA for ub... 35 6.1
AF321441_1(AF321441|pid:none) Galleria mellonella polyubiquitin ... 35 6.1
AB122067_1(AB122067|pid:none) Crassostrea gigas mRNA for polyubi... 35 6.1
AE014134_1952(AE014134|pid:none) Drosophila melanogaster chromos... 35 6.1
BT043890_1(BT043890|pid:none) Salmo salar clone HM4_3735 ribosom... 35 6.1
AK003190_1(AK003190|pid:none) Mus musculus 18-day embryo whole b... 35 6.1
D63791_1(D63791|pid:none) Homo sapiens UbC gene for polyubiquiti... 35 6.1
AY813866_1(AY813866|pid:none) Schistosoma japonicum clone SJCHGC... 35 6.1
AB098891_1(AB098891|pid:none) Bos taurus mRNA for similar to ubi... 35 6.1
AK291539_1(AK291539|pid:none) Homo sapiens cDNA FLJ75516 complet... 35 6.1
DQ288858_45(DQ288858|pid:none) Spodoptera litura granulovirus is... 35 6.1
AL117514_1(AL117514|pid:none) Homo sapiens mRNA; cDNA DKFZp434K0... 35 6.1
DQ353761_1(DQ353761|pid:none) Ictalurus punctatus isolate C16JH0... 35 6.1
EF988652_1(EF988652|pid:none) Penaeus monodon Ubc protein mRNA, ... 35 6.1
EU558350_1(EU558350|pid:none) Phoronis muelleri putative ubiquit... 35 6.1
BT058174_1(BT058174|pid:none) Salmo salar clone Contig1232 Ubiqu... 35 6.1
BC114001_1(BC114001|pid:none) Bos taurus polyubiquitin, mRNA (cD... 35 6.1
BC019850_1(BC019850|pid:none) Mus musculus ubiquitin B, mRNA (cD... 35 6.1
AK007273_1(AK007273|pid:none) Mus musculus adult male testis cDN... 35 6.1
FN316689_1(FN316689|pid:none) Schistosoma japonicum isolate Anhu... 35 6.1
UQFFM(A02575)ubiquitin - Mediterranean fruit fly 35 6.1
BC166513_1(BC166513|pid:none) Rattus norvegicus ubiquitin-like 4... 35 6.1
DQ216251_1(DQ216251|pid:none) Taeniopygia guttata clone 0063P002... 35 6.1
BT079002_1(BT079002|pid:none) Esox lucius clone eluc-evq-516-246... 35 6.1
AJ965276_1(AJ965276|pid:none) Epidinium ecaudatum partial mRNA f... 35 6.1
BC049478_1(BC049478|pid:none) Danio rerio zgc:66168, mRNA (cDNA ... 35 6.1
AJ965269_1(AJ965269|pid:none) Metadinium medium partial mRNA for... 35 6.1
AB009010_1(AB009010|pid:none) Homo sapiens UbC1 mRNA for polyubi... 35 6.1
AY072292_1(AY072292|pid:none) Spodoptera frugiperda ribosomal pr... 35 6.1
S11296(S11296)polyubiquitin (clone arf3) - mouse (fragment) 35 6.1
AK018706_1(AK018706|pid:none) Mus musculus adult male kidney cDN... 35 6.1
AF348700_1(AF348700|pid:none) Homo sapiens ubiquitin A-52 residu... 35 6.1
(P84589) RecName: Full=Ubiquitin; Flags: Fragment; 35 6.1
DQ673439_1(DQ673439|pid:none) Diaphorina citri putative ubiquiti... 35 6.1
AY394942_1(AY394942|pid:none) Danio rerio clone RK046A2G11 ubiqu... 35 6.1
BC167447_1(BC167447|pid:none) Danio rerio zgc:172187, mRNA (cDNA... 35 6.1
D63782_1(D63782|pid:none) Cricetulus sp. gene for polyubiquitin,... 35 6.1
M10939_1(M10939|pid:none) Human ubiquitin mRNA, 3' end. 35 6.1
AK013873_1(AK013873|pid:none) Mus musculus 12 days embryo head c... 35 6.1
DQ216246_1(DQ216246|pid:none) Taeniopygia guttata clone 0058P001... 35 6.1
AF104026_1(AF104026|pid:none) Bovine viral diarrhea virus-2 subg... 35 6.1
EF473650_1(EF473650|pid:none) Sus scrofa ubiquitin B (UBB) gene,... 35 6.1
AK168448_1(AK168448|pid:none) Mus musculus 17 days embryo kidney... 35 6.1
AL953908_5(AL953908|pid:none) Zebrafish DNA sequence from clone ... 35 6.1
AF323508_1(AF323508|pid:none) Synthetic construct HPV type 6b hu... 35 6.1
AB291582_1(AB291582|pid:none) Solea senegalensis rpS27a mRNA for... 35 6.1
AB099083_1(AB099083|pid:none) Bos taurus mRNA for similar to pol... 35 6.1
BT073985_1(BT073985|pid:none) Oncorhynchus mykiss clone omyk-evo... 35 6.1
FN316697_1(FN316697|pid:none) Schistosoma japonicum isolate Anhu... 35 6.1
BC054976_1(BC054976|pid:none) Xenopus laevis ubiquitin C, mRNA (... 35 6.1
M22218_1(M22218|pid:none) Synthetic human ubiquitin gene (Thr66-... 35 6.1
DQ445503_1(DQ445503|pid:none) Graphocephala atropunctata isolate... 35 6.1
AY732488_1(AY732488|pid:none) Homo sapiens ubiquitin C splice va... 35 6.1
I45964(I45964) polyubiquitin - bovine (fragment) &M62428_1(M624... 35 6.1
BC157791_1(BC157791|pid:none) Xenopus tropicalis hypothetical pr... 35 6.1
(P0C274) RecName: Full=Ubiquitin; &(P62972) RecName: Fu &(P6297... 35 6.1
FN323949_1(FN323949|pid:none) Schistosoma japonicum isolate Anhu... 35 6.1
BT058428_1(BT058428|pid:none) Salmo salar clone Contig656 Ubiqui... 35 6.1
FN323948_1(FN323948|pid:none) Schistosoma japonicum isolate Anhu... 35 6.1
CR940347_507(CR940347|pid:none) Theileria annulata strain Ankara... 35 6.1
AF104023_1(AF104023|pid:none) Bovine viral diarrhea virus-2 subg... 35 6.1
AC079933_43(AC079933|pid:none) Trypanosoma brucei chromosome 4 c... 35 6.1
FN320998_1(FN320998|pid:none) Schistosoma japonicum isolate Anhu... 35 6.1
DQ216239_1(DQ216239|pid:none) Taeniopygia guttata clone 0058P004... 35 6.1
L13783_1(L13783|pid:none) Bovine viral diarrhea virus p125 prote... 35 6.1
BT075650_1(BT075650|pid:none) Osmerus mordax clone omor-rgc-508-... 35 6.1
AF104024_1(AF104024|pid:none) Bovine viral diarrhea virus-2 subg... 35 6.1
(O46543) RecName: Full=Ubiquitin; 35 6.1
AF045474_1(AF045474|pid:none) Schistosoma mansoni polyubiquitin ... 35 6.1
X94621_1(X94621|pid:none) C.alpestris ubiquitin gene. 35 6.1
AM040011_1(AM040011|pid:none) Agriotes lineatus mRNA for ubiquit... 35 6.1
AY254344_1(AY254344|pid:none) Schistosoma japonicum polyubiquiti... 35 6.1
X08013_1(X08013|pid:none) Chinese hamster mRNA for ubiquitin. 35 6.1
M17597_1(M17597|pid:none) Human poly-ubiquitin mRNA, complete cds. 35 6.1
BT083357_1(BT083357|pid:none) Anoplopoma fimbria clone afim-evh-... 35 6.1
BT049653_1(BT049653|pid:none) Salmo salar clone ssal-evd-544-065... 35 6.1
D83208_1(D83208|pid:none) Cavia cobaya mRNA for ubiquitin, compl... 35 6.1
DQ216250_1(DQ216250|pid:none) Taeniopygia guttata clone 0058P002... 35 6.1
AJ965257_1(AJ965257|pid:none) Dasytricha ruminantium partial mRN... 35 6.1
AF104021_1(AF104021|pid:none) Bovine viral diarrhea virus-2 subg... 35 6.1
AF481059_1(AF481059|pid:none) Aplysia californica ubiquitin/ribo... 35 6.1
EU247124_1(EU247124|pid:none) Lycosa singoriensis 60S ribosomal ... 35 6.1
A62334_1(A62334|pid:none) Sequence 22 from Patent WO9712992. &A... 35 6.1
DQ420617_1(DQ420617|pid:none) Anser anser ubiquitin C II mRNA, c... 35 6.1
AE014134_744(AE014134|pid:none) Drosophila melanogaster chromoso... 35 6.1
AB098769_1(AB098769|pid:none) Bos taurus mRNA for similar to pol... 35 6.1
FN323968_1(FN323968|pid:none) Schistosoma japonicum isolate Anhu... 35 6.1
BT048991_1(BT048991|pid:none) Salmo salar clone ssal-evf-534-259... 35 6.1
AF361365_1(AF361365|pid:none) Oncorhynchus mykiss polyubiquitin ... 35 6.1
X02650_1(X02650|pid:none) Chicken mRNA for ubiquitin. 35 6.1
EU599044_1(EU599044|pid:none) Mus musculus TU11 isoform B (Tu11)... 35 6.1
AJ388512_1(AJ388512|pid:none) Canis familiaris mRNA for ubiquiti... 35 6.1
M62429_1(M62429|pid:none) Bovine polyubiquitin mRNA, 3' end, clo... 35 6.1
U61404_1(U61404|pid:none) Manduca sexta polyubiquitin gene, 5' r... 35 6.1
AY752793_1(AY752793|pid:none) Culicoides sonorensis clone CsARU ... 35 6.1
BT073019_1(BT073019|pid:none) Oncorhynchus mykiss clone omyk-evn... 35 6.1
D17296_1(D17296|pid:none) Rattus norvegicus mRNA for polyubiquit... 35 6.1
AM049143_1(AM049143|pid:none) Dascillus cervinus mRNA for riboso... 35 6.1
AB111967_1(AB111967|pid:none) Bovine viral diarrhea virus T-20 g... 35 6.1
AF517849_1(AF517849|pid:none) Griffithsia japonica isolate Gj532... 35 6.1
BT043771_1(BT043771|pid:none) Salmo salar clone HM6_1209 ubiquit... 35 6.1
M11691_1(M11691|pid:none) Synthetic beta-galactosidase/mouse ubi... 35 6.1
FN316696_1(FN316696|pid:none) Schistosoma japonicum isolate Anhu... 35 6.1
AY771321_1(AY771321|pid:none) Scleronephthya gracillimum ubuiqui... 35 6.1
AB089615_1(AB089615|pid:none) Gorilla gorilla UbC gene for polyu... 35 6.1
AB099044_1(AB099044|pid:none) Bos taurus mRNA for similar to pol... 35 6.1
BC053371_1(BC053371|pid:none) Homo sapiens ribosomal protein S27... 35 6.1
M24507_1(M24507|pid:none) Synthetic human ubiquitin (UBCEP80) ge... 35 6.1
FJ890359_1(FJ890359|pid:none) Oncorhynchus tshawytscha ubiquitin... 35 6.1
X74405_5(X74405|pid:none) Artemia franciscana gene for polyubiqu... 35 6.1
AF104025_1(AF104025|pid:none) Bovine viral diarrhea virus-2 subg... 35 6.1
CQ904363_1(CQ904363|pid:none) Sequence 1 from Patent WO2004085466. 35 6.1
A29584(A29584) ubiquitin precursor - pig (fragment) &M18159_1(M... 35 6.1
BT058528_1(BT058528|pid:none) Salmo salar clone Contig1643 Ubiqu... 35 6.1
FN357410_7(FN357410|pid:none) Schistosoma mansoni genome sequenc... 35 6.1
DQ216243_1(DQ216243|pid:none) Taeniopygia guttata clone 0058P001... 35 6.1
L19056_1(L19056|pid:none) Artemia franciscana ubiquitin mRNA, pa... 35 6.1
M22217_1(M22217|pid:none) Synthetic human ubiquitin gene (Phe4- ... 35 6.1
EU306853_1(EU306853|pid:none) Drosophila silvestris clone sv3E-T... 35 6.1
UQWO7A(S13136) ubiquitin / ribosomal protein S27a - tobacco horn... 35 6.1
DQ216252_1(DQ216252|pid:none) Taeniopygia guttata clone 0058P000... 35 6.1

>(Q54JB0) RecName: Full=Protein DDI1 homolog;
Length = 450

Score = 356 bits (913), Expect(3) = e-173
Identities = 191/245 (77%), Positives = 191/245 (77%)
Frame = +3

Query: 774 PEVFASVYMLYIECSINGHPLKAFVDTGAQQXIMSEKCAERCEISRIIDTRFHGIAKGVG 953
PEVFASVYMLYIECSINGHPLKAFVDTGAQQ IMSEKCAERCEISRIIDTRFHGIAKGVG
Sbjct: 195 PEVFASVYMLYIECSINGHPLKAFVDTGAQQSIMSEKCAERCEISRIIDTRFHGIAKGVG 254

Query: 954 TSKIIGRVHSTDLKLGNSLFSVSLSILQNQDVDFILGLDMLKRHQVILDLNRGVLQIANE 1133
TSKIIGRVHSTDLKLGNSLFSVSLSILQNQDVDFILGLDMLKRHQVILDLNRGVLQIANE
Sbjct: 255 TSKIIGRVHSTDLKLGNSLFSVSLSILQNQDVDFILGLDMLKRHQVILDLNRGVLQIANE 314

Query: 1134 KIEFLHEKDLKEILNKEQNDLEEDTKKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 1313
KIEFLHEKDLKEILNKEQNDLEEDTKKA V
Sbjct: 315 KIEFLHEKDLKEILNKEQNDLEEDTKKATANSLSPSTTSTTTTTTTTTSPQTPTNATSPV 374

Query: 1314 XXXXXXXXXXXXTRPPINSPPVAKXXXXXXXXXXNQYASESNIQTLIGLGCSRDKAIRLL 1493
TRPPINSPPVAK NQYASESNIQTLIGLGCSRDKAIRLL
Sbjct: 375 NNNNNNNNNNNNTRPPINSPPVAKTPQPTPQPTTNQYASESNIQTLIGLGCSRDKAIRLL 434

Query: 1494 TQAKG 1508
TQAKG
Sbjct: 435 TQAKG 439

Score = 270 bits (691), Expect(3) = e-173
Identities = 142/167 (85%), Positives = 142/167 (85%)
Frame = +1

Query: 190 MAEITISIENENFIQVNLQPDQTVEDLKRRVEFETTILVNNQVLTLDGKVLDNEKKLSDY 369
MAEITISIENENFIQVNLQPDQTVEDLKRRVEFETTILVNNQVLTLDGKVLDNEKKLSDY
Sbjct: 1 MAEITISIENENFIQVNLQPDQTVEDLKRRVEFETTILVNNQVLTLDGKVLDNEKKLSDY 60

Query: 370 SIKGGDFLLITKNVLRAXXXXXXXXXXXXXXXXXXXXXXXXXDPLNSPQDILDHFTNNPE 549
SIKGGDFLLITKNVLRA DPLNSPQDILDHFTNNPE
Sbjct: 61 SIKGGDFLLITKNVLRAPQQRSQQPQQPQQPQQPQQQRQPQRDPLNSPQDILDHFTNNPE 120

Query: 550 DLTQVINSNPALANAILSKDMKFLTHFVEQIKEQRRIQELALKDPYG 690
DLTQVINSNPALANAILSKDMKFLTHFVEQIKEQRRIQELALKDPYG
Sbjct: 121 DLTQVINSNPALANAILSKDMKFLTHFVEQIKEQRRIQELALKDPYG 167

Score = 30.0 bits (66), Expect(3) = e-173
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1

Query: 1504 KGNVDVAASMFFG 1542
KGNVDVAASMFFG
Sbjct: 438 KGNVDVAASMFFG 450

Score = 67.0 bits (162), Expect = 2e-09
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = +2

Query: 692 EEYQKLAYQHIQQQNIEKNMQHAMEHTP*SICLSLYVIY 808
EEYQKLAYQHIQQQNIEKNMQHAMEHTP + S+Y++Y
Sbjct: 168 EEYQKLAYQHIQQQNIEKNMQHAMEHTP-EVFASVYMLY 205

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,992,214,366
Number of extensions: 33423786
Number of successful extensions: 80389
Number of sequences better than 10.0: 554
Number of HSP's gapped: 80319
Number of HSP's successfully gapped: 982
Length of query: 537
Length of database: 1,061,185,681
Length adjustment: 134
Effective length of query: 403
Effective length of database: 623,213,649
Effective search space: 251155100547
Effective search space used: 251155100547
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.70 gvh: 0.48 alm: 0.46 top: 0.53 tms: 0.00 mit: 0.30 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: nuclear
36.0 %: cytoplasmic
16.0 %: mitochondrial

>> prediction for Contig-U16317-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 3
AH (FL, L) 0
AF (FL, S) 51
SL (DIR, L) 3
SS (DIR, S) 0
SH (FL, L) 1
SF (FL, S) 21
CH (FL, L) 5
CF (FL, S) 9
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0