Contig-U16302-1
Contig ID Contig-U16302-1
Contig update 2004. 6.11
Contig sequence
>Contig-U16302-1 (Contig-U16302-1Q) /CSM_Contig/Contig-U16302-1Q.Seq.d
AAAACATCATGAAAGACTATTATATATTGATATTGATATTCATCATGGTG
ATGGTGTTGAAGACGCATTTTATACAACAGATAGAGTTATGACAGTATCA
TTTCATAAGTATGGTGATTATTTCCCAGGTACAGGAGATGTTAAAGATAT
TGGAGCGGATAAAGGTAAATATTATTCATTGAATTTCCCATTGAAAGATG
GTATAGATGATGAATCTTATCAAAGTATCTTTAGACCAATCATTAGATCG
GTAATGGATTTCTATAGACCAGGTGCAGTGGTTATTCAATGTGGTGCAGA
TTCATTGACAGGTGATAGATTAGGTTGTTTCAATTTAACATTGAGAGGTC
ACGCTCCAATGTATCGAATTTTTAAAGTCATTCAATGTACCATTGGTTGT
ATTGGGTGGTGGTGGTTATACTATTAAAAATGTTGCACGTTGTTGGACTT
ATGAAACTTCGATTTTGGTGGATTCAGAATTAAAGGATGAATTGCCCTAC
AATGATTATTTAGAATATTATGGTCCAGAATATAGATTACATATCACTCC
AAACAATATGGAGAATCAAAACACAAAAGATTACTTGGAGAAATTAAAAA
TTCAACTCTTGGAAAATCTTAGAAATTTAAATCATGCTCCAGCTGCCGCT
CATCATGATATACCACCTGATTCTTTTAATTATTCTGATGACGAAGATGA
TGAAGATCCTGATGTTAGAATCTCTGAAGCTGATCGTGATAAAAAGGTAC
ATCATCAAGGTGAATTATCTGATTCTGATGAAGAAGATGGTAGAAGAAAT
TATAGTAATGGTTTAGAAGCTACTTCAACCTCAAGAAGAAATCAAGTTTC
AATTTCTGCTTATGATAAAGAAAGACCATCTTATAATAGTAGAAATAATA
ATAATAATAACAATAATAATAATATAATAATAATAATAATAATAATAATA
GTAATAATAATAATAATAACAATAGTAGTATTTCAATATCATTAGTTGAA
ATTTCAAGTGGTAGTAAAGAAAGAAATGATAGAGATTCGCCAAGTAGACA
ATTATTTGTTTCAAATGATGGTAATACATTAAATACAAATAAAGAGAGAT
CAAAATCAAAATCAATAGATTTAGAAAAACCAGAAATTTTAATAAATAAT
AAGAAAAAAGAGAGTATAAATTTGGAAACGATAAAATTAATTGAAACTAT
TAAAGGATATCATGTTACAAGTCATTTATGTATTTGTGATAATTTATTAT
TTACAGGATGTTCAGATAATTCAATTAGAGTGTATGATTATAAGAGTCAA
AATATGGAATGTGTTCAAACCTTGAAAGGTCATGAAGGTCCAGTTGAATC
AATTTGTTATAATGATCAATATTTGTTTAGTGGTTCATCAGATCATTCAA
TTAAAGTTTGGGATTTAAAGAAATTAAGATGTATTTTTACTTTGGAGGGT
CATGATAAACCTGTCCATACGGTTCTATTGAATGATAAATATTTGTTTAG
TGGTTCCTCTGACAAAACTATCAAAGTTTGGGATTTGAAAACTTTGGAAT
GTAAATATACCCTTGAAAGTCATGCCAGAGCCGTCAAAACACTTTGTATA
TCTGGTCAATATTTATTTAGTGGTTCAAATGATAAAACTATCAAGGTTTG
GGATTTGAAAACTTTTCGTTGTAACTACACTCTAAAAGGTCATACTAAAT
GGGTCACCACTATCTGTATATTAGGTACCAATCTCTACAGTGGCTCCTAT
GATAAAACTATAAGAGTTTGGAATTTAAAGAGTTTAGAATGTTCCGCTAC
TTTAAGAGGCCATGATAGATGGGTTGAACATATGGTAATTTGTGATAAAT
TATTATTTACTGCTAGTGACGATAATACAATTAAAATTTGGGATTTAGAA
ACATTAAGATGTAATACAACTTTGGAAGGACATAATGCAACCGTTCAATG
TTTAGCAGTTTGGGAAGATAAAAAATGTGTTATTAGTTGTAGTCATGATC
AAAGTATTAGAGTTTGGGGTTGGAATTAATTTAAAATAAAAAAAAAAAAC
ATTAAGAACAAAAAAAATATAATCATATAAATCTAAAAAAAGAAAAAAAA
AAAAAAG

Gap no gap
Contig length 2107
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 1312332
End point 1310795
Strand (PLUS/MINUS) MINUS
Number of clones 7
Number of EST 9
Link to clone list U16302
List of clone(s)

est1=FC-BE07F,1,663
est2=AFK448Z,273,986
est3=AFL196F,777,1335
est4=SSF701Z,1256,1873
est5=SSC410Z,1259,2107
est6=SSF701F,1461,2096
est7=AFL196Z,1488,1863
est8=VSE690E,1635,2092
est9=SSG490Z,1641,2093
Translated Amino Acid sequence
khherllyididihhgdgvedafyttdrvmtvsfhkygdyfpgtgdvkdigadkgkyysl
nfplkdgiddesyqsifrpiirsvmdfyrpgavviqcgadsltgdrlgcfnltlrghapm
yrifkviqctigcigwwwlyy*kcctlldl*nfdfggfrikg*ialq*lfrilwsri*it
yhskqygeskhkrllgeiknstlgks*kfkscsscrss*ytt*ff*lf**rr**rs*c*n
l*s*s**kgtssr*ii*f**rrw*kkl**wfrsyfnlkkkssfnfcl**rktil***k**
***q***YNNNNNNNNSNNNNNNNSSISISLVEISSGSKERNDRDSPSRQLFVSNDGNTL
NTNKERSKSKSIDLEKPEILINNKKKESINLETIKLIETIKGYHVTSHLCICDNLLFTGC
SDNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFT
LEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFS
GSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNLKSLECSAT
LRGHDRWVEHMVICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCV
ISCSHDQSIRVWGWN*fkikkkniknkkniii*i*kkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
kts*ktiiy*y*yssw*wc*rrilynr*sydsiis*vw*lfpryrrc*rywsg*r*ilfi
efpierwyr**ilskyl*tnh*igngfl*trcsgysmwcrfidr**irlfqfniersrsn
vsnf*shsmyhwlywvvvvillkmlhvvglmklrfwwiqn*rmncptmii*nimvqnidy
islqtiwriktqkitwrn*kfnswkilei*imlqlplimiyhlilliilmtkmmkilmle
slklivikryiikvnylilmkkmveeiivmv*kllqpqeeikfqfllmikkdhliiveii
iiitiiii***************q**yfniis*nfkw**rkk**rfak*tiicfk*w*yi
kyk*reikikinrfrktrnfnk**ekreykfgndkin*ny*riscyksfmyl**fiiyrm
fr*fn*sv*l*eskygmcsnlers*rss*inll**sifv*wfirsfn*slgfkeikmyfy
fggs**tcpygsie**ifv*wfl*qnyqslgfenfgm*iyp*kscqsrqntlyiwsifi*
wfk**nyqglgfenfsl*lhskrsy*mghhylyiryqslqwll**nykslefkefrmfry
fkrp**mg*tygnl**iiiyc**r*yn*nlgfrnikm*ynfgrt*cnrsmfsslgr*kmc
y*l*s*sky*slgleli*nkkkkh*eqkkynhinlkkekkkk


Frame B:
khherllyididihhgdgvedafyttdrvmtvsfhkygdyfpgtgdvkdigadkgkyysl
nfplkdgiddesyqsifrpiirsvmdfyrpgavviqcgadsltgdrlgcfnltlrghapm
yrifkviqctigcigwwwlyy*kcctlldl*nfdfggfrikg*ialq*lfrilwsri*it
yhskqygeskhkrllgeiknstlgks*kfkscsscrss*ytt*ff*lf**rr**rs*c*n
l*s*s**kgtssr*ii*f**rrw*kkl**wfrsyfnlkkkssfnfcl**rktil***k**
***q***YNNNNNNNNSNNNNNNNSSISISLVEISSGSKERNDRDSPSRQLFVSNDGNTL
NTNKERSKSKSIDLEKPEILINNKKKESINLETIKLIETIKGYHVTSHLCICDNLLFTGC
SDNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFT
LEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFS
GSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNLKSLECSAT
LRGHDRWVEHMVICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCV
ISCSHDQSIRVWGWN*fkikkkniknkkniii*i*kkkkkkk


Frame C:
nimkdyyililifimvmvlkthfiqqiel*qyhfismviisqvqemlkilerikvniih*
ish*kmv*mmnlikvsldqsldr*wisidqvqwlfnvvqih*qvid*vvsi*h*evtlqc
ieflksfnvplvvlggggytiknvarcwtyetsilvdselkdelpyndyleyygpeyrlh
itpnnmenqntkdyleklkiqllenlrnlnhapaaahhdippdsfnysddeddedpdvri
seadrdkkvhhqgelsdsdeedgrrnysngleatstsrrnqvsisaydkerpsynsrnnn
nnnnnnniiiiiiiiiviiiiitivvfqyh*lkfqvvvkkemieirqvdnylfqmmvih*
iqikrdqnqnq*i*knqkf**iirkkrv*iwkr*n*lkllkdimlqviyvfviiyylqdv
qiiqlecmiirvkiwnvfkp*kvmkvqlnqfviminiclvvhqiiqlkfgi*rn*dvfll
wrvminlsirfy*miniclvvpltklskfgi*klwnvniplkvmpepskhfvylvniylv
vqmiklsrfgi*klfvvttl*kvilngsplsvy*vpistvapmikl*efgi*rv*nvpll
*eamidglniw*fvinyylllvtiiqlkfgi*kh*dviqlwkdimqpfnv*qfgkiknvl
lvvvmikvlefgvginlk*kkktlrtkki*sykskkrkkkk


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U16302-1 (Contig-U16302-1Q)
/CSM_Contig/Contig-U16302-1Q.Seq.d
(2107 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U16302-1 (Contig-U16302-1Q) /CSM_Contig/Conti... 2139 0.0
Contig-U11105-1 (Contig-U11105-1Q) /CSM_Contig/Conti... 58 6e-08
Contig-U13996-1 (Contig-U13996-1Q) /CSM_Contig/Conti... 44 9e-04
Contig-U15698-1 (Contig-U15698-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U12508-1 (Contig-U12508-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U11115-1 (Contig-U11115-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U09243-1 (Contig-U09243-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U02442-1 (Contig-U02442-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U12541-1 (Contig-U12541-1Q) /CSM_Contig/Conti... 40 0.014
Contig-U11729-1 (Contig-U11729-1Q) /CSM_Contig/Conti... 40 0.014

>Contig-U16302-1 (Contig-U16302-1Q) /CSM_Contig/Contig-U16302-1Q.Seq.d
Length = 2107

Score = 2139 bits (1079), Expect = 0.0
Identities = 1103/1115 (98%)
Strand = Plus / Plus


Query: 970 caatagtagtatttcaatatcattagttgaaatttcaagtggtagtaaagaaagaaatga 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 caatagtagtatttcaatatcattagttgaaatttcaagtggtagtaaagaaagaaatga 1029


Query: 1030 tagagattcgccaagtagacaattatttgtttcaaatgatggtaatacattaaatacaaa 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1030 tagagattcgccaagtagacaattatttgtttcaaatgatggtaatacattaaatacaaa 1089


Query: 1090 taaagagagatcaaaatcaaaatcaatagatttagaaaaaccagaaattttaataaataa 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1090 taaagagagatcaaaatcaaaatcaatagatttagaaaaaccagaaattttaataaataa 1149


Query: 1150 taagaaaaaagagagtataaatttggaaacgataaaattaattgaaactattaaaggata 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1150 taagaaaaaagagagtataaatttggaaacgataaaattaattgaaactattaaaggata 1209


Query: 1210 tcatgttacaagtcatttatgtatttgtgataatttattatttacaggatgttcagataa 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1210 tcatgttacaagtcatttatgtatttgtgataatttattatttacaggatgttcagataa 1269


Query: 1270 ttcaattagagtgtatgattataagagtcaaaatatggaatgtgttcaaaccttgaaagg 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1270 ttcaattagagtgtatgattataagagtcaaaatatggaatgtgttcaaaccttgaaagg 1329


Query: 1330 tcatgaaggtccagttgaatcaatttgttataatgatcaatatttgtttagtggttcatc 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1330 tcatgaaggtccagttgaatcaatttgttataatgatcaatatttgtttagtggttcatc 1389


Query: 1390 agatcattcaattaaagtttgggatttaaagaaattaagatgtatttttactttggaggg 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1390 agatcattcaattaaagtttgggatttaaagaaattaagatgtatttttactttggaggg 1449


Query: 1450 tcatgataaacctgtccatacggttctattgaatgataaatatttgtttagtggttcctc 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1450 tcatgataaacctgtccatacggttctattgaatgataaatatttgtttagtggttcctc 1509


Query: 1510 tgacaaaactatcaaagtttgggatttgaaaactttggaatgtaaatatacccttgaaag 1569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1510 tgacaaaactatcaaagtttgggatttgaaaactttggaatgtaaatatacccttgaaag 1569


Query: 1570 tcatgccagagccgtcaaaacactttgtatatctggtcaatatttatttagtggttcaaa 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1570 tcatgccagagccgtcaaaacactttgtatatctggtcaatatttatttagtggttcaaa 1629


Query: 1630 tgataaaactatcaaggtttgggatttgaaaacttttcgttgtaactacactctaaaagg 1689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1630 tgataaaactatcaaggtttgggatttgaaaacttttcgttgtaactacactctaaaagg 1689


Query: 1690 tcatactaaatgggtcaccactatctgtatattaggtaccaatctctacagtggctccta 1749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1690 tcatactaaatgggtcaccactatctgtatattaggtaccaatctctacagtggctccta 1749


Query: 1750 tgataaaactataagagtttggaatttaaagagtttagaatgttccgctactttaagagg 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1750 tgataaaactataagagtttggaatttaaagagtttagaatgttccgctactttaagagg 1809


Query: 1810 ccatgatagatgggttgaacatatggtaatttgtgataaattattatttactgctagtga 1869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1810 ccatgatagatgggttgaacatatggtaatttgtgataaattattatttactgctagtga 1869


Query: 1870 cgataatacaattaaaatttgggatttagaaacattaagatgtaatacaactttggaagg 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1870 cgataatacaattaaaatttgggatttagaaacattaagatgtaatacaactttggaagg 1929


Query: 1930 acataatgcaaccgttcaatgtttagcagtttgggaagataaaaaatgtgttattagttg 1989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1930 acataatgcaaccgttcaatgtttagcagtttgggaagataaaaaatgtgttattagttg 1989


Query: 1990 tagtcatgatcaaagtattagagtttggggttggaattaatttaaaatnnnnnnnnnnnn 2049
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1990 tagtcatgatcaaagtattagagtttggggttggaattaatttaaaataaaaaaaaaaaa 2049


Query: 2050 cattaagaacaaaaaaaatataatcatataaatct 2084
|||||||||||||||||||||||||||||||||||
Sbjct: 2050 cattaagaacaaaaaaaatataatcatataaatct 2084


Score = 1770 bits (893), Expect = 0.0
Identities = 893/893 (100%)
Strand = Plus / Plus


Query: 1 aaaacatcatgaaagactattatatattgatattgatattcatcatggtgatggtgttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaacatcatgaaagactattatatattgatattgatattcatcatggtgatggtgttga 60


Query: 61 agacgcattttatacaacagatagagttatgacagtatcatttcataagtatggtgatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agacgcattttatacaacagatagagttatgacagtatcatttcataagtatggtgatta 120


Query: 121 tttcccaggtacaggagatgttaaagatattggagcggataaaggtaaatattattcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttcccaggtacaggagatgttaaagatattggagcggataaaggtaaatattattcatt 180


Query: 181 gaatttcccattgaaagatggtatagatgatgaatcttatcaaagtatctttagaccaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaatttcccattgaaagatggtatagatgatgaatcttatcaaagtatctttagaccaat 240


Query: 241 cattagatcggtaatggatttctatagaccaggtgcagtggttattcaatgtggtgcaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cattagatcggtaatggatttctatagaccaggtgcagtggttattcaatgtggtgcaga 300


Query: 301 ttcattgacaggtgatagattaggttgtttcaatttaacattgagaggtcacgctccaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcattgacaggtgatagattaggttgtttcaatttaacattgagaggtcacgctccaat 360


Query: 361 gtatcgaatttttaaagtcattcaatgtaccattggttgtattgggtggtggtggttata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtatcgaatttttaaagtcattcaatgtaccattggttgtattgggtggtggtggttata 420


Query: 421 ctattaaaaatgttgcacgttgttggacttatgaaacttcgattttggtggattcagaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctattaaaaatgttgcacgttgttggacttatgaaacttcgattttggtggattcagaat 480


Query: 481 taaaggatgaattgccctacaatgattatttagaatattatggtccagaatatagattac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 taaaggatgaattgccctacaatgattatttagaatattatggtccagaatatagattac 540


Query: 541 atatcactccaaacaatatggagaatcaaaacacaaaagattacttggagaaattaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atatcactccaaacaatatggagaatcaaaacacaaaagattacttggagaaattaaaaa 600


Query: 601 ttcaactcttggaaaatcttagaaatttaaatcatgctccagctgccgctcatcatgata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttcaactcttggaaaatcttagaaatttaaatcatgctccagctgccgctcatcatgata 660


Query: 661 taccacctgattcttttaattattctgatgacgaagatgatgaagatcctgatgttagaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 taccacctgattcttttaattattctgatgacgaagatgatgaagatcctgatgttagaa 720


Query: 721 tctctgaagctgatcgtgataaaaaggtacatcatcaaggtgaattatctgattctgatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tctctgaagctgatcgtgataaaaaggtacatcatcaaggtgaattatctgattctgatg 780


Query: 781 aagaagatggtagaagaaattatagtaatggtttagaagctacttcaacctcaagaagaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aagaagatggtagaagaaattatagtaatggtttagaagctacttcaacctcaagaagaa 840


Query: 841 atcaagtttcaatttctgcttatgataaagaaagaccatcttataatagtaga 893
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 atcaagtttcaatttctgcttatgataaagaaagaccatcttataatagtaga 893


>Contig-U11105-1 (Contig-U11105-1Q) /CSM_Contig/Contig-U11105-1Q.Seq.d
Length = 2892

Score = 58.0 bits (29), Expect = 6e-08
Identities = 29/29 (100%)
Strand = Plus / Plus


Query: 1629 atgataaaactatcaaggtttgggatttg 1657
|||||||||||||||||||||||||||||
Sbjct: 2309 atgataaaactatcaaggtttgggatttg 2337


Score = 40.1 bits (20), Expect = 0.014
Identities = 23/24 (95%)
Strand = Plus / Plus


Query: 1514 aaaactatcaaagtttgggatttg 1537
||||||||||| ||||||||||||
Sbjct: 2314 aaaactatcaaggtttgggatttg 2337


Score = 34.2 bits (17), Expect = 0.84
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 1390 agatcattcaattaaagtttgggat 1414
|||| ||||||| ||||||||||||
Sbjct: 2673 agataattcaatcaaagtttgggat 2697


Score = 34.2 bits (17), Expect = 0.84
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 1396 ttcaattaaagtttggg 1412
|||||||||||||||||
Sbjct: 2802 ttcaattaaagtttggg 2818


>Contig-U13996-1 (Contig-U13996-1Q) /CSM_Contig/Contig-U13996-1Q.Seq.d
Length = 738

Score = 44.1 bits (22), Expect = 9e-04
Identities = 31/34 (91%)
Strand = Plus / Plus


Query: 1519 tatcaaagtttgggatttgaaaactttggaatgt 1552
||||||||||||||||||| |||| || ||||||
Sbjct: 286 tatcaaagtttgggatttggaaacatttgaatgt 319


Score = 32.2 bits (16), Expect = 3.3
Identities = 22/24 (91%)
Strand = Plus / Plus


Query: 1639 tatcaaggtttgggatttgaaaac 1662
|||||| |||||||||||| ||||
Sbjct: 286 tatcaaagtttgggatttggaaac 309


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 50,231
Number of Sequences: 8402
Number of extensions: 50231
Number of successful extensions: 6070
Number of sequences better than 10.0: 272
length of query: 2107
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2090
effective length of database: 7,932,708
effective search space: 16579359720
effective search space used: 16579359720
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 3.25
Homology vs DNA
Query= Contig-U16302-1 (Contig-U16302-1Q) /CSM_Contig/Contig-U16302-1Q.Seq.d
(2107 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BD140494) Elongation factor-2 kinase (EF-2 kinase) and meth... 1657 0.0 1
(AR193041) Sequence 7 from patent US 6346406. 1657 0.0 1
(U90946) Dictyostelium discoideum myosin heavy chain kinase ... 1657 0.0 1
(BJ345063) Dictyostelium discoideum cDNA clone:dda21p12, 3' ... 1231 0.0 1
(C92657) Dictyostelium discoideum slug cDNA, clone SSF701. 1225 0.0 1
(BJ346876) Dictyostelium discoideum cDNA clone:dda25k07, 3' ... 1189 0.0 1
(AU284593) Dictyostelium discoideum gamete cDNA clone:FC-BE0... 706 0.0 2
(AU263299) Dictyostelium discoideum vegetative cDNA clone:VS... 789 0.0 1
(C94168) Dictyostelium discoideum slug cDNA, clone SSG490. 761 0.0 1
(AU051925) Dictyostelium discoideum slug cDNA, clone SSC410. 551 0.0 4
(BJ345521) Dictyostelium discoideum cDNA clone:dda23o23, 3' ... 567 e-157 1
(BJ328375) Dictyostelium discoideum cDNA clone:dda23o23, 5' ... 276 e-127 2
(AU073007) Dictyostelium discoideum slug cDNA, clone SSF701. 349 3e-91 1
(BU135175) 603122787F1 CSEQCHL23 Gallus gallus cDNA clone Ch... 145 2e-38 4
(CK609280) IFNh_J24 Interferon Stimulated Chicken PBL Macrop... 145 4e-37 3
(BU112419) 603131794F1 CSEQCHL14 Gallus gallus cDNA clone Ch... 145 5e-37 4
(BU107530) 603110660F1 CSEQCHL12 Gallus gallus cDNA clone Ch... 145 6e-37 4
(CV856316) gonad_EST03792 Embryonic gonad cDNA Library Gallu... 145 6e-37 4
(BU109033) 603112452F1 CSEQCHL12 Gallus gallus cDNA clone Ch... 145 7e-37 4
(BU325479) 603492385F1 CSEQCHN63 Gallus gallus cDNA clone Ch... 145 7e-37 4
(DT655465) pgr1c.UA001.850 Non-normalized primary chicken re... 145 2e-35 3
(DR411371) gPGC_EST01213 Embryonic gonadal PGC cDNA Library ... 141 3e-35 4
(CD766014) EST00700 Turkey Lambda ZAP Library Meleagris gall... 145 7e-34 2
(DV945317) SB03002A1C11.f1 Normalized subtracted Keck-Tagu L... 145 8e-34 2
(CV857301) gonad_EST04777 Embryonic gonad cDNA Library Gallu... 141 1e-33 3
(DR411083) gPGC_EST00925 Embryonic gonadal PGC cDNA Library ... 141 3e-33 3
(FC664079) CAXW3617.fwd CAXW Lottia gigantea from female gon... 107 2e-32 3
(CB140940) K-EST0194461 L15CKK1 Homo sapiens cDNA clone L15C... 117 2e-32 3
(AR549929) Sequence 5060 from patent US 6747137. 107 3e-32 4
(BP226543) Homo sapiens cDNA clone: DMC02863, Sugano cDNA li... 117 3e-32 3
(BM788311) K-EST0067445 S10SNU1 Homo sapiens cDNA clone S10S... 117 4e-32 3
(AU132519) Homo sapiens cDNA clone:NT2RP3004658, 5' end, exp... 117 5e-32 3
(CV852533) gonad_EST00009 Embryonic gonad cDNA Library Gallu... 141 5e-32 3
(AJ394397) Gallus gallus EST clone 19d16r1. 145 6e-32 2
(FC157251) 1106908655819 BABEVPN-C-01-1-7KB Papio anubis cDN... 117 6e-32 3
(BU128367) 603113163F1 CSEQCHL20 Gallus gallus cDNA clone Ch... 145 7e-32 2
(CV857479) gonad_EST04955 Embryonic gonad cDNA Library Gallu... 145 7e-32 2
(BQ277470) AGENCOURT_6738159 NIH_MGC_127 Homo sapiens cDNA c... 117 7e-32 3
(BU112919) 603128883F1 CSEQCHL14 Gallus gallus cDNA clone Ch... 145 7e-32 2
(BX350469) human full-length cDNA 3-PRIME end of clone CS0DK... 117 7e-32 3
(BG035543) 602325602F1 NIH_MGC_90 Homo sapiens cDNA clone IM... 117 8e-32 3
(BV178313) sqnm99802 Human DNA (Sequenom) Homo sapiens STS g... 117 2e-31 3
(AY892979) Synthetic construct Homo sapiens clone FLH135019.... 117 2e-31 3
(AY409540) Pan troglodytes HDAC2 gene, VIRTUAL TRANSCRIPT, p... 117 2e-31 3
(AY409539) Homo sapiens HDAC2 gene, VIRTUAL TRANSCRIPT, part... 117 2e-31 3
(EA780200) Sequence 4 from patent US 7381825. 117 2e-31 3
(EA760683) Sequence 4 from patent US 7375228. 117 2e-31 3
(EA060794) Sequence 4 from patent US 7169801. 117 2e-31 3
(DI116380) HISTONE DEACETYLASE INHIBITORS. 117 2e-31 3
(DD434583) HISTONE DEACETYLASE INHIBITORS. 117 2e-31 3
(CS791434) Sequence 4 from Patent WO2007084390. 117 2e-31 3
(CS644371) Sequence 4 from Patent WO2006066133. 117 2e-31 3
(CS501537) Sequence 4 from Patent WO2007011626. 117 2e-31 3
(CS457388) Sequence 4 from Patent WO2006122319. 117 2e-31 3
(CS131933) Sequence 4 from Patent WO2005065681. 117 2e-31 3
(CS131549) Sequence 4 from Patent WO2005066151. 117 2e-31 3
(DV770816) ILLUMIGEN_MCQ_70469 Katze_MMTE Macaca mulatta cDN... 117 2e-31 3
(BC013141) Homo sapiens histone deacetylase 2, mRNA (cDNA cl... 117 2e-31 3
(BC148797) Synthetic construct Homo sapiens clone IMAGE:1000... 117 3e-31 3
(BC146376) Synthetic construct Homo sapiens clone IMAGE:1000... 117 3e-31 3
(CR610322) full-length cDNA clone CS0DK008YA01 of HeLa cells... 117 3e-31 3
(CQ719196) Sequence 5130 from Patent WO02068579. 117 3e-31 3
(AK092156) Homo sapiens cDNA FLJ34837 fis, clone NT2NE201063... 117 3e-31 3
(AK296856) Homo sapiens cDNA FLJ56456 complete cds, highly s... 117 4e-31 3
(AK097376) Homo sapiens cDNA FLJ40057 fis, clone TCERX200043... 117 4e-31 3
(BC031055) Homo sapiens histone deacetylase 2, mRNA (cDNA cl... 117 4e-31 3
(CU654361) ovine foetal ovary tissues (Prophase I meiosis) -... 117 5e-31 4
(EW046668) rpigcb_1032.y1 cty Sus scrofa cDNA 5', mRNA seque... 117 2e-30 3
(AB209190) Homo sapiens mRNA for histone deacetylase 2 varia... 117 2e-30 3
(FG746539) G1146P36FP16.T0 Anolis carolinensis pooled normal... 147 2e-30 1
(FG717741) G1144P322FC10.T0 Anolis carolinensis pooled norma... 147 2e-30 1
(FG697333) G1144P318RJ24.T0 Anolis carolinensis pooled norma... 147 2e-30 1
(FC715317) CBBG10054.fwd CBBG Lottia gigantea 12,15,18h embr... 107 3e-30 3
(FC801598) CBGC451.fwd CBGC Lottia gigantea 15h 18h embryos ... 107 3e-30 3
(AF091326) Plasmodium falciparum histone deacetylase (HDAC1)... 121 3e-30 3
(CV858544) gonad_EST06020 Embryonic gonad cDNA Library Gallu... 139 4e-30 2
(DR411441) gPGC_EST01283 Embryonic gonadal PGC cDNA Library ... 145 6e-30 2
(BG167244) 602342504F1 NIH_MGC_89 Homo sapiens cDNA clone IM... 117 6e-30 3
(DV952160) SB03022A2C05.f1 Normalized subtracted Keck-Tagu L... 145 8e-30 1
(DV951029) SB03019A1A12.f1 Normalized subtracted Keck-Tagu L... 145 8e-30 1
(AL585033) Gallus gallus mRNA; expressed sequence tag ROS017... 145 8e-30 1
(AJ398258) Gallus gallus EST clone 5b7r1. 145 8e-30 1
(DL185130) Method of enhancing the diversification of the va... 117 1e-29 3
(AL873956) Xenopus tropicalis EST, clone TEgg134f11 5'. 129 1e-29 2
(CX494201) JGI_XZG36886.fwd NIH_XGC_tropGas7 Xenopus (Silura... 129 1e-29 2
(EL676389) CBST7856.fwd NICHD_XGC_tropThy1 Xenopus (Silurana... 129 1e-29 2
(EW010976) rcsk24_n3.y1 csk Sus scrofa cDNA 5', mRNA sequence. 113 1e-29 3
(CX337802) JGI_XZT59742.fwd NIH_XGC_tropTad5 Xenopus (Silura... 129 1e-29 2
(CO649034) ILLUMIGEN_MCQ_42597 Katze_MMPB2 Macaca mulatta cD... 117 2e-29 3
(FB671551) Sequence 11 from Patent EP1892306. 117 2e-29 3
(EA130955) Sequence 76 from patent US 7220557. 117 2e-29 3
(EA062798) Sequence 623 from patent US 7171311. 117 2e-29 3
(DJ056524) METHODS AND KITS FOR INVESTIGATING CANCER. 117 2e-29 3
(DI092851) Meth1 and Meth2 Polynucleotides and Polypeptides. 117 2e-29 3
(DI091964) Inhibition of Histone Deaceylase. 117 2e-29 3
(DD415288) Diagnosis and Prognosis of Breast Cancer Patients. 117 2e-29 3
(DD412297) The use of molecular markers for the preclinical ... 117 2e-29 3
(DD130037) Diagnosis and Prognosis of Breast Cancer Patients. 117 2e-29 3
(CS351006) Sequence 390 from Patent WO2006013561. 117 2e-29 3
(CS080808) Sequence 11 from Patent WO2005040414. 117 2e-29 3
(CS063027) Sequence 11 from Patent EP1522594. 117 2e-29 3
(CQ796378) Sequence 5 from Patent WO2004027418. 117 2e-29 3
(BD277912) Meth1 and Meth2 Polynucleotides and Polypeptides. 117 2e-29 3
(BD277762) Inhibition of Histone Deaceylase. 117 2e-29 3
(BD129612) Polynucleotides and polypeptides of METH1 and METH2. 117 2e-29 3
(AX821967) Sequence 95 from Patent WO03068961. 117 2e-29 3
(AX578067) Sequence 189 from Patent WO02081745. 117 2e-29 3
(AX053103) Sequence 27 from Patent WO0071703. 117 2e-29 3
(U31814) Human transcriptional regulator homolog RPD3 mRNA, ... 117 2e-29 3
(BC074509) Xenopus tropicalis histone deacetylase 2, mRNA (c... 129 4e-29 2
(FF602014) Le_emcl1_14B18_M13Reverse Little Skate (Leucoraja... 111 8e-29 2
(FF599871) Le_emcl1_12G12_M13Reverse Little Skate (Leucoraja... 111 8e-29 2
(BC120419) Bos taurus histone deacetylase 2, mRNA (cDNA clon... 117 3e-28 3
(FG697286) G1144P318FJ24.T0 Anolis carolinensis pooled norma... 139 5e-28 1
(AU138897) Homo sapiens cDNA clone:PLACE1009523, 5' end, exp... 117 5e-28 3
(EU020782) Mastigoproctus giganteus clone Mga3136f1 putative... 113 8e-28 3
(FF600559) Le_emcl1_01I06_M13Reverse Little Skate (Leucoraja... 98 9e-28 3
(DR418663) gPGC_EST08505 Embryonic gonadal PGC cDNA Library ... 115 1e-27 4
(CF250617) esa015_a06 Eimeiria tenella-infected caecal tonsi... 137 2e-27 1
(AJ678654) Bos taurus EST, clone KN224-027_A09. 117 2e-27 2
(AC021838) Homo sapiens chromosome 6 clone RP11-4L15 map 6, ... 117 2e-27 4
(AL671967) Human DNA sequence from clone RP11-544L8 on chrom... 117 2e-27 4
(ES651397) SA_MX1_98d07_SP6 Dogfish Shark Multiple Tissues, ... 133 3e-27 2
(CR578170) Xenopus tropicalis EST, clone THdA043c06 5'. 121 4e-27 2
(DV920798) LB02923.CR_A16 GC_BGC-29 Bos taurus cDNA clone IM... 117 4e-27 2
(AY967490) Schmidtea mediterranea clone HE.2.01H mRNA sequence. 68 5e-27 5
(EE992650) Le_emtis_210A14_M13R29 Little skate (Leucoraja er... 98 5e-27 2
(EC822659) SME00003551 esmbsro2 Sawyeria marylandensis cDNA,... 135 8e-27 1
(CR926395) Xenopus tropicalis finished cDNA, clone TGas144g21. 121 8e-27 2
(BQ310788) MR0-BN0070-130300-004-b04 BN0070 Homo sapiens cDN... 96 3e-26 3
(FE234294) CAPG2745.fwd CAPG Naegleria gruberi amoeba stage ... 76 3e-26 4
(EG027178) SA_RG0_50g10_SP6 Dogfish Shark Rectal Gland, Norm... 133 3e-26 1
(EE886920) Sa_rcgd_09D06_M13R-29 Spiny dogfish shark rectal ... 133 3e-26 1
(DC105033) Xenopus laevis NBRP cDNA clone:xl237m15, 5' end. 133 3e-26 1
(CX867575) HESC4_22_E08.g1_A037 NIH_MGC_262 Homo sapiens cDN... 117 3e-26 3
(CD359419) AGENCOURT_14251944 NIH_MGC_180 Homo sapiens cDNA ... 117 5e-26 2
(AA282452) zt11g10.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone ... 117 8e-26 2
(CK970553) 4086283 BARC 9BOV Bos taurus cDNA clone 9BOV31_D2... 74 1e-25 4
(FG341471) UFTscEST000602 Embryonic Red-eared Slider Turtle ... 111 1e-25 2
(FG752784) G1146P327FN9.T0 Anolis carolinensis pooled normal... 131 1e-25 1
(BU193614) AGENCOURT_7941020 NIH_MGC_71 Homo sapiens cDNA cl... 117 2e-25 2
(BM468325) AGENCOURT_6475499 NIH_MGC_72 Homo sapiens cDNA cl... 117 2e-25 2
(AL555361) human full-length cDNA 5-PRIME end of clone CS0DK... 117 2e-25 2
(BX425291) human full-length cDNA 5-PRIME end of clone CL0BB... 121 3e-25 2
(AL514474) human full-length cDNA 5-PRIME end of clone CL0BB... 117 3e-25 2
(AA234645) zr66f10.r1 Soares_NhHMPu_S1 Homo sapiens cDNA clo... 70 3e-25 4
(CX884394) JGI_CAAL22833.fwd NIH_XGC_tropBrn4 Xenopus (Silur... 129 5e-25 1
(CX407567) JGI_XZT62956.fwd NIH_XGC_tropTad5 Xenopus (Silura... 129 5e-25 1
(CV858954) gonad_EST06430 Embryonic gonad cDNA Library Gallu... 127 2e-24 1
(AL523091) human full-length cDNA 5-PRIME end of clone CS0DC... 117 4e-24 2
(CU041333) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 117 8e-24 4
(CL965904) OsIFCC012991 Oryza sativa Express Library Oryza s... 98 8e-24 3
(AF513384) Oryza sativa (japonica cultivar-group) histone de... 98 1e-23 3
(DI011028) A Method for Producing a Plant with a High-Growth... 98 1e-23 3
(AR892022) Sequence 3 from patent US 7060873. 98 1e-23 3
(AV190341) Caenorhabditis elegans cDNA clone:yk569h4 : 5' en... 121 2e-23 2
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s... 121 2e-23 6
(GE384687) 293694204 Nasonia vitripennis Female Pupae Nasoni... 103 3e-23 3
(FC730038) CBBG5755.fwd CBBG Lottia gigantea 12,15,18h embry... 107 4e-23 2
(FC717557) CBBG11584.fwd CBBG Lottia gigantea 12,15,18h embr... 107 4e-23 2
(EW423237) rnca12b_n18.y1 nca Sus scrofa cDNA 5', mRNA seque... 92 5e-23 3
(AF377895) Candida albicans histone deacetylase RPD3 gene, c... 84 5e-23 4
(DY465068) 1605456 MARC 11BOV Bos taurus cDNA 5', mRNA seque... 96 9e-23 3
(Z81106) Caenorhabditis elegans Cosmid R06C1. 121 1e-22 1
(DN088810) JGI_CABE2489.fwd NIH_XGC_tropOva1 Xenopus (Silura... 121 1e-22 1
(AU204676) Caenorhabditis elegans cDNA clone:yk840e02 : 5' e... 121 1e-22 1
(DL182963) Inhibition of Specific Histone Deacetylase Isoforms. 101 2e-22 3
(AX703600) Sequence 4 from Patent WO03006652. 101 2e-22 3
(AC164988) Bos taurus clone CH240-159O1, WORKING DRAFT SEQUE... 117 2e-22 7
(BC054208) Xenopus laevis similar to histone deacetylase 2, ... 115 3e-22 2
(DN082797) JGI_CABD13791.rev NIH_XGC_tropLun1 Xenopus (Silur... 119 4e-22 1
(EA682707) Sequence 61586 from patent US 7365185. 98 5e-22 4
(EB470377) AGENCOURT_74416971 NICHD_XGC_limb_m Xenopus laevi... 115 7e-22 2
(DL185128) Method of enhancing the diversification of the va... 96 8e-22 4
(BC081054) Xenopus laevis similar to histone deacetylase 2, ... 115 2e-21 2
(AF039752) Gallus gallus histone deacetylase-2 mRNA, complet... 96 2e-21 4
(CR860416) Pongo abelii mRNA; cDNA DKFZp459A061 (from clone ... 117 2e-21 1
(AG640374) Macaca fuscata fuscata DNA, clone: MSB2-047P21_F,... 117 2e-21 1
(EE371189) LB03030.CR_B12 GC_BGC-30 Bos taurus cDNA clone IM... 117 2e-21 1
(DN996403) TC110918 Human breast cancer tissue, large insert... 117 2e-21 1
(CX871482) HESC4_57_G05.g1_A037 NIH_MGC_262 Homo sapiens cDN... 117 2e-21 1
(AL539747) human full-length cDNA 5-PRIME end of clone CS0DF... 117 2e-21 1
(CB215851) NISC_np10f07.y1 NICHD_HS_Ut1 Homo sapiens cDNA cl... 117 2e-21 1
(CB112915) K-EST0154801 L6ChoCK0 Homo sapiens cDNA clone L6C... 117 2e-21 1
(BX438295) human full-length cDNA 5-PRIME end of clone CS0DA... 117 2e-21 1
(BU942747) AGENCOURT_10512880 NIH_MGC_127 Homo sapiens cDNA ... 117 2e-21 1
(BX782402) Xenopus tropicalis EST, clone TEgg057c24 3'. 101 3e-21 2
(BX416623) human full-length cDNA 5-PRIME end of clone CS0DA... 107 3e-21 2
(EC824660) SME00008209 esmbsro2 Sawyeria marylandensis cDNA,... 115 7e-21 1
(EB472618) AGENCOURT_73735624 NICHD_XGC_olfb Xenopus laevis ... 115 7e-21 1
(AU202373) Caenorhabditis elegans cDNA clone:yk807e09 : 5' e... 115 7e-21 1
(AL870667) Xenopus tropicalis EST, clone TEgg141h06 5'. 115 7e-21 1
(BU912207) AGENCOURT_10457517 NICHD_XGC_OO1 Xenopus laevis c... 115 7e-21 1
(AF513383) Oryza sativa (japonica cultivar-group) histone de... 98 8e-21 3
(DI057713) A Method for Producing a Plant with a High-Growth... 98 8e-21 3
(AR892021) Sequence 2 from patent US 7060873. 98 8e-21 3
(FC721640) CBBG14170.fwd CBBG Lottia gigantea 12,15,18h embr... 107 9e-21 2
(FC678064) CAXX12330.fwd CAXX Lottia gigantea from male gona... 107 9e-21 2
(FC721366) CBBG13997.fwd CBBG Lottia gigantea 12,15,18h embr... 107 1e-20 2
(FC718123) CBBG11934.fwd CBBG Lottia gigantea 12,15,18h embr... 107 1e-20 2
(FC714507) CAXY8903.fwd CAXY Lottia gigantea from male gonad... 107 1e-20 2
(FC776669) CBGB635.fwd CBGB Lottia gigantea 3,6,9,12h embryo... 107 1e-20 2
(AK064000) Oryza sativa Japonica Group cDNA clone:001-124-F0... 98 1e-20 3
(AK103097) Oryza sativa Japonica Group cDNA clone:J033118M13... 98 1e-20 3
(ES395086) MUS01-L02.x1d-t SHGC-MUS Mytilus californianus cD... 103 4e-20 2
(AR549930) Sequence 5061 from patent US 6747137. 84 9e-20 3
(CX043922) UCRCS07_14C10_g Parent Washington Navel Orange Th... 84 9e-20 3
(EY774867) CR05-C1-102-096-E06-CT.F Mandarin leaf, infected ... 92 1e-19 3
(FF317560) 280391746 Pea aphid whole body normalized full le... 96 1e-19 2
(BF700484) 602128838F1 NIH_MGC_56 Homo sapiens cDNA clone IM... 101 2e-19 2
(CX339651) JGI_XZT61054.fwd NIH_XGC_tropTad5 Xenopus (Silura... 76 2e-19 2
(EH182991) LB01760.CR_P06 GC_BGC-17 Bos taurus cDNA clone IM... 109 4e-19 1
(CX165228) HESC2_26_B11.g1_A035 NIH_MGC_258 Homo sapiens cDN... 109 4e-19 1
(CB385783) OSTF031D2_1 AD-wrmcDNA Caenorhabditis elegans cDN... 109 4e-19 1
(FE730607) SB06004B1E05.f1 Normalized subtracted Keck-Tagu L... 109 4e-19 1
(EY715950) CS00-C3-702-060-F06-CT.F Sweet orange fruit, deve... 84 4e-19 3
(AP004780) Oryza sativa Japonica Group genomic DNA, chromoso... 98 4e-19 4
(EY848333) CA26-C1-002-076-D01-CT.F Sour orange leaf, field ... 84 5e-19 3
(EY774951) CR05-C1-102-097-E02-CT.F Mandarin leaf, infected ... 84 5e-19 3
(FC779277) CBGC11697.fwd CBGC Lottia gigantea 15h 18h embryo... 107 5e-19 2
(EA632309) Sequence 11188 from patent US 7365185. 98 1e-18 2
(EY774209) CR05-C1-102-090-F06-CT.F Mandarin leaf, infected ... 84 2e-18 3
(AP004039) Oryza sativa Japonica Group genomic DNA, chromoso... 98 2e-18 5
(DV496687) Sa_em0_03k14_5prime Dogfish Shark Embryo-derived ... 107 2e-18 1
(DT607315) ACAG-aaa65g10.g1 Hydra_EST_UCI-9 Hydra magnipapil... 107 2e-18 1
(DN636020) ACAC-aab53k17.g1 Hydra EST UCI 7 Hydra magnipapil... 107 2e-18 1
(CX848537) JGI_CAAL5800.fwd NIH_XGC_tropBrn4 Xenopus (Silura... 107 2e-18 1
(CV566507) taj97h10.y1 Hydra EST UCI 6 Hydra magnipapillata ... 107 2e-18 1
(FC737893) CBBH2680.fwd CBBH Lottia gigantea 26h,37h,61h Lar... 107 2e-18 1
(FC736446) CBBH1541.fwd CBBH Lottia gigantea 26h,37h,61h Lar... 107 2e-18 1
(FC726200) CBBG3348.fwd CBBG Lottia gigantea 12,15,18h embry... 107 2e-18 1
(FC605702) CAXS2279.fwd CAXS Lottia gigantea from head, foot... 107 2e-18 1
(BH899692) Ots00759 Ostreococcus tauri genomic shotgun libra... 98 2e-18 2
(EA682708) Sequence 61587 from patent US 7365185. 98 3e-18 3
(EL358737) CCEM3570.b1_D05.ab1 CCE(LMS) endive Cichorium end... 78 5e-18 3
(AR550071) Sequence 5202 from patent US 6747137. 62 7e-18 4
(DQ656603) Triticum aestivum histone deacetylase HDAC3 mRNA,... 105 7e-18 1
(BT009381) Triticum aestivum clone wlm96.pk032.f11:fis, full... 105 7e-18 1
(CF134223) WHE4369_D04_H07ZT Wheat meiotic floret cDNA libra... 105 7e-18 1
(CA735485) wpi1s.pk004.g5 wpi1s Triticum aestivum cDNA clone... 105 7e-18 1
(CA729039) wdi1c.pk006.j16 wdi1c Triticum aestivum cDNA clon... 105 7e-18 1
(CX488502) JGI_XZG30306.fwd NIH_XGC_tropGas7 Xenopus (Silura... 82 2e-17 3
(DT448560) JGI_CABK8013.fwd NIH_XGC_tropSpl1 Xenopus (Silura... 82 2e-17 3
(BX760349) Xenopus tropicalis EST, clone TGas121l04 3'. 82 2e-17 3
(ES736694) MytUSCGM5pFLC-I 13l02f1 Mytilus californianus lib... 103 3e-17 1
(DT402649) JGI_CABI5742.fwd NIH_XGC_tropOvi1 Xenopus (Silura... 80 8e-17 3
(AP005846) Oryza sativa Japonica Group genomic DNA, chromoso... 98 1e-16 7
(BC090604) Xenopus tropicalis histone deacetylase 1, mRNA (c... 82 1e-16 3
(AQ185413) HS_3176_A1_F10_T7 CIT Approved Human Genomic Sper... 101 1e-16 1
(CE144955) tigr-gss-dog-17000371278068 Dog Library Canis lup... 101 1e-16 1
(DA514521) Homo sapiens cDNA clone FEBRA2002322, 5' end, mRN... 101 1e-16 1
(BJ125239) Caenorhabditis elegans cDNA clone:yk1320g05 : 5' ... 101 1e-16 1
(DW133872) CLSY1349.b1_I02.ab1 CLS(XYZ) lettuce sativa Lactu... 74 1e-16 2
(EU020787) Speleonectes tulumensis clone Stu3136f1 putative ... 92 1e-16 2
(CT030593) Xenopus tropicalis finished cDNA, clone TNeu105b18. 82 2e-16 3
(FE234189) CAPG2686.fwd CAPG Naegleria gruberi amoeba stage ... 76 3e-16 3
(EA162247) Sequence 26562 from patent US 7214786. 90 3e-16 2
(CT811494) Paramecium tetraurelia 5-PRIME EST from clone LK0... 72 3e-16 3
(CD420847) ku92c07.y1 Strongyloides ratti PA female naive pA... 60 3e-16 4
(ER328729) 1092344238085 Global-Ocean-Sampling_GS-34-01-01-1... 100 4e-16 1
(AF020658) Xenopus laevis deacetylase (RPD3) mRNA, complete ... 78 4e-16 4
(FF568546) TTBBN39TVB Tetrahymena thermophila CU428 log phas... 74 4e-16 4
(BI177518) EST518463 cSTE Solanum tuberosum cDNA clone cSTE1... 86 5e-16 2
(EL911830) INIT2_48_G07.b1_A006 G5 trophont cDNA (INIT2) Ich... 78 5e-16 2
(AL437538) T7 end of clone BC0AA009H09 of library BC0AA from... 76 7e-16 4
(BP680329) Xenopus laevis NBRP cDNA clone:XL434i07ex, 5' end. 64 7e-16 2
(EF147270) Populus trichocarpa clone WS0122_C01 unknown mRNA. 78 1e-15 4
(BP886667) Solanum lycopersicum cDNA, clone: FA35AF01, 5' en... 84 1e-15 2
(BC041296) Xenopus laevis similar to histone deacetylase 1, ... 78 1e-15 4
(DQ448817) Oryza sativa (indica cultivar-group) genomic sequ... 90 1e-15 4
(DY679876) TTDA394TG Tetrahymena thermophila EST library str... 74 1e-15 4
(AC232639) Solanum lycopersicum chromosome 6 clone C06HBa024... 88 1e-15 3
(AP008208) Oryza sativa (japonica cultivar-group) genomic DN... 98 2e-15 1
(DR771151) ILLUMIGEN_MCQ_66150 Katze_MMTE Macaca mulatta cDN... 98 2e-15 1
(AL865800) Xenopus tropicalis EST, clone TEgg129h15 5'. 98 2e-15 1
(AL846566) Xenopus tropicalis EST, clone TEgg001c18 5'. 98 2e-15 1
(CD450640) USDA-FP_102603 Adult Alate Brown Citrus Aphid Tox... 98 2e-15 1
(CA031964) HX11J24r HX Hordeum vulgare subsp. vulgare cDNA c... 98 2e-15 1
(BQ458409) HA05F05r HA Hordeum vulgare subsp. vulgare cDNA c... 98 2e-15 1
(BE558877) HV_CEb0020K09f Hordeum vulgare seedling green lea... 98 2e-15 1
(FG341342) UFTscEST000440 Embryonic Red-eared Slider Turtle ... 98 2e-15 1
(EU020783) Narceus americanus clone Nam3136f1 putative histo... 88 2e-15 2
(EU020779) Lithobius forticatus clone Lfo3136f1 putative his... 86 2e-15 2
(BT013616) Lycopersicon esculentum clone 132417F, mRNA seque... 84 5e-15 2
(FC776668) CBGB635.rev CBGB Lottia gigantea 3,6,9,12h embryo... 56 5e-15 3
(BU985149) HF06E13r HF Hordeum vulgare subsp. vulgare cDNA c... 84 5e-15 2
(AL135919) Human DNA sequence *** SEQUENCING CANCELLED *** f... 62 6e-15 5
(AL782608) Xenopus tropicalis EST, clone TGas080c17 5'. 82 6e-15 2
(CF972927) PSU_2blonup1C03 Defense-related ESTs from Cacao L... 74 6e-15 2
(DC112125) Xenopus laevis NBRP cDNA clone:xl261e13, 5' end. 86 6e-15 2
(DC112126) Xenopus laevis NBRP cDNA clone:xl261e14, 5' end. 86 6e-15 2
(CU615119) Theobroma cacao, mRNA sequence (KZ0AAN1YO16). 96 6e-15 1
(CN759388) ID0AAA25BF05RM1 ApMS Acyrthosiphon pisum cDNA clo... 96 6e-15 1
(BP674471) Xenopus laevis NBRP cDNA clone:XL416n15ex, 5' end. 86 7e-15 2
(CX512049) JGI_XZG57149.fwd NIH_XGC_tropGas7 Xenopus (Silura... 82 7e-15 2
(CR409733) Xenopus tropicalis EST, clone TTbA007p11 5'. 82 7e-15 2
(CR412417) Xenopus tropicalis EST, clone TTbA012h18 5'. 82 8e-15 2
(CX439729) JGI_XZG7829.fwd NIH_XGC_tropGas7 Xenopus (Siluran... 82 8e-15 2
(DT438569) JGI_CABK2166.fwd NIH_XGC_tropSpl1 Xenopus (Silura... 82 8e-15 2
(CR582466) Xenopus tropicalis EST, clone THdA049k06 5'. 62 1e-14 2
(DN813646) ACAC-aac52h10.g1 Hydra EST UCI 7 Hydra magnipapil... 68 1e-14 2
(DA981397) Homo sapiens cDNA clone SYNOV2013402, 5' end, mRN... 64 1e-14 2
(X78454) X.laevis AB21 mRNA for RPD3 homologue. 86 2e-14 2
(BC081136) Xenopus laevis yeast RPD3 homologue, mRNA (cDNA c... 86 2e-14 2
(AU202580) Caenorhabditis elegans cDNA clone:yk810c04 : 5' e... 94 3e-14 1
(BQ086947) Cri_10_E06_SP6 Ceratopteris Spore Library Ceratop... 94 3e-14 1
(ER864278) POTM052TR Solanum tuberosum RHPOTKEY BAC ends Sol... 86 3e-14 2
(EU020780) Limulus polyphemus clone Lpo3136f1 putative histo... 86 3e-14 2
(EW084220) recc2805c_f18.y1 ecc Sus scrofa cDNA 5', mRNA seq... 62 3e-14 3
(DT736618) EST1170467 Aquilegia cDNA library Aquilegia formo... 54 4e-14 3
(EL679269) CBST947.fwd NICHD_XGC_tropThy1 Xenopus (Silurana)... 80 4e-14 2
(DY547652) AGENCOURT_69877095 NICHD_XGC_Emb10 Xenopus laevis... 78 5e-14 3
(EF565139) Cyclorana alboguttata histone deacetylase 1-like ... 92 5e-14 2
(FC814589) Sr_pASP6_018g05_SP6 S. ratti mixed stage pAMP Str... 64 6e-14 4
(FC714506) CAXY8903.rev CAXY Lottia gigantea from male gonad... 56 6e-14 3
(DY678584) TT1AO36TH Tetrahymena thermophila EST library str... 74 7e-14 3
(CN597283) TTE00009327 Normalized large Tetrahymena thermoph... 74 7e-14 3
(FF567823) TTBB171TG Tetrahymena thermophila CU428 log phase... 74 7e-14 3
(AL969502) Xenopus tropicalis EST, clone TGas096c17 5'. 82 7e-14 2
(FF569262) TTBC729TVB Tetrahymena thermophila CU428 log phas... 74 7e-14 3
(EB463294) AGENCOURT_73510848 NICHD_XGC_sple_PHA Xenopus lae... 78 7e-14 3
(FF459150) G50P6049FB9.T0 Acorn worm gastrula/neurula pCMVSp... 74 8e-14 2
(FF570115) TTBCU20TV Tetrahymena thermophila CU428 log phase... 66 8e-14 4
(FF492399) G708P5214RF2.T0 Acorn worm normalized gastrula pE... 92 9e-14 2
(CJ985782) Bursaphelenchus xylophilus cDNA clone: Bx_K1_82C0... 54 9e-14 3
(BW337141) Ciona intestinalis cDNA, clone:ciem805c03, 5'end,... 60 9e-14 2
(FF499076) G708P592RA4.T0 Acorn worm normalized gastrula pEx... 92 9e-14 2
(FF472406) G613P6087RA1.T0 Acorn worm blastula/gastrula pCMV... 74 9e-14 2
(FF626597) G825P5322RD2.T0 Acorn worm normalized gastrula pE... 74 1e-13 2
(AC151525) Medicago truncatula clone mth2-77j8, WORKING DRAF... 92 1e-13 1
(EL911912) INIT2_48_G07.g1_A006 G5 trophont cDNA (INIT2) Ich... 92 1e-13 1
(DY891647) CeleSEQ10393 Cunninghamella elegans pBluescript (... 92 1e-13 1
(CD054092) HO02I08S HO Hordeum vulgare cDNA clone HO02I08 5-... 92 1e-13 1
(FF664085) G826P5320RB8.T0 Acorn worm normalized juvenile pE... 92 1e-13 1
(FF663533) G826P5317RD5.T0 Acorn worm normalized juvenile pE... 92 1e-13 1
(FF652582) G826P5249RF12.T0 Acorn worm normalized juvenile p... 92 1e-13 1
(FF636468) G825P57RB3.T0 Acorn worm normalized gastrula pExp... 92 1e-13 1
(FF603164) G825P5107RD4.T0 Acorn worm normalized gastrula pE... 92 1e-13 1
(FF531120) G710P5395RA12.T0 Acorn worm normalized juvenile p... 92 1e-13 1
(FF524831) G710P5300RC10.T0 Acorn worm normalized juvenile p... 92 1e-13 1
(FF499424) G708P596RE9.T0 Acorn worm normalized gastrula pEx... 92 1e-13 1
(FF493811) G708P5231RD2.T0 Acorn worm normalized gastrula pE... 92 1e-13 1
(FF478579) G613P6200RD7.T0 Acorn worm blastula/gastrula pCMV... 92 1e-13 1
(DT633950) EST1148881 Normalized pine embryo library, Lib_D ... 76 1e-13 2
(CX346399) JGI_XZT43643.fwd NIH_XGC_tropTad5 Xenopus (Silura... 82 1e-13 2
(DW488997) GH_RMIRS_072_F09_R Cotton Normalized Library rand... 60 1e-13 2
(FK195170) XABT207887.b1 Gateway compatible cien cDNA librar... 60 2e-13 3
(FK045787) XABT114894.b1 Gateway compatible cien cDNA librar... 58 2e-13 3
(FF965175) CBWU90223.b1 Yutaka Satou unpublished cDNA librar... 60 2e-13 3
(FF997659) CBWU114094.b1 Yutaka Satou unpublished cDNA libra... 60 2e-13 3
(AI152192) ud19g01.r1 Soares_thymus_2NbMT Mus musculus cDNA ... 70 2e-13 3
(BX782999) Xenopus tropicalis EST, clone TEgg055d04 3'. 68 2e-13 3
(EF077626) Schistosoma mansoni histone deacetylase 1 (HDAC1)... 82 3e-13 3
(DJ335369) CELL CYCLE GENES AND RELATED METHODS OF USING. 76 3e-13 2
(BE669282) dc57d03.y1 NICHD_XGC_Emb1 Xenopus laevis cDNA clo... 86 3e-13 2
(BX517666) RZPD Mus musculus cDNA clone IMAGp998O04814 = IMA... 70 4e-13 3
(DJ335366) CELL CYCLE GENES AND RELATED METHODS OF USING. 90 4e-13 1
(CR954202) Ostreococcus tauri chromosome 02 contig 1, DNA se... 90 4e-13 1
(EG985741) GLE048_B08_031 Cyamopsis tetragonoloba (L.) Taub ... 90 4e-13 1
(CK209285) FGAS021046 Triticum aestivum FGAS: Library 5 GATE... 90 4e-13 1
(CK208620) FGAS020334 Triticum aestivum FGAS: Library 5 GATE... 90 4e-13 1
(CK208604) FGAS020318 Triticum aestivum FGAS: Library 5 GATE... 90 4e-13 1
(CJ648468) Triticum aestivum cDNA clone whem13d03 5', Y.Ogih... 90 4e-13 1
(CJ639133) Triticum aestivum cDNA clone whec15n08 5', Y.Ogih... 90 4e-13 1
(CD938360) OV.109M24F010309 OV Triticum aestivum cDNA clone ... 90 4e-13 1
(BQ743407) WHE4103_F04_L07ZS Wheat salt-stressed root cDNA l... 90 4e-13 1
(BJ800644) Caenorhabditis elegans cDNA clone:yk1440b03 : 5' ... 90 4e-13 1
(BJ329462) Dictyostelium discoideum cDNA clone:dda25e02, 5' ... 90 4e-13 1
(BJ259381) Triticum aestivum cDNA clone:whh12k24, 5' end, si... 90 4e-13 1
(FL581630) TRR-955 TR7RS Triticum turgidum subsp. dicoccoide... 90 4e-13 1
(FK828032) TR7RS-369 TR7RS Triticum turgidum subsp. dicoccoi... 90 4e-13 1
(AJ665169) Sus scrofa EST, clone C0000030_A16. 56 6e-13 3
(FG105357) ioAGSL2p45464748_D11_046.ab1 Pristionchus_pacific... 70 6e-13 2
(FG102362) ioAGSL204050607_M23_084.ab1 Pristionchus_pacificu... 70 6e-13 2
(AW686294) NF036C08NR1F1000 Nodulated root Medicago truncatu... 78 6e-13 2
(GE900904) 1112934974891 BABEVCEREB-C-01-1-7KB Papio anubis ... 52 7e-13 3
(CX241954) NMA05011 Mus Musculus Lateral Ventricle Wall C57B... 70 8e-13 3
(AK135572) Mus musculus 11 days embryo gonad cDNA, RIKEN ful... 70 1e-12 3
(BX778019) Xenopus tropicalis EST, clone TEgg055d07 3'. 66 1e-12 3
(CA389293) cs07g02.y1 Human Retinal pigment epithelium/choro... 50 1e-12 3
(EV826755) TT1EO25TH Tetrahymena thermophila SB210 cDNA libr... 74 1e-12 3
(W46034) mc82f02.r1 Soares mouse embryo NbME13.5 14.5 Mus mu... 70 1e-12 3
(CN068318) M10_Ag2_p18_I20_M13R AG Ambystoma tigrinum tigrin... 68 1e-12 3
(AL873085) Xenopus tropicalis EST, clone TEgg124b21 5'. 58 1e-12 4
(AF282858) Mesembryanthemum crystallinum histone deacetylase... 88 2e-12 1
(BW687585) Solanum lycopersicum cDNA, clone: FC09CE01, 5' en... 88 2e-12 1
(GE397606) 293782570 Nasonia vitripennis Female Pupae Nasoni... 88 2e-12 1
(EH688034) CCIM12731.b1_E15.ab1 CCI(LMS) chicory Cichorium i... 78 2e-12 2
(ES685600) CCAX8418.b1 NICHD_XGC_tropEye1 Xenopus (Silurana)... 58 2e-12 4
(CZ284402) cp35d01.f Candida parapsilosis Random Genomic Lib... 76 2e-12 2
(AB221663) Mus musculus cDNA pooled tissues:(tissue_type=bra... 70 3e-12 3
(DL185129) Method of enhancing the diversification of the va... 70 3e-12 3
(AY409541) Mus musculus HDAC2 gene, VIRTUAL TRANSCRIPT, part... 70 3e-12 3
(BC138517) Mus musculus histone deacetylase 2, mRNA (cDNA cl... 70 4e-12 3
(AF384032) Zea mays histone deacetylase HDA101 (hda101) mRNA... 70 4e-12 2
(AR254091) Sequence 7 from patent US 6479629. 70 4e-12 2
(AR168366) Sequence 7 from patent US 6287843. 70 4e-12 2
(BT042639) Zea mays full-length cDNA clone ZM_BFc0001N04 mRN... 70 4e-12 2
(AF035815) Zea mays putative histone deacetylase RPD3 mRNA, ... 70 4e-12 2
(AY112571) Zea mays CL997_1 mRNA sequence. 70 4e-12 2
(EV838160) TT1DZ43TH Tetrahymena thermophila SB210 cDNA libr... 74 4e-12 3
(CF906077) A0442D12-5 NIA Mouse Osteoblast cDNA Library (Lon... 70 4e-12 2
(CZ171326) MIAA-24I14b.g1 Meloidogyne incognita BAC end sequ... 74 5e-12 2
(CF219911) AGENCOURT_15040594 NICHD_XGC_Emb5 Xenopus (Silura... 58 5e-12 4
(U31758) Mus musculus transcriptional regulator RPD3 homolog... 70 5e-12 3
(DI124420) DNA CHIP FOR GENE EXPRESSON MONITORING ABOUT APOP... 70 5e-12 3
(DD013762) METHOD FOR EXAMINING ISCHEMIC CONDITIONS. 70 5e-12 3
(AX305742) Sequence 493 from Patent WO0188188. 70 5e-12 3
(FF492929) G708P5220RH7.T0 Acorn worm normalized gastrula pE... 86 5e-12 2
(FK172480) XABT193924.b1 Gateway compatible cien cDNA librar... 60 5e-12 2
(DV679889) CGN-18261 Seed of Middle Development Stage Coffea... 84 6e-12 2
(FG915256) UCRVU08_CCNS9776_b1 Cowpea IT97K-461-4 Mixed Tiss... 58 6e-12 4
(EI824097) POTJ539TR Solanum tuberosum RHPOTKEY BAC ends Sol... 86 6e-12 1
(EB644808) AGENCOURT_75472085 NICHD_XGC_thy Xenopus laevis c... 86 6e-12 1
(EB465640) AGENCOURT_73653600 NICHD_XGC_int_m Xenopus laevis... 86 6e-12 1
(DC125619) Xenopus laevis NBRP cDNA clone:xl308k07, 5' end. 86 6e-12 1
(DC109815) Xenopus laevis NBRP cDNA clone:xl253h16, 5' end. 86 6e-12 1
(DC106112) Xenopus laevis NBRP cDNA clone:xl241d22, 5' end. 86 6e-12 1
(DC050031) Xenopus laevis NBRP cDNA clone:xlk144l12ex, 5' end. 86 6e-12 1
(DB710520) Solanum lycopersicum cDNA, clone: LEFL2005I19, 5'... 86 6e-12 1
(DB698269) Solanum lycopersicum cDNA, clone: LEFL1063BC03, 5... 86 6e-12 1
(CO581647) ILLUMIGEN_MCQ_46914 Katze_MMJJ Macaca mulatta cDN... 86 6e-12 1
(CA986918) AGENCOURT_11108161 NICHD_XGC_Emb1 Xenopus laevis ... 86 6e-12 1
(CA986136) AGENCOURT_11303142 NICHD_XGC_OO1 Xenopus laevis c... 86 6e-12 1
(CA792836) AGENCOURT_10317341 NICHD_XGC_Emb1 Xenopus laevis ... 86 6e-12 1
(CA791016) AGENCOURT_10305651 NICHD_XGC_OO1 Xenopus laevis c... 86 6e-12 1
(CA789781) AGENCOURT_10308343 NICHD_XGC_Emb1 Xenopus laevis ... 86 6e-12 1
(CA787820) AGENCOURT_11031030 NICHD_XGC_OO1 Xenopus laevis c... 86 6e-12 1
(BU913295) AGENCOURT_10495578 NICHD_XGC_OO1 Xenopus laevis c... 86 6e-12 1
(BU906381) AGENCOURT_10455129 NICHD_XGC_Emb1 Xenopus laevis ... 86 6e-12 1
(BP701015) Xenopus laevis NBRP cDNA clone:XL500d05ex, 5' end. 86 6e-12 1
(BP689196) Xenopus laevis NBRP cDNA clone:XL423l05ex, 5' end. 86 6e-12 1
(BP684283) Xenopus laevis NBRP cDNA clone:XL445i04ex, 5' end. 86 6e-12 1
(BJ626850) Xenopus laevis cDNA clone:XL216c22, 5' end. 86 6e-12 1
(BF611894) de89f02.y1 Wellcome CRC pRN3 St19 26 Xenopus laev... 86 6e-12 1
(FG909086) UCRVU08_CCNS6474_b1 Cowpea IT97K-461-4 Mixed Tiss... 86 6e-12 1
(FF529188) G710P5364RC2.T0 Acorn worm normalized juvenile pE... 86 6e-12 1
(FF488986) G708P515RF12.T0 Acorn worm normalized gastrula pE... 86 6e-12 1
(EU020791) Antheraea paukstadtorum clone Apauk3136f1 putativ... 68 7e-12 2
(CR382138) Debaryomyces hansenii strain CBS767 chromosome F ... 76 8e-12 2
(AJ451083) Gallus gallus EST, clone library riken1, clone 27... 54 9e-12 2
(CV547678) Sa_mx0_01a07_SP6 Dogfish Shark Multiple Tissues, ... 74 9e-12 2
(EG026940) SA_RG0_48d12_SP6 Dogfish Shark Rectal Gland, Norm... 74 9e-12 2
(ES884040) SA_MX2_27h11_SP6 Dogfish Shark Multiple Tissues, ... 74 9e-12 2
(BW075545) Ciona intestinalis cDNA, clone:rcieg066e20, 3' en... 58 9e-12 3
(BW110931) Ciona intestinalis cDNA, clone:rcitb100m14, 3' en... 54 1e-11 3
(AK051753) Mus musculus 12 days embryo spinal ganglion cDNA,... 70 1e-11 3
(FF722062) XABT38836.fwd Gateway compatible cien cDNA librar... 58 1e-11 3
(CN595776) TTE00014894 Normalized large Tetrahymena thermoph... 66 1e-11 3
(AL428565) clone BA0AB026E09 of library BA0AB from strain CL... 72 1e-11 3
(AV984775) Ciona intestinalis cDNA, clone:cilv38j01, 5' end,... 60 2e-11 2
(AL426842) clone BA0AB015D09 of library BA0AB from strain CL... 72 2e-11 3
(AY035205) Kluyveromyces lactis Pex6p (PEX6) gene, partial c... 72 2e-11 4
(BW294199) Ciona intestinalis cDNA, clone:cigd006n13, 5' end... 60 2e-11 2
(BI516469) BB160022B10B04.5 Bee Brain Normalized Library, BB... 60 2e-11 3
(FF689655) XABT102722.fwd Gateway compatible cien cDNA libra... 60 2e-11 2
(FF866768) CBWU12267.b1 Yutaka Satou unpublished cDNA librar... 60 2e-11 2
(EB325872) CNSN01-F-104408-501 Normalized CNS library (juven... 64 2e-11 2
(FF909394) CBWU39304.b1 Yutaka Satou unpublished cDNA librar... 60 2e-11 2
(CN068733) N19_Ag2_p20_L18_M13R AG Ambystoma tigrinum tigrin... 68 2e-11 2
(DR181196) RTMNUT1_37_A03.g2_A029 Roots minus micronutrients... 76 2e-11 2
(FF785542) XABT83174.fwd Gateway compatible cien cDNA librar... 60 2e-11 2
(EV834502) TT1D685TH Tetrahymena thermophila SB210 cDNA libr... 74 2e-11 2
(FF940547) CBWU74702.b1 Yutaka Satou unpublished cDNA librar... 60 2e-11 2
(CN592367) TTE00012902 Normalized large Tetrahymena thermoph... 74 2e-11 2
(CN592908) TTE00011156 Normalized large Tetrahymena thermoph... 74 2e-11 2
(EV833856) TT1D917TH Tetrahymena thermophila SB210 cDNA libr... 74 2e-11 2
(EY666424) CS00-C1-102-017-G01-CT.F Sweet orange leaf, infec... 84 2e-11 2
(EU020786) Podura aquatica clone Paq3136f1 putative histone ... 84 2e-11 1
(EL599823) He_pwd_0128C02_M13R Heliconius erato pooled wing ... 84 2e-11 1
(DB722149) Solanum lycopersicum cDNA, clone: LEFL2039O08, 5'... 84 2e-11 1
(CX671708) UCRCS10_12F10_g Madame Vinous Sweet Orange Multip... 84 2e-11 1
(CX671374) UCRCS10_10F11_g Madame Vinous Sweet Orange Multip... 84 2e-11 1
(CV707084) UCRPT01_0009E21_r Poncirus trifoliata CTV-challen... 84 2e-11 1
(AL871012) Xenopus tropicalis EST, clone TEgg129h22 5'. 84 2e-11 1
(CK701932) USDA-FP_5193 Ridge pineapple sweet orange entire ... 84 2e-11 1
(CB292206) UCRCS01_04ae09_g1 Washington Navel orange cold ac... 84 2e-11 1
(GE306157) OXAY-aaa38c04.b1 Oxytricha_pSMART_OXAY Sterkiella... 84 2e-11 1
(GE301791) OXAY-aaa47e04.g1 Oxytricha_pSMART_OXAY Sterkiella... 84 2e-11 1
(EY842847) CA26-C1-002-005-F03-CT.F Sour orange leaf, field ... 84 2e-11 1
(EY842707) CA26-C1-002-004-H10-CT.F Sour orange leaf, field ... 84 2e-11 1
(EY748395) CS00-C5-003-058-A01-CT.F Sweet orange flower, gre... 84 2e-11 1
(EY667774) CS00-C1-102-025-D01-CT.F Sweet orange leaf, infec... 84 2e-11 1
(FK225017) XABT227085.b1 Gateway compatible cien cDNA librar... 52 3e-11 3
(EB251904) CNSN01-C-011327-501 Normalized CNS library (juven... 64 3e-11 2
(CO111254) GR__Eb0047C24.r GR__Eb Gossypium raimondii cDNA c... 52 3e-11 3
(AY779022) Entamoeba histolytica histone deacetylase 1 (HDAC... 64 3e-11 3
(CR848582) Xenopus tropicalis finished cDNA, clone TEgg067n06. 58 3e-11 2
(BY093186) Mus musculus 13 days embryo whole body cDNA, RIKE... 62 3e-11 3
(CX514130) JGI_XZG44450.fwd NIH_XGC_tropGas7 Xenopus (Silura... 58 4e-11 2
(CX977871) JGI_CAAP10479.rev NIH_XGC_tropInt1 Xenopus (Silur... 58 4e-11 2
(CX925885) JGI_CAAN10684.fwd NIH_XGC_tropTe4 Xenopus (Silura... 58 4e-11 2
(DN062354) JGI_CABD676.fwd NIH_XGC_tropLun1 Xenopus (Siluran... 58 4e-11 2
(CX917912) JGI_CAAN6407.fwd NIH_XGC_tropTe4 Xenopus (Siluran... 58 4e-11 2
(CR433996) Xenopus tropicalis EST, clone TTbA055k24 5'. 58 4e-11 2
(DW225892) GH_HYPT_01-01-14R_D12_InvR_22Apr04_090_F Stem - 3... 52 4e-11 3
(AL363606) Mus musculus mRNA; expressed sequence tag; clone ... 62 4e-11 3
(CO132245) GR__Eb44P09.r GR__Eb Gossypium raimondii cDNA clo... 52 4e-11 3
(AK113129) Ciona intestinalis cDNA, clone:ciad008m17, full i... 60 6e-11 2
(FE936765) AHAI-aaa03c12.b2 Pristionchus_pacificus_AHAI1_EST... 52 7e-11 4

>(BD140494) Elongation factor-2 kinase (EF-2 kinase) and methods of
use therefor.
Length = 2237

Score = 1657 bits (836), Expect = 0.0
Identities = 836/836 (100%)
Strand = Plus / Plus


Query: 1197 ctattaaaggatatcatgttacaagtcatttatgtatttgtgataatttattatttacag 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1382 ctattaaaggatatcatgttacaagtcatttatgtatttgtgataatttattatttacag 1441


Query: 1257 gatgttcagataattcaattagagtgtatgattataagagtcaaaatatggaatgtgttc 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1442 gatgttcagataattcaattagagtgtatgattataagagtcaaaatatggaatgtgttc 1501


Query: 1317 aaaccttgaaaggtcatgaaggtccagttgaatcaatttgttataatgatcaatatttgt 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1502 aaaccttgaaaggtcatgaaggtccagttgaatcaatttgttataatgatcaatatttgt 1561


Query: 1377 ttagtggttcatcagatcattcaattaaagtttgggatttaaagaaattaagatgtattt 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1562 ttagtggttcatcagatcattcaattaaagtttgggatttaaagaaattaagatgtattt 1621


Query: 1437 ttactttggagggtcatgataaacctgtccatacggttctattgaatgataaatatttgt 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1622 ttactttggagggtcatgataaacctgtccatacggttctattgaatgataaatatttgt 1681


Query: 1497 ttagtggttcctctgacaaaactatcaaagtttgggatttgaaaactttggaatgtaaat 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1682 ttagtggttcctctgacaaaactatcaaagtttgggatttgaaaactttggaatgtaaat 1741


Query: 1557 atacccttgaaagtcatgccagagccgtcaaaacactttgtatatctggtcaatatttat 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1742 atacccttgaaagtcatgccagagccgtcaaaacactttgtatatctggtcaatatttat 1801


Query: 1617 ttagtggttcaaatgataaaactatcaaggtttgggatttgaaaacttttcgttgtaact 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1802 ttagtggttcaaatgataaaactatcaaggtttgggatttgaaaacttttcgttgtaact 1861


Query: 1677 acactctaaaaggtcatactaaatgggtcaccactatctgtatattaggtaccaatctct 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1862 acactctaaaaggtcatactaaatgggtcaccactatctgtatattaggtaccaatctct 1921


Query: 1737 acagtggctcctatgataaaactataagagtttggaatttaaagagtttagaatgttccg 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1922 acagtggctcctatgataaaactataagagtttggaatttaaagagtttagaatgttccg 1981


Query: 1797 ctactttaagaggccatgatagatgggttgaacatatggtaatttgtgataaattattat 1856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1982 ctactttaagaggccatgatagatgggttgaacatatggtaatttgtgataaattattat 2041


Query: 1857 ttactgctagtgacgataatacaattaaaatttgggatttagaaacattaagatgtaata 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2042 ttactgctagtgacgataatacaattaaaatttgggatttagaaacattaagatgtaata 2101


Query: 1917 caactttggaaggacataatgcaaccgttcaatgtttagcagtttgggaagataaaaaat 1976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2102 caactttggaaggacataatgcaaccgttcaatgtttagcagtttgggaagataaaaaat 2161


Query: 1977 gtgttattagttgtagtcatgatcaaagtattagagtttggggttggaattaattt 2032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2162 gtgttattagttgtagtcatgatcaaagtattagagtttggggttggaattaattt 2217

Score = 212 bits (107), Expect(5) = 2e-68
Identities = 110/111 (99%)
Strand = Plus / Plus


Query: 975 gtagtatttcaatatcattagttgaaatttcaagtggtagtaaagaaagaaatgatagag 1034
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1160 gtagtatttcaaaatcattagttgaaatttcaagtggtagtaaagaaagaaatgatagag 1219


Query: 1035 attcgccaagtagacaattatttgtttcaaatgatggtaatacattaaata 1085
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 attcgccaagtagacaattatttgtttcaaatgatggtaatacattaaata 1270

Score = 67.9 bits (34), Expect(5) = 2e-68
Identities = 52/58 (89%)
Strand = Plus / Plus


Query: 1488 aatatttgtttagtggttcctctgacaaaactatcaaagtttgggatttgaaaacttt 1545
||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||||
Sbjct: 1793 aatatttatttagtggttcaaatgataaaactatcaaggtttgggatttgaaaacttt 1850

Score = 44.1 bits (22), Expect(5) = 2e-68
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 1361 aatgatcaatatttgtttagtggttc 1386
|||||| |||||||||||||||||||
Sbjct: 1666 aatgataaatatttgtttagtggttc 1691

Score = 28.2 bits (14), Expect(5) = 2e-68
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 1403 aaagtttgggattt 1416
||||||||||||||
Sbjct: 1708 aaagtttgggattt 1721

Score = 26.3 bits (13), Expect(5) = 2e-68
Identities = 13/13 (100%)
Strand = Plus / Plus


Query: 1629 atgataaaactat 1641
|||||||||||||
Sbjct: 1934 atgataaaactat 1946

Score = 67.9 bits (34), Expect(4) = 3e-13
Identities = 52/58 (89%)
Strand = Plus / Plus


Query: 1608 aatatttatttagtggttcaaatgataaaactatcaaggtttgggatttgaaaacttt 1665
||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||||
Sbjct: 1673 aatatttgtttagtggttcctctgacaaaactatcaaagtttgggatttgaaaacttt 1730

Score = 44.1 bits (22), Expect(4) = 3e-13
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 1481 aatgataaatatttgtttagtggttc 1506
|||||| |||||||||||||||||||
Sbjct: 1546 aatgatcaatatttgtttagtggttc 1571

Score = 28.2 bits (14), Expect(4) = 3e-13
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 1523 aaagtttgggattt 1536
||||||||||||||
Sbjct: 1588 aaagtttgggattt 1601

Score = 26.3 bits (13), Expect(4) = 3e-13
Identities = 13/13 (100%)
Strand = Plus / Plus


Query: 1749 atgataaaactat 1761
|||||||||||||
Sbjct: 1814 atgataaaactat 1826

Score = 40.1 bits (20), Expect(2) = 0.12
Identities = 32/36 (88%)
Strand = Plus / Plus


Query: 1878 caattaaaatttgggatttagaaacattaagatgta 1913
|||||||| ||||||||||| | | |||||||||||
Sbjct: 1583 caattaaagtttgggatttaaagaaattaagatgta 1618

Score = 40.1 bits (20), Expect(2) = 0.12
Identities = 32/36 (88%)
Strand = Plus / Plus


Query: 1398 caattaaagtttgggatttaaagaaattaagatgta 1433
|||||||| ||||||||||| | | |||||||||||
Sbjct: 2063 caattaaaatttgggatttagaaacattaagatgta 2098

Score = 38.2 bits (19), Expect(2) = 0.12
Identities = 22/23 (95%)
Strand = Plus / Plus


Query: 1838 atttgtgataaattattatttac 1860
||||||||||| |||||||||||
Sbjct: 1417 atttgtgataatttattatttac 1439

Score = 38.2 bits (19), Expect(2) = 0.12
Identities = 22/23 (95%)
Strand = Plus / Plus


Query: 1232 atttgtgataatttattatttac 1254
||||||||||| |||||||||||
Sbjct: 2023 atttgtgataaattattatttac 2045

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,312,760,412
Number of extensions: 144565870
Number of successful extensions: 11534587
Number of sequences better than 10.0: 2057
Length of query: 2107
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 2083
Effective length of database: 96,409,374,237
Effective search space: 200820726535671
Effective search space used: 200820726535671
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.27
Homology vs Protein
Query= Contig-U16302-1 (Contig-U16302-1Q) /CSM_Contig/Contig-U16302-1Q.Seq.d
(2107 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q4QQW4) RecName: Full=Histone deacetylase 1; Short=HD1... 211 3e-94
U80780_1(U80780|pid:none) Mus musculus putative histone deacetyl... 211 3e-94
(Q13547) RecName: Full=Histone deacetylase 1; Short=HD1... 211 9e-94
AB451297_1(AB451297|pid:none) Homo sapiens HDAC1 mRNA for histon... 211 3e-93
AF043328_1(AF043328|pid:none) Gallus gallus histone deacetylase ... 211 4e-93
AY893466_1(AY893466|pid:none) Synthetic construct Homo sapiens c... 211 4e-92
(Q94517) RecName: Full=Histone deacetylase Rpd3; Short=... 207 6e-90
Y09258_1(Y09258|pid:none) D.melanogaster mRNA for putative histo... 207 3e-89
AF026949_1(AF026949|pid:none) Drosophila melanogaster putative h... 207 2e-88
FN357298_32(FN357298|pid:none) Schistosoma mansoni genome sequen... 205 9e-85
AF163862_1(AF163862|pid:none) Aspergillus nidulans histone deace... 204 2e-82
BT064956_1(BT064956|pid:none) Zea mays full-length cDNA clone ZM... 201 4e-82
AM920433_385(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 197 3e-81
AF349677_1(AF349677|pid:none) Cochliobolus carbonum histone deac... 194 3e-80
CU633438_574(CU633438|pid:none) Podospora anserina genomic DNA c... 195 2e-79
CR954202_353(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 194 9e-79
GM754344_1(GM754344|pid:none) Sequence 37 from Patent WO20081168... 188 9e-79
AF495526_1(AF495526|pid:none) Ustilago maydis histone deacetylas... 196 1e-78
(Q8H0W2) RecName: Full=Histone deacetylase 9; EC=3.5.1.... 189 3e-78
GM754350_1(GM754350|pid:none) Sequence 43 from Patent WO20081168... 188 2e-77
CR855107_12(CR855107|pid:none) Oryza sativa (indica cultivar-gro... 187 5e-77
CR380948_54(CR380948|pid:none) Candida glabrata strain CBS138 ch... 196 3e-76
CR382131_937(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 196 4e-76
AF440226_1(AF440226|pid:none) Zea mays histone deacetylase (HDA1... 187 4e-76
GM754356_1(GM754356|pid:none) Sequence 49 from Patent WO20081168... 187 4e-76
AL138652_8(AL138652|pid:none) Arabidopsis thaliana DNA chromosom... 182 7e-76
AC150566_19(AC150566|pid:none) Medicago truncatula clone mth2-21... 188 3e-75
AP008210_738(AP008210|pid:none) Oryza sativa (japonica cultivar-... 180 6e-75
(P32561) RecName: Full=Histone deacetylase RPD3; EC=3.5... 191 6e-74
EU097548_1(EU097548|pid:none) Anopheles gambiae isolate 162 hist... 207 6e-74
AM910989_228(AM910989|pid:none) Plasmodium knowlesi strain H chr... 184 5e-73
AF377895_1(AF377895|pid:none) Candida albicans histone deacetyla... 186 2e-71
AM474004_1(AM474004|pid:none) Vitis vinifera contig VV78X092498.... 185 6e-69
CP000497_98(CP000497|pid:none) Pichia stipitis CBS 6054 chromoso... 183 7e-69
CP001329_162(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 189 9e-69
CR954202_217(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 189 4e-66
CP000582_235(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 187 1e-63
AY779022_1(AY779022|pid:none) Entamoeba histolytica histone deac... 170 2e-62
CR382129_224(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 171 2e-62
AL731641_23(AL731641|pid:none) Oryza sativa (japonica cultivar-g... 138 3e-62
EU020779_1(EU020779|pid:none) Lithobius forticatus clone Lfo3136... 214 4e-62
EU020786_1(EU020786|pid:none) Podura aquatica clone Paq3136f1 pu... 214 5e-62
CR382126_396(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 169 1e-61
EU020790_1(EU020790|pid:none) Tanystylum orbiculare clone Tor313... 212 2e-61
EU020783_1(EU020783|pid:none) Narceus americanus clone Nam3136f1... 213 2e-61
EU020780_1(EU020780|pid:none) Limulus polyphemus clone Lpo3136f1... 214 5e-61
CP000496_478(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 164 1e-60
EU020787_1(EU020787|pid:none) Speleonectes tulumensis clone Stu3... 210 1e-60
EU020782_1(EU020782|pid:none) Mastigoproctus giganteus clone Mga... 209 2e-60
AY738586_1(AY738586|pid:none) Giardia intestinalis histone deace... 169 7e-60
EU020788_1(EU020788|pid:none) Thulinius stephaniae clone Thul313... 205 2e-59
EU020793_1(EU020793|pid:none) Prodoxus quinquepunctellus clone P... 211 8e-59
EU020791_1(EU020791|pid:none) Antheraea paukstadtorum clone Apau... 211 8e-59
FM992690_67(FM992690|pid:none) Candida dubliniensis CD36 chromos... 161 1e-58
DQ653319_1(DQ653319|pid:none) Arabidopsis thaliana clone 0000017... 143 2e-58
X91837_7(X91837|pid:none) S.cerevisiae G1301, G1304, G1307, G131... 167 2e-57
FN392320_1321(FN392320|pid:none) Pichia pastoris GS115 chromosom... 149 4e-57
A55532(A55532) myosin-heavy-chain kinase (EC 2.7.1.129) A - slim... 222 5e-56
AF384032_1(AF384032|pid:none) Zea mays histone deacetylase HDA10... 218 5e-55
DQ656603_1(DQ656603|pid:none) Triticum aestivum histone deacetyl... 216 2e-54
CR926395_1(CR926395|pid:none) Xenopus tropicalis finished cDNA, ... 216 3e-54
(Q92769) RecName: Full=Histone deacetylase 2; Short=HD2... 216 3e-54
BC120419_1(BC120419|pid:none) Bos taurus histone deacetylase 2, ... 216 3e-54
AK097376_1(AK097376|pid:none) Homo sapiens cDNA FLJ40057 fis, cl... 216 3e-54
BC031055_1(BC031055|pid:none) Homo sapiens histone deacetylase 2... 216 3e-54
BC138517_1(BC138517|pid:none) Mus musculus histone deacetylase 2... 216 3e-54
(P70288) RecName: Full=Histone deacetylase 2; Short=HD2... 215 5e-54
BC090604_1(BC090604|pid:none) Xenopus tropicalis histone deacety... 215 5e-54
BT045315_1(BT045315|pid:none) Salmo salar clone ssal-rgf-518-100... 215 6e-54
AF506201_1(AF506201|pid:none) Danio rerio histone deaceytlase 1 ... 214 8e-54
BC085375_1(BC085375|pid:none) Danio rerio histone deacetylase 1,... 214 8e-54
EU020789_1(EU020789|pid:none) Triops longicaudatus clone Tlo3136... 214 8e-54
BT045209_1(BT045209|pid:none) Salmo salar clone ssal-rgf-514-359... 214 8e-54
AF411956_6(AF411956|pid:none) Takifugu rubripes lck gene locus, ... 214 8e-54
BC064650_1(BC064650|pid:none) Danio rerio histone deacetylase 1,... 214 8e-54
BC054208_1(BC054208|pid:none) Xenopus laevis similar to histone ... 214 1e-53
U31814_1(U31814|pid:none) Human transcriptional regulator homolo... 214 1e-53
BT060632_1(BT060632|pid:none) Zea mays full-length cDNA clone ZM... 213 2e-53
AK296856_1(AK296856|pid:none) Homo sapiens cDNA FLJ56456 complet... 213 3e-53
BT076364_1(BT076364|pid:none) Caligus rogercresseyi clone crog-e... 212 5e-53
AF332875_1(AF332875|pid:none) Oryza sativa histone deacetylase H... 211 7e-53
AC121239_9(AC121239|pid:none) Medicago truncatula clone mth1-8p1... 211 7e-53
BC041296_1(BC041296|pid:none) Xenopus laevis similar to histone ... 211 1e-52
(O42227) RecName: Full=Probable histone deacetylase 1-B; ... 211 1e-52
(Q91695) RecName: Full=Probable histone deacetylase 1-A; ... 209 2e-52
AF513383_1(AF513383|pid:none) Oryza sativa (japonica cultivar-gr... 209 3e-52
AP008208_709(AP008208|pid:none) Oryza sativa (japonica cultivar-... 209 3e-52
AP003300_2(AP003300|pid:none) Oryza sativa Japonica Group genomi... 144 4e-51
EU332972_1(EU332972|pid:none) Picea abies histone deacetylase HD... 204 1e-50
AF014824_1(AF014824|pid:none) Arabidopsis thaliana histone deace... 203 2e-50
AF195548_1(AF195548|pid:none) Arabidopsis thaliana putative hist... 202 3e-50
EU502911_1(EU502911|pid:none) Arabidopsis thaliana ecotype Lands... 202 3e-50
GQ253431_1(GQ253431|pid:none) Brassica rapa subsp. pekinensis hi... 202 4e-50
(O17695) RecName: Full=Histone deacetylase 1; EC=3.5.1.... 201 1e-49
CU074270_1(CU074270|pid:none) Podospora anserina genomic DNA, NW... 199 3e-49
AF282858_1(AF282858|pid:none) Mesembryanthemum crystallinum hist... 199 4e-49
AL953881_1(AL953881|pid:none) Zebrafish DNA sequence from clone ... 198 8e-49
AX722159_1(AX722159|pid:none) Sequence 17 from Patent WO03024999... 198 8e-49
(Q969H0) RecName: Full=F-box/WD repeat-containing protein 7; Alt... 198 8e-49
AK223449_1(AK223449|pid:none) Homo sapiens mRNA for F-box protei... 198 8e-49
AF383178_1(AF383178|pid:none) Homo sapiens F-box protein FBX30 m... 198 8e-49
CR860672_1(CR860672|pid:none) Pongo abelii mRNA; cDNA DKFZp459M2... 197 1e-48
CR859650_1(CR859650|pid:none) Pongo abelii mRNA; cDNA DKFZp459C1... 196 2e-48
FN392319_893(FN392319|pid:none) Pichia pastoris GS115 chromosome... 196 3e-48
CP001324_335(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 196 3e-48
BC037320_1(BC037320|pid:none) Homo sapiens F-box and WD-40 domai... 196 3e-48
(P56519) RecName: Full=Histone deacetylase 2; Short=HD2... 196 4e-48
AC147877_10(AC147877|pid:none) Medicago truncatula clone mth2-9b... 195 5e-48
CR382138_101(CR382138|pid:none) Debaryomyces hansenii strain CBS... 195 5e-48
AF164342_1(AF164342|pid:none) Aspergillus nidulans histone deace... 144 5e-48
CR382125_80(CR382125|pid:none) Kluyveromyces lactis strain NRRL ... 195 6e-48
CP000492_814(CP000492|pid:none) Chlorobium phaeobacteroides DSM ... 194 8e-48
(Q09440) RecName: Full=Putative histone deacetylase 2; ... 146 9e-48
DQ004745_1(DQ004745|pid:none) Toxoplasma gondii histone deacetyl... 194 1e-47
AF306507_1(AF306507|pid:none) Cochliobolus carbonum putative his... 145 1e-47
BC073234_1(BC073234|pid:none) Xenopus laevis MGC80565 protein, m... 137 1e-47
FM992690_654(FM992690|pid:none) Candida dubliniensis CD36 chromo... 193 2e-47
AF071559_1(AF071559|pid:none) Drosophila melanogaster histone de... 193 2e-47
AE014297_253(AE014297|pid:none) Drosophila melanogaster chromoso... 193 2e-47
AK032174_1(AK032174|pid:none) Mus musculus adult male olfactory ... 193 2e-47
BC161282_1(BC161282|pid:none) Xenopus tropicalis hypothetical pr... 138 3e-47
EU446822_1(EU446822|pid:none) Synthetic construct Homo sapiens c... 137 6e-47
BC050433_1(BC050433|pid:none) Homo sapiens histone deacetylase 8... 137 6e-47
CU633453_76(CU633453|pid:none) Podospora anserina genomic DNA ch... 191 7e-47
(Q4SFA0) RecName: Full=Histone deacetylase 3; Short=HD3... 191 1e-46
BT044981_1(BT044981|pid:none) Salmo salar clone ssal-rgf-508-383... 191 1e-46
(Q803C3) RecName: Full=Histone deacetylase 3; Short=HD3... 190 2e-46
BC070873_1(BC070873|pid:none) Xenopus laevis Histone deacetylase... 190 2e-46
AF245664_1(AF245664|pid:none) Homo sapiens histone deacetylase 8... 135 2e-46
U75696_1(U75696|pid:none) Human transcription regulator RPD3-2A ... 189 5e-46
AF005482_1(AF005482|pid:none) Homo sapiens histone deacetylase-3... 189 5e-46
AF321131_1(AF321131|pid:none) Rattus norvegicus histone deacetyl... 189 5e-46
(P56520) RecName: Full=Histone deacetylase 3; Short=HD3... 189 5e-46
JC5834(JC5834) histone deacetylase (EC 3.5.1.-) 3 - human &U669... 189 5e-46
(Q8VH37) RecName: Full=Histone deacetylase 8; Short=HD8... 135 5e-46
(Q6P6W3) RecName: Full=Histone deacetylase 3; Short=HD3... 188 6e-46
(O88895) RecName: Full=Histone deacetylase 3; Short=HD3... 188 6e-46
AF125536_1(AF125536|pid:none) Mus musculus histone deacetylase-3... 188 6e-46
AF323585_1(AF323585|pid:none) Podospora anserina beta transducin... 188 8e-46
AK111861_1(AK111861|pid:none) Oryza sativa Japonica Group cDNA c... 187 1e-45
AF139991_1(AF139991|pid:none) Cryptosporidium parvum histone dea... 187 2e-45
AF098295_1(AF098295|pid:none) Mus musculus histone deacetylase 3... 186 2e-45
CP001037_1914(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 186 3e-45
AY736125_1(AY736125|pid:none) Triticum aestivum histone deacetyl... 186 4e-45
BC120257_1(BC120257|pid:none) Bos taurus histone deacetylase 8, ... 131 7e-45
CR940348_907(CR940348|pid:none) Theileria annulata strain Ankara... 184 9e-45
CP001324_582(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 184 1e-44
BX648055_1(BX648055|pid:none) Homo sapiens mRNA; cDNA DKFZp686H1... 141 1e-44
AP008217_449(AP008217|pid:none) Oryza sativa (japonica cultivar-... 143 2e-44
AE017348_36(AE017348|pid:none) Cryptococcus neoformans var. neof... 183 2e-44
CP001037_4818(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 182 3e-44
(Q00808) RecName: Full=Vegetative incompatibility protein HET-E-... 182 6e-44
(Q9VZF4) RecName: Full=F-box/WD repeat-containing protein 7; Alt... 182 6e-44
AF323582_1(AF323582|pid:none) Podospora anserina beta transducin... 181 9e-44
AF323584_1(AF323584|pid:none) Podospora anserina beta transducin... 181 9e-44
CT005260_72(CT005260|pid:none) Leishmania major strain Friedlin,... 143 6e-43
EU789364_1(EU789364|pid:none) Leishmania donovani strain S1 hist... 141 2e-42
AM494958_74(AM494958|pid:none) Leishmania braziliensis chromosom... 139 8e-42
CU074274_1(CU074274|pid:none) Podospora anserina genomic DNA, NW... 174 1e-41
AF323583_1(AF323583|pid:none) Podospora anserina beta transducin... 174 1e-41
AF421892_1(AF421892|pid:none) Trypanosoma brucei histone deacety... 139 1e-41
AE016819_405(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 173 3e-41
AJ006592_1(AJ006592|pid:none) Cryptosporidium parvum sa20 gene a... 172 6e-41
EF103432_1(EF103432|pid:none) Haliotis discus discus histone dea... 171 1e-40
BA000045_1965(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 171 1e-40
CP000807_36(CP000807|pid:none) Cyanothece sp. ATCC 51142 linear ... 169 3e-40
AP009552_3821(AP009552|pid:none) Microcystis aeruginosa NIES-843... 168 6e-40
CP000589_46(CP000589|pid:none) Ostreococcus lucimarinus CCE9901 ... 167 1e-39
AP007163_34(AP007163|pid:none) Aspergillus oryzae RIB40 genomic ... 167 2e-39
(Q8MY12) RecName: Full=Myosin heavy chain kinase C; Sho... 167 2e-39
CU074316_1(CU074316|pid:none) Podospora anserina genomic DNA, NW... 165 5e-39
BA000045_4356(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 165 5e-39
CU640366_848(CU640366|pid:none) Podospora anserina genomic DNA c... 165 5e-39
CR954209_40(CR954209|pid:none) Ostreococcus tauri strain OTTH059... 164 9e-39
AE017343_207(AE017343|pid:none) Cryptococcus neoformans var. neo... 164 9e-39
CP000117_1553(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 164 1e-38
AI2493(AI2493) WD-repeat protein [imported] - Nostoc sp. (strain... 164 2e-38
CP000828_167(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 164 2e-38
CP001037_5630(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 163 2e-38
BC041725_1(BC041725|pid:none) Xenopus laevis ring finger and WD ... 162 6e-38
BC167907_1(BC167907|pid:none) Xenopus tropicalis cDNA clone MGC:... 162 6e-38
EU953405_1(EU953405|pid:none) Zea mays clone 1408025 unknown mRNA. 160 1e-37
AX961806_1(AX961806|pid:none) Sequence 17 from Patent WO03104277. 160 2e-37
(Q6Q0C0) RecName: Full=E3 ubiquitin-protein ligase TRAF7; ... 160 2e-37
AL136921_1(AL136921|pid:none) Homo sapiens mRNA; cDNA DKFZp586I0... 160 2e-37
BC161916_1(BC161916|pid:none) Rattus norvegicus Tnf receptor-ass... 160 2e-37
AX961804_1(AX961804|pid:none) Sequence 15 from Patent WO03104277. 160 2e-37
AK088431_1(AK088431|pid:none) Mus musculus 2 days neonate thymus... 160 2e-37
(Q922B6) RecName: Full=E3 ubiquitin-protein ligase TRAF7; ... 160 2e-37
BC005649_1(BC005649|pid:none) Mus musculus TNF receptor-associat... 160 2e-37
CP000117_2838(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 159 4e-37
AF276431_1(AF276431|pid:none) Tetrahymena thermophila histone de... 159 5e-37
CP000828_3726(CP000828|pid:none) Acaryochloris marina MBIC11017,... 159 5e-37
CP000117_2617(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 159 5e-37
FN314118_1(FN314118|pid:none) Schistosoma japonicum isolate Anhu... 158 7e-37
AF079447_1(AF079447|pid:none) Dictyostelium discoideum myosin he... 158 9e-37
AE1810(AE1810) WD-40 repeat protein [imported] - Nostoc sp. (str... 157 2e-36
CP000828_5861(CP000828|pid:none) Acaryochloris marina MBIC11017,... 157 2e-36
AP004039_25(AP004039|pid:none) Oryza sativa Japonica Group genom... 156 3e-36
CP001291_1144(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 156 3e-36
AM778957_201(AM778957|pid:none) Microcystis aeruginosa PCC 7806 ... 156 3e-36
CP001291_1208(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 155 4e-36
(P43033) RecName: Full=Platelet-activating factor acetylhydrolas... 155 7e-36
AK147793_1(AK147793|pid:none) Mus musculus melanocyte cDNA, RIKE... 154 1e-35
AM270143_18(AM270143|pid:none) Aspergillus niger contig An07c026... 154 1e-35
(Q9PTR5) RecName: Full=Platelet-activating factor acetylhydrolas... 154 1e-35
S36113(S36113)LIS-1 protein - human 154 2e-35
(P43034) RecName: Full=Platelet-activating factor acetylhydrolas... 154 2e-35
AM746676_3634(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 154 2e-35
BA000045_4351(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 154 2e-35
BT045543_1(BT045543|pid:none) Salmo salar clone ssal-rgf-524-224... 153 2e-35
(Q90ZL4) RecName: Full=Lissencephaly-1 homolog B; &AY032881_1(A... 153 2e-35
BT045765_1(BT045765|pid:none) Salmo salar clone ssal-rgf-530-312... 153 2e-35
AY813730_1(AY813730|pid:none) Schistosoma japonicum SJCHGC03853 ... 153 3e-35
AK167824_1(AK167824|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 153 3e-35
(Q9GL51) RecName: Full=Platelet-activating factor acetylhydrolas... 152 4e-35
(Q5REG7) RecName: Full=Platelet-activating factor acetylhydrolas... 152 4e-35
(Q803D2) RecName: Full=Lissencephaly-1 homolog B; &BC044530_1(B... 152 4e-35
AB014596_1(AB014596|pid:none) Homo sapiens mRNA for KIAA0696 pro... 152 6e-35
(Q9UKB1) RecName: Full=F-box/WD repeat-containing protein 11; Al... 152 6e-35
AJ721075_1(AJ721075|pid:none) Gallus gallus mRNA for hypothetica... 152 6e-35
AB033279_1(AB033279|pid:none) Homo sapiens BTRCP2 mRNA for F-box... 152 6e-35
AB093260_1(AB093260|pid:none) Mus musculus mRNA for mKIAA0696 pr... 151 8e-35
BC034261_1(BC034261|pid:none) Mus musculus F-box and WD-40 domai... 151 8e-35
AK149139_1(AK149139|pid:none) Mus musculus 2 days neonate sympat... 151 8e-35
T22703(T22703)hypothetical protein F55B12.3 - Caenorhabditis ele... 151 1e-34
(Q93794) RecName: Full=F-box/WD repeat-containing protein sel-10... 151 1e-34
L13387_1(L13387|pid:none) Homo sapiens (clone 6-1) Miller-Dieker... 151 1e-34
CP001037_1432(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 151 1e-34
T16607(T16607)hypothetical protein K10B2.1 - Caenorhabditis eleg... 150 1e-34
CP000117_5003(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 150 2e-34
BA000045_2888(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 150 2e-34
(Q8YTC2) RecName: Full=Uncharacterized WD repeat-containing prot... 150 2e-34
AF032878_1(AF032878|pid:none) Drosophila melanogaster Slimb (sli... 149 3e-34
CR749295_1(CR749295|pid:none) Homo sapiens mRNA; cDNA DKFZp781N0... 149 4e-34
AK295870_1(AK295870|pid:none) Homo sapiens cDNA FLJ54002 complet... 149 4e-34
BC123621_1(BC123621|pid:none) Bos taurus beta-transducin repeat ... 149 4e-34
AF129530_1(AF129530|pid:none) Homo sapiens chromosome 10 F-box p... 149 4e-34
(Q91854) RecName: Full=Beta-TrCP; AltName: Full=Beta-transducin ... 149 4e-34
AB169034_1(AB169034|pid:none) Macaca fascicularis testis cDNA, c... 149 4e-34
AK313417_1(AK313417|pid:none) Homo sapiens cDNA, FLJ93955, highl... 149 5e-34
CP001037_1323(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 149 5e-34
BC056809_1(BC056809|pid:none) Danio rerio F-box and WD-40 domain... 148 7e-34
BC045356_1(BC045356|pid:none) Danio rerio F-box and WD-40 domain... 148 7e-34
AP009552_6258(AP009552|pid:none) Microcystis aeruginosa NIES-843... 148 9e-34
AF098070_1(AF098070|pid:none) Drosophila melanogaster Lis1 homol... 148 9e-34
(Q7KNS3) RecName: Full=Lissencephaly-1 homolog; Short=L... 148 9e-34
CP000117_4826(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 147 1e-33
EU652317_4(EU652317|pid:none) Philodina roseola GTP binding prot... 147 1e-33
AY038079_1(AY038079|pid:none) Mus musculus F-box/WD40 repeat-con... 147 2e-33
(Q4P9P9) RecName: Full=Nuclear distribution protein PAC1; AltNam... 147 2e-33
BC085125_1(BC085125|pid:none) Rattus norvegicus beta-transducin ... 147 2e-33
AM270005_42(AM270005|pid:none) Aspergillus niger contig An02c010... 147 2e-33
AK156660_1(AK156660|pid:none) Mus musculus activated spleen cDNA... 147 2e-33
AF081887_1(AF081887|pid:none) Mus musculus ubiquitin ligase FWD1... 147 2e-33
AF112979_1(AF112979|pid:none) Mus musculus beta-transducin repea... 147 2e-33
CP000117_2804(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 147 2e-33
AH2195(AH2195) hypothetical protein alr3119 [imported] - Nostoc ... 147 2e-33
AM778958_177(AM778958|pid:none) Microcystis aeruginosa PCC 7806 ... 146 3e-33
AP007175_262(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 146 3e-33
AM920435_1436(AM920435|pid:none) Penicillium chrysogenum Wiscons... 145 6e-33
CP000113_4019(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 145 6e-33
(Q8I0F4) RecName: Full=Lissencephaly-1 homolog; AltName: Full=Dd... 145 6e-33
AG2400(AG2400) WD-repeat protein [imported] - Nostoc sp. (strain... 145 8e-33
CU928176_715(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 145 8e-33
CR382126_1174(CR382126|pid:none) Kluyveromyces lactis strain NRR... 144 1e-32
AF339101_1(AF339101|pid:none) Heterodera glycines beta-transduci... 144 1e-32
(Q61FW2) RecName: Full=F-box/WD repeat-containing protein sel-10... 144 2e-32
AK147309_1(AK147309|pid:none) Mus musculus adult male brain UNDE... 144 2e-32
L25109_1(L25109|pid:none) Mus musculus LIS mRNA, partial cds. 144 2e-32
CP000117_4653(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 143 2e-32
CP000119_130(CP000119|pid:none) Anabaena variabilis ATCC 29413 p... 143 3e-32
AP007159_390(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 142 6e-32
AL590451_69(AL590451|pid:none) chromosome IX of strain GB-M1 of ... 141 8e-32
AC159435_6(AC159435|pid:none) Trypanosoma brucei chromosome 8 cl... 140 1e-31
CP000117_1538(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 140 2e-31
AL109945_2(AL109945|pid:none) Human DNA sequence from clone RP4-... 140 2e-31
AB076893_1(AB076893|pid:none) Ciona intestinalis Ci-betaTrCP mRN... 140 2e-31
CU928165_162(CU928165|pid:none) Kluyveromyces thermotolerans str... 140 2e-31
(P87053) RecName: Full=F-box/WD repeat-containing protein pof1; ... 140 2e-31
CP001037_247(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 140 2e-31
CP001099_1375(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 139 3e-31
DQ647383_1(DQ647383|pid:none) Chlamydomonas reinhardtii lissence... 139 3e-31
CR382136_634(CR382136|pid:none) Debaryomyces hansenii strain CBS... 139 3e-31
CP000828_20(CP000828|pid:none) Acaryochloris marina MBIC11017, c... 139 3e-31
(Q9NDC9) RecName: Full=Lissencephaly-1 homolog; AltName: Full=Pr... 139 4e-31
CP000828_160(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 139 5e-31
AM920437_209(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 138 9e-31
CP000117_2488(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 138 9e-31
FN392320_711(FN392320|pid:none) Pichia pastoris GS115 chromosome... 138 9e-31
CP000686_859(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 137 1e-30
S19487(S19487;S26657)hypothetical protein YCR072c - yeast (Sacch... 137 2e-30
CU633895_601(CU633895|pid:none) Podospora anserina genomic DNA c... 137 2e-30
(P25382) RecName: Full=WD repeat-containing protein YCR072C; &A... 137 2e-30
CP001037_1143(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 136 4e-30
CP000117_3846(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 136 4e-30
CP000393_3212(CP000393|pid:none) Trichodesmium erythraeum IMS101... 135 5e-30
FM992688_103(FM992688|pid:none) Candida dubliniensis CD36 chromo... 135 6e-30
CR382128_375(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 135 6e-30
AM746676_8405(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 134 1e-29
AP009552_1527(AP009552|pid:none) Microcystis aeruginosa NIES-843... 134 2e-29
CP000839_340(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 133 2e-29
CP001344_1900(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 133 3e-29
AF165818_151(AF165818|pid:none) Guillardia theta nucleomorph chr... 132 4e-29
CP001037_1497(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 132 4e-29
FN357920_1(FN357920|pid:none) Schistosoma mansoni genome sequenc... 132 4e-29
CP001037_5275(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 132 7e-29
CP001291_2528(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 132 7e-29
AM502242_105(AM502242|pid:none) Leishmania infantum chromosome 24. 109 8e-29
AY089600_1(AY089600|pid:none) Drosophila melanogaster RE19540 fu... 131 9e-29
(Q9D994) RecName: Full=WD repeat-containing protein 38; &AK0072... 131 1e-28
AM989989_35(AM989989|pid:none) Zygosaccharomyces rouxii strain C... 131 1e-28
CP000839_311(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 130 1e-28
(P39014) RecName: Full=F-box protein MET30; AltName: Full=Methio... 130 1e-28
L26505_1(L26505|pid:none) Saccharomyces cerevisiae Met30p gene, ... 130 1e-28
CP001037_4354(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 130 2e-28
CP001328_404(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 130 3e-28
(Q01277) RecName: Full=Sulfur controller 2; Short=SCON2... 130 3e-28
CT005263_136(CT005263|pid:none) Leishmania major strain Friedlin... 107 4e-28
CP000828_5917(CP000828|pid:none) Acaryochloris marina MBIC11017,... 129 4e-28
CU633900_125(CU633900|pid:none) Podospora anserina genomic DNA c... 129 6e-28
CP000842_108(CP000842|pid:none) Acaryochloris marina MBIC11017 p... 129 6e-28
AP007175_233(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 128 1e-27
CP000393_3924(CP000393|pid:none) Trichodesmium erythraeum IMS101... 128 1e-27
CP001037_148(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 127 1e-27
FM992695_153(FM992695|pid:none) Candida dubliniensis CD36 chromo... 127 2e-27
CP001344_3209(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 127 2e-27
CP000148_1200(CP000148|pid:none) Geobacter metallireducens GS-15... 127 2e-27
(Q1LV15) RecName: Full=WD repeat-containing protein 69; &BC1244... 127 2e-27
(Q9LXN8) RecName: Full=Histone deacetylase 17; EC=3.5.1... 126 3e-27
AY812578_1(AY812578|pid:none) Schistosoma japonicum SJCHGC09556 ... 126 3e-27
BC124403_1(BC124403|pid:none) Danio rerio WD repeat domain 69, m... 126 3e-27
U21220_1(U21220|pid:none) Emericella nidulans sulfur metabolite ... 126 3e-27
BT041779_1(BT041779|pid:none) Zea mays full-length cDNA clone ZM... 126 4e-27
AE016818_604(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 125 5e-27
BA000045_2655(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 125 5e-27
(Q5JTN6) RecName: Full=WD repeat-containing protein 38; &AL3549... 125 6e-27
(Q7RY30) RecName: Full=Nuclear distribution protein pac-1a; AltN... 125 6e-27
CP000806_3916(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 125 8e-27
CP000393_1374(CP000393|pid:none) Trichodesmium erythraeum IMS101... 125 8e-27
(Q00659) RecName: Full=Sulfur metabolite repression control prot... 124 1e-26
AM778942_51(AM778942|pid:none) Microcystis aeruginosa PCC 7806 g... 124 1e-26
CR382138_317(CR382138|pid:none) Debaryomyces hansenii strain CBS... 124 1e-26
AF130111_1(AF130111|pid:none) Homo sapiens clone FLB6411 PRO1670... 124 2e-26
AF074882_1(AF074882|pid:none) Mus musculus strain C57BL/6J histo... 124 2e-26
AY504948_1(AY504948|pid:none) Bos taurus histone deacetylase 1 (... 114 2e-26
(Q0P593) RecName: Full=WD repeat-containing protein 69; &BC1203... 123 2e-26
BC085436_1(BC085436|pid:none) Danio rerio zgc:101778, mRNA (cDNA... 123 2e-26
CR382131_627(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 123 3e-26
BT053588_1(BT053588|pid:none) Medicago truncatula clone MTYFT1G-... 123 3e-26
(P07834) RecName: Full=Cell division control protein 4; AltName:... 122 4e-26
AY082605_1(AY082605|pid:none) Arabidopsis thaliana stomatal cyto... 122 5e-26
(Q5RE95) RecName: Full=WD repeat-containing protein 5B; &CR8576... 122 5e-26
(Q9D7H2) RecName: Full=WD repeat-containing protein 5B; &AK0092... 122 5e-26
CP000117_2178(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 122 7e-26
DQ151642_1(DQ151642|pid:none) Chlamydomonas reinhardtii WD repea... 121 1e-25
(P49695) RecName: Full=Probable serine/threonine-protein kinase ... 120 2e-25
CU928165_278(CU928165|pid:none) Kluyveromyces thermotolerans str... 120 2e-25
(Q5BK30) RecName: Full=WD repeat-containing protein 69; &BC0912... 120 2e-25
CP000477_1397(CP000477|pid:none) Methanosaeta thermophila PT, co... 109 2e-25
AY648817_1(AY648817|pid:none) Danio rerio pleiotropic regulator ... 120 3e-25
AF1890(AF1890) WD-repeat protein [imported] - Nostoc sp. (strain... 120 3e-25
AM920437_204(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 120 3e-25
AL592382_2(AL592382|pid:none) Pneumocystis carinii telomeric cos... 120 3e-25
CU928165_104(CU928165|pid:none) Kluyveromyces thermotolerans str... 119 3e-25
CP000839_184(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 119 4e-25
(Q8N136) RecName: Full=WD repeat-containing protein 69; &AC0730... 119 6e-25
(Q2UGU1) RecName: Full=Nuclear distribution protein nudF homolog; 119 6e-25
AK301861_1(AK301861|pid:none) Homo sapiens cDNA FLJ54195 complet... 119 6e-25
AK002149_1(AK002149|pid:none) Homo sapiens cDNA FLJ11287 fis, cl... 119 6e-25
CP000828_5196(CP000828|pid:none) Acaryochloris marina MBIC11017,... 118 8e-25
CP001037_139(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 118 8e-25
EU049596_1(EU049596|pid:none) Branchiostoma floridae Bf-TIR-NBAR... 118 1e-24
BC149991_1(BC149991|pid:none) Bos taurus katanin p80 (WD repeat ... 117 1e-24
CP001037_2838(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 117 1e-24
(Q8BG40) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 117 2e-24
AP007159_126(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 117 2e-24
(Q9BVA0) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 117 2e-24
AK010364_1(AK010364|pid:none) Mus musculus ES cells cDNA, RIKEN ... 117 2e-24
(Q86TI4) RecName: Full=WD repeat-containing protein 86; 117 2e-24
CP000806_2172(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 117 2e-24
AK031630_1(AK031630|pid:none) Mus musculus 13 days embryo male t... 117 2e-24
AY891382_1(AY891382|pid:none) Synthetic construct Homo sapiens c... 117 2e-24
AB070844_1(AB070844|pid:none) Aspergillus oryzae sconB gene for ... 117 2e-24
CP001390_2883(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 97 2e-24
CP000806_1073(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 117 2e-24
AY082798_1(AY082798|pid:none) Penicillium marneffei TupA protein... 117 2e-24
AM270009_6(AM270009|pid:none) Aspergillus niger contig An02c0140... 117 2e-24
CP001037_1947(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 116 3e-24
CP001291_3285(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 116 3e-24
AP007157_632(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 116 3e-24
AK098821_1(AK098821|pid:none) Homo sapiens cDNA FLJ25955 fis, cl... 116 4e-24
AJ011376_1(AJ011376|pid:none) Homo sapiens mRNA for hypothetical... 116 4e-24
AP009552_1750(AP009552|pid:none) Microcystis aeruginosa NIES-843... 116 4e-24
AP007169_1(AP007169|pid:none) Aspergillus oryzae RIB40 genomic D... 116 4e-24
(Q2KIG2) RecName: Full=WD repeat-containing protein 5; &BC11265... 116 4e-24
S62507(T38502;S62507) hypothetical trp-asp repeat-containing pro... 115 5e-24
(Q5FWQ6) RecName: Full=WD repeat-containing protein 69; &BC0892... 115 5e-24
AK144091_1(AK144091|pid:none) Mus musculus RCB-0559 K-1 . F1 cDN... 115 5e-24
(Q8H0T9) RecName: Full=Katanin p80 WD40 repeat-containing subuni... 115 5e-24
(Q6P2Y2) RecName: Full=WD repeat-containing protein 69; &BC0642... 115 5e-24
CP001089_506(CP001089|pid:none) Geobacter lovleyi SZ, complete g... 99 5e-24
AK016201_1(AK016201|pid:none) Mus musculus adult male testis cDN... 115 6e-24
CP001037_6067(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 115 6e-24
BT075698_1(BT075698|pid:none) Osmerus mordax clone omor-rgc-001-... 115 6e-24
CP000089_3569(CP000089|pid:none) Dechloromonas aromatica RCB, co... 115 8e-24
AP007175_253(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 115 8e-24
(O43017) RecName: Full=Set1 complex component swd3; Sho... 114 1e-23
(Q922V4) RecName: Full=Pleiotropic regulator 1; &AK075993_1(AK0... 114 1e-23
BC084871_1(BC084871|pid:none) Xenopus laevis hypothetical LOC495... 114 1e-23
BC052124_1(BC052124|pid:none) Danio rerio WD repeat domain 5, mR... 114 1e-23
AF044334_1(AF044334|pid:none) Mus musculus pleiotropic regulator... 114 1e-23
CU928178_153(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 114 1e-23
BC084093_1(BC084093|pid:none) Xenopus laevis hypothetical LOC495... 114 1e-23
(Q7ZUV2) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 114 2e-23
(Q4WLM7) RecName: Full=Nuclear distribution protein nudF homolog; 114 2e-23
BC077273_1(BC077273|pid:none) Xenopus laevis cDNA clone IMAGE:40... 114 2e-23
AL953896_5(AL953896|pid:none) Zebrafish DNA sequence from clone ... 114 2e-23
AP004312_39(AP004312|pid:none) Synechocystis sp. PCC 6803 plasmi... 114 2e-23
(Q4V7Y7) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 114 2e-23
CP000117_173(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 114 2e-23
BC162672_1(BC162672|pid:none) Danio rerio coatomer protein compl... 114 2e-23
(O43660) RecName: Full=Pleiotropic regulator 1; &AF044333_1(AF0... 113 2e-23
AM270328_15(AM270328|pid:none) Aspergillus niger contig An15c001... 113 2e-23
FN357383_7(FN357383|pid:none) Schistosoma mansoni genome sequenc... 113 2e-23
BC020786_1(BC020786|pid:none) Homo sapiens pleiotropic regulator... 113 2e-23
AC1842(AC1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 113 2e-23
(Q2KID6) RecName: Full=Pleiotropic regulator 1; &BC112677_1(BC1... 113 2e-23
(Q9WUC8) RecName: Full=Pleiotropic regulator 1; &AF128241_1(AF1... 113 3e-23
BC077844_1(BC077844|pid:none) Xenopus laevis WD repeat domain 5,... 113 3e-23
AF052432_1(AF052432|pid:none) Homo sapiens katanin p80 subunit m... 113 3e-23
AY457171_1(AY457171|pid:none) Leishmania amazonensis antigenic W... 113 3e-23
CP000142_1773(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 96 3e-23
(Q5M786) RecName: Full=WD repeat-containing protein 5; &BC08100... 112 4e-23
AE014298_1819(AE014298|pid:none) Drosophila melanogaster chromos... 112 4e-23
AK313131_1(AK313131|pid:none) Homo sapiens cDNA, FLJ93619, highl... 112 4e-23
CP000393_3435(CP000393|pid:none) Trichodesmium erythraeum IMS101... 112 4e-23
AM746676_4559(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 112 4e-23
AD1842(AD1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 112 5e-23
CP001037_2020(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 112 5e-23
AY814155_1(AY814155|pid:none) Schistosoma japonicum SJCHGC06272 ... 112 5e-23
CP000393_1925(CP000393|pid:none) Trichodesmium erythraeum IMS101... 112 5e-23
(Q6NVM2) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 112 5e-23
CP000108_212(CP000108|pid:none) Chlorobium chlorochromatii CaD3,... 112 7e-23
CR760326_1(CR760326|pid:none) Xenopus tropicalis finished cDNA, ... 112 7e-23
AF016369_1(AF016369|pid:none) Homo sapiens U4/U6 small nuclear r... 112 7e-23
AL449305_7(AL449305|pid:none) Human DNA sequence from clone RP11... 112 7e-23
AM920427_459(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 112 7e-23
AJ252128_1(AJ252128|pid:none) Yarrowia lipolytica tup1 gene for ... 112 7e-23
CP000828_5338(CP000828|pid:none) Acaryochloris marina MBIC11017,... 112 7e-23
CR457105_1(CR457105|pid:none) Homo sapiens full open reading fra... 112 7e-23
CP000844_164(CP000844|pid:none) Acaryochloris marina MBIC11017 p... 112 7e-23
AK293918_1(AK293918|pid:none) Homo sapiens cDNA FLJ52123 complet... 111 9e-23
BC096500_1(BC096500|pid:none) Xenopus tropicalis hypothetical pr... 111 9e-23
CR380958_103(CR380958|pid:none) Candida glabrata strain CBS138 c... 111 9e-23
CP000686_3299(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 111 9e-23
AP007164_19(AP007164|pid:none) Aspergillus oryzae RIB40 genomic ... 111 9e-23
AG1889(AG1889) WD-40 repeat protein [imported] - Nostoc sp. (str... 111 1e-22
BC041755_1(BC041755|pid:none) Xenopus laevis coatomer protein co... 111 1e-22
U63922_1(U63922|pid:none) Xenopus laevis beta-transducin repeat ... 111 1e-22
EU579454_6(EU579454|pid:none) Brassica oleracea clone BAC B16J1,... 111 1e-22
BT086255_1(BT086255|pid:none) Zea mays full-length cDNA clone ZM... 111 1e-22
FN357341_7(FN357341|pid:none) Schistosoma mansoni genome sequenc... 111 1e-22
AP008207_1658(AP008207|pid:none) Oryza sativa (japonica cultivar... 110 2e-22
T19550(T19550;T20311) hypothetical protein D1054.15 - Caenorhabd... 110 2e-22
(P35606) RecName: Full=Coatomer subunit beta'; AltName: Full=Bet... 110 2e-22
(P35605) RecName: Full=Coatomer subunit beta'; AltName: Full=Bet... 110 2e-22
S35312(S35312;S39811) coatomer complex beta' chain - bovine &X7... 110 2e-22
(Q3MHE2) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 110 2e-22
CP000828_3398(CP000828|pid:none) Acaryochloris marina MBIC11017,... 110 2e-22
U63921_1(U63921|pid:none) Xenopus laevis beta-transducin repeat ... 110 2e-22
(O55029) RecName: Full=Coatomer subunit beta'; AltName: Full=Bet... 110 2e-22
(Q2KJJ5) RecName: Full=Transducin beta-like protein 3; &BC10531... 110 2e-22
EF083131_1(EF083131|pid:none) Picea sitchensis clone WS02722_J02... 110 2e-22
FN357325_1(FN357325|pid:none) Schistosoma mansoni genome sequenc... 110 2e-22
AL034560_19(AL034560|pid:none) Plasmodium falciparum MAL3P8, com... 110 2e-22
AK011064_1(AK011064|pid:none) Mus musculus 13 days embryo liver ... 110 2e-22
AY485643_1(AY485643|pid:none) Hordeum vulgare subsp. vulgare BAC... 110 3e-22
AE017343_599(AE017343|pid:none) Cryptococcus neoformans var. neo... 110 3e-22
(Q7S7L4) RecName: Full=Nuclear distribution protein pac-1b; AltN... 110 3e-22
CP000393_145(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 110 3e-22
AP009552_5491(AP009552|pid:none) Microcystis aeruginosa NIES-843... 110 3e-22
(Q0DYP5) RecName: Full=Zinc finger CCCH domain-containing protei... 110 3e-22
AB018110_4(AB018110|pid:none) Arabidopsis thaliana genomic DNA, ... 109 4e-22
AP007169_287(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 109 4e-22
(Q5ZIU8) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 109 4e-22
(Q9DAW6) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 109 4e-22
AM920431_458(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 109 4e-22
DQ410670_1(DQ410670|pid:none) Gallus gallus brain p80 katanin mR... 109 4e-22
CR382124_192(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 109 5e-22
EF085973_1(EF085973|pid:none) Picea sitchensis clone WS0293_P22 ... 109 5e-22
AK090114_1(AK090114|pid:none) Mus musculus RCB-1283 B16 melanoma... 109 5e-22
CR382131_1322(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 109 5e-22
BC135427_1(BC135427|pid:none) Xenopus tropicalis transducin (bet... 108 6e-22
AK043479_1(AK043479|pid:none) Mus musculus 7 days neonate cerebe... 108 6e-22
BC169090_1(BC169090|pid:none) Rattus norvegicus coatomer protein... 108 6e-22
(Q8CIE6) RecName: Full=Coatomer subunit alpha; AltName: Full=Alp... 108 6e-22
FN317489_1(FN317489|pid:none) Schistosoma japonicum isolate Anhu... 108 6e-22
AB179215_1(AB179215|pid:none) Macaca fascicularis testis cDNA cl... 108 6e-22
(Q27954) RecName: Full=Coatomer subunit alpha; AltName: Full=Alp... 108 6e-22

>(Q4QQW4) RecName: Full=Histone deacetylase 1; Short=HD1;
EC=3.5.1.98; &BC097943_1(BC097943|pid:none)
&BC107476_1(BC107476|pid:none)
Length = 482

Score = 211 bits (537), Expect(2) = 3e-94
Identities = 90/125 (72%), Positives = 114/125 (91%)
Frame = +2

Query: 2 KHHERLLYIDIDIHHGDGVEDAFYTTDRVMTVSFHKYGDYFPGTGDVKDIGADKGKYYSL 181
K+H+R+LYIDIDIHHGDGVE+AFYTTDRVMTVSFHKYG+YFPGTGD++DIGA KGKYY++
Sbjct: 165 KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAV 224

Query: 182 NFPLKDGIDDESYQSIFRPIIRSVMDFYRPGAVVIQCGADSLTGDRLGCFNLTLRGHAPM 361
N+PL+DGIDDESY++IF+P++ VM+ ++P AVV+QCG+DSL+GDRLGCFNLT++GHA
Sbjct: 225 NYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKC 284

Query: 362 YRIFK 376
K
Sbjct: 285 VEFVK 289

Score = 160 bits (404), Expect(2) = 3e-94
Identities = 78/154 (50%), Positives = 106/154 (68%), Gaps = 3/154 (1%)
Frame = +3

Query: 357 QCIEFLKSFNVPLVVLGGGGYTIKNVARCWTYETSILVDSELKDELPYNDYLEYYGPEYR 536
+C+EF+KSFN+P+++LGGGGYTI+NVARCWTYET++ +D+E+ +ELPYNDY EY+GP+++
Sbjct: 283 KCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFK 342

Query: 537 LHITPNNMENQNTKDYLEKLKIQLLENLRNLNXXXXXXXXXXXXXSF-NYSXXXXXXXXX 713
LHI+P+NM NQNT +YLEK+K +L ENLR L + S
Sbjct: 343 LHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEEDPD 402

Query: 714 VRISEADRDKKVHHQGELSDSDE--EDGRRNYSN 809
RIS DK++ + E SDSDE E GR+N SN
Sbjct: 403 KRISICSSDKRIACEEEFSDSDEEGEGGRKNSSN 436

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 2,968,528,823
Number of extensions: 58316410
Number of successful extensions: 218882
Number of sequences better than 10.0: 5213
Number of HSP's gapped: 179446
Number of HSP's successfully gapped: 15067
Length of query: 702
Length of database: 1,061,185,681
Length adjustment: 136
Effective length of query: 566
Effective length of database: 616,676,753
Effective search space: 349039042198
Effective search space used: 349039042198
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.90 gvh: 0.44 alm: 0.45 top: 0.40 tms: 0.00 mit: 0.31 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: cytoplasmic
32.0 %: nuclear
8.0 %: mitochondrial
8.0 %: vesicles of secretory system
8.0 %: endoplasmic reticulum
4.0 %: cytoskeletal

>> prediction for Contig-U16302-1 is cyt

VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 2
SL (DIR, L) 0
SS (DIR, S) 3
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 0