| Contig-U16307-1 |
| Contig ID |
Contig-U16307-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
1653 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
7592717 |
| End point |
7593869 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
43 |
| Number of EST |
47 |
| Link to clone list |
U16307 |
| List of clone(s) |
est1=SLF589F,1,286
est2=SSD176F,29,662
est3=VHN617Z,98,705
est4=SSB830F,117,789
est5=SLA748F,209,810
est6=VFD563Z,217,806
est7=SSF346F,221,798
est8=CHM770E,295,1398
est9=SFL442E,322,1620
est10=SSA746E,342,1116
est11=VHQ475Z,345,1049
est12=SSM278Z,375,992
est13=VSE260Z,392,945
est14=CFG220Z,452,691
est15=SFL117Z,474,1086
est16=SSM591F,509,671
est17=VHG638Z,518,1037
est18=SHC302F,529,908
est19=SHC302Z,529,767
est20=AHQ730Z,558,1129
est21=AHD567F,608,1180
est22=SSC674Z,618,1238
est23=CHG654F,623,1250
est24=AHK266F,652,1192
est25=VSF172F,694,944
est26=SHH148F,702,1270
est27=VHH612Z,714,1035
est28=SSI887Z,729,1185
est29=VHJ842Z,735,1040
est30=VHH175Z,738,1008
est31=SLK522Z,741,1253
est32=AHB531Z,757,988
est33=CHP346Z,770,1422
est34=CHP158Z,793,970
est35=SLH502Z,821,1189
est36=SSM554Z,821,1190
est37=VSC235Z,836,1150
est38=CHK804Z,840,980
est39=SSB830Z,860,1253
est40=CHQ659Z,921,1653
est41=SSD732E,976,1443
est42=CHQ330Z,982,1610
est43=SLF589Z,995,1242
est44=SSE893Z,996,1352
est45=SLF856Z,1039,1253
est46=SLA748Z,1059,1430
est47=SSB305E,1089,1352
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 3.26 |
| Homology vs DNA |
Query= Contig-U16307-1 (Contig-U16307-1Q) /CSM_Contig/Contig-U16307-1Q.Seq.d
(1653 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU060257) Dictyostelium discoideum slug cDNA, clone SLA748. 932 0.0 1
(BJ385272) Dictyostelium discoideum cDNA clone:ddc54l07, 3' ... 377 0.0 3
(BJ385614) Dictyostelium discoideum cDNA clone:ddc55e16, 3' ... 377 0.0 3
(BJ401449) Dictyostelium discoideum cDNA clone:dds23d12, 3' ... 377 0.0 4
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 377 0.0 3
(U68754) Dictyostelium discoideum putative transcription fac... 353 0.0 3
(AU061733) Dictyostelium discoideum slug cDNA, clone SLF589. 567 e-157 1
(AU072009) Dictyostelium discoideum slug cDNA, clone SSD176. 476 e-129 1
(AU071583) Dictyostelium discoideum slug cDNA, clone SSB830. 476 e-129 1
(EK385731) 1095469482325 Global-Ocean-Sampling_GS-31-01-01-1... 70 2e-08 3
(EK447770) 1095467054918 Global-Ocean-Sampling_GS-32-01-01-1... 70 3e-08 3
(EK230894) 1095460179049 Global-Ocean-Sampling_GS-31-01-01-1... 70 5e-08 2
(EK465380) 1095469420462 Global-Ocean-Sampling_GS-32-01-01-1... 72 7e-08 1
(EK417830) 1095515480128 Global-Ocean-Sampling_GS-31-01-01-1... 70 2e-07 2
(EK455231) 1095468068524 Global-Ocean-Sampling_GS-32-01-01-1... 70 2e-07 2
(EK144032) 1095456011090 Global-Ocean-Sampling_GS-31-01-01-1... 70 2e-07 2
(EJ549691) 1092959431709 Global-Ocean-Sampling_GS-29-01-01-1... 70 2e-07 2
(EJ570450) 1092960035442 Global-Ocean-Sampling_GS-29-01-01-1... 70 2e-07 2
(ER431708) 1092963780580 Global-Ocean-Sampling_GS-35-01-01-1... 70 3e-07 1
(EJ435826) 1093015279386 Global-Ocean-Sampling_GS-28-01-01-1... 60 3e-07 2
(EK112188) 1092963125120 Global-Ocean-Sampling_GS-31-01-01-1... 68 1e-06 1
(ER540760) 1093016039067 Global-Ocean-Sampling_GS-35-01-01-1... 58 1e-05 2
(EK139204) 1095454061901 Global-Ocean-Sampling_GS-31-01-01-1... 62 3e-05 2
(AY810305) Schistosoma japonicum SJCHGC03352 protein mRNA, p... 52 3e-05 2
(CV685513) sjs2-003_B03_sjs2-003B03-T3 SJS Schistosoma japon... 52 3e-05 2
(CV685936) sjs2-009_B01_sjs2-009B01-T3 SJS Schistosoma japon... 52 3e-05 2
(EK139855) 1095454078955 Global-Ocean-Sampling_GS-31-01-01-1... 62 4e-05 2
(EJ985120) 1093023005804 Global-Ocean-Sampling_GS-30-02-01-1... 62 4e-05 2
(EJ191490) 1092344201231 Global-Ocean-Sampling_GS-27-01-01-1... 62 4e-05 2
(CD380892) PTMM06061 Phaeodactylum tricornutum Uni-Zap XR Ph... 56 4e-05 2
(EJ471077) 1095403411419 Global-Ocean-Sampling_GS-28-01-01-1... 62 4e-05 2
(CT936733) Phaeodactylum tricornutum 5-PRIME EST from clone ... 56 5e-05 2
(ER363015) 1093017975887 Global-Ocean-Sampling_GS-34-01-01-1... 62 7e-05 1
(ER291279) 1092343604768 Global-Ocean-Sampling_GS-34-01-01-1... 62 7e-05 1
(EK071006) 1092960192418 Global-Ocean-Sampling_GS-31-01-01-1... 62 7e-05 1
(EJ640828) 1093011490225 Global-Ocean-Sampling_GS-29-01-01-1... 62 7e-05 1
(EJ626796) 1092963195903 Global-Ocean-Sampling_GS-29-01-01-1... 62 7e-05 1
(EJ596793) 1092961094254 Global-Ocean-Sampling_GS-29-01-01-1... 62 7e-05 1
(BJ420540) Dictyostelium discoideum cDNA clone:ddv39j15, 5' ... 44 1e-04 2
(EJ885776) 1093018416833 Global-Ocean-Sampling_GS-30-02-01-1... 48 1e-04 2
(EJ811345) 1093017491397 Global-Ocean-Sampling_GS-30-02-01-1... 48 2e-04 2
(EJ640448) 1093011482770 Global-Ocean-Sampling_GS-29-01-01-1... 60 3e-04 1
(EJ629374) 1092963298063 Global-Ocean-Sampling_GS-29-01-01-1... 60 3e-04 1
(EJ454634) 1093016071751 Global-Ocean-Sampling_GS-28-01-01-1... 60 3e-04 1
(EJ111056) 1092343154647 Global-Ocean-Sampling_GS-27-01-01-1... 60 3e-04 1
(EY843384) CA26-C1-002-013-C11-CT.F Sour orange leaf, field ... 54 5e-04 2
(CO176582) NDL1_62_H03.g1_A029 Needles control Pinus taeda c... 58 5e-04 2
(EY775268) CR05-C1-103-008-B06-CT.F Mandarin leaf, infected ... 54 6e-04 2
(EY884538) LT33-C1-003-095-G05-CT.F Tahiti lime leaf, greenh... 54 6e-04 2
(EK327230) 1095467010873 Global-Ocean-Sampling_GS-31-01-01-1... 58 0.001 1
(EJ464460) 1095388035932 Global-Ocean-Sampling_GS-28-01-01-1... 58 0.001 1
(EJ261772) 1095349045602 Global-Ocean-Sampling_GS-27-01-01-1... 58 0.001 1
(DR012791) HEAT1_15_C01.b1_A029 Root at 37 C for 24 hr Pinus... 58 0.001 1
(CN635228) 112F03_544715 Douglas-fir cDNA library PmIFG_73-6... 58 0.001 1
(FF549051) MOPEE64TR MOP Vigna unguiculata cDNA 3', mRNA seq... 46 0.002 2
(ER368082) 1093022135208 Global-Ocean-Sampling_GS-34-01-01-1... 56 0.002 2
(FG887588) UCRVU07_CCNP9721_b1 Cowpea UCR 779 Mixed Tissue a... 46 0.002 2
(FF552064) MOPEE64TF MOP Vigna unguiculata cDNA 5', mRNA seq... 46 0.002 2
(EK202953) 1095460063912 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.002 2
(EK399092) 1095469533491 Global-Ocean-Sampling_GS-31-01-01-1... 56 0.002 2
(EK226175) 1095460159787 Global-Ocean-Sampling_GS-31-01-01-1... 52 0.002 2
(ER414932) 1095390119957 Global-Ocean-Sampling_GS-34-01-01-1... 56 0.004 1
(ER372752) 1093025180545 Global-Ocean-Sampling_GS-34-01-01-1... 56 0.004 1
(EK275673) 1095462275459 Global-Ocean-Sampling_GS-31-01-01-1... 56 0.004 1
(EJ983090) 1093022168648 Global-Ocean-Sampling_GS-30-02-01-1... 56 0.004 1
(EJ946258) 1093018915482 Global-Ocean-Sampling_GS-30-02-01-1... 56 0.004 1
(EJ384015) 1092963788819 Global-Ocean-Sampling_GS-28-01-01-1... 56 0.004 1
(EL342820) CCEL10813.b1_I15.ab1 CCE(LMS) endive Cichorium en... 56 0.004 1
(CP000655) Polynucleobacter sp. QLW-P1DMWA-1, complete genome. 56 0.004 1
(CO109235) GR__Eb0041I08.r GR__Eb Gossypium raimondii cDNA c... 46 0.007 2
(DT544789) EST1055429 GH_TMO Gossypium hirsutum cDNA, mRNA s... 46 0.008 2
(DT544932) EST1055572 GH_TMO Gossypium hirsutum cDNA, mRNA s... 46 0.008 2
(EK325908) 1095467006882 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.008 2
(ES801563) UFL_605_39 Cotton fiber 0-10 day post anthesis Go... 46 0.008 2
(ER587649) 1093016160587 Global-Ocean-Sampling_GS-36-01-01-2... 54 0.017 1
(ER529340) 1093015736119 Global-Ocean-Sampling_GS-35-01-01-1... 54 0.017 1
(ER410397) 1095368029852 Global-Ocean-Sampling_GS-34-01-01-1... 54 0.017 1
(ER379734) 1094338632773 Global-Ocean-Sampling_GS-34-01-01-1... 54 0.017 1
(ER290875) 1092343600871 Global-Ocean-Sampling_GS-34-01-01-1... 54 0.017 1
(EJ477642) 1095403451602 Global-Ocean-Sampling_GS-28-01-01-1... 54 0.017 1
(EJ445015) 1093015324304 Global-Ocean-Sampling_GS-28-01-01-1... 54 0.017 1
(EJ410886) 1093012141968 Global-Ocean-Sampling_GS-28-01-01-1... 54 0.017 1
(EJ339626) 1092963505767 Global-Ocean-Sampling_GS-28-01-01-1... 54 0.017 1
(EJ313285) 1095403247382 Global-Ocean-Sampling_GS-27-01-01-1... 54 0.017 1
(EJ129967) 1092343425201 Global-Ocean-Sampling_GS-27-01-01-1... 54 0.017 1
(EY789144) CR05-C3-700-030-C11-CT.F Mandarin fruit, developm... 54 0.017 1
(EK078732) 1092961080772 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.030 2
(EK403757) 1095469555845 Global-Ocean-Sampling_GS-31-01-01-1... 44 0.036 3
(DR522639) WS02712.C21_E21 SS-IL-A-FL-14 Picea sitchensis cD... 50 0.064 2
(DR488226) WS0289.B21_G15 SS-IB-A-FL-13 Picea sitchensis cDN... 50 0.068 2
(DR487145) WS0286.B21_C14 SS-IB-A-FL-13 Picea sitchensis cDN... 50 0.068 2
(DR482422) WS0289.BR_G15 SS-IB-A-FL-13 Picea sitchensis cDNA... 50 0.068 2
(DR481415) WS0286.BR_C14 SS-IB-A-FL-13 Picea sitchensis cDNA... 50 0.068 2
(DR536484) WS02749.C21_E21 SS-IL-A-FL-14 Picea sitchensis cD... 50 0.068 2
(DR530748) WS02733.C21_H08 SS-IL-A-FL-14 Picea sitchensis cD... 50 0.068 2
(DR526490) WS02722.C21_A17 SS-IL-A-FL-14 Picea sitchensis cD... 50 0.068 2
(DR522855) WS02712.C21_O16 SS-IL-A-FL-14 Picea sitchensis cD... 50 0.068 2
(DR518465) WS02749.CR_E21 SS-IL-A-FL-14 Picea sitchensis cDN... 50 0.068 2
(DR512571) WS02733.CR_H08 SS-IL-A-FL-14 Picea sitchensis cDN... 50 0.068 2
(DR508432) WS02722.CR_A17 SS-IL-A-FL-14 Picea sitchensis cDN... 50 0.068 2
(DR504998) WS02712.CR_O16 SS-IL-A-FL-14 Picea sitchensis cDN... 50 0.068 2
(DR504820) WS02712.CR_E21 SS-IL-A-FL-14 Picea sitchensis cDN... 50 0.068 2
(DR482909) WS0281.B21_N20 SS-IB-A-FL-13 Picea sitchensis cDN... 50 0.068 2
(DR477284) WS0281.BR_N20 SS-IB-A-FL-13 Picea sitchensis cDNA... 50 0.068 2
(ES877576) WS02935.CR_B18 SS-IB-A-FL-15 Picea sitchensis cDN... 50 0.068 2
(ES866665) WS02795.CR_N13 SS-IL-A-FL-14 Picea sitchensis cDN... 50 0.068 2
(ES862563) WS02787.CR_M02 SS-IL-A-FL-14 Picea sitchensis cDN... 50 0.068 2
(ES858839) WS02776.CR_G22 SS-IL-A-FL-14 Picea sitchensis cDN... 50 0.068 2
(ES856306) WS02768.CR_J07 SS-IL-A-FL-14 Picea sitchensis cDN... 50 0.068 2
(ES853821) WS02759.CR_O21 SS-IL-A-FL-14 Picea sitchensis cDN... 50 0.068 2
(EJ890132) 1093018438279 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.068 1
(EJ849343) 1093017872538 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.068 1
(EJ802980) 1093017441323 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.068 1
(EJ026108) 1095454026127 Global-Ocean-Sampling_GS-26-01-01-1... 52 0.068 1
(EH763106) CNSL9108.b1_G22.ab1 CNS(LMS) yellow starthistle C... 36 0.083 3
(ER349181) 1092345447869 Global-Ocean-Sampling_GS-34-01-01-1... 38 0.089 2
(EJ620217) 1092963051798 Global-Ocean-Sampling_GS-29-01-01-1... 48 0.11 2
(FE702902) Pv053C_M13F_G05.ab1 Phaseolus vulgaris cv Early g... 40 0.11 2
(EX396255) GQ03407.B7_B18 GQ034 - Needles - Mid-season Picea... 50 0.12 2
(GE471925) GQ0015.B3.r_C24 GQ001: Male strobili developmenta... 50 0.12 2
(EK219409) 1095460135649 Global-Ocean-Sampling_GS-31-01-01-1... 44 0.12 2
(AI940895) sb79d01.y1 Gm-c1010 Glycine max cDNA clone GENOME... 38 0.24 2
(ER596731) 1093016225340 Global-Ocean-Sampling_GS-36-01-01-2... 50 0.27 1
(ER572810) 1093015800018 Global-Ocean-Sampling_GS-36-01-01-2... 50 0.27 1
(ER480869) 1093015262534 Global-Ocean-Sampling_GS-35-01-01-1... 50 0.27 1
(ER417155) 1092963677172 Global-Ocean-Sampling_GS-35-01-01-1... 50 0.27 1
(ER413468) 1095390029692 Global-Ocean-Sampling_GS-34-01-01-1... 50 0.27 1
(ER353615) 1092347071945 Global-Ocean-Sampling_GS-34-01-01-1... 50 0.27 1
(ER293541) 1092343627340 Global-Ocean-Sampling_GS-34-01-01-1... 50 0.27 1
(ER284808) 1092343550375 Global-Ocean-Sampling_GS-34-01-01-1... 50 0.27 1
(EK563371) 1095521027999 Global-Ocean-Sampling_GS-32-01-01-1... 50 0.27 1
(EK439560) 1095521701072 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.27 1
(EK328476) 1095467015087 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.27 1
(EK270913) 1095462256448 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.27 1
(EK197947) 1095460045946 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.27 1
(EK047989) 1092959655622 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.27 1
(EK037063) 1092959470810 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.27 1
(EK014494) 1092955223812 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.27 1
(EJ998667) 1093025004767 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.27 1
(EJ997942) 1093025002079 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.27 1
(EJ977740) 1093022130822 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.27 1
(EJ943188) 1093018898241 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.27 1
(EJ771476) 1092968100490 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.27 1
(EJ740395) 1092962013354 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.27 1
(EJ707651) 1092956061026 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.27 1
(EJ692986) 1092956009342 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.27 1
(EJ671189) 1092955060074 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.27 1
(EJ587152) 1092961024985 Global-Ocean-Sampling_GS-29-01-01-1... 50 0.27 1
(EJ529738) 1092955212651 Global-Ocean-Sampling_GS-29-01-01-1... 50 0.27 1
(EJ452641) 1093015441485 Global-Ocean-Sampling_GS-28-01-01-1... 50 0.27 1
(EJ394918) 1093011992732 Global-Ocean-Sampling_GS-28-01-01-1... 50 0.27 1
(EJ366417) 1092963707243 Global-Ocean-Sampling_GS-28-01-01-1... 50 0.27 1
(EJ125648) 1092343393056 Global-Ocean-Sampling_GS-27-01-01-1... 50 0.27 1
(EI484782) PV_GBa0098K13.f PV_GBa Phaseolus vulgaris genomic... 50 0.27 1
(CO219053) WS0106.B21_A11 SS-R-N-A-11 Picea sitchensis cDNA ... 50 0.27 1
(GE603880) CCPX11991.b1_M21.ab1 CCP(UWX) Globe Artichoke Cyn... 50 0.27 1
(CV004971) pam01-3ms2-g02 Pam01 Persea americana cDNA clone ... 46 0.33 2
(DV693196) CGN-37292 Leaf Coffea canephora cDNA clone cccl22... 46 0.35 2
(EH727361) CNMM13798.b1_L18.ab1 CNM(LMS) spotted knapweed Ce... 38 0.40 2
(FG990376) GLLD420TF JCVI-SOY1 Glycine max cDNA 5', mRNA seq... 38 0.43 2
(AC154718) Mus musculus BAC clone RP24-370G12 from 14, compl... 48 1.1 1
(AM452062) Vitis vinifera contig VV78X277216.7, whole genome... 48 1.1 1
(AM438010) Vitis vinifera contig VV78X268557.8, whole genome... 48 1.1 1
(AM436195) Vitis vinifera contig VV78X263046.18, whole genom... 48 1.1 1
(AC191213) Sorex araneus clone SA_Ba-218A6, WORKING DRAFT SE... 48 1.1 1
(FH119470) CHO_OF3281xe06r1.ab1 CHO_OF3 Nicotiana tabacum ge... 48 1.1 1
(ER603798) 1093016262361 Global-Ocean-Sampling_GS-36-01-01-2... 48 1.1 1
(ER416575) 1092963673887 Global-Ocean-Sampling_GS-35-01-01-1... 48 1.1 1
(EK431699) 1095516156721 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.1 1
(EK408131) 1095505098463 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.1 1
(EK359367) 1095468894921 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.1 1
(EK338868) 1095467052927 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.1 1
(EK076638) 1092961048728 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.1 1
(EK072000) 1092961001112 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.1 1
(EJ972264) 1093022091290 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.1 1
(EJ929419) 1093018797880 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.1 1
(EJ641043) 1093011898623 Global-Ocean-Sampling_GS-29-01-01-1... 48 1.1 1
(EJ341857) 1092963520357 Global-Ocean-Sampling_GS-28-01-01-1... 48 1.1 1
(EJ234565) 1092405544560 Global-Ocean-Sampling_GS-27-01-01-1... 48 1.1 1
(CU839373) A BAC library has been constructed from PN40024 g... 48 1.1 1
(CU754849) A BAC library has been constructed from PN40024 g... 48 1.1 1
(AG920479) Drosophila auraria DNA, clone: DAB1-030K14.R.fa, ... 48 1.1 1
(EG662020) RCLFV79TP Castor bean cDNA library from leaves, 1... 48 1.1 1
(DY968670) CLSM19730.b1_D13.ab1 CLS(LMS) lettuce sativa Lact... 48 1.1 1
(DY966651) CLSM17807.b1_N11.ab1 CLS(LMS) lettuce sativa Lact... 48 1.1 1
(DY824308) CTOY15949.b1_I04.ab1 CTO(XYZ) dandelion Taraxacum... 48 1.1 1
(DY824221) CTOY15868.b1_H07.ab1 CTO(XYZ) dandelion Taraxacum... 48 1.1 1
(BQ984754) QGE5A01.yg.ab1 QG_EFGHJ lettuce serriola Lactuca ... 48 1.1 1
(GE535773) CCHS2233.b1_B08.ab1 CCHS Espina Barnadesia spinos... 48 1.1 1
(ER500153) 1093015396117 Global-Ocean-Sampling_GS-35-01-01-1... 40 1.5 2
(EX396384) GQ03407.B7_H10 GQ034 - Needles - Mid-season Picea... 46 1.6 2
(AC160994) Mus musculus BAC clone RP23-101K11 from chromosom... 46 4.2 1
(AC151987) Mus musculus BAC clone RP23-356C20 from chromosom... 46 4.2 1
(AC116955) Dictyostelium discoideum chromosome 2 map 5455881... 46 4.2 1
(AC098048) Rattus norvegicus clone CH230-115I10, WORKING DRA... 46 4.2 1
(AC230560) Bos taurus clone CH240-505E7, WORKING DRAFT SEQUE... 46 4.2 1
(AC214868) Chlorocebus aethiops clone CH252-21H23, WORKING D... 46 4.2 1
(AC212529) Chlorocebus aethiops clone CH252-172G9, WORKING D... 46 4.2 1
(AC209860) Zea mays chromosome 8 clone CH201-278N13; ZMMBBc0... 46 4.2 1
(AC208792) Zea mays chromosome 8 clone CH201-66G3; ZMMBBc006... 46 4.2 1
(FH652357) CHO_OF4394xg24r1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 4.2 1
(FH652285) CHO_OF4394xg24f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 4.2 1
(FH652214) CHO_OF4394xg23r1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 4.2 1
(FH652162) CHO_OF4394xg23f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 4.2 1
(FH118439) CHO_OF3261xf10f1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 4.2 1
(ET936729) CHO_OF103xg17r1.ab1 CHO_OF Nicotiana tabacum geno... 46 4.2 1
(ET930198) CHO_OF245xm17r1.ab1 CHO_OF Nicotiana tabacum geno... 46 4.2 1
(ER607951) 1093016289468 Global-Ocean-Sampling_GS-36-01-01-2... 46 4.2 1
(ER575154) 1093015808691 Global-Ocean-Sampling_GS-36-01-01-2... 46 4.2 1
(ER532146) 1093015776260 Global-Ocean-Sampling_GS-35-01-01-1... 46 4.2 1
(ER478746) 1093015251879 Global-Ocean-Sampling_GS-35-01-01-1... 46 4.2 1
(ER449734) 1092963844315 Global-Ocean-Sampling_GS-35-01-01-1... 46 4.2 1
(EK428381) 1095516060119 Global-Ocean-Sampling_GS-31-01-01-1... 46 4.2 1
(EK401527) 1095469541962 Global-Ocean-Sampling_GS-31-01-01-1... 46 4.2 1
(EK278700) 1095462286844 Global-Ocean-Sampling_GS-31-01-01-1... 46 4.2 1
(EK182460) 1095458128832 Global-Ocean-Sampling_GS-31-01-01-1... 46 4.2 1
(EJ645543) 1091120705736 Global-Ocean-Sampling_GS-30-01-01-1... 46 4.2 1
(EJ547561) 1092959286076 Global-Ocean-Sampling_GS-29-01-01-1... 46 4.2 1
(EJ452594) 1093015441434 Global-Ocean-Sampling_GS-28-01-01-1... 46 4.2 1
(EJ450441) 1093015416642 Global-Ocean-Sampling_GS-28-01-01-1... 46 4.2 1
(EJ442604) 1093015310682 Global-Ocean-Sampling_GS-28-01-01-1... 46 4.2 1
(EJ399162) 1093012023301 Global-Ocean-Sampling_GS-28-01-01-1... 46 4.2 1
(EJ377964) 1092963750308 Global-Ocean-Sampling_GS-28-01-01-1... 46 4.2 1
(EJ356134) 1092963639820 Global-Ocean-Sampling_GS-28-01-01-1... 46 4.2 1
(EJ351659) 1092963591969 Global-Ocean-Sampling_GS-28-01-01-1... 46 4.2 1
(EJ332659) 1092963451251 Global-Ocean-Sampling_GS-28-01-01-1... 46 4.2 1
(EJ321299) 1095403373783 Global-Ocean-Sampling_GS-27-01-01-1... 46 4.2 1
(EJ302171) 1095390035315 Global-Ocean-Sampling_GS-27-01-01-1... 46 4.2 1
(EJ277962) 1095366034878 Global-Ocean-Sampling_GS-27-01-01-1... 46 4.2 1
(EJ247853) 1095339022944 Global-Ocean-Sampling_GS-27-01-01-1... 46 4.2 1
(EJ197199) 1092344256047 Global-Ocean-Sampling_GS-27-01-01-1... 46 4.2 1
(EJ170547) 1092344081399 Global-Ocean-Sampling_GS-27-01-01-1... 46 4.2 1
(EH059300) CPAg07.z.esd subtracted cDNA library of drought s... 46 4.2 1
(DW155242) CLVX7278.b1_L20.ab1 CLV(XYZ) lettuce virosa Lactu... 46 4.2 1
(DW154130) CLVX6233.b1_A23.ab1 CLV(XYZ) lettuce virosa Lactu... 46 4.2 1
(DV146800) CV03070B2B08.f1 CV03-normalized library Euphorbia... 46 4.2 1
(CD197259) MS1-0094P-V358-H07-U.B MS1-0094 Schistosoma manso... 46 4.2 1
(BQ139159) NF011D06PH1F1047 Phoma-infected Medicago truncatu... 46 4.2 1
(FK420675) 454GmaGlobSeed155307 Soybean Seeds Containing Glo... 46 4.2 1
(FG859267) UCRVU05_CCNN22320_g1 Cowpea IT84S-2049 Mixed Tiss... 46 4.2 1
(FG858797) UCRVU05_CCNN22032_g1 Cowpea IT84S-2049 Mixed Tiss... 46 4.2 1
(FG147474) AGN_RPC005xm11f1.ab1 AGN_RPC Nicotiana tabacum cD... 46 4.2 1
(FG146898) AGN_RPC007xm17f1.ab1 AGN_RPC Nicotiana tabacum cD... 46 4.2 1
(CP000390) Mesorhizobium sp. BNC1, complete genome. 46 4.2 1
(CP000109) Thiomicrospira crunogena XCL-2, complete genome. 46 4.2 1
(AM167904) Bordetella avium 197N complete genome. 46 4.2 1
(DJ335452) CELL CYCLE GENES AND RELATED METHODS OF USING. 44 4.7 2
(EK013410) 1092955214225 Global-Ocean-Sampling_GS-31-01-01-1... 36 4.7 2
(AP010289) Lotus japonicus genomic DNA, chromosome 1, clone:... 38 5.5 4
(AJ277590) Dictyostelium discoideum iplA gene for inositol 1... 38 5.6 4
(FH976694) CHO_OF6821xe09r1.ab1 CHO_OF6 Nicotiana tabacum ge... 38 5.8 2
(GE603286) CCPX11434.b1_D04.ab1 CCP(UWX) Globe Artichoke Cyn... 36 5.8 2
(EK213405) 1095460107141 Global-Ocean-Sampling_GS-31-01-01-1... 44 5.8 2
(AC159267) Mus musculus BAC clone RP23-460B2 from chromosome... 32 7.6 2
(AL929269) Human DNA sequence from clone RP11-658E23 on chro... 38 7.8 3
(AC194967) Zea mays chromosome 3 clone CH201-11A21; ZMMBBc00... 38 9.0 3
>(AU060257) Dictyostelium discoideum slug cDNA, clone SLA748.
Length = 602
Score = 932 bits (470), Expect = 0.0
Identities = 470/470 (100%)
Strand = Plus / Plus
Query: 255 tccaatcacaacaactggtactgccactgttactccaggttccacaacaagtagtacaaa 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 tccaatcacaacaactggtactgccactgttactccaggttccacaacaagtagtacaaa 106
Query: 315 tggtgagcaatgcgaagatggtgatacattcgtaagcaaactatctttacatgccgccaa 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tggtgagcaatgcgaagatggtgatacattcgtaagcaaactatctttacatgccgccaa 166
Query: 375 aagatctgctggtgcaacttgtcaagccattgataacgttatgaaaggtaatgtaacaag 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 aagatctgctggtgcaacttgtcaagccattgataacgttatgaaaggtaatgtaacaag 226
Query: 435 tgcttttgttgccgctcgcccacctggtcatcatgctggtagagatggtttaactagtgg 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tgcttttgttgccgctcgcccacctggtcatcatgctggtagagatggtttaactagtgg 286
Query: 495 tactagttctcaaggattttgtctattgaatcatgtttgtattggtgctaaatacgctca 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tactagttctcaaggattttgtctattgaatcatgtttgtattggtgctaaatacgctca 346
Query: 555 actcaagtataatttagataaaattgcaatcattgatttcgatgttcatcatggaaatgg 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 actcaagtataatttagataaaattgcaatcattgatttcgatgttcatcatggaaatgg 406
Query: 615 taccgaagaaatattatcaaatgatcaaggtttctatttccttagtattcatatgtttga 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 taccgaagaaatattatcaaatgatcaaggtttctatttccttagtattcatatgtttga 466
Query: 675 agaaggtttctatcctggtagtggtggtggtgttggttcaattggtgtag 724
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 agaaggtttctatcctggtagtggtggtggtgttggttcaattggtgtag 516
Score = 103 bits (52), Expect = 2e-17
Identities = 52/52 (100%)
Strand = Plus / Minus
Query: 174 attggatgcaaatgaaattcgtccattaaatgtaaataatgatggtgcaagc 225
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 attggatgcaaatgaaattcgtccattaaatgtaaataatgatggtgcaagc 1
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,339,714,461
Number of extensions: 78051804
Number of successful extensions: 6483746
Number of sequences better than 10.0: 257
Length of query: 1653
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1629
Effective length of database: 96,409,374,237
Effective search space: 157050870632073
Effective search space used: 157050870632073
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.27 |
| Homology vs Protein |
Query= Contig-U16307-1 (Contig-U16307-1Q) /CSM_Contig/Contig-U16307-1Q.Seq.d
(1653 letters)
Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54X15) RecName: Full=Type-2 histone deacetylase 1; EC... 445 e-123
AC116977_1(AC116977|pid:none) Dictyostelium discoideum chromosom... 336 2e-90
(Q550D5) RecName: Full=Transcription factor stalky; AltName: Ful... 336 2e-90
CP000514_2470(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 119 3e-25
CP000872_411(CP000872|pid:none) Brucella canis ATCC 23365 chromo... 117 1e-24
AB3440(AB3440) acetylspermidine deacetylase (EC 3.5.1.48) [impor... 117 1e-24
AE017223_424(AE017223|pid:none) Brucella abortus biovar 1 str. 9... 116 3e-24
CP000758_540(CP000758|pid:none) Ochrobactrum anthropi ATCC 49188... 116 3e-24
CR954246_321(CR954246|pid:none) Pseudoalteromonas haloplanktis s... 114 8e-24
CP000316_3092(CP000316|pid:none) Polaromonas sp. JS666, complete... 113 2e-23
CP000655_508(CP000655|pid:none) Polynucleobacter necessarius sub... 113 2e-23
CP001635_3330(CP001635|pid:none) Variovorax paradoxus S110 chrom... 113 2e-23
CP000479_3212(CP000479|pid:none) Mycobacterium avium 104, comple... 113 2e-23
CP000480_164(CP000480|pid:none) Mycobacterium smegmatis str. MC2... 112 3e-23
CP000781_1145(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 112 4e-23
CP001281_2839(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 111 7e-23
CP000388_1737(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 110 1e-22
CP000510_2536(CP000510|pid:none) Psychromonas ingrahamii 37, com... 110 1e-22
CP001510_3501(CP001510|pid:none) Methylobacterium extorquens AM1... 110 2e-22
CP000489_394(CP000489|pid:none) Paracoccus denitrificans PD1222 ... 110 2e-22
CP000884_2378(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 110 2e-22
AE017340_2286(AE017340|pid:none) Idiomarina loihiensis L2TR, com... 109 3e-22
CP000283_4280(CP000283|pid:none) Rhodopseudomonas palustris BisB... 109 3e-22
AY458633_24(AY458633|pid:none) Uncultured marine bacterium 313 c... 109 3e-22
CU459003_2252(CU459003|pid:none) Magnetospirillum gryphiswaldens... 108 6e-22
CR555306_402(CR555306|pid:none) Azoarcus sp. EbN1 complete genome. 108 8e-22
CP000613_544(CP000613|pid:none) Rhodospirillum centenum SW, comp... 108 8e-22
CP000544_933(CP000544|pid:none) Halorhodospira halophila SL1, co... 108 8e-22
CP000529_56(CP000529|pid:none) Polaromonas naphthalenivorans CJ2... 108 8e-22
CP000512_2124(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 107 1e-21
CP000943_938(CP000943|pid:none) Methylobacterium sp. 4-46, compl... 107 1e-21
CP001096_1018(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 107 1e-21
AE002098_580(AE002098|pid:none) Neisseria meningitidis MC58, com... 107 1e-21
CP000830_3281(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 107 2e-21
CP000230_2608(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 106 2e-21
CU459003_3736(CU459003|pid:none) Magnetospirillum gryphiswaldens... 106 2e-21
CP000143_2753(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 106 2e-21
CP001154_654(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 106 2e-21
AE016825_3686(AE016825|pid:none) Chromobacterium violaceum ATCC ... 106 3e-21
AM743169_780(AM743169|pid:none) Stenotrophomonas maltophilia K27... 106 3e-21
CP001029_3135(CP001029|pid:none) Methylobacterium populi BJ001, ... 106 3e-21
CP001275_176(CP001275|pid:none) Thermomicrobium roseum DSM 5159,... 106 3e-21
CP000050_3386(CP000050|pid:none) Xanthomonas campestris pv. camp... 106 3e-21
CP001298_3086(CP001298|pid:none) Methylobacterium chloromethanic... 105 4e-21
CP001111_672(CP001111|pid:none) Stenotrophomonas maltophilia R55... 105 4e-21
CP000109_856(CP000109|pid:none) Thiomicrospira crunogena XCL-2, ... 105 4e-21
CP000083_1611(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 105 4e-21
CP000908_2953(CP000908|pid:none) Methylobacterium extorquens PA1... 105 4e-21
CP000084_457(CP000084|pid:none) Candidatus Pelagibacter ubique H... 105 5e-21
CT573073_217(CT573073|pid:none) Kuenenia stuttgartiensis genome ... 105 5e-21
CP000450_1750(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 105 5e-21
CP000633_741(CP000633|pid:none) Agrobacterium vitis S4 chromosom... 105 5e-21
CP000529_1208(CP000529|pid:none) Polaromonas naphthalenivorans C... 105 6e-21
CP000628_903(CP000628|pid:none) Agrobacterium radiobacter K84 ch... 104 8e-21
CP001080_1171(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP... 104 8e-21
AL591688_885(AL591688|pid:none) Sinorhizobium meliloti 1021 comp... 104 8e-21
AM421808_517(AM421808|pid:none) Neisseria meningitidis serogroup... 104 1e-20
CP000542_2052(CP000542|pid:none) Verminephrobacter eiseniae EF01... 104 1e-20
CR522870_2362(CR522870|pid:none) Desulfotalea psychrophila LSv54... 104 1e-20
CP001339_3028(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ... 104 1e-20
CP000943_370(CP000943|pid:none) Methylobacterium sp. 4-46, compl... 103 1e-20
CP001150_2533(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 103 1e-20
CP000661_2764(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 103 1e-20
CP000390_727(CP000390|pid:none) Mesorhizobium sp. BNC1, complete... 103 2e-20
AE013598_3667(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 103 2e-20
CP000285_1892(CP000285|pid:none) Chromohalobacter salexigens DSM... 102 3e-20
CP001147_650(CP001147|pid:none) Thermodesulfovibrio yellowstonii... 102 4e-20
CP001191_564(CP001191|pid:none) Rhizobium leguminosarum bv. trif... 102 4e-20
CP001389_491(CP001389|pid:none) Rhizobium sp. NGR234, complete g... 102 5e-20
CP001074_993(CP001074|pid:none) Rhizobium etli CIAT 652, complet... 101 7e-20
CP000463_1062(CP000463|pid:none) Rhodopseudomonas palustris BisA... 101 7e-20
CP000089_2490(CP000089|pid:none) Dechloromonas aromatica RCB, co... 101 7e-20
(Q20296) RecName: Full=Histone deacetylase 6; EC=3.5.1.... 101 7e-20
CP000031_241(CP000031|pid:none) Ruegeria pomeroyi DSS-3, complet... 101 7e-20
CP000774_778(CP000774|pid:none) Parvibaculum lavamentivorans DS-... 101 9e-20
AL670003_4(AL670003|pid:none) Neurospora crassa DNA linkage grou... 101 9e-20
AM236080_987(AM236080|pid:none) Rhizobium leguminosarum bv. vici... 101 9e-20
AM902716_1907(AM902716|pid:none) Bordetella petrii strain DSM 12... 101 9e-20
CP001622_603(CP001622|pid:none) Rhizobium leguminosarum bv. trif... 101 9e-20
CP000090_2534(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 100 1e-19
BX640447_208(BX640447|pid:none) Bordetella bronchiseptica strain... 100 2e-19
BX640413_274(BX640413|pid:none) Bordetella pertussis strain Toha... 100 2e-19
AM167904_1359(AM167904|pid:none) Bordetella avium 197N complete ... 100 2e-19
BX640432_195(BX640432|pid:none) Bordetella parapertussis strain ... 100 2e-19
CP000352_733(CP000352|pid:none) Ralstonia metallidurans CH34, co... 100 2e-19
BC043813_1(BC043813|pid:none) Xenopus laevis histone deacetylase... 100 2e-19
AE017282_2358(AE017282|pid:none) Methylococcus capsulatus str. B... 100 2e-19
BX571965_2528(BX571965|pid:none) Burkholderia pseudomallei strai... 100 3e-19
CP000555_1246(CP000555|pid:none) Methylibium petroleiphilum PM1,... 100 3e-19
AM746676_6170(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 100 3e-19
CP000686_3108(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 99 4e-19
CP000254_898(CP000254|pid:none) Methanospirillum hungatei JF-1, ... 99 5e-19
CP001052_2932(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 99 5e-19
CP000859_1968(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ... 99 5e-19
AM910994_330(AM910994|pid:none) Plasmodium knowlesi strain H chr... 99 5e-19
CP001230_1844(CP001230|pid:none) Persephonella marina EX-H1, com... 98 8e-19
BC119835_1(BC119835|pid:none) Bos taurus histone deacetylase 10,... 98 8e-19
CP001229_792(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 98 8e-19
CU234118_2041(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 98 8e-19
CR382135_804(CR382135|pid:none) Debaryomyces hansenii chromosome... 98 1e-18
CP000151_984(CP000151|pid:none) Burkholderia sp. 383 chromosome ... 98 1e-18
CP000264_91(CP000264|pid:none) Jannaschia sp. CCS1, complete gen... 98 1e-18
AP005807_6(AP005807|pid:none) Oryza sativa Japonica Group genomi... 97 1e-18
BC044446_1(BC044446|pid:none) Danio rerio zgc:55652, mRNA (cDNA ... 97 1e-18
CP001025_925(CP001025|pid:none) Burkholderia ambifaria MC40-6 ch... 97 1e-18
AP008213_1537(AP008213|pid:none) Oryza sativa (japonica cultivar... 97 1e-18
CP000804_2841(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 97 1e-18
CP000440_929(CP000440|pid:none) Burkholderia ambifaria AMMD chro... 97 1e-18
CP000688_304(CP000688|pid:none) Dehalococcoides sp. BAV1, comple... 97 2e-18
AM747720_2934(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 97 2e-18
CP000378_573(CP000378|pid:none) Burkholderia cenocepacia AU 1054... 97 2e-18
(P72702) RecName: Full=Uncharacterized protein slr0245; &BA0000... 97 2e-18
CP000478_928(CP000478|pid:none) Syntrophobacter fumaroxidans MPO... 96 3e-18
CP001087_2847(CP001087|pid:none) Desulfobacterium autotrophicum ... 96 3e-18
CP000927_3308(CP000927|pid:none) Caulobacter sp. K31, complete g... 96 3e-18
BC092320_1(BC092320|pid:none) Xenopus laevis hypothetical protei... 96 3e-18
BA000040_2653(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 96 4e-18
AY810305_1(AY810305|pid:none) Schistosoma japonicum SJCHGC03352 ... 96 4e-18
CP000570_125(CP000570|pid:none) Burkholderia pseudomallei 668 ch... 96 5e-18
CP000010_105(CP000010|pid:none) Burkholderia mallei ATCC 23344 c... 96 5e-18
CP001408_44(CP001408|pid:none) Burkholderia pseudomallei MSHR346... 96 5e-18
FJ764835_4(FJ764835|pid:none) Drosophila melanogaster strain A82... 95 7e-18
FJ764845_3(FJ764845|pid:none) Drosophila melanogaster strain A38... 95 7e-18
FJ764841_3(FJ764841|pid:none) Drosophila melanogaster strain A18... 95 7e-18
EU254714_1(EU254714|pid:none) Tetrahymena thermophila histone de... 95 7e-18
FJ764855_3(FJ764855|pid:none) Drosophila melanogaster strain E17... 95 7e-18
FJ764835_5(FJ764835|pid:none) Drosophila melanogaster strain A82... 95 7e-18
EU254713_1(EU254713|pid:none) Tetrahymena thermophila histone de... 95 7e-18
FJ764855_4(FJ764855|pid:none) Drosophila melanogaster strain E17... 95 7e-18
FJ764843_4(FJ764843|pid:none) Drosophila melanogaster strain A22... 95 7e-18
FJ764843_5(FJ764843|pid:none) Drosophila melanogaster strain A22... 95 7e-18
FJ764841_5(FJ764841|pid:none) Drosophila melanogaster strain A18... 95 7e-18
AF129433_1(AF129433|pid:none) Drosophila melanogaster histone de... 95 7e-18
FJ764855_5(FJ764855|pid:none) Drosophila melanogaster strain E17... 95 7e-18
CP000572_141(CP000572|pid:none) Burkholderia pseudomallei 1106a ... 95 9e-18
BX571965_110(BX571965|pid:none) Burkholderia pseudomallei strain... 95 9e-18
AL670169_5(AL670169|pid:none) Mouse DNA sequence from clone RP23... 94 1e-17
BC041105_1(BC041105|pid:none) Mus musculus histone deacetylase 6... 94 1e-17
AK154099_1(AK154099|pid:none) Mus musculus NOD-derived CD11c +ve... 94 1e-17
EF676281_1(EF676281|pid:none) Picea sitchensis clone WS02729_N15... 94 1e-17
CP000875_154(CP000875|pid:none) Herpetosiphon aurantiacus ATCC 2... 94 1e-17
CP001399_2103(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 94 1e-17
CP001400_1955(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 94 1e-17
AC002410_2(AC002410|pid:none) Homo sapiens BAC clone CTA-264L19 ... 94 2e-17
AX743241_1(AX743241|pid:none) Sequence 1 from Patent WO03029451.... 94 2e-17
AL022328_11(AL022328|pid:none) Human DNA sequence from clone RP3... 94 2e-17
AF407272_1(AF407272|pid:none) Homo sapiens histone deacetylase 1... 94 2e-17
AF407273_1(AF407273|pid:none) Homo sapiens histone deacetylase 1... 94 2e-17
AK173017_1(AK173017|pid:none) Mus musculus mRNA for mKIAA0744 pr... 94 2e-17
BC111735_1(BC111735|pid:none) Homo sapiens histone deacetylase 9... 94 2e-17
AP009389_2033(AP009389|pid:none) Pelotomaculum thermopropionicum... 94 2e-17
(Q969S8) RecName: Full=Histone deacetylase 10; Short=HD... 94 2e-17
(Q9UKV0) RecName: Full=Histone deacetylase 9; Short=HD9... 94 2e-17
(P83038) RecName: Full=Histone deacetylase 4; Short=HD4... 93 3e-17
(Q9Z2V5) RecName: Full=Histone deacetylase 6; Short=HD6... 93 3e-17
(Q99P99) RecName: Full=Histone deacetylase 4; Short=HD4... 93 3e-17
CP000909_335(CP000909|pid:none) Chloroflexus aurantiacus J-10-fl... 93 3e-17
DQ268531_1(DQ268531|pid:none) Danio rerio histone deacetylase 4 ... 92 4e-17
(Q6NZM9) RecName: Full=Histone deacetylase 4; Short=HD4... 92 4e-17
AK155250_1(AK155250|pid:none) Mus musculus NOD-derived CD11c +ve... 92 4e-17
CP000269_2859(CP000269|pid:none) Janthinobacterium sp. Marseille... 92 4e-17
BC013737_1(BC013737|pid:none) Homo sapiens histone deacetylase 6... 92 6e-17
AK122954_1(AK122954|pid:none) Homo sapiens cDNA FLJ16672 fis, cl... 92 6e-17
AK303012_1(AK303012|pid:none) Homo sapiens cDNA FLJ56624 complet... 92 6e-17
AL137696_1(AL137696|pid:none) Homo sapiens mRNA; cDNA DKFZp566E0... 92 6e-17
AB020708_1(AB020708|pid:none) Homo sapiens mRNA for KIAA0901 pro... 92 6e-17
AK302926_1(AK302926|pid:none) Homo sapiens cDNA FLJ56474 complet... 92 6e-17
CP000587_108(CP000587|pid:none) Ostreococcus lucimarinus CCE9901... 92 6e-17
CP000271_1482(CP000271|pid:none) Burkholderia xenovorans LB400 c... 92 6e-17
A70481(A70481) acetoin utilization protein - Aquifex aeolicus &... 92 6e-17
CP000113_5759(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 92 6e-17
AK024083_1(AK024083|pid:none) Homo sapiens cDNA FLJ14021 fis, cl... 92 6e-17
AF132609_1(AF132609|pid:none) Homo sapiens histone deacetylase 6... 92 6e-17
AF174499_1(AF174499|pid:none) Homo sapiens GR AF-1 specific hist... 92 6e-17
BC069243_1(BC069243|pid:none) Homo sapiens histone deacetylase 6... 92 6e-17
AK127118_1(AK127118|pid:none) Homo sapiens cDNA FLJ45175 fis, cl... 92 6e-17
(Q9UBN7) RecName: Full=Histone deacetylase 6; Short=HD6... 92 6e-17
CP000806_3708(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 92 6e-17
AP008213_289(AP008213|pid:none) Oryza sativa (japonica cultivar-... 92 7e-17
CP000504_375(CP000504|pid:none) Pyrobaculum islandicum DSM 4184,... 92 7e-17
FM992695_178(FM992695|pid:none) Candida dubliniensis CD36 chromo... 92 7e-17
CP001337_3474(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 91 1e-16
CP001291_3453(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 91 1e-16
AE008384_67(AE008384|pid:none) Methanosarcina mazei strain Goe1,... 91 1e-16
EU348774_1(EU348774|pid:none) Hordeum vulgare cultivar Caresse h... 91 1e-16
CP000497_123(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 91 1e-16
CP001068_773(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 91 1e-16
AE017343_75(AE017343|pid:none) Cryptococcus neoformans var. neof... 91 1e-16
CP000660_1294(CP000660|pid:none) Pyrobaculum arsenaticum DSM 135... 91 1e-16
CP000117_4415(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 91 1e-16
BA000023_2494(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 91 1e-16
DQ976711_5(DQ976711|pid:none) Hylobates klossii HDAC9 (HDAC9) ge... 91 2e-16
CP001340_2151(CP001340|pid:none) Caulobacter crescentus NA1000, ... 90 2e-16
AE005673_2055(AE005673|pid:none) Caulobacter crescentus CB15, co... 90 2e-16
BC115262_1(BC115262|pid:none) Danio rerio histone deacetylase 6,... 90 2e-16
GM754358_1(GM754358|pid:none) Sequence 51 from Patent WO20081168... 90 3e-16
AF026202_1(AF026202|pid:none) Caenorhabditis elegans cosmid C10E... 90 3e-16
AL646052_920(AL646052|pid:none) Ralstonia solanacearum GMI1000 c... 90 3e-16
AY086135_1(AY086135|pid:none) Arabidopsis thaliana clone 21721 m... 90 3e-16
AF527614_1(AF527614|pid:none) Zea mays histone deacetylase HDA11... 89 4e-16
AF527612_1(AF527612|pid:none) Zea mays histone deacetylase HDA11... 89 4e-16
AF527611_1(AF527611|pid:none) Zea mays histone deacetylase HDA11... 89 4e-16
AJ851468_1(AJ851468|pid:none) Gallus gallus mRNA for hypothetica... 89 4e-16
AM426737_2(AM426737|pid:none) Vitis vinifera contig VV78X235961.... 89 4e-16
CR382131_1026(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 89 4e-16
(Q57955) RecName: Full=Uncharacterized protein MJ0535; &G64366(... 89 4e-16
CP001325_44(CP001325|pid:none) Micromonas sp. RCC299 chromosome ... 89 4e-16
CP001398_430(CP001398|pid:none) Thermococcus gammatolerans EJ3, ... 89 4e-16
(Q5R902) RecName: Full=Histone deacetylase 5; Short=HD5... 89 5e-16
AC017028_1(AC017028|pid:none) Homo sapiens BAC clone RP11-275G7 ... 89 5e-16
CR940352_547(CR940352|pid:none) Theileria annulata strain Ankara... 89 5e-16
(Q9UQL6) RecName: Full=Histone deacetylase 5; Short=HD5... 89 5e-16
AB006626_1(AB006626|pid:none) Homo sapiens mRNA for KIAA0288 pro... 89 5e-16
BC039904_1(BC039904|pid:none) Homo sapiens histone deacetylase 4... 89 5e-16
AB011172_1(AB011172|pid:none) Homo sapiens mRNA for KIAA0600 pro... 89 5e-16
AB463070_1(AB463070|pid:none) Synthetic construct DNA, clone: pF... 89 5e-16
CP000453_2031(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-... 89 6e-16
CP001326_451(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 89 6e-16
AE009950_818(AE009950|pid:none) Pyrococcus furiosus DSM 3638, co... 89 6e-16
CP000448_932(CP000448|pid:none) Syntrophomonas wolfei subsp. wol... 88 8e-16
BA000002_60(BA000002|pid:none) Aeropyrum pernix K1 DNA, complete... 88 8e-16
(Q613L4) RecName: Full=Histone deacetylase 4; EC=3.5.1.... 88 1e-15
CR940352_752(CR940352|pid:none) Theileria annulata strain Ankara... 88 1e-15
AK155335_1(AK155335|pid:none) Mus musculus NOD-derived CD11c +ve... 87 1e-15
CP000283_1274(CP000283|pid:none) Rhodopseudomonas palustris BisB... 87 1e-15
CU928173_73(CU928173|pid:none) Zygosaccharomyces rouxii strain C... 87 1e-15
AE009441_2093(AE009441|pid:none) Pyrobaculum aerophilum str. IM2... 87 1e-15
AE010300_915(AE010300|pid:none) Leptospira interrogans serovar l... 87 2e-15
AE004437_112(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 87 2e-15
CP000077_943(CP000077|pid:none) Sulfolobus acidocaldarius DSM 63... 87 2e-15
(Q80ZH1) RecName: Full=Histone deacetylase 5; Short=HD5... 87 2e-15
G72762(G72762)probable acetylpolyamine aminohydrolase APE0092 - ... 87 2e-15
AL954730_8(AL954730|pid:none) Mouse DNA sequence from clone RP23... 87 2e-15
AK095820_1(AK095820|pid:none) Homo sapiens cDNA FLJ38501 fis, cl... 87 2e-15
CP000076_3314(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 87 2e-15
AK146483_1(AK146483|pid:none) Mus musculus 16 days embryo heart ... 87 2e-15
AF207748_1(AF207748|pid:none) Mus musculus histone deacetylase 5... 87 2e-15
AL954730_7(AL954730|pid:none) Mouse DNA sequence from clone RP23... 87 2e-15
AE016823_2647(AE016823|pid:none) Leptospira interrogans serovar ... 87 2e-15
CP000440_1911(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 87 2e-15
(Q9Z2V6) RecName: Full=Histone deacetylase 5; Short=HD5... 87 2e-15
CP001634_21(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, com... 87 2e-15
AJ248286_209(AJ248286|pid:none) Pyrococcus abyssi complete genom... 87 2e-15
AB179019_1(AB179019|pid:none) Macaca fascicularis testis cDNA cl... 86 3e-15
CP000612_1855(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 86 3e-15
CP000561_1111(CP000561|pid:none) Pyrobaculum calidifontis JCM 11... 86 3e-15
CP000032_95(CP000032|pid:none) Ruegeria pomeroyi DSS-3 plasmid m... 86 4e-15
(Q941D6) RecName: Full=Histone deacetylase 14; EC=3.5.1... 86 4e-15
CP000679_2010(CP000679|pid:none) Caldicellulosiruptor saccharoly... 86 5e-15
(Q70I53) RecName: Full=Histone deacetylase-like amidohydrolase; ... 86 5e-15
CP000251_3427(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 86 5e-15
DQ656604_1(DQ656604|pid:none) Triticum aestivum histone deacetyl... 86 5e-15
CP001275_1492(CP001275|pid:none) Thermomicrobium roseum DSM 5159... 85 7e-15
AY596297_2038(AY596297|pid:none) Haloarcula marismortui ATCC 430... 85 7e-15
AP009552_4002(AP009552|pid:none) Microcystis aeruginosa NIES-843... 85 7e-15
AK072557_1(AK072557|pid:none) Oryza sativa Japonica Group cDNA c... 85 7e-15
CP001393_966(CP001393|pid:none) Anaerocellum thermophilum DSM 67... 85 9e-15
CR380956_136(CR380956|pid:none) Candida glabrata strain CBS138 c... 85 9e-15
AM494970_94(AM494970|pid:none) Leishmania braziliensis chromosom... 85 9e-15
CP001131_3490(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 85 9e-15
AY714829_37(AY714829|pid:none) Uncultured archaeon GZfos19A5 clo... 85 9e-15
CP000647_519(CP000647|pid:none) Klebsiella pneumoniae subsp. pne... 84 1e-14
AB200269_3(AB200269|pid:none) Klebsiella aerogenes monoamine-reg... 84 1e-14
CP001037_3757(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 84 1e-14
AL035678_23(AL035678|pid:none) Arabidopsis thaliana DNA chromoso... 84 1e-14
AE016817_185(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 84 1e-14
CP000562_592(CP000562|pid:none) Methanoculleus marisnigri JR1, c... 84 2e-14
AK295884_1(AK295884|pid:none) Homo sapiens cDNA FLJ54798 complet... 84 2e-14
CP001130_851(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, co... 84 2e-14
CP000151_2043(CP000151|pid:none) Burkholderia sp. 383 chromosome... 84 2e-14
CP000477_1377(CP000477|pid:none) Methanosaeta thermophila PT, co... 84 2e-14
AF307341_1(AF307341|pid:none) Cochliobolus carbonum putative his... 84 2e-14
BC086431_1(BC086431|pid:none) Rattus norvegicus histone deacetyl... 83 3e-14
AE010299_2811(AE010299|pid:none) Methanosarcina acetivorans str.... 83 3e-14
CP000546_3262(CP000546|pid:none) Burkholderia mallei NCTC 10229 ... 83 3e-14
CP000010_1260(CP000010|pid:none) Burkholderia mallei ATCC 23344 ... 83 3e-14
CP000548_1210(CP000548|pid:none) Burkholderia mallei NCTC 10247 ... 83 3e-14
BX571965_1413(BX571965|pid:none) Burkholderia pseudomallei strai... 83 3e-14
CP000572_2350(CP000572|pid:none) Burkholderia pseudomallei 1106a... 83 3e-14
CP000141_263(CP000141|pid:none) Carboxydothermus hydrogenoforman... 82 4e-14
AK301545_1(AK301545|pid:none) Homo sapiens cDNA FLJ59774 complet... 82 6e-14
AM502226_119(AM502226|pid:none) Leishmania infantum chromosome 8. 82 6e-14
Z50070_5(Z50070|pid:none) Caenorhabditis elegans Cosmid F43G6, c... 82 6e-14
BT009771_1(BT009771|pid:none) Homo sapiens histone deacetylase 7... 82 6e-14
CP000086_2074(CP000086|pid:none) Burkholderia thailandensis E264... 82 6e-14
BC006453_1(BC006453|pid:none) Homo sapiens histone deacetylase 7... 82 6e-14
AK122588_1(AK122588|pid:none) Homo sapiens mRNA for FLJ00413 pro... 82 6e-14
AK128383_1(AK128383|pid:none) Homo sapiens cDNA FLJ46526 fis, cl... 82 6e-14
AL117455_1(AL117455|pid:none) Homo sapiens mRNA; cDNA DKFZp586J0... 82 6e-14
BC020505_1(BC020505|pid:none) Homo sapiens histone deacetylase 7... 82 6e-14
AM920436_1457(AM920436|pid:none) Penicillium chrysogenum Wiscons... 82 6e-14
BX571866_295(BX571866|pid:none) Photorhabdus luminescens subsp. ... 82 6e-14
(Q9UFU7) RecName: Full=Histone deacetylase 7; Short=HD7... 82 6e-14
CR954209_17(CR954209|pid:none) Ostreococcus tauri strain OTTH059... 82 8e-14
AB006696_7(AB006696|pid:none) Arabidopsis thaliana genomic DNA, ... 82 8e-14
AF537125_1(AF537125|pid:none) Emericella nidulans putative HOS3-... 82 8e-14
(Q8RX28) RecName: Full=Histone deacetylase 5; EC=3.5.1.... 82 8e-14
AY741199_29(AY741199|pid:none) Uncultured archaeon GZfos26D8 clo... 82 8e-14
AM747720_1999(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 81 1e-13
AP009385_1870(AP009385|pid:none) Burkholderia multivorans ATCC 1... 81 1e-13
AK024469_1(AK024469|pid:none) Homo sapiens mRNA for FLJ00062 pro... 81 1e-13
AY714871_7(AY714871|pid:none) Uncultured archaeon GZfos9D1 clone... 81 1e-13
DQ976666_6(DQ976666|pid:none) Ateles geoffroyi HDAC9 (HDAC9) gen... 81 1e-13
AP007172_53(AP007172|pid:none) Aspergillus oryzae RIB40 genomic ... 81 1e-13
CR382126_33(CR382126|pid:none) Kluyveromyces lactis strain NRRL ... 81 1e-13
(Q8C2B3) RecName: Full=Histone deacetylase 7; Short=HD7... 81 1e-13
AF207749_1(AF207749|pid:none) Mus musculus histone deacetylase 7... 81 1e-13
AK036586_1(AK036586|pid:none) Mus musculus adult male bone cDNA,... 81 1e-13
CP000100_2122(CP000100|pid:none) Synechococcus elongatus PCC 794... 81 1e-13
AK044287_1(AK044287|pid:none) Mus musculus adult retina cDNA, RI... 81 1e-13
CP001344_566(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 81 1e-13
CP001322_2991(CP001322|pid:none) Desulfatibacillum alkenivorans ... 81 1e-13
AK146315_1(AK146315|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 81 1e-13
CP001287_1300(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 81 1e-13
CP000380_659(CP000380|pid:none) Burkholderia cenocepacia AU 1054... 80 2e-13
CU633897_198(CU633897|pid:none) Podospora anserina genomic DNA c... 80 2e-13
AM114193_1727(AM114193|pid:none) Uncultured methanogenic archaeo... 80 2e-13
(P56523) RecName: Full=Histone deacetylase clr3; EC=3.5... 80 2e-13
AP009389_1341(AP009389|pid:none) Pelotomaculum thermopropionicum... 80 2e-13
AP006618_2050(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 80 2e-13
(O27262) RecName: Full=Uncharacterized protein MTH_1194; &AE000... 80 2e-13
CP000555_2648(CP000555|pid:none) Methylibium petroleiphilum PM1,... 80 2e-13
BA000045_1275(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 80 2e-13
(Q02959) RecName: Full=Histone deacetylase HOS3; EC=3.5... 80 2e-13
AP008231_1968(AP008231|pid:none) Synechococcus elongatus PCC 630... 79 4e-13
CP000362_1097(CP000362|pid:none) Roseobacter denitrificans OCh 1... 79 4e-13
AM180252_619(AM180252|pid:none) Lawsonia intracellularis PHE/MN1... 79 4e-13
AB260935_29(AB260935|pid:none) Uncultured bacterium DNA, salt-st... 79 4e-13
CP001649_3419(CP001649|pid:none) Desulfovibrio salexigens DSM 26... 79 5e-13
AF306859_1(AF306859|pid:none) Emericella nidulans putative histo... 79 5e-13
AE016817_136(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 79 6e-13
CP000744_1330(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 78 8e-13
CU207211_810(CU207211|pid:none) Herminiimonas arsenicoxydans chr... 78 8e-13
CP000589_20(CP000589|pid:none) Ostreococcus lucimarinus CCE9901 ... 78 1e-12
CP000927_550(CP000927|pid:none) Caulobacter sp. K31, complete ge... 78 1e-12
CP000031_3125(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 78 1e-12
CP000269_843(CP000269|pid:none) Janthinobacterium sp. Marseille,... 78 1e-12
CP000699_3221(CP000699|pid:none) Sphingomonas wittichii RW1, com... 78 1e-12
AE014185_76(AE014185|pid:none) Plasmodium falciparum 3D7 chromos... 78 1e-12
AE008691_1040(AE008691|pid:none) Thermoanaerobacter tengcongensi... 78 1e-12
AC006932_14(AC006932|pid:none) Genomic sequence for Arabidopsis ... 77 1e-12
CU928178_456(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 77 1e-12
(Q94EJ2) RecName: Full=Histone deacetylase 8; EC=3.5.1.... 77 1e-12
AE004091_3773(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 77 1e-12
FM209186_1200(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 77 1e-12
CU928168_395(CU928168|pid:none) Kluyveromyces thermotolerans str... 77 1e-12
CP000812_337(CP000812|pid:none) Thermotoga lettingae TMO, comple... 77 1e-12
AF239243_1(AF239243|pid:none) Homo sapiens histone deacetylase 7... 77 2e-12
CP000453_1014(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-... 77 2e-12
(O30107) RecName: Full=Uncharacterized protein AF_0130; &AE0007... 77 2e-12
AE017199_523(AE017199|pid:none) Nanoarchaeum equitans Kin4-M, co... 77 2e-12
AF537126_1(AF537126|pid:none) Cochliobolus carbonum putative HOS... 77 2e-12
AE014298_1957(AE014298|pid:none) Drosophila melanogaster chromos... 76 3e-12
CP000575_1173(CP000575|pid:none) Staphylothermus marinus F1, com... 76 3e-12
BT014921_1(BT014921|pid:none) Drosophila melanogaster GH10588 fu... 76 3e-12
AE014298_1958(AE014298|pid:none) Drosophila melanogaster chromos... 76 3e-12
AF538714_1(AF538714|pid:none) Drosophila melanogaster histone de... 76 3e-12
DQ923591_5(DQ923591|pid:none) Monascus purpureus clone pMGPD28 p... 76 3e-12
DQ118404_38(DQ118404|pid:none) Uncultured euryarchaeote Alv-FOS4... 76 3e-12
CP000239_555(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, comp... 76 3e-12
AF538713_1(AF538713|pid:none) Drosophila melanogaster histone de... 76 3e-12
CP000816_1192(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, c... 76 4e-12
CP000143_2412(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 75 5e-12
CP000661_372(CP000661|pid:none) Rhodobacter sphaeroides ATCC 170... 75 7e-12
CP000577_2441(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 75 9e-12
CP000943_646(CP000943|pid:none) Methylobacterium sp. 4-46, compl... 74 1e-11
CP001336_2689(CP001336|pid:none) Desulfitobacterium hafniense DC... 74 1e-11
CP000699_4316(CP000699|pid:none) Sphingomonas wittichii RW1, com... 74 1e-11
AP008230_1590(AP008230|pid:none) Desulfitobacterium hafniense Y5... 74 1e-11
CP000478_4020(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 74 1e-11
AL032644_8(AL032644|pid:none) Caenorhabditis elegans YAC Y51H1A,... 74 2e-11
F88359(F88359)protein Y51H1A.5 [imported] - Caenorhabditis elegans 74 2e-11
AP010904_4573(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 74 2e-11
CP001365_109(CP001365|pid:none) Halorubrum lacusprofundi ATCC 49... 74 2e-11
BA000002_858(BA000002|pid:none) Aeropyrum pernix K1 DNA, complet... 74 2e-11
CP000252_1925(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 74 2e-11
F72602(F72602)probable acetylpolyamine aminohydrolase APE1285 - ... 74 2e-11
AC104488_17(AC104488|pid:none) Trypanosoma brucei chromosome 5 c... 74 2e-11
AC147462_2(AC147462|pid:none) Oryza sativa (japonica cultivar-gr... 74 2e-11
CP001358_126(CP001358|pid:none) Desulfovibrio desulfuricans subs... 73 3e-11
BA000040_2234(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 73 3e-11
CR936257_159(CR936257|pid:none) Natronomonas pharaonis DSM 2160 ... 73 4e-11
CP000539_2050(CP000539|pid:none) Acidovorax sp. JS42, complete g... 72 5e-11
CP001366_159(CP001366|pid:none) Halorubrum lacusprofundi ATCC 49... 72 8e-11
CP000859_3156(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ... 72 8e-11
CR382139_805(CR382139|pid:none) Debaryomyces hansenii strain CBS... 72 8e-11
CP000512_2407(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 72 8e-11
CP000514_3609(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 71 1e-10
CP000686_3716(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 71 1e-10
CP000152_2941(CP000152|pid:none) Burkholderia sp. 383 chromosome... 71 1e-10
CP000112_2333(CP000112|pid:none) Desulfovibrio desulfuricans G20... 71 1e-10
CP000316_413(CP000316|pid:none) Polaromonas sp. JS666, complete ... 71 1e-10
AM747721_182(AM747721|pid:none) Burkholderia cenocepacia J2315 c... 70 2e-10
FN357524_9(FN357524|pid:none) Schistosoma mansoni genome sequenc... 70 2e-10
BX640437_199(BX640437|pid:none) Bordetella bronchiseptica strain... 70 2e-10
BA000012_77(BA000012|pid:none) Mesorhizobium loti MAFF303099 DNA... 70 2e-10
CP000771_769(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 70 2e-10
AM180088_451(AM180088|pid:none) Haloquadratum walsbyi DSM 16790 ... 69 5e-10
BT043428_1(BT043428|pid:none) Zea mays full-length cDNA clone ZM... 69 5e-10
GM754348_1(GM754348|pid:none) Sequence 41 from Patent WO20081168... 69 5e-10
AM436195_1(AM436195|pid:none) Vitis vinifera contig VV78X263046.... 69 5e-10
CP000085_1159(CP000085|pid:none) Burkholderia thailandensis E264... 68 9e-10
CP001026_150(CP001026|pid:none) Burkholderia ambifaria MC40-6 ch... 68 9e-10
CP000076_6052(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 68 9e-10
AM260480_2044(AM260480|pid:none) Ralstonia eutropha H16 chromoso... 68 9e-10
AM181176_3302(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 68 9e-10
AM747720_1222(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 68 1e-09
CP000744_3888(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 68 1e-09
CP000094_5625(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 68 1e-09
CP000926_2020(CP000926|pid:none) Pseudomonas putida GB-1, comple... 68 1e-09
CP000958_1220(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ... 68 1e-09
CP000316_417(CP000316|pid:none) Polaromonas sp. JS666, complete ... 67 1e-09
CP000378_767(CP000378|pid:none) Burkholderia cenocepacia AU 1054... 67 1e-09
CP001349_1444(CP001349|pid:none) Methylobacterium nodulans ORS 2... 67 1e-09
CP000077_202(CP000077|pid:none) Sulfolobus acidocaldarius DSM 63... 67 1e-09
AP009385_1159(AP009385|pid:none) Burkholderia multivorans ATCC 1... 67 1e-09
CP000804_1039(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 67 2e-09
CP000926_5354(CP000926|pid:none) Pseudomonas putida GB-1, comple... 67 2e-09
AY659147_1(AY659147|pid:none) Synthetic construct Peudomonas aer... 67 2e-09
CP000438_3687(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 67 2e-09
FM209186_4004(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 67 2e-09
AE004091_1411(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 67 2e-09
CP000076_4082(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 67 3e-09
CP000076_3590(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 67 3e-09
CP000926_2184(CP000926|pid:none) Pseudomonas putida GB-1, comple... 66 3e-09
CU234118_1477(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 66 3e-09
CP001635_4634(CP001635|pid:none) Variovorax paradoxus S110 chrom... 66 3e-09
AM486630_1(AM486630|pid:none) Vitis vinifera contig VV78X257944.... 66 3e-09
CP000031_1963(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 66 3e-09
CP000570_1142(CP000570|pid:none) Burkholderia pseudomallei 668 c... 66 4e-09
BX571965_1089(BX571965|pid:none) Burkholderia pseudomallei strai... 66 4e-09
AK154045_1(AK154045|pid:none) Mus musculus 2 days neonate thymus... 66 4e-09
CP000440_1128(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 65 6e-09
FN357357_18(FN357357|pid:none) Schistosoma mansoni genome sequen... 65 6e-09
CP000614_1193(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 65 6e-09
CP000712_5190(CP000712|pid:none) Pseudomonas putida F1, complete... 65 6e-09
CP001622_4451(CP001622|pid:none) Rhizobium leguminosarum bv. tri... 65 1e-08
CP000744_413(CP000744|pid:none) Pseudomonas aeruginosa PA7, comp... 65 1e-08
CP001154_1965(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 65 1e-08
CP000144_539(CP000144|pid:none) Rhodobacter sphaeroides 2.4.1 ch... 65 1e-08
CP001151_594(CP001151|pid:none) Rhodobacter sphaeroides KD131 ch... 65 1e-08
CP000010_1922(CP000010|pid:none) Burkholderia mallei ATCC 23344 ... 65 1e-08
CP001034_979(CP001034|pid:none) Natranaerobius thermophilus JW/N... 65 1e-08
EU332940_1(EU332940|pid:none) Picea abies histone deacetylase su... 64 1e-08
CP001399_2082(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 64 1e-08
BX571966_1274(BX571966|pid:none) Burkholderia pseudomallei strai... 64 1e-08
CT573326_5102(CT573326|pid:none) Pseudomonas entomophila str. L4... 64 1e-08
CP000571_1757(CP000571|pid:none) Burkholderia pseudomallei 668 c... 64 1e-08
CP001140_980(CP001140|pid:none) Desulfurococcus kamchatkensis 12... 64 2e-08
CP001191_4216(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 64 2e-08
AM902716_3096(AM902716|pid:none) Bordetella petrii strain DSM 12... 64 2e-08
CR382127_663(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 64 2e-08
CP000153_1805(CP000153|pid:none) Sulfurimonas denitrificans DSM ... 63 3e-08
CU207366_3054(CU207366|pid:none) Gramella forsetii KT0803 comple... 63 3e-08
CP000949_133(CP000949|pid:none) Pseudomonas putida W619, complet... 63 3e-08
CP000230_1172(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 63 4e-08
CP000505_565(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 63 4e-08
CP000655_1521(CP000655|pid:none) Polynucleobacter necessarius su... 62 5e-08
AE006641_28(AE006641|pid:none) Sulfolobus solfataricus P2, compl... 62 6e-08
CP000352_1618(CP000352|pid:none) Ralstonia metallidurans CH34, c... 62 6e-08
AM260479_1366(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 62 8e-08
CP000661_2815(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 62 8e-08
BX640442_239(BX640442|pid:none) Bordetella bronchiseptica strain... 61 1e-07
CP000909_3364(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 61 1e-07
BC161282_1(BC161282|pid:none) Xenopus tropicalis hypothetical pr... 61 1e-07
CP000089_2354(CP000089|pid:none) Dechloromonas aromatica RCB, co... 61 1e-07
AE004091_322(AE004091|pid:none) Pseudomonas aeruginosa PAO1, com... 61 1e-07
BC073234_1(BC073234|pid:none) Xenopus laevis MGC80565 protein, m... 61 1e-07
AY714849_24(AY714849|pid:none) Uncultured archaeon GZfos28B8 clo... 61 1e-07
CP000086_940(CP000086|pid:none) Burkholderia thailandensis E264 ... 60 2e-07
CP000682_531(CP000682|pid:none) Metallosphaera sedula DSM 5348, ... 60 2e-07
BA000023_2475(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 60 2e-07
CP000514_3795(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 60 3e-07
CP001389_3527(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 59 4e-07
CP001332_228(CP001332|pid:none) Micromonas sp. RCC299 chromosome... 59 4e-07
CU633749_1386(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 59 4e-07
CP001001_1580(CP001001|pid:none) Methylobacterium radiotolerans ... 59 5e-07
FM954972_855(FM954972|pid:none) Vibrio splendidus LGP32 chromoso... 59 5e-07
AK001032_1(AK001032|pid:none) Homo sapiens cDNA FLJ10170 fis, cl... 59 5e-07
CP000686_1533(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 59 5e-07
BX640417_318(BX640417|pid:none) Bordetella pertussis strain Toha... 58 9e-07
AE000782_2263(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304... 57 2e-06
CP001013_1982(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 57 2e-06
CP000477_451(CP000477|pid:none) Methanosaeta thermophila PT, com... 57 2e-06
CP000555_1507(CP000555|pid:none) Methylibium petroleiphilum PM1,... 57 2e-06
CP000968_715(CP000968|pid:none) Candidatus Korarchaeum cryptofil... 57 2e-06
CP000473_1067(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 57 2e-06
CP000816_111(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, co... 57 3e-06
AE003852_2012(AE003852|pid:none) Vibrio cholerae O1 biovar eltor... 56 4e-06
AK034511_1(AK034511|pid:none) Mus musculus adult male diencephal... 55 6e-06
(Q8VH37) RecName: Full=Histone deacetylase 8; Short=HD8... 55 6e-06
BC120257_1(BC120257|pid:none) Bos taurus histone deacetylase 8, ... 55 6e-06
(Q12214) RecName: Full=Histone deacetylase HOS1; EC=3.5... 55 6e-06
AM502226_99(AM502226|pid:none) Leishmania infantum chromosome 8. 55 8e-06
CP001281_2304(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 55 1e-05
CP000764_3178(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 55 1e-05
CP001644_1584(CP001644|pid:none) Ralstonia pickettii 12D chromos... 55 1e-05
CP000817_4014(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 54 1e-05
EU446822_1(EU446822|pid:none) Synthetic construct Homo sapiens c... 54 2e-05
AF245664_1(AF245664|pid:none) Homo sapiens histone deacetylase 8... 54 2e-05
>(Q54X15) RecName: Full=Type-2 histone deacetylase 1;
EC=3.5.1.98;
Length = 1489
Score = 445 bits (1145), Expect = e-123
Identities = 222/257 (86%), Positives = 222/257 (86%)
Frame = +1
Query: 1 DHPESPKRLSSVIKAINDFSRQSDRLIIKNDPEEINDKWILTVHSPEYLRLLEDLTEKLD 180
DHPESPKRLSSVIKAINDFSRQSDRLIIKNDPEEINDKWILTVHSPEYLRLLEDLTEKLD
Sbjct: 1077 DHPESPKRLSSVIKAINDFSRQSDRLIIKNDPEEINDKWILTVHSPEYLRLLEDLTEKLD 1136
Query: 181 ANEIRPLNVNNDGASTGINQFXXXXXXXXXXXXXXXXXXXXXXXNGEQCEDGDTFVSKLS 360
ANEIRPLNVNNDGASTGINQF NGEQCEDGDTFVSKLS
Sbjct: 1137 ANEIRPLNVNNDGASTGINQFSTSTPITTTGTATVTPGSTTSSTNGEQCEDGDTFVSKLS 1196
Query: 361 LHAAKRSAGATCQAIDNVMKGNVTSAFVAARPPGHHAGRDGLTSGTSSQGFCLLNHVCIG 540
LHAAKRSAGATCQAIDNVMKGNVTSAFVAARPPGHHAGRDGLTSGTSSQGFCLLNHVCIG
Sbjct: 1197 LHAAKRSAGATCQAIDNVMKGNVTSAFVAARPPGHHAGRDGLTSGTSSQGFCLLNHVCIG 1256
Query: 541 AKYAQLKYNLDKIAIIDFDVHHGNGTEEILSNDQGFYFLSIHMFEEGFYPXXXXXXXXXX 720
AKYAQLKYNLDKIAIIDFDVHHGNGTEEILSNDQGFYFLSIHMFEEGFYP
Sbjct: 1257 AKYAQLKYNLDKIAIIDFDVHHGNGTEEILSNDQGFYFLSIHMFEEGFYPGSGGGVGSIG 1316
Query: 721 XXNLNEFNEQNDYDDDD 771
NLNEFNEQNDYDDDD
Sbjct: 1317 VVNLNEFNEQNDYDDDD 1333
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 2,010,405,521
Number of extensions: 36205437
Number of successful extensions: 99960
Number of sequences better than 10.0: 827
Number of HSP's gapped: 99250
Number of HSP's successfully gapped: 871
Length of query: 551
Length of database: 1,061,185,681
Length adjustment: 134
Effective length of query: 417
Effective length of database: 623,213,649
Effective search space: 259880091633
Effective search space used: 259880091633
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
3 |
| VH (FL, L) |
6 |
| VF (FL, S) |
1 |
| AH (FL, L) |
4 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
5 |
| SS (DIR, S) |
12 |
| SH (FL, L) |
2 |
| SF (FL, S) |
2 |
| CH (FL, L) |
7 |
| CF (FL, S) |
1 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |