Contig-U16277-1
Contig ID Contig-U16277-1
Contig update 2004. 6.11
Contig sequence
>Contig-U16277-1 (Contig-U16277-1Q) /CSM_Contig/Contig-U16277-1Q.Seq.d
GGTGATACATTTTTAGTAACTCCTCCAACCAAATTTCATACACATTTCCG
TTTATATAGAAATGGTTTTGATGTTATAAATAATGATGAATTTAATTTTA
CAAAAGATGGTTATTTTAAGAGTAAAGGTATTGGAAGTTATCTCTTGTGT
TTTAGTTGTCGGTTTACCATATATTTTATACAAAGAGTCTGTAATGAATA
AGGATGAATGTGTTATTGATGTTGTAAATGATAAAGTTATTGAATGTGGT
TTAAACAGAAGATCAAGATCACCATCACCAGAAAAAGAAGAACCAGAACA
ACCACAAGAACCAGAAATTCATCCACATTTACTTTTCCATTTACAATATC
AACAACAATTACAATTAGAACAACAACAACAACAATTACAATTACAACAA
CAACAGTTACAACCAACAACAATTACAACAACAACAACAATTACAACAAC
CACAACAAGTTCAATATTGAACCTCGTATCAGTTTATTCATCCCTTCTTC
TCCTCCTTTCCTCTCCCATTACAAATTTTCCTATTGGAATGTATTTTTAA
AAATAATAATAATAATAATAGTAATAATAATAATAATAATAATGATAATA
ATAATAATAGTAATAATAATAATTTTAGCCGATAAATAATATTAAAAAAA
CTCTCAGTAATCATTATACCAATAAGTAATAATATTATCAGTAAAATAAT
TTTGTAATATTTAGCCAACTTAAATCAAACTAAAAACAATTAAAATCAAA
CCTCAAATTTTTTTATAGATTTATTTATTTTCTCAACCAATCAATCAATA
AACTACAAATTTATAATATAGATATTTTTTCGAAATAATGACTTCTCCAG
CAACAAATAAATCAGCAGCCTACGATTATTTAATTAAATTACTTTTAATC
GGTGATAGTGGTGTAGGTAAATCATGTCTTTTATTACGTTTTTCTGAAGA
TTCTTTCACACCAAGTTTCATCACTACTATTGGTATCGATTTCAAAATTC
GTACAATTGAATTGGAAGGTAAAAGAATTAAATTACAAATTTGGGATACT
GCAGGTCAAGAAAGATTCAGAACTATCACTACAGCATACTATCGTGGTGC
TATGGGTATCCCTATTGGTTTATGATGTCACTGATGAAAAATCTTTTGGT
AACATTAGAAATTGGATTAGAAATATCGAGGCAACATGCTACAGACTCTG
TTAATAAAATGTTAACCGGTAATAAATGTGATATGCCCGAAAAGAAAGTT
GTTGATAGCTCAAGAGGTAAATCACTTGCAGACGAATATGGTATTAAATT
TTTAGAAACCTCAGCCAAAAACAGTATAAATGTAGAGGAAGCCTTTATTA
GTTTAGCAAAAGATATTAAAAAACGTATGATTGATACACCAAATGAACAA
CCACAAGTTGTTCAACCAGGTACAAATCTTGGTGCAAATAACAATAAGAA
AAAAGCTTGTTGTTAAATTGGGTGCTATTTTAATTTTCACATTATATTAT
TAGATAAAAATAAAAAAAAAAAAAAAAATCTTAAAAAAAAAAAAAAAAGT
CATCAAAATTATTCACCTAAAAACATAACATATAAACCCTCGGTTTCAAG
GCAGAGGATGATTCACTTACAACAACAACAACAACAACCAACAACAACAA
CAACAACCAACAACAACAACTAACAACAACAACAAATAATAATAATAATA
AAAATAATAATAATAAATCCCCAATTGTGAAGTTGTGTTGAAATTAATAA
GCAGTGGGAGGTTTATATCGCATCAATCACTTTTTCCTTTTCCTCAACTT
CATATATAAAAAAAAGAAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAATA
ATAAAAAAAATAAAAAAATAATAAACAAATAAAAAAACAAAAAAAAAAAA
AAAAAAACAAAACTAAATTAATTAATTTATTATTAATAATGT

Gap no gap
Contig length 1942
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 57
Number of EST 59
Link to clone list U16277
List of clone(s)

est1=SLK819E,-11,345
est2=SSD445F,1,635
est3=VSF884Z,88,580
est4=SSE440E,90,663
est5=VSB640Z,267,695
est6=SSI518F,307,785
est7=SSF346Z,387,718
est8=SSD523E,402,1147
est9=SSK334E,480,1535
est10=AFJ655F,601,1193
est11=VFE469F,611,1202
est12=AFN511F,615,1200
est13=VFK248F,620,1212
est14=SLF474F,634,976
est15=CFB125F,667,1106
est16=VFJ353F,670,1101
est17=SSC149F,700,1368
est18=SSB250F,726,1242
est19=VFH706Z,739,1252
est20=SSJ849F,742,1257
est21=SSE658Z,815,1460
est22=SSC355Z,821,1540
est23=SSK733Z,823,1460
est24=SSB365E,827,1525
est25=SSJ303Z,829,1543
est26=AFK614Z,848,1233
est27=SFE866Z,860,1274
est28=SFI634Z,868,1270
est29=AFN602Z,877,1177
est30=SSI803Z,884,1484
est31=SSM526Z,886,1458
est32=SSF625Z,892,1484
est33=VFB778Z,896,1237
est34=SSH118Z,905,1543
est35=SSJ334Z,906,1554
est36=SSG645Z,911,1497
est37=SSB671Z,926,1544
est38=SSI427Z,944,1502
est39=VSJ608Z,945,1458
est40=SSH729F,946,1266
est41=SSG832E,953,1557
est42=SSA481F,971,1498
est43=SSA350Z,974,1563
est44=VFE250Z,974,1214
est45=VFG145Z,1012,1154
est46=SSB339Z,1067,1509
est47=SSC890E,1130,1580
est48=SSI731Z,1170,1594
est49=SSI487F,1227,1713
est50=SSG134Z,1247,1543
est51=SSD235F,1300,1515
est52=SLF474Z,1354,1830
est53=SSC862E,1607,1891
est54=SSC871F,1607,1891
est55=SSB864F,1626,1881
est56=VFE750Z,1631,1801
est57=SLC551F,1643,1920
est58=VFC259Z,1662,1766
est59=SSI487Z,1704,1942
Translated Amino Acid sequence
vihf**llqpnfihisvyiemvlml*IMMNLILQKMVILRVKVLEVISCVLVVGLPYILY
KESVMNKDECVIDVVNDKVIECGLNRRSRSPSPEKEEPEQPQEPEIHPHLLFHLQYQQQL
QLEQQQQQLQLQQQQLQPTTITTTTTITTTTTSSILNLVSVYSSLLLLLSSPITNFPIGM
YF*k***********************f*pinnikktlsnhytnk**yyq*nnfvifsql
ksn*kqlksnlkffyrfiyflnqsinklqiynidifsk**llqqqinqqptii*lnyf*s
vivv*vnhvfyyvflkilshqvsslllvsiskfvqlnwkvkelnykfgilqvkkdselsl
qhtivvlwvsllvydvtdeksfgnirnwirnieatcyrlc**nvnr**m*yarkesc**l
kr*itcrriwy*ifrnlsqkqykcrgsly*fskry*ktyd*ytk*tttscstrykswck*
q*ekslllnwvlf*fshyiir*k*kkkkks*kkkkkssklft*khni*tlgfkaeddslt
ttttttnnnnnnqqqqlttttnnnnnknnnnkspivklc*n**avgglyrinhfflflnf
iykkkkkkkkkekkrnnkknkkiink*knkkkkkktkln*liyy**c


Translated Amino Acid sequence (All Frames)
Frame A:
gdtflvtpptkfhthfrlyrngfdvinndefnftkdgyfkskgigsyllcfscrftiyfi
qrvcne*g*mcy*cck**sy*mwfkqkikititrkrrtrtttrtrnsstftfpftistti
tirtttttitittttvttnnnynnnnnynnhnkfnieprislfipssppflshykfsywn
vflkiiiiiiviiiiiimiiiiiviiiiladk*y*knsq*slyq*viilsvk*fcni*pt
*iklktikikpqifl*iylfsqpinq*ttnl*yryffeimtspatnksaaydylikllli
gdsgvgksclllrfsedsftpsfittigidfkirtielegkriklqiwdtagqerfrtit
tayyrgamgipigl*ch**kifw*h*kld*kyrgnmlqtllikc*pvinvicpkrkllia
qevnhlqtnmvlnf*kpqpktv*m*rkpllv*qkilknv*lihqmnnhklfnqvqilvqi
tirkklvvklgailiftlyy*ikikkkkkilkkkkkvikiihlkt*hinprfqgrg*fty
nnnnnnqqqqqqpttttnnnnk*****k****ipncevvlklissgrfishqslfpfpql
hi*kkekkkkkrkkkk**kk*knnkqikkqkkkkknktklinlllim


Frame B:
vihf**llqpnfihisvyiemvlml*IMMNLILQKMVILRVKVLEVISCVLVVGLPYILY
KESVMNKDECVIDVVNDKVIECGLNRRSRSPSPEKEEPEQPQEPEIHPHLLFHLQYQQQL
QLEQQQQQLQLQQQQLQPTTITTTTTITTTTTSSILNLVSVYSSLLLLLSSPITNFPIGM
YF*k***********************f*pinnikktlsnhytnk**yyq*nnfvifsql
ksn*kqlksnlkffyrfiyflnqsinklqiynidifsk**llqqqinqqptii*lnyf*s
vivv*vnhvfyyvflkilshqvsslllvsiskfvqlnwkvkelnykfgilqvkkdselsl
qhtivvlwvsllvydvtdeksfgnirnwirnieatcyrlc**nvnr**m*yarkesc**l
kr*itcrriwy*ifrnlsqkqykcrgsly*fskry*ktyd*ytk*tttscstrykswck*
q*ekslllnwvlf*fshyiir*k*kkkkks*kkkkkssklft*khni*tlgfkaeddslt
ttttttnnnnnnqqqqlttttnnnnnknnnnkspivklc*n**avgglyrinhfflflnf
iykkkkkkkkkekkrnnkknkkiink*knkkkkkktkln*liyy**c


Frame C:
*yifsnssnqisytfpfi*kwf*cyk***i*fykrwlf*e*rywklslvf*lsvyhifyt
ksl**irmnvllml*mikllnvv*tedqdhhhqkkknqnnhknqkfihiyfsiyninnny
n*nnnnnnynynnnsynqqqlqqqqqlqqpqqvqy*tsyqfihpffssfplplqifllec
ifknnnnnnsnnnnnnndnnnnsnnnnfsr*iilkklsviiipisnniiskiil*ylanl
nqtknn*nqtsnffidlfifstnqsinykfii*iffrnndfssnk*isslrlfn*itfnr
**wcr*imsfitff*rffhtkfhhyywyrfqnsyn*igr*kn*itnlgycrsrkiqnyhy
silswcygypywfmmslmknllvtleigleisrqhatdsvnkmltgnkcdmpekkvvdss
rgksladeygikfletsaknsinveeafislakdikkrmidtpneqpqvvqpgtnlgann
nkkkacc*igcyfnfhiilldknkkkkknlkkkkkshqnyspknitykpsvsrqrmihlq
qqqqqpttttttnnnn*qqqqiiiiikiiiinpql*scveinkqwevyiasitfsfssts
yikkrkkkkkkkkkeiikkikk**tnkktkkkkkkqn*in*fiinn


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U16277-1 (Contig-U16277-1Q)
/CSM_Contig/Contig-U16277-1Q.Seq.d
(1942 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U16277-1 (Contig-U16277-1Q) /CSM_Contig/Conti... 1665 0.0
Contig-U14029-1 (Contig-U14029-1Q) /CSM_Contig/Conti... 163 1e-39
Contig-U11545-1 (Contig-U11545-1Q) /CSM_Contig/Conti... 155 3e-37
Contig-U12243-1 (Contig-U12243-1Q) /CSM_Contig/Conti... 100 2e-20
Contig-U12705-1 (Contig-U12705-1Q) /CSM_Contig/Conti... 94 1e-18
Contig-U16219-1 (Contig-U16219-1Q) /CSM_Contig/Conti... 80 1e-14
Contig-U15446-1 (Contig-U15446-1Q) /CSM_Contig/Conti... 76 2e-13
Contig-U10248-1 (Contig-U10248-1Q) /CSM_Contig/Conti... 60 1e-08
Contig-U04090-1 (Contig-U04090-1Q) /CSM_Contig/Conti... 56 2e-07
Contig-U14031-1 (Contig-U14031-1Q) /CSM_Contig/Conti... 50 1e-05

>Contig-U16277-1 (Contig-U16277-1Q) /CSM_Contig/Contig-U16277-1Q.Seq.d
Length = 1942

Score = 1665 bits (840), Expect = 0.0
Identities = 868/882 (98%)
Strand = Plus / Plus


Query: 624 tttagccgataaataatattnnnnnnnctctcagtaatcattataccaataagtaataat 683
|||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 624 tttagccgataaataatattaaaaaaactctcagtaatcattataccaataagtaataat 683


Query: 684 attatcagtaaaataattttgtaatatttagccaacttaaatcaaactaaaaacaattaa 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 attatcagtaaaataattttgtaatatttagccaacttaaatcaaactaaaaacaattaa 743


Query: 744 aatcaaacctcaaannnnnnnatagatttatttattttctcaaccaatcaatcaataaac 803
|||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aatcaaacctcaaatttttttatagatttatttattttctcaaccaatcaatcaataaac 803


Query: 804 tacaaatttataatatagatattttttcgaaataatgacttctccagcaacaaataaatc 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tacaaatttataatatagatattttttcgaaataatgacttctccagcaacaaataaatc 863


Query: 864 agcagcctacgattatttaattaaattacttttaatcggtgatagtggtgtaggtaaatc 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 agcagcctacgattatttaattaaattacttttaatcggtgatagtggtgtaggtaaatc 923


Query: 924 atgtcttttattacgtttttctgaagattctttcacaccaagtttcatcactactattgg 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 atgtcttttattacgtttttctgaagattctttcacaccaagtttcatcactactattgg 983


Query: 984 tatcgatttcaaaattcgtacaattgaattggaaggtaaaagaattaaattacaaatttg 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 tatcgatttcaaaattcgtacaattgaattggaaggtaaaagaattaaattacaaatttg 1043


Query: 1044 ggatactgcaggtcaagaaagattcagaactatcactacagcatactatcgtggtgctat 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 ggatactgcaggtcaagaaagattcagaactatcactacagcatactatcgtggtgctat 1103


Query: 1104 gggtatccctattggtttatgatgtcactgatgaaaaatcttttggtaacattagaaatt 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 gggtatccctattggtttatgatgtcactgatgaaaaatcttttggtaacattagaaatt 1163


Query: 1164 ggattagaaatatcgaggcaacatgctacagactctgttaataaaatgttaaccggtaat 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 ggattagaaatatcgaggcaacatgctacagactctgttaataaaatgttaaccggtaat 1223


Query: 1224 aaatgtgatatgcccgaaaagaaagttgttgatagctcaagaggtaaatcacttgcagac 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 aaatgtgatatgcccgaaaagaaagttgttgatagctcaagaggtaaatcacttgcagac 1283


Query: 1284 gaatatggtattaaatttttagaaacctcagccaaaaacagtataaatgtagaggaagcc 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 gaatatggtattaaatttttagaaacctcagccaaaaacagtataaatgtagaggaagcc 1343


Query: 1344 tttattagtttagcaaaagatattaaaaaacgtatgattgatacaccaaatgaacaacca 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1344 tttattagtttagcaaaagatattaaaaaacgtatgattgatacaccaaatgaacaacca 1403


Query: 1404 caagttgttcaaccaggtacaaatcttggtgcaaataacaataagaaaaaagcttgttgt 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 caagttgttcaaccaggtacaaatcttggtgcaaataacaataagaaaaaagcttgttgt 1463


Query: 1464 taaattgggtgctattttaattttcacattatattattagat 1505
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 taaattgggtgctattttaattttcacattatattattagat 1505


Score = 678 bits (342), Expect = 0.0
Identities = 342/342 (100%)
Strand = Plus / Plus


Query: 1 ggtgatacatttttagtaactcctccaaccaaatttcatacacatttccgtttatataga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgatacatttttagtaactcctccaaccaaatttcatacacatttccgtttatataga 60


Query: 61 aatggttttgatgttataaataatgatgaatttaattttacaaaagatggttattttaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatggttttgatgttataaataatgatgaatttaattttacaaaagatggttattttaag 120


Query: 121 agtaaaggtattggaagttatctcttgtgttttagttgtcggtttaccatatattttata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtaaaggtattggaagttatctcttgtgttttagttgtcggtttaccatatattttata 180


Query: 181 caaagagtctgtaatgaataaggatgaatgtgttattgatgttgtaaatgataaagttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaagagtctgtaatgaataaggatgaatgtgttattgatgttgtaaatgataaagttat 240


Query: 241 tgaatgtggtttaaacagaagatcaagatcaccatcaccagaaaaagaagaaccagaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaatgtggtttaaacagaagatcaagatcaccatcaccagaaaaagaagaaccagaaca 300


Query: 301 accacaagaaccagaaattcatccacatttacttttccattt 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 accacaagaaccagaaattcatccacatttacttttccattt 342


Score = 176 bits (89), Expect = 8e-44
Identities = 89/89 (100%)
Strand = Plus / Plus


Query: 459 gttcaatattgaacctcgtatcagtttattcatcccttcttctcctcctttcctctccca 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gttcaatattgaacctcgtatcagtttattcatcccttcttctcctcctttcctctccca 518


Query: 519 ttacaaattttcctattggaatgtatttt 547
|||||||||||||||||||||||||||||
Sbjct: 519 ttacaaattttcctattggaatgtatttt 547


Score = 176 bits (89), Expect = 8e-44
Identities = 89/89 (100%)
Strand = Plus / Plus


Query: 1719 ccccaattgtgaagttgtgttgaaattaataagcagtgggaggtttatatcgcatcaatc 1778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1719 ccccaattgtgaagttgtgttgaaattaataagcagtgggaggtttatatcgcatcaatc 1778


Query: 1779 actttttccttttcctcaacttcatatat 1807
|||||||||||||||||||||||||||||
Sbjct: 1779 actttttccttttcctcaacttcatatat 1807


Score = 139 bits (70), Expect = 2e-32
Identities = 70/70 (100%)
Strand = Plus / Plus


Query: 1549 gtcatcaaaattattcacctaaaaacataacatataaaccctcggtttcaaggcagagga 1608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1549 gtcatcaaaattattcacctaaaaacataacatataaaccctcggtttcaaggcagagga 1608


Query: 1609 tgattcactt 1618
||||||||||
Sbjct: 1609 tgattcactt 1618


Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus


Query: 1908 caaaactaaattaattaatttattattaataatgt 1942
|||||||||||||||||||||||||||||||||||
Sbjct: 1908 caaaactaaattaattaatttattattaataatgt 1942


Score = 32.2 bits (16), Expect = 3.1
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 1914 taaattaattaattta 1929
||||||||||||||||
Sbjct: 1929 taaattaattaattta 1914


>Contig-U14029-1 (Contig-U14029-1Q) /CSM_Contig/Contig-U14029-1Q.Seq.d
Length = 895

Score = 163 bits (82), Expect = 1e-39
Identities = 190/226 (84%)
Strand = Plus / Plus


Query: 875 attatttaattaaattacttttaatcggtgatagtggtgtaggtaaatcatgtcttttat 934
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 attatttatttaaattacttttaatcggtgatagtggtgtaggtaaatcatgtcttttac 118


Query: 935 tacgtttttctgaagattctttcacaccaagtttcatcactactattggtatcgatttca 994
| | ||| |||| || ||| || |||||||||| | || |||||| |||||||||
Sbjct: 119 ttagatttgctgatgacacttattcagaaagtttcatctcaacaattggtgtcgatttca 178


Query: 995 aaattcgtacaattgaattggaaggtaaaagaattaaattacaaatttgggatactgcag 1054
| ||| | || || ||||| | ||||||| ||||||||||||||||||||||||||||
Sbjct: 179 agattagaactatcgaattaaatggtaaaaccattaaattacaaatttgggatactgcag 238


Query: 1055 gtcaagaaagattcagaactatcactacagcatactatcgtggtgc 1100
| ||||||||||| ||||| || || || |||| |||||||||||
Sbjct: 239 gacaagaaagatttagaacaattacatcatcatattatcgtggtgc 284


>Contig-U11545-1 (Contig-U11545-1Q) /CSM_Contig/Contig-U11545-1Q.Seq.d
Length = 1187

Score = 155 bits (78), Expect = 3e-37
Identities = 85/86 (98%), Gaps = 1/86 (1%)
Strand = Plus / Minus


Query: 1094 gtggtgctatgggtatccctattggtttatgatgtcactgatgaaaaatcttttggtaac 1153
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gtggtgctatgggtatcc-tattggtttatgatgtcactgatgaaaaatcttttggtaac 69


Query: 1154 attagaaattggattagaaatatcga 1179
||||||||||||||||||||||||||
Sbjct: 68 attagaaattggattagaaatatcga 43


Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus


Query: 1181 gcaacatgctacagactctgttaataaaatgttaa 1215
|||||||||||||||||||||||||||||||||||
Sbjct: 8 gcaacatgctacagactctgttaataaaatgttaa 42


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 41,839
Number of Sequences: 8402
Number of extensions: 41839
Number of successful extensions: 5042
Number of sequences better than 10.0: 213
length of query: 1942
length of database: 8,075,542
effective HSP length: 17
effective length of query: 1925
effective length of database: 7,932,708
effective search space: 15270462900
effective search space used: 15270462900
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 3.23
Homology vs DNA
Query= Contig-U16277-1 (Contig-U16277-1Q) /CSM_Contig/Contig-U16277-1Q.Seq.d
(1942 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(M34457) Dictyostelium discoideum GTP-binding protein SAS1 g... 638 0.0 3
(AU037978) Dictyostelium discoideum slug cDNA, clone SSH118. 620 0.0 3
(C91481) Dictyostelium discoideum slug cDNA, clone SSK334. 620 0.0 3
(AU051903) Dictyostelium discoideum slug cDNA, clone SSC355. 613 0.0 6
(C89776) Dictyostelium discoideum slug cDNA, clone SSG832. 620 0.0 3
(AU037253) Dictyostelium discoideum slug cDNA, clone SSB671. 680 0.0 2
(AU270190) Dictyostelium discoideum vegetative cDNA clone:VS... 529 0.0 3
(M34456) Dictyostelium discoideum GTP-binding protein SAS2 m... 450 0.0 8
(BJ415110) Dictyostelium discoideum cDNA clone:ddv21o12, 5' ... 688 0.0 4
(AU051793) Dictyostelium discoideum slug cDNA, clone SSA350. 583 0.0 3
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 450 0.0 6
(BJ412726) Dictyostelium discoideum cDNA clone:ddv9j18, 5' e... 688 0.0 4
(BJ328400) Dictyostelium discoideum cDNA clone:dda28e03, 5' ... 688 0.0 4
(BJ327500) Dictyostelium discoideum cDNA clone:dda20m14, 5' ... 688 0.0 4
(BJ434188) Dictyostelium discoideum cDNA clone:ddv16l01, 3' ... 660 0.0 4
(BJ347346) Dictyostelium discoideum cDNA clone:dda26h20, 3' ... 507 0.0 3
(C89939) Dictyostelium discoideum slug cDNA, clone SSG645. 365 0.0 5
(C90225) Dictyostelium discoideum slug cDNA, clone SSI427. 365 0.0 5
(BJ414563) Dictyostelium discoideum cDNA clone:ddv19j13, 5' ... 668 0.0 2
(BJ359917) Dictyostelium discoideum cDNA clone:ddc3a07, 5' e... 642 0.0 3
(C90912) Dictyostelium discoideum slug cDNA, clone SSJ303. 351 0.0 6
(BJ397989) Dictyostelium discoideum cDNA clone:dds10d18, 3' ... 490 0.0 3
(BJ402782) Dictyostelium discoideum cDNA clone:dds18c10, 3' ... 466 0.0 3
(BJ343136) Dictyostelium discoideum cDNA clone:dda22k04, 3' ... 509 0.0 4
(AU051871) Dictyostelium discoideum slug cDNA, clone SSB365. 365 e-168 5
(AU051863) Dictyostelium discoideum slug cDNA, clone SSB339. 345 e-155 5
(BJ429793) Dictyostelium discoideum cDNA clone:ddv4l19, 3' e... 392 e-154 4
(AU052996) Dictyostelium discoideum slug cDNA, clone SLF474. 325 e-153 4
(AU265948) Dictyostelium discoideum vegetative cDNA clone:VS... 327 e-138 3
(AU061699) Dictyostelium discoideum slug cDNA, clone SLF474. 396 e-138 2
(C90044) Dictyostelium discoideum slug cDNA, clone SSG134. 500 e-136 1
(AU072111) Dictyostelium discoideum slug cDNA, clone SSD445. 252 e-124 2
(AU073833) Dictyostelium discoideum slug cDNA, clone SSI487. 456 e-123 1
(BJ345537) Dictyostelium discoideum cDNA clone:dda28c02, 3' ... 363 e-116 2
(AU037906) Dictyostelium discoideum slug cDNA, clone SSE440. 218 e-105 3
(AU073644) Dictyostelium discoideum slug cDNA, clone SSH729. 291 e-105 2
(BJ430996) Dictyostelium discoideum cDNA clone:ddv9c14, 3' e... 182 e-103 4
(AU072660) Dictyostelium discoideum slug cDNA, clone SSA481. 250 1e-94 2
(C90941) Dictyostelium discoideum slug cDNA, clone SSJ334. 190 4e-86 8
(AU072412) Dictyostelium discoideum slug cDNA, clone SSE440. 248 2e-77 2
(AU074224) Dictyostelium discoideum slug cDNA, clone SSJ849. 216 4e-60 3
(AU262155) Dictyostelium discoideum vegetative cDNA clone:VS... 184 1e-47 2
(L21009) Dictyostelium discoideum Rab1A mRNA, complete cds. 109 6e-46 3
(BJ331981) Dictyostelium discoideum cDNA clone:dda37f20, 5' ... 109 6e-46 3
(AU061016) Dictyostelium discoideum slug cDNA, clone SLC626. 109 6e-46 3
(C90434) Dictyostelium discoideum slug cDNA, clone SSI487. 101 4e-40 3
(AU270410) Dictyostelium discoideum vegetative cDNA clone:VS... 96 1e-39 4
(BJ430080) Dictyostelium discoideum cDNA clone:ddv6c03, 3' e... 100 2e-35 3
(AU038347) Dictyostelium discoideum slug cDNA, clone SSH594. 100 2e-35 3
(C93909) Dictyostelium discoideum slug cDNA, clone SSL855. 100 4e-35 3
(EH431849) NPE00000671 Neocallimastix patriciarum ZAP II cDN... 111 2e-34 4
(BJ431236) Dictyostelium discoideum cDNA clone:ddv13i11, 3' ... 92 5e-33 3
(C93756) Dictyostelium discoideum slug cDNA, clone SSL682. 100 9e-33 3
(AU073854) Dictyostelium discoideum slug cDNA, clone SSI545. 137 2e-32 2
(EC819807) SME00002670 esmbsro2 Sawyeria marylandensis cDNA,... 84 3e-32 4
(EC755914) PPE00011196 Agencourt Biosciences Agen-0020 Non-n... 101 9e-32 2
(EC824262) SME00007547 esmbsro2 Sawyeria marylandensis cDNA,... 84 1e-31 4
(C93963) Dictyostelium discoideum slug cDNA, clone SSC862. 101 1e-30 2
(AU060995) Dictyostelium discoideum slug cDNA, clone SLC551. 101 1e-30 2
(AU071970) Dictyostelium discoideum slug cDNA, clone SSC871. 101 1e-30 2
(AU071598) Dictyostelium discoideum slug cDNA, clone SSB864. 101 1e-30 2
(L21010) Dictyostelium discoideum Rab1B mRNA, 3' end of cds. 84 2e-29 4
(AU074312) Dictyostelium discoideum slug cDNA, clone SSK334. 139 4e-28 1
(BJ428030) Dictyostelium discoideum cDNA clone:ddv10d13, 3' ... 96 2e-26 2
(C90802) Dictyostelium discoideum slug cDNA, clone SSJ166. 84 1e-24 3
(C93361) Dictyostelium discoideum slug cDNA, clone SSM671. 84 2e-23 2
(BJ347124) Dictyostelium discoideum cDNA clone:dda26m06, 3' ... 84 6e-23 2
(DR040389) BNE00003055 Bigelowiella natans Non-normalized Bi... 62 2e-22 4
(FK903286) EST_lsal_evj_857495 lsalevj mixed_tissue_mixed_st... 119 4e-22 1
(AU060942) Dictyostelium discoideum slug cDNA, clone SLC331. 84 1e-21 2
(C93260) Dictyostelium discoideum slug cDNA, clone SSM886. 100 4e-21 3
(EG017620) EST02254_0906 Sporophyte cDNA Library Porphyra ha... 90 8e-21 5
(AU038910) Dictyostelium discoideum slug cDNA, clone SSM129. 94 4e-20 3
(C91549) Dictyostelium discoideum slug cDNA, clone SSK429. 94 5e-20 3
(AU263136) Dictyostelium discoideum vegetative cDNA clone:VS... 94 5e-20 3
(U02927) Dictyostelium discoideum Ax3 Rab4 mRNA, complete cds. 94 6e-20 3
(FK933771) EST_lsal_evj_940810 lsalevj mixed_tissue_mixed_st... 111 1e-19 1
(FK933770) EST_lsal_evj_954634 lsalevj mixed_tissue_mixed_st... 111 1e-19 1
(FK927059) EST_lsal_evj_951171 lsalevj mixed_tissue_mixed_st... 111 1e-19 1
(FK927058) EST_lsal_evj_946947 lsalevj mixed_tissue_mixed_st... 111 1e-19 1
(FK920884) EST_lsal_evj_954142 lsalevj mixed_tissue_mixed_st... 111 1e-19 1
(FK920883) EST_lsal_evj_958366 lsalevj mixed_tissue_mixed_st... 111 1e-19 1
(FK902216) EST_lsal_evj_854324 lsalevj mixed_tissue_mixed_st... 111 1e-19 1
(EX479480) EST_lsal_evj_789554 lsalevj mixed_tissue_mixed_st... 111 1e-19 1
(EX479479) EST_lsal_evj_789170 lsalevj mixed_tissue_mixed_st... 111 1e-19 1
(AL033503) C.albicans cosmid Ca49C4. 86 1e-19 3
(AF015306) Candida albicans small GTP-binding protein SEC4p ... 86 1e-19 3
(DW114975) CLRY3099.b1_E07.ab1 CLR(XYZ) lettuce serriola Lac... 62 1e-19 3
(DW114673) CLRY2793.b1_B03.ab1 CLR(XYZ) lettuce serriola Lac... 62 1e-19 3
(DW120747) CLRY9386.b1_D19.ab1 CLR(XYZ) lettuce serriola Lac... 62 1e-19 3
(DW138500) CLSY625.b1_A14.ab1 CLS(XYZ) lettuce sativa Lactuc... 62 1e-19 3
(DW130278) CLSX6975.b1_M15.ab1 CLS(XYZ) lettuce sativa Lactu... 62 1e-19 3
(DW127984) CLSX4509.b1_I24.ab1 CLS(XYZ) lettuce sativa Lactu... 62 1e-19 3
(DW137086) CLSY4585.b1_B20.ab1 CLS(XYZ) lettuce sativa Lactu... 62 1e-19 3
(AF017183) Candida albicans Sec4p (SEC4) gene, complete cds. 86 1e-19 3
(DW105831) CLRX3670.b1_K06.ab1 CLR(XYZ) lettuce serriola Lac... 62 1e-19 3
(DW116032) CLRY4153.b2_B08.ab1 CLR(XYZ) lettuce serriola Lac... 62 1e-19 3
(AR551059) Sequence 6190 from patent US 6747137. 86 1e-19 3
(DL173440) Methods for Identifying the Target of a Compound ... 86 1e-19 3
(AX489000) Sequence 6300 from Patent WO02053728. 86 1e-19 3
(BQ857744) QGB8F15.yg.ab1 QG_ABCDI lettuce salinas Lactuca s... 62 1e-19 3
(AU072906) Dictyostelium discoideum slug cDNA, clone SSF373. 94 1e-19 2
(C93287) Dictyostelium discoideum slug cDNA, clone SSM526. 82 1e-19 3
(C93044) Dictyostelium discoideum slug cDNA, clone SSF625. 82 2e-19 3
(C90580) Dictyostelium discoideum slug cDNA, clone SSI803. 82 2e-19 3
(AU039071) Dictyostelium discoideum slug cDNA, clone SSM345. 94 2e-19 3
(C94280) Dictyostelium discoideum slug cDNA, clone SSK733. 82 2e-19 3
(C84703) Dictyostelium discoideum slug cDNA, clone SSE658. 82 2e-19 3
(FG218308) Aaov01481 Antheraea assama fifth instar larval ov... 50 2e-19 4
(C92440) Dictyostelium discoideum slug cDNA, clone SSE547. 100 2e-19 2
(C93305) Dictyostelium discoideum slug cDNA, clone SSM603. 100 2e-19 2
(EE722787) camnoP089E11 camno Biomphalaria glabrata cDNA clo... 101 2e-19 2
(EE723373) campoP091F06 campo Biomphalaria glabrata cDNA clo... 101 2e-19 2
(AB015237) Dictyostelium discoideum Rab1C mRNA, complete cds. 82 3e-19 3
(FG204600) Aabr01324 Antheraea assama fifth instar larval br... 50 4e-19 4
(FG214285) Aamsg00928 Antheraea assama fifth instar larval m... 50 4e-19 4
(Z49899) P.sativum mRNA for small G protein. 64 4e-19 3
(DR041053) BNE00001177 Bigelowiella natans Non-normalized Bi... 62 4e-19 3
(DR040040) BNE00001582 Bigelowiella natans Non-normalized Bi... 62 4e-19 3
(DR038945) BNE00000481 Bigelowiella natans Non-normalized Bi... 62 4e-19 3
(DR039429) BNE00002953 Bigelowiella natans Non-normalized Bi... 62 4e-19 3
(DR039321) BNE00003619 Bigelowiella natans Non-normalized Bi... 62 4e-19 3
(DR039062) BNE00002804 Bigelowiella natans Non-normalized Bi... 62 4e-19 3
(FK928040) EST_lsal_evj_951676 lsalevj mixed_tissue_mixed_st... 105 5e-19 2
(FK928041) EST_lsal_evj_957436 lsalevj mixed_tissue_mixed_st... 105 5e-19 2
(FK910031) EST_lsal_evj_933939 lsalevj mixed_tissue_mixed_st... 105 5e-19 2
(ES394234) MUS09-J15.x1d-t SHGC-MUS Mytilus californianus cD... 66 8e-19 2
(BI678057) CLS941 CLS (Cambium and bark region of black locu... 86 8e-19 2
(C89695) Dictyostelium discoideum slug cDNA, clone SSA695. 80 2e-18 4
(CR382125) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 76 3e-18 2
(DW149661) CLVX14951.b1_N18.ab1 CLV(XYZ) lettuce virosa Lact... 68 4e-18 4
(BJ351812) Dictyostelium discoideum cDNA clone:dda44n15, 3' ... 90 6e-18 2
(DV207993) 0089P0104Z_C06_T7 Mimulus guttatus library 2 Mimu... 84 6e-18 3
(AL385573) Medicago truncatula EST MtBC29C12F1 : T3 end of c... 64 6e-18 3
(EB756742) 660257 MN12 Leptinotarsa decemlineata cDNA clone ... 76 8e-18 3
(EH011974) USDA-FP_184920 Lysiphlebus testaceipes adult whol... 46 9e-18 4
(DT601905) wmi03-4ms3-f11 Wmi03 Welwitschia mirabilis cDNA c... 70 1e-17 2
(CV151796) tai71d10.y2 Hydra EST UCI 5 ALP Hydra magnipapill... 74 1e-17 2
(EG016891) EST00157_0906 Sporophyte cDNA Library Porphyra ha... 92 1e-17 4
(FC765258) CBBN2362.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv... 88 1e-17 3
(EC821471) SME00006372 esmbsro2 Sawyeria marylandensis cDNA,... 84 2e-17 4
(AU076332) Dictyostelium discoideum slug cDNA, clone SSA604. 88 2e-17 2
(DV078870) J14SFmidgut_004_5prime Spodoptera frugiperda midg... 86 3e-17 2
(CJ761358) Ipomoea nil cDNA clone:jmsf25k13, 3' end. 84 5e-17 2
(CJ742910) Ipomoea nil cDNA clone:jmsf25k13, 5' end. 84 5e-17 2
(CD450938) USDA-FP_102961 Adult Alate Brown Citrus Aphid Tox... 78 5e-17 3
(EC602875) Y07A02 YLX600 Hevea brasiliensis cDNA clone Y07A0... 54 9e-17 3
(DR040525) BNE00001488 Bigelowiella natans Non-normalized Bi... 54 9e-17 3
(EC606396) Y64H05 YLX600 Hevea brasiliensis cDNA clone Y64H0... 54 9e-17 3
(EC608465) Y75E01 YLX600 Hevea brasiliensis cDNA clone Y75E0... 54 9e-17 3
(EH014284) USDA-FP_186999 Lysiphlebus testaceipes adult whol... 82 2e-16 3
(DW141712) CLSY9775.b1_N19.ab1 CLS(XYZ) lettuce sativa Lactu... 74 2e-16 3
(DY982851) CLSS5164.b1_H19.ab1 CLS(LMS) lettuce sativa Lactu... 74 2e-16 3
(DW133122) CLSX9805.b1_I04.ab1 CLS(XYZ) lettuce sativa Lactu... 74 3e-16 3
(DW133147) CLSX9831.b1_M10.ab1 CLS(XYZ) lettuce sativa Lactu... 74 3e-16 3
(DW132901) CLSX9580.b2_H20.ab1 CLS(XYZ) lettuce sativa Lactu... 74 3e-16 3
(DV131743) CV03061A1A05.f1 CV03-normalized library Euphorbia... 74 3e-16 3
(AL440480) T3 end of clone BD0AA012F12 of library BD0AA from... 90 7e-16 2
(DY823549) CTOY15248.b1_O20.ab1 CTO(XYZ) dandelion Taraxacum... 62 7e-16 2
(C90430) Dictyostelium discoideum slug cDNA, clone SSI475. 88 7e-16 2
(C93700) Dictyostelium discoideum slug cDNA, clone SSL623. 62 7e-16 3
(AU061722) Dictyostelium discoideum slug cDNA, clone SLF562. 80 2e-15 2
(DW065031) CLLY4648.b1_O09.ab1 CLL(XYZ) lettuce saligna Lact... 62 3e-15 2
(DW169598) CLVY7888.b1_O04.ab1 CLV(XYZ) lettuce virosa Lactu... 62 3e-15 2
(DW165866) CLVY4386.b1_D17.ab1 CLV(XYZ) lettuce virosa Lactu... 62 3e-15 2
(EX658436) JS1AM35JG Salt stressed Fragaria vesca (strain Ha... 82 3e-15 2
(EX671297) JS3BX02JG Heat stressed Fragaria vesca (strain Ha... 82 3e-15 2
(FD748307) Afi04_31_A02_C014.b1 Aristolochia fimbriata flowe... 70 3e-15 2
(EX657175) JS1A394JGB Salt stressed Fragaria vesca (strain H... 82 3e-15 2
(BI517122) BB160024B10A11.5 Bee Brain Normalized Library, BB... 82 3e-15 2
(DB736345) Apis mellifera head cDNA, RIKEN full-length enric... 82 3e-15 2
(DB746228) Apis mellifera head cDNA, RIKEN full-length enric... 82 3e-15 2
(DB741508) Apis mellifera head cDNA, RIKEN full-length enric... 82 3e-15 2
(DB754435) Apis mellifera head cDNA, RIKEN full-length enric... 82 3e-15 2
(DB746408) Apis mellifera head cDNA, RIKEN full-length enric... 82 3e-15 2
(DB737308) Apis mellifera head cDNA, RIKEN full-length enric... 82 3e-15 2
(DB729081) Apis mellifera head cDNA, RIKEN full-length enric... 82 3e-15 2
(DB731601) Apis mellifera head cDNA, RIKEN full-length enric... 82 3e-15 2
(DB754510) Apis mellifera head cDNA, RIKEN full-length enric... 82 3e-15 2
(DB728223) Apis mellifera head cDNA, RIKEN full-length enric... 82 3e-15 2
(DB751111) Apis mellifera head cDNA, RIKEN full-length enric... 82 3e-15 2
(DB734523) Apis mellifera head cDNA, RIKEN full-length enric... 82 3e-15 2
(FC736895) CBBH1882.fwd CBBH Lottia gigantea 26h,37h,61h Lar... 80 3e-15 3
(EY271734) BF01051B1F05.f1 Normalized subtracted keck librar... 84 3e-15 3
(FC609221) CAXS4337.fwd CAXS Lottia gigantea from head, foot... 80 3e-15 3
(EB761904) 602122 MN12 Leptinotarsa decemlineata cDNA clone ... 76 4e-15 2
(DR099488) STRR1_56_A10.b1_A033 Stem Response Resistant Pinu... 66 5e-15 3
(DV125295) CV03041B2F12.f1 CV03-normalized library Euphorbia... 70 5e-15 3
(FD451557) EGGAC17TF Haematobia irritans eggs Haematobia irr... 72 5e-15 3
(FD461115) LARVJ71TF Haematobia irritans 1st Instar Larvae H... 72 6e-15 3
(FD457119) EGGBB95TF Haematobia irritans eggs Haematobia irr... 72 6e-15 3
(FD449776) EGGA137TF Haematobia irritans eggs Haematobia irr... 72 6e-15 3
(FD449732) EGGA105TF Haematobia irritans eggs Haematobia irr... 72 6e-15 3
(FD449777) EGGA137TR Haematobia irritans eggs Haematobia irr... 72 6e-15 3
(FD451558) EGGAC17TR Haematobia irritans eggs Haematobia irr... 72 6e-15 3
(FD449733) EGGA105TR Haematobia irritans eggs Haematobia irr... 72 6e-15 3
(FD461116) LARVJ71TR Haematobia irritans 1st Instar Larvae H... 72 7e-15 3
(EE671325) SAAH-aac56f11.g1 Agen 0058 Schmidtea mediterranea... 78 1e-14 2
(FD751575) Afi04_79_B05_C014.g1 Aristolochia fimbriata flowe... 68 1e-14 2
(FD759403) Afi04_199_G12_C014.g1 Aristolochia fimbriata flow... 68 1e-14 2
(EC617428) SAAH-aaa40d06.g1 Agen 0058 Schmidtea mediterranea... 78 1e-14 2
(EG990635) GLE091_E09_036 Cyamopsis tetragonoloba (L.) Taub ... 72 1e-14 2
(FD762979) Afi06_18_C09_C014.g1 Aristolochia fimbriata mixed... 68 1e-14 2
(FD762903) Afi06_17_C09_C014.b2 Aristolochia fimbriata mixed... 68 1e-14 2
(EE666041) SAAH-aab55g07.g1 Agen 0058 Schmidtea mediterranea... 78 1e-14 2
(EG413517) SAAH-aab11d02.b1 Agen 0058 Schmidtea mediterranea... 78 1e-14 2
(EG409726) SAAH-aaa40d06.b1 Agen 0058 Schmidtea mediterranea... 78 1e-14 2
(EG416999) SAAH-aab55g07.b1 Agen 0058 Schmidtea mediterranea... 78 1e-14 2
(EE282655) SAAH-aab11d02.g1 Agen 0058 Schmidtea mediterranea... 78 1e-14 2
(FD763821) Afi06_30_C01_C014.g1 Aristolochia fimbriata mixed... 68 1e-14 2
(EE281430) SAAH-aaa93a01.g1 Agen 0058 Schmidtea mediterranea... 78 1e-14 2
(EA200507) Sequence 64822 from patent US 7214786. 88 1e-14 2
(AU071405) Dictyostelium discoideum slug cDNA, clone SSB423. 84 1e-14 2
(AU071406) Dictyostelium discoideum slug cDNA, clone SSB424. 84 1e-14 2
(AU039004) Dictyostelium discoideum slug cDNA, clone SSM262. 94 2e-14 2
(EX999603) CBAH1235.g1:P T. versicolor peonidin treated reve... 72 2e-14 3
(EX999602) CBAH1235.b1:P T. versicolor peonidin treated reve... 72 2e-14 3
(EY003139) CBAH3102.g1:Q T. versicolor peonidin treated reve... 72 2e-14 3
(EY003136) CBAH3102.b1:P T. versicolor peonidin treated reve... 72 2e-14 3
(BJ429961) Dictyostelium discoideum cDNA clone:ddv5e16, 3' e... 94 2e-14 1
(EY136926) CBTH5631.g1_M16.ab1:P Triphysaria pusilla root ti... 52 2e-14 4
(EY136925) CBTH5631.b1_M16.ab1:P Triphysaria pusilla root ti... 52 2e-14 4
(EY134381) CBTH4468.b1_G14.ab1:P Triphysaria pusilla root ti... 52 2e-14 4
(DQ443136) Bombyx mori small GTP binding protein RAB8 mRNA, ... 78 4e-14 2
(DQ525203) Bombyx mori ras-related GTP-binding protein Rab8 ... 78 4e-14 2
(AV402967) Bombyx mori cDNA clone:heS30809. 78 4e-14 2
(BP126009) Bombyx mori cDNA, clone:heS30809, 5' end sequence. 78 4e-14 2
(EE877229) sp_b3_43 Sweetpotato cDNA library B Ipomoea batat... 76 4e-14 2
(AU003611) Bombyx mori cDNA, clone ws00335. 78 4e-14 2
(AU004170) Bombyx mori cDNA, clone ws20005. 78 4e-14 2
(BJ984697) Bombyx mori cDNA, clone:E_FL_mxg-_13G15_F_0, 5' e... 78 4e-14 2
(AV405921) Bombyx mori cDNA clone:wdV30400. 78 4e-14 2
(BP125374) Bombyx mori cDNA, clone:fbpv0762, 5' end sequence. 78 4e-14 2
(BJ983832) Bombyx mori cDNA, clone:E_FL_mxg-_08H09_F_0, 5' e... 78 4e-14 2
(BJ985234) Bombyx mori cDNA, clone:E_FL_mxg-_16I14_F_0, 5' e... 78 4e-14 2
(DC434747) Bombyx mori cDNA, clone:E_FL_epM-_09A01_F_0, 5' e... 78 4e-14 2
(BP117101) Bombyx mori cDNA, clone:brS-1255, 5' end sequence. 78 4e-14 2
(CK540309) rswhb0_003853.y1 swh Bombyx mori cDNA, mRNA seque... 78 4e-14 2
(BP117114) Bombyx mori cDNA, clone:brS-1268, 5' end sequence. 78 4e-14 2
(CK559181) rswpb0_001116.y1 swp Bombyx mori cDNA, mRNA seque... 78 4e-14 2
(CK564220) rswpb0_008784.y1 swp Bombyx mori cDNA, mRNA seque... 78 4e-14 2
(BY937775) Bombyx mori cDNA, clone:E_FL_e100_02P03_F_0, 5' e... 78 4e-14 2
(BI512607) BB160009B20B06.5 Bee Brain Normalized Library, BB... 82 4e-14 2
(CK563430) rswpb0_006635.y1 swp Bombyx mori cDNA, mRNA seque... 78 4e-14 2
(BY925644) Bombyx mori cDNA, clone:E_EL_vg4M_08H17_F_0, 5' e... 78 4e-14 2
(CK486818) rswab0_003641.y1 swa Bombyx mori cDNA, mRNA seque... 78 4e-14 2
(DC542002) Bombyx mori cDNA, clone:E_FL_dpe-_13N17_F_0, 5' e... 78 4e-14 2
(BY940634) Bombyx mori cDNA, clone:E_FL_e100_09N19_F_0, 5' e... 78 4e-14 2
(DY979161) CLSS12858.b1_D23.ab1 CLS(LMS) lettuce sativa Lact... 66 5e-14 3
(DY355050) ZO__Ec0008C08.r ZO__Ec Zingiber officinale cDNA c... 78 7e-14 2
(AM761512) Oopsacas minuta EST, 5' end sequence, clone IL0AF... 92 9e-14 1
(DW521850) AE00109 Acanthus ebracteatus cDNA Library Acanthu... 68 9e-14 3
(DY385296) CL__Ea0004P18.r CL__Ea Curcuma longa cDNA clone C... 78 1e-13 2
(BJ325527) Dictyostelium discoideum cDNA clone:dda1a10, 5' e... 74 1e-13 2
(DW088579) CLPY12390.b1_L01.ab1 CLP(XYZ) lettuce perennis La... 56 2e-13 2
(DW098520) CLPY9555.b1_F14.ab1 CLP(XYZ) lettuce perennis Lac... 56 2e-13 2
(DW096683) CLPY7693.b1_I03.ab1 CLP(XYZ) lettuce perennis Lac... 56 2e-13 2
(DW091979) CLPY3272.b1_O02.ab1 CLP(XYZ) lettuce perennis Lac... 56 2e-13 2
(EG990786) GLE018_G01_002 Cyamopsis tetragonoloba (L.) Taub ... 72 2e-13 2
(EC603273) Y47B06 YLX600 Hevea brasiliensis cDNA clone Y47B0... 56 2e-13 2
(EG988243) GLE016_C06_022 Cyamopsis tetragonoloba (L.) Taub ... 72 2e-13 2
(AU261343) Dictyostelium discoideum vegetative cDNA clone:VS... 90 2e-13 2
(ES251455) WS03714.C21.1_K09 SS-B-N-22 Picea sitchensis cDNA... 46 3e-13 6
(AK287134) Glycine max cDNA, clone: GMFL01-45-A11. 48 3e-13 3
(EV265878) GLLAZ53TF JCVI-SOY1 Glycine max cDNA 5', mRNA seq... 48 3e-13 3
(EG660664) RCLFH13TP Castor bean cDNA library from leaves, 1... 56 3e-13 3
(GE635589) LINN_XX_018_G14_LINN18.CR_G14 R. communis develop... 56 3e-13 3
(EV265360) GLLAT47TF JCVI-SOY1 Glycine max cDNA 5', mRNA seq... 48 3e-13 3
(EV282073) GLNBC09TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 48 3e-13 3
(EV221836) 0136944 Brassica napus Root - drought Brassica na... 54 3e-13 3
(EV222259) 0138148 Brassica napus Root - drought Brassica na... 54 3e-13 3
(EG662069) RCLFW31TP Castor bean cDNA library from leaves, 1... 56 3e-13 3
(EV279643) GLNAK12TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 48 3e-13 3
(FG123858) 5211-113-C09 Oenothera strain hookeri de Vries le... 50 3e-13 3
(BI944157) sa89a01.y1 Gm-c1004 Glycine max cDNA clone GENOME... 48 3e-13 3
(BM309769) sak66d08.y1 Gm-c1036 Glycine max cDNA clone SOYBE... 48 3e-13 3
(BM528102) sal54d08.y1 Gm-c1061 Glycine max cDNA clone SOYBE... 48 3e-13 3
(BF069882) st59d08.y1 Gm-c1053 Glycine max cDNA clone GENOME... 48 3e-13 3
(BE607955) sq19a12.y1 Gm-c1046 Glycine max cDNA clone GENOME... 48 3e-13 3
(EV282807) GLNBK68TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 48 3e-13 3
(DB970072) Glycine max cDNA, clone: GMFL02-42-A24, 5'end. 48 3e-13 3
(DB960722) Glycine max cDNA, clone: GMFL02-15-L18, 5'end. 48 3e-13 3
(BE440330) sp44b08.y1 Gm-c1043 Glycine max cDNA clone GENOME... 48 3e-13 3
(DB970427) Glycine max cDNA, clone: GMFL02-43-A15, 5'end. 48 3e-13 3
(BU927408) sat12b09.y1 Gm-c1036 Glycine max cDNA clone SOYBE... 48 3e-13 3
(AJ224685) Candida glabrata SEC4 homologue, complete CDS. 64 3e-13 4
(GD811409) 454GmaGlobSeed554058 Soybean Seeds Containing Glo... 48 3e-13 3
(GD918259) 454GmaGlobSeed660908 Soybean Seeds Containing Glo... 48 3e-13 3
(BJ928746) Daphnia magna cDNA, clone:IGU001_0036_G10.f, 5' e... 90 4e-13 1
(FD731356) WS03737.C21_D03 SS-B-N-22 Picea sitchensis cDNA c... 46 5e-13 6
(FD457120) EGGBB95TR Haematobia irritans eggs Haematobia irr... 72 5e-13 2
(FF395627) MOOFY18TR MOO Vigna unguiculata cDNA 3', mRNA seq... 70 6e-13 2
(FF388411) MOOCJ74TF MOO Vigna unguiculata cDNA 5', mRNA seq... 70 6e-13 2
(FF546825) MOPDH38TF MOP Vigna unguiculata cDNA 5', mRNA seq... 70 6e-13 2
(FG901802) UCRVU08_CCNS1933_b1 Cowpea IT97K-461-4 Mixed Tiss... 70 6e-13 2
(FF398103) MOOFY18TF MOO Vigna unguiculata cDNA 5', mRNA seq... 70 6e-13 2
(FG908007) UCRVU08_CCNS5474_b1 Cowpea IT97K-461-4 Mixed Tiss... 70 6e-13 2
(C93063) Dictyostelium discoideum slug cDNA, clone SSF727. 88 8e-13 2
(AJ278658) Aspergillus niger srgA gene for a secretion relat... 56 1e-12 3
(AK285223) Glycine max cDNA, clone: GMFL01-05-F05. 48 1e-12 3
(CV138605) EST849814 Sequencing ESTs from loblolly pine embr... 58 1e-12 3
(DR024931) STRS1_68_A11.g1_A034 Shoot tip pitch canker susce... 58 1e-12 3
(DR015588) STRS1_4_A05.g1_A034 Shoot tip pitch canker suscep... 58 1e-12 3
(DR015510) STRS1_4_A05.b1_A034 Shoot tip pitch canker suscep... 58 1e-12 3
(CO364087) RTK1_13_D04.g1_A029 Roots minus potassium Pinus t... 58 1e-12 3
(DT624533) EST1158820 Sequencing ESTs from loblolly pine emb... 58 1e-12 3
(CO364007) RTK1_13_D04.b1_A029 Roots minus potassium Pinus t... 58 1e-12 3
(CX653173) COLD1_63_G11.g1_A029 Root cold Pinus taeda cDNA c... 58 1e-12 3
(DR096518) STRR1_28_B04.g1_A033 Stem Response Resistant Pinu... 58 1e-12 3
(EV278532) GLNA771TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 48 1e-12 3
(DR690255) EST1080341 Normalized pine embryo library, Lib_D ... 58 1e-12 3
(DR694872) EST1084965 Normalized pine embryo library, Lib_D ... 58 1e-12 3
(EV278638) GLNA889TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 48 1e-12 3
(CF393683) RTDR3_15_C08.g1_A022 Loblolly pine roots recoveri... 58 1e-12 3
(FK019080) GLND649TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 48 1e-12 3
(CX715045) RTPQ1_30_H12.b1_A032 Roots treated with paraquat ... 58 1e-12 3
(CX715074) RTPQ1_30_H12.g1_A032 Roots treated with paraquat ... 58 1e-12 3
(CF472463) RTDS1_9_B01.g1_A015 Drought-stressed loblolly pin... 58 1e-12 3
(EV221967) 0137216 Brassica napus Root - drought Brassica na... 54 1e-12 3
(FG994941) GLLEG85TF JCVI-SOY1 Glycine max cDNA 5', mRNA seq... 48 1e-12 3
(CF668821) RTCNT1_38_H05.g1_A029 Root control Pinus taeda cD... 58 1e-12 3
(CA784653) sat87b03.y1 Gm-c1062 Glycine max cDNA clone SOYBE... 48 1e-12 3
(CO170874) NDL1_17_C04.g1_A029 Needles control Pinus taeda c... 58 1e-12 3
(CF479356) RTWW3_23_H05.g1_A022 Well-watered loblolly pine r... 58 1e-12 3
(EH261505) JGI_ACBU4854.fwd ACBU Phakopsora pachyrhizi infec... 48 1e-12 3
(DR163886) RTFE1_45_C01.g1_A029 Roots minus iron Pinus taeda... 58 1e-12 3
(EH261305) JGI_ACBU4743.fwd ACBU Phakopsora pachyrhizi infec... 48 1e-12 3
(DR690793) EST1080879 Normalized pine embryo library, Lib_D ... 58 1e-12 3
(CA800581) sau18e02.y1 Gm-c1062 Glycine max cDNA clone SOYBE... 48 1e-12 3
(CF471303) RTDS1_2_A06.g1_A015 Drought-stressed loblolly pin... 58 1e-12 3
(EV281614) GLNB686TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 48 1e-12 3
(AW132434) se03c11.y1 Gm-c1013 Glycine max cDNA clone GENOME... 48 1e-12 3
(DR742656) RTCU1_5_D10.g2_A029 Roots plus added copper Pinus... 58 1e-12 3
(DR162820) RTFE1_20_G08.g1_A029 Roots minus iron Pinus taeda... 58 1e-12 3
(AW307389) sf56d06.y1 Gm-c1009 Glycine max cDNA clone GENOME... 48 1e-12 3
(BW653085) Glycine max cDNA clone: GMFL01-05-F05, 5'end, sim... 48 1e-12 3
(BQ272955) sao21a07.y1 Gm-c1054 Glycine max cDNA clone SOYBE... 48 1e-12 3
(AW869903) NXNV_122_H04_F Nsf Xylem Normal wood Vertical Pin... 58 1e-12 3
(AW472147) si20e03.y1 Gm-c1029 Glycine max cDNA clone GENOME... 48 1e-12 3
(DR018975) STRS1_27_C04.b1_A034 Shoot tip pitch canker susce... 58 1e-12 3
(BI892975) sag81e12.y1 Gm-c1084 Glycine max cDNA clone GENOM... 48 1e-12 3
(BM188008) saj83f08.y1 Gm-c1074 Glycine max cDNA clone SOYBE... 48 1e-12 3
(BG789807) sae55f09.y1 Gm-c1051 Glycine max cDNA clone GENOM... 48 1e-12 3
(AW509383) si22d09.y1 Gm-c1029 Glycine max cDNA clone GENOME... 48 1e-12 3
(EG659616) RCLF563TP Castor bean cDNA library from leaves, 1... 56 1e-12 3
(BG789808) sae55f12.y1 Gm-c1051 Glycine max cDNA clone GENOM... 48 1e-12 3
(CF806895) psHB017xD09f USDA-IFAFS:Expression of Phytophthor... 48 1e-12 3
(BF517879) NXSI_029_C02_F NXSI (Nsf Xylem Side wood Inclined... 58 1e-12 3
(EH261265) JGI_ACBU4868.fwd ACBU Phakopsora pachyrhizi infec... 48 1e-12 3
(DB971999) Glycine max cDNA, clone: GMFL02-47-G21, 5'end. 48 1e-12 3
(BF716240) saa16f08.y1 Gm-c1058 Glycine soja cDNA clone GENO... 48 1e-12 3
(BQ134066) san56g11.y1 Gm-c1052 Glycine max cDNA clone SOYBE... 48 1e-12 3
(FC600365) CAXS12845.fwd CAXS Lottia gigantea from head, foo... 84 1e-12 2
(FD393246) 1106162226353 Cryptosporidium muris (strain RN66)... 74 1e-12 3
(FC746695) CBBI2684.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 84 1e-12 2
(FD392615) 1106162221937 Cryptosporidium muris (strain RN66)... 74 1e-12 3
(FC745539) CBBI1500.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 84 1e-12 2
(FC751439) CBBI5755.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 84 1e-12 2
(FC719068) CBBG12545.fwd CBBG Lottia gigantea 12,15,18h embr... 84 1e-12 2
(FC749958) CBBI4833.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 84 1e-12 2
(FC762795) CBBN13517.fwd CBBN Lottia gigantea 3,4,5,6.5d Lar... 84 1e-12 2
(FC782261) CBGC13600.fwd CBGC Lottia gigantea 15h 18h embryo... 84 1e-12 2
(FC730175) CBBG5833.fwd CBBG Lottia gigantea 12,15,18h embry... 84 1e-12 2
(FC791401) CBGC20961.fwd CBGC Lottia gigantea 15h 18h embryo... 84 1e-12 2
(FC743551) CBBI13770.fwd CBBI Lottia gigantea 26h,37h,61h La... 84 1e-12 2
(FC773943) CBBN8017.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv... 84 1e-12 2
(FC752901) CBBI6667.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 84 1e-12 2
(FC731043) CBBG6380.fwd CBBG Lottia gigantea 12,15,18h embry... 84 1e-12 2
(FC722993) CBBG15021.fwd CBBG Lottia gigantea 12,15,18h embr... 84 1e-12 2
(FC717441) CBBG11509.fwd CBBG Lottia gigantea 12,15,18h embr... 84 1e-12 2
(FC776452) CBGB461.fwd CBGB Lottia gigantea 3,6,9,12h embryo... 84 1e-12 2
(FC776451) CBGB461.rev CBGB Lottia gigantea 3,6,9,12h embryo... 84 1e-12 2
(FC750361) CBBI5087.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 84 1e-12 2
(FC769053) CBBN4810.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv... 84 1e-12 2
(FC775033) CBBN8719.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv... 84 1e-12 2
(FC593706) CAXP7735.fwd CAXP Lottia gigantea from head, foot... 84 1e-12 2
(FC586857) CAXP3871.fwd CAXP Lottia gigantea from head, foot... 84 1e-12 2
(FC558389) CAWF1697.fwd CAWF Lottia gigantea from mantle (H)... 84 1e-12 2
(FC587794) CAXP4338.fwd CAXP Lottia gigantea from head, foot... 84 1e-12 2
(FC576144) CAXP12123.fwd CAXP Lottia gigantea from head, foo... 84 1e-12 2
(FC699139) CAXX7468.fwd CAXX Lottia gigantea from male gonad... 84 1e-12 2
(GE321331) OXBB-aaa22e08.g1 Oxytricha_pSMART_OXBB Sterkiella... 68 2e-12 3
(GE324758) OXBB-aaa52f05.b1 Oxytricha_pSMART_OXBB Sterkiella... 68 2e-12 3
(GE322279) OXBB-aaa22e08.b1 Oxytricha_pSMART_OXBB Sterkiella... 68 2e-12 3
(DC430177) Cryptomeria japonica cDNA, clone: CC12458, 5' end... 64 2e-12 3
(DN302017) PL04024A2H01 cDNA from sexually mature hermaphodi... 70 2e-12 2
(EC615581) SAAH-aaa66h03.g1 Agen 0058 Schmidtea mediterranea... 70 2e-12 2
(DN313077) PL06014B1F11 cDNA from juvenile hermaphodites Sch... 70 2e-12 2
(DN308618) PL05017A1F04 cDNA from sexually mature hermaphodi... 70 2e-12 2
(DN314465) PL06018A2F09 cDNA from juvenile hermaphodites Sch... 70 2e-12 2
(EG350396) SAAH-aad11e09.g1 Agen 0058 Schmidtea mediterranea... 70 2e-12 2
(EE672460) SAAH-aab74f01.g1 Agen 0058 Schmidtea mediterranea... 70 2e-12 2
(FD757205) Afi04_164_E03_C014.g1 Aristolochia fimbriata flow... 60 2e-12 2
(FD757511) Afi04_171_F01_C014.g1 Aristolochia fimbriata flow... 60 2e-12 2
(DN297967) PL04011A1H10 cDNA from sexually mature hermaphodi... 70 2e-12 2
(EG351240) SAAH-aad16g09.g1 Agen 0058 Schmidtea mediterranea... 70 2e-12 2
(EG348194) SAAH-aac84f09.g1 Agen 0058 Schmidtea mediterranea... 70 2e-12 2
(EC618058) SAAH-aaa63g09.g1 Agen 0058 Schmidtea mediterranea... 70 2e-12 2
(EG412200) SAAH-aaa93a01.b1 Agen 0058 Schmidtea mediterranea... 70 2e-12 2
(DN312681) PL06013B1D07 cDNA from juvenile hermaphodites Sch... 70 2e-12 2
(EG347207) SAAH-aaa75a09.g1 Agen 0058 Schmidtea mediterranea... 70 2e-12 2
(EW726953) RS2A031TR RS2(RS) Raphanus sativus cDNA 3', mRNA ... 48 4e-12 3
(EY931959) RS1DS13TF RS1(AR) Raphanus sativus var. oleiformi... 48 4e-12 3
(EW722122) RS2A031TV RS2(RS) Raphanus sativus cDNA 5', mRNA ... 48 4e-12 3
(FD576927) RS3EK21TF RS3(RT) Raphanus sativus cDNA 5', mRNA ... 48 4e-12 3
(EY942914) RS3D912JQ RS3(RT) Raphanus sativus cDNA 3', mRNA ... 48 4e-12 3
(EY927795) RS1DS13JQ RS1(AR) Raphanus sativus var. oleiformi... 48 4e-12 3
(FD944454) RS2H182JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ... 48 4e-12 3
(FD529837) RR1EZ22JQ RR1(CS) Raphanus raphanistrum subsp. ma... 48 4e-12 3
(FD578777) RS3F550TF RS3(RT) Raphanus sativus cDNA 5', mRNA ... 48 4e-12 3
(FD533725) RR1EZ22TF RR1(CS) Raphanus raphanistrum subsp. ma... 48 4e-12 3
(FD948493) RS2GZ39TF RS2(RS) Raphanus sativus cDNA 5', mRNA ... 48 4e-12 3
(EW722121) RS2A031TF RS2(RS) Raphanus sativus cDNA 5', mRNA ... 48 4e-12 3
(FD948704) RS2H182TF RS2(RS) Raphanus sativus cDNA 5', mRNA ... 48 4e-12 3
(EY946911) RS3D912TF RS3(RT) Raphanus sativus cDNA 5', mRNA ... 48 4e-12 3
(EX991529) CBAF2957.g1:P T. versicolor host exudate reverse ... 64 4e-12 3
(EX991528) CBAF2957.b1:P T. versicolor host exudate reverse ... 64 4e-12 3
(AW832174) sm20g06.y1 Gm-c1027 Glycine max cDNA clone GENOME... 48 4e-12 3
(AW203760) sf37h10.y1 Gm-c1028 Glycine max cDNA clone GENOME... 48 4e-12 3
(AI438055) sa35c07.y1 Gm-c1004 Glycine max cDNA clone GENOME... 48 4e-12 3
(EY020788) CBAB420.b2:P T. versicolor self root extracts rev... 64 4e-12 3
(AI461166) sa75h12.y1 Gm-c1004 Glycine max cDNA clone GENOME... 48 4e-12 3
(EH010921) USDA-FP_183972 Lysiphlebus testaceipes adult whol... 46 4e-12 3
(EY141840) CBTH7889.b1_A06.ab1:P Triphysaria pusilla root ti... 44 5e-12 4
(FK910032) EST_lsal_evj_950067 lsalevj mixed_tissue_mixed_st... 82 5e-12 2
(CB079069) hj76a10.g1 Hedyotis terminalis flower - Stage 2 (... 86 6e-12 1
(CJ760296) Ipomoea nil cDNA clone:jmsf22j20, 3' end. 76 9e-12 2
(CJ765326) Ipomoea nil cDNA clone:jmsf36b12, 3' end. 76 9e-12 2
(BJ574764) Ipomoea nil cDNA clone:jm27m08, 3' end, single read. 76 9e-12 2
(CX128027) AH0130 Peanut Lambda Express library Arachis hypo... 70 9e-12 2
(EE881945) sp_d7_73 Sweetpotato cDNA library D Ipomoea batat... 76 9e-12 2
(CJ741798) Ipomoea nil cDNA clone:jmsf22j20, 5' end. 76 9e-12 2
(CJ746990) Ipomoea nil cDNA clone:jmsf36b12, 5' end. 76 9e-12 2
(ES720936) TFR5_29_A12_E001.g1 USDA-Tifton Peanut Library TF... 70 9e-12 2
(ES723474) TFR6_30_D05_E001.g1 USDA-Tifton Peanut Library TF... 70 9e-12 2
(ES754975) C20L_53_B07_E002.g1 USDA-Tifton Peanut Library C2... 70 9e-12 2
(BM399622) 5009-0-6-C02.t.1 Chilcoat/Turkewitz cDNA (large f... 56 1e-11 3
(BM400961) 5009-0-80-G01.t.1 Chilcoat/Turkewitz cDNA (large ... 56 1e-11 3
(BM399867) 5009-0-62-E11.t.1 Chilcoat/Turkewitz cDNA (large ... 56 1e-11 3
(BM397347) 5009-0-31-D10.t.1 Chilcoat/Turkewitz cDNA (large ... 56 1e-11 3
(BM396860) 5009-0-25-H12.t.1 Chilcoat/Turkewitz cDNA (large ... 56 1e-11 3
(FF578424) TTEDH86THB Tetrahymena thermophila conjugation cD... 56 1e-11 3
(FF573707) TTEG158THC Tetrahymena thermophila conjugation cD... 56 1e-11 3
(CX591470) TTE00018851 Amplicon Express - Conjugative Form T... 56 1e-11 3
(DY684621) TTEAY33THC Tetrahymena thermophila EST library, c... 56 1e-11 3
(CX589100) TTE00027076 Amplicon Express - Conjugative Form T... 56 1e-11 3
(BM397823) 5009-0-37-E08.t.1 Chilcoat/Turkewitz cDNA (large ... 56 1e-11 3
(CX584637) TTE00035182 Amplicon Express - Conjugative Form T... 56 1e-11 3
(FK018940) GLND491TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 48 1e-11 3
(BM299619) MCR053A07_23766 Ice plant Lambda Uni-Zap XR expre... 60 1e-11 3
(AI731246) BNLGHi9006 Six-day Cotton fiber Gossypium hirsutu... 38 2e-11 4
(AM761671) Oopsacas minuta EST, 5' end sequence, clone IL0AF... 84 2e-11 1
(DT741821) EST1175670 Aquilegia cDNA library Aquilegia formo... 60 2e-11 3
(EH696229) CCIM8040.b1_P18.ab1 CCI(LMS) chicory Cichorium in... 52 3e-11 4
(EY117784) 1001G01 Heliothis virescens hemocyte Library Heli... 52 3e-11 3
(CR932696) Paramecium tetraurelia, Small GTPase rab, putativ... 64 3e-11 2
(DW088092) CLPY11935.b1_M07.ab1 CLP(XYZ) lettuce perennis La... 54 3e-11 2
(DW095120) CLPY6232.b1_O21.ab1 CLP(XYZ) lettuce perennis Lac... 54 3e-11 2
(DW083613) CLPX6353.b1_A06.ab1 CLP(XYZ) lettuce perennis Lac... 54 3e-11 2
(DW088525) CLPY12340.b1_G13.ab1 CLP(XYZ) lettuce perennis La... 54 3e-11 2
(FL613388) CAIG8279.fwd CAIG Postia placenta in rich medium ... 60 3e-11 2
(EV262838) MTYF040TF JCVI-MT1 Medicago truncatula cDNA 5', m... 72 3e-11 2
(FL626297) CATS1309.fwd CATS Postia placenta in Avicel mediu... 60 3e-11 2
(EC588385) W_W13_F01_11 W Rosa luciae cDNA clone W13F01, mRN... 66 3e-11 2
(FL626296) CATS1309.rev CATS Postia placenta in Avicel mediu... 60 3e-11 2
(DW095719) CLPY6798.b1_K20.ab1 CLP(XYZ) lettuce perennis Lac... 54 3e-11 2
(FL624527) CAIS414.rev CAIS Postia placenta in rich medium P... 60 3e-11 2
(FL624528) CAIS414.fwd CAIS Postia placenta in rich medium P... 60 3e-11 2
(CT777974) Paramecium tetraurelia 5-PRIME EST from clone LK0... 64 3e-11 2
(CT771208) Paramecium tetraurelia 5-PRIME EST from clone LK0... 64 3e-11 2
(CT740956) Paramecium tetraurelia 5-PRIME EST from clone LK0... 64 3e-11 2
(CT765061) Paramecium tetraurelia 5-PRIME EST from clone LK0... 64 3e-11 2
(CT752325) Paramecium tetraurelia 5-PRIME EST from clone LK0... 64 3e-11 2
(FL615422) CAIG9453.rev CAIG Postia placenta in rich medium ... 60 3e-11 2
(CT740310) Paramecium tetraurelia 5-PRIME EST from clone LK0... 64 3e-11 2
(CT804556) Paramecium tetraurelia 5-PRIME EST from clone LK0... 64 3e-11 2
(CT754562) Paramecium tetraurelia 5-PRIME EST from clone LK0... 64 3e-11 2
(FL596922) CAIG10459.fwd CAIG Postia placenta in rich medium... 60 3e-11 2
(CT782331) Paramecium tetraurelia 5-PRIME EST from clone LK0... 64 3e-11 2
(DV702636) CGN-49057 Seed of Late Development Stage Coffea c... 62 4e-11 3
(EY117785) 2002F16 Heliothis virescens hemocyte Library Heli... 52 4e-11 3
(DT741820) EST1175669 Aquilegia cDNA library Aquilegia formo... 60 4e-11 3
(DQ440351) Aedes aegypti clone AET-452 RAB protein mRNA, com... 50 4e-11 4
(AM852105) Venerupis (Ruditapes) decussatus EST, 5' end sequ... 52 4e-11 3
(DR940799) EST1132338 Aquilegia cDNA library Aquilegia formo... 60 5e-11 3
(DR940800) EST1132339 Aquilegia cDNA library Aquilegia formo... 60 5e-11 3
(DV304397) NABN514TR Aedes aegypti infected with Brugia Mala... 50 5e-11 4
(DV274174) NAAFI92TR Aedes aegypti - Fat Bodies Normalized (... 50 5e-11 4
(DV417007) NADZP43TR Aedes aegypti infected with Dengue viru... 50 5e-11 4
(AM821874) Nicotiana tabacum EST, clone nt005170041. 82 5e-11 2
(FG223287) Aats00557 Antheraea assama fifth instar larval te... 50 5e-11 3
(DV617522) EST1220518 Glossina morsitans morsitans Fat body ... 40 5e-11 3
(DV976045) GQ0066.TB.1_E03 GQ006: Cambium and phloem from ma... 50 5e-11 3
(EX436154) GQ04001.B7_M18 GQ040 - Shoot tip - Active growth ... 50 5e-11 3
(GE481059) GQ0202.B3.r_I14 GQ020: Clean ROOTS systems -Diurn... 50 5e-11 3
(DV985138) GQ0207.TB.1_G22 GQ020: Clean ROOTS systems -Diurn... 50 5e-11 3
(EX334180) GQ02907.B7_B01 GQ029 - Xylem scrapings - AT NITE ... 50 5e-11 3
(EX438146) GQ04007.B7_C04 GQ040 - Shoot tip - Active growth ... 50 5e-11 3
(EX332992) GQ02905.B7_H20 GQ029 - Xylem scrapings - AT NITE ... 50 5e-11 3
(ES261717) WS0394.C21_A14 SS-B-24 Picea sitchensis cDNA clon... 50 5e-11 3

>(M34457) Dictyostelium discoideum GTP-binding protein SAS1 gene,
complete cds.
Length = 989

Score = 638 bits (322), Expect(3) = 0.0
Identities = 322/322 (100%)
Strand = Plus / Plus


Query: 790 atcaatcaataaactacaaatttataatatagatattttttcgaaataatgacttctcca 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcaatcaataaactacaaatttataatatagatattttttcgaaataatgacttctcca 60


Query: 850 gcaacaaataaatcagcagcctacgattatttaattaaattacttttaatcggtgatagt 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaacaaataaatcagcagcctacgattatttaattaaattacttttaatcggtgatagt 120


Query: 910 ggtgtaggtaaatcatgtcttttattacgtttttctgaagattctttcacaccaagtttc 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtgtaggtaaatcatgtcttttattacgtttttctgaagattctttcacaccaagtttc 180


Query: 970 atcactactattggtatcgatttcaaaattcgtacaattgaattggaaggtaaaagaatt 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcactactattggtatcgatttcaaaattcgtacaattgaattggaaggtaaaagaatt 240


Query: 1030 aaattacaaatttgggatactgcaggtcaagaaagattcagaactatcactacagcatac 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaattacaaatttgggatactgcaggtcaagaaagattcagaactatcactacagcatac 300


Query: 1090 tatcgtggtgctatgggtatcc 1111
||||||||||||||||||||||
Sbjct: 301 tatcgtggtgctatgggtatcc 322

Score = 620 bits (313), Expect(3) = 0.0
Identities = 322/325 (99%)
Strand = Plus / Plus


Query: 1181 gcaacatgctacagactctgttaataaaatgttaaccggtaataaatgtgatatgcccga 1240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||
Sbjct: 390 gcaacatgctacagactctgttaataaaatgttaatcggtaataaatgtgatatggctga 449


Query: 1241 aaagaaagttgttgatagctcaagaggtaaatcacttgcagacgaatatggtattaaatt 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aaagaaagttgttgatagctcaagaggtaaatcacttgcagacgaatatggtattaaatt 509


Query: 1301 tttagaaacctcagccaaaaacagtataaatgtagaggaagcctttattagtttagcaaa 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tttagaaacctcagccaaaaacagtataaatgtagaggaagcctttattagtttagcaaa 569


Query: 1361 agatattaaaaaacgtatgattgatacaccaaatgaacaaccacaagttgttcaaccagg 1420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 agatattaaaaaacgtatgattgatacaccaaatgaacaaccacaagttgttcaaccagg 629


Query: 1421 tacaaatcttggtgcaaataacaataagaaaaaagcttgttgttaaattgggtgctattt 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tacaaatcttggtgcaaataacaataagaaaaaagcttgttgttaaattgggtgctattt 689


Query: 1481 taattttcacattatattattagat 1505
|||||||||||||||||||||||||
Sbjct: 690 taattttcacattatattattagat 714

Score = 139 bits (70), Expect(3) = 0.0
Identities = 70/70 (100%)
Strand = Plus / Plus


Query: 1111 cctattggtttatgatgtcactgatgaaaaatcttttggtaacattagaaattggattag 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctattggtttatgatgtcactgatgaaaaatcttttggtaacattagaaattggattag 380


Query: 1171 aaatatcgag 1180
||||||||||
Sbjct: 381 aaatatcgag 390

Score = 123 bits (62), Expect(3) = 1e-36
Identities = 68/70 (97%)
Strand = Plus / Plus


Query: 1549 gtcatcaaaattattcacctaaaaacataacatataaaccctcggtttcaaggcagagga 1608
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 758 gtcatcaaaattattcacctaaaaaaataacatataaaccctgggtttcaaggcagagga 817


Query: 1609 tgattcactt 1618
||||||||||
Sbjct: 818 tgattcactt 827

Score = 54.0 bits (27), Expect(3) = 1e-36
Identities = 27/27 (100%)
Strand = Plus / Plus


Query: 1725 ttgtgaagttgtgttgaaattaataag 1751
|||||||||||||||||||||||||||
Sbjct: 935 ttgtgaagttgtgttgaaattaataag 961

Score = 42.1 bits (21), Expect(3) = 1e-36
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 1753 agtgggaggtttatatcgcat 1773
|||||||||||||||||||||
Sbjct: 962 agtgggaggtttatatcgcat 982

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,978,035,009
Number of extensions: 131242461
Number of successful extensions: 12453423
Number of sequences better than 10.0: 6538
Length of query: 1942
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1918
Effective length of database: 96,409,374,237
Effective search space: 184913179786566
Effective search space used: 184913179786566
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 8. 2
Homology vs Protein
Query= Contig-U16277-1 (Contig-U16277-1Q) /CSM_Contig/Contig-U16277-1Q.Seq.d
(1942 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(P20790) RecName: Full=Ras-related protein Rab-8A; AltName: Full... 186 e-102
(P20791) RecName: Full=Ras-related protein Rab-8B; AltName: Full... 172 1e-85
AC125368_16(AC125368|pid:none) Medicago truncatula clone mth2-13... 158 2e-69
GM977153_1(GM977153|pid:none) Sequence 61 from Patent WO20081456... 158 5e-69
AB079020_1(AB079020|pid:none) Nicotiana tabacum mRNA for ras-rel... 158 5e-69
GN106033_1(GN106033|pid:none) Sequence 10814 from Patent WO20090... 158 9e-69
GN106127_1(GN106127|pid:none) Sequence 10908 from Patent WO20090... 157 1e-68
AB015475_6(AB015475|pid:none) Arabidopsis thaliana genomic DNA, ... 158 4e-68
AJ272025_1(AJ272025|pid:none) Colletotrichum lindemuthianum pt1 ... 157 6e-68
GN105943_1(GN105943|pid:none) Sequence 10724 from Patent WO20090... 158 1e-67
AB079024_1(AB079024|pid:none) Nicotiana tabacum mRNA for ras-rel... 156 1e-67
GN106011_1(GN106011|pid:none) Sequence 10792 from Patent WO20090... 158 1e-67
S57478(S57478) GTP-binding protein GTP13 - garden pea &Z49902_1... 155 1e-67
GN106091_1(GN106091|pid:none) Sequence 10872 from Patent WO20090... 155 1e-67
EF144772_1(EF144772|pid:none) Populus trichocarpa clone WS01118_... 157 2e-67
AJ001367_1(AJ001367|pid:none) Daucus carota mRNA for Rab8-like s... 157 2e-67
AF096249_1(AF096249|pid:none) Lycopersicon esculentum ethylene-r... 156 2e-67
GN106021_1(GN106021|pid:none) Sequence 10802 from Patent WO20090... 155 4e-67
GN106049_1(GN106049|pid:none) Sequence 10830 from Patent WO20090... 156 4e-67
GN106009_1(GN106009|pid:none) Sequence 10790 from Patent WO20090... 158 5e-67
GN106051_1(GN106051|pid:none) Sequence 10832 from Patent WO20090... 153 6e-67
Z73946_1(Z73946|pid:none) L.japonicus mRNA for small GTP-binding... 153 8e-67
AC117265_12(AC117265|pid:none) Oryza sativa (japonica cultivar-g... 158 1e-66
S33900(S33900;JQ2233) GTP-binding protein ypt2 - tomato &X69980... 157 1e-66
AL162751_30(AL162751|pid:none) Arabidopsis thaliana DNA chromoso... 155 2e-66
GM977111_1(GM977111|pid:none) Sequence 19 from Patent WO20081456... 155 3e-66
AY087058_1(AY087058|pid:none) Arabidopsis thaliana clone 3115 mR... 155 7e-66
BT070243_1(BT070243|pid:none) Picea sitchensis clone WS02711_M12... 158 2e-65
DQ393575_1(DQ393575|pid:none) Metarhizium anisopliae RAB/GTPase ... 157 2e-65
BT070448_1(BT070448|pid:none) Picea sitchensis clone WS0272_O15 ... 150 3e-65
AY576526_1(AY576526|pid:none) Oryza sativa (japonica cultivar-gr... 158 3e-65
GM977141_1(GM977141|pid:none) Sequence 49 from Patent WO20081456... 155 5e-65
S57474(S57474) GTP-binding protein - garden pea &Z49899_1(Z4989... 145 7e-65
AE017343_437(AE017343|pid:none) Cryptococcus neoformans var. neo... 155 7e-65
BT035355_1(BT035355|pid:none) Zea mays full-length cDNA clone ZM... 156 1e-64
GM977117_1(GM977117|pid:none) Sequence 25 from Patent WO20081456... 158 6e-64
AK104346_1(AK104346|pid:none) Oryza sativa Japonica Group cDNA c... 151 6e-64
AJ278658_1(AJ278658|pid:none) Aspergillus niger srgA gene for a ... 157 3e-62
CR954205_238(CR954205|pid:none) Ostreococcus tauri strain OTTH05... 149 3e-60
(P22128) RecName: Full=Ras-related protein Rab-8; AltName: Full=... 146 6e-60
BC142846_1(BC142846|pid:none) Danio rerio RAB8B, member RAS onco... 146 6e-60
BC134059_1(BC134059|pid:none) Danio rerio RAB8A, member RAS onco... 145 6e-60
S53268_1(S53268|pid:none) Homo sapiens RAS-related protein MEL (... 146 8e-60
BC129421_1(BC129421|pid:none) Danio rerio zgc:158741, mRNA (cDNA... 145 8e-60
BT081291_1(BT081291|pid:none) Caligus clemensi clone ccle-evs-51... 145 1e-59
BT080552_1(BT080552|pid:none) Caligus clemensi clone ccle-evs-51... 145 1e-59
BC127330_1(BC127330|pid:none) Xenopus tropicalis RAB8B, member R... 146 1e-59
BC135798_1(BC135798|pid:none) Xenopus tropicalis RAB8B, member R... 146 1e-59
(Q92930) RecName: Full=Ras-related protein Rab-8B; &AB038995_1(... 146 2e-59
AY892042_1(AY892042|pid:none) Synthetic construct Homo sapiens c... 146 4e-59
(P35280) RecName: Full=Ras-related protein Rab-8A; &(P55258) Re... 146 6e-59
BC078493_1(BC078493|pid:none) Xenopus laevis MGC85265 protein, m... 146 6e-59
AK147178_1(AK147178|pid:none) Mus musculus 17 days pregnant adul... 146 6e-59
I78851(I78851) GTP-binding protein MEL - mouse &S53270_1(S53270... 146 6e-59
GN105821_1(GN105821|pid:none) Sequence 10602 from Patent WO20090... 153 8e-59
(Q2HJI8) RecName: Full=Ras-related protein Rab-8B; &BC105330_1(... 146 8e-59
AB112929_1(AB112929|pid:none) Caenorhabditis elegans rab8 mRNA f... 146 2e-58
BT080187_1(BT080187|pid:none) Caligus clemensi clone ccle-evs-50... 141 3e-58
B38625(B38625)GTP-binding protein ora2 - electric ray (Discopyge... 146 4e-58
T33855(T33855)hypothetical protein D1037.4 - Caenorhabditis eleg... 146 7e-58
(Q5R4A3) RecName: Full=Ras-related protein Rab-8A; &CR861352_1(... 146 9e-58
AB112933_1(AB112933|pid:none) Drosophila melanogaster rab8 mRNA ... 143 2e-57
AP008213_447(AP008213|pid:none) Oryza sativa (japonica cultivar-... 127 9e-57
GN106121_1(GN106121|pid:none) Sequence 10902 from Patent WO20090... 140 4e-56
AJ277108_1(AJ277108|pid:none) Trichoderma reesei ypt1 gene for s... 140 6e-56
Z73945_1(Z73945|pid:none) L.japonicus mRNA for small GTP-binding... 119 8e-56
S51495(S51495;S70850)GTP-binding protein RYL1 - yeast (Yarrowia ... 146 1e-55
AC139707_26(AC139707|pid:none) Medicago truncatula clone mth2-16... 134 1e-55
(P33723) RecName: Full=GTP-binding protein ypt1; &AL356324_15(A... 140 1e-55
Z73932_1(Z73932|pid:none) L.japonicus mRNA for small GTP-binding... 137 1e-55
GN106077_1(GN106077|pid:none) Sequence 10858 from Patent WO20090... 137 2e-55
AJ278659_1(AJ278659|pid:none) Aspergillus niger srgB gene for a ... 140 3e-55
Y08425_1(Y08425|pid:none) N.plumbaginifolia mRNA for small GTP-b... 137 3e-55
GM977161_1(GM977161|pid:none) Sequence 69 from Patent WO20081456... 137 4e-55
BC097013_1(BC097013|pid:none) Danio rerio zgc:86773, mRNA (cDNA ... 141 5e-55
AF244545_1(AF244545|pid:none) Aspergillus awamori YptA (yptA) ge... 139 5e-55
D12547_1(D12547|pid:none) Pisum sativum mRNA for GTP-binding pro... 138 5e-55
BC045014_1(BC045014|pid:none) Xenopus laevis RAB1, member RAS on... 140 6e-55
(P22125) RecName: Full=Ras-related protein ORAB-1; &M38393_1(M3... 140 6e-55
EF146669_1(EF146669|pid:none) Populus trichocarpa clone WS01211_... 137 8e-55
AJ810707_1(AJ810707|pid:none) Poa pratensis mRNA for RAB1-like (... 136 8e-55
AJ307662_21(AJ307662|pid:none) Oryza sativa genomic DNA fragment... 137 1e-54
AK059888_1(AK059888|pid:none) Oryza sativa Japonica Group cDNA c... 137 1e-54
BT039522_1(BT039522|pid:none) Zea mays full-length cDNA clone ZM... 137 1e-54
DQ214474_1(DQ214474|pid:none) Taeniopygia guttata clone 0063P003... 140 1e-54
(P62820) RecName: Full=Ras-related protein Rab-1A; AltName: Full... 140 1e-54
AL606522_3(AL606522|pid:none) Mouse DNA sequence from clone RP23... 140 1e-54
(Q39571) RecName: Full=GTP-binding protein YPTC1; &DQ222936_1(D... 139 1e-54
GM977155_1(GM977155|pid:none) Sequence 63 from Patent WO20081456... 137 1e-54
BT051367_1(BT051367|pid:none) Medicago truncatula clone MTYF1_F2... 137 1e-54
D12548_1(D12548|pid:none) Pisum sativum mRNA for GTP-binding pro... 137 1e-54
AK297598_1(AK297598|pid:none) Homo sapiens cDNA FLJ52970 complet... 144 1e-54
EF103367_1(EF103367|pid:none) Haliotis discus discus Ras-related... 140 2e-54
BT070553_1(BT070553|pid:none) Picea sitchensis clone WS02735_N04... 139 2e-54
BT059700_1(BT059700|pid:none) Salmo salar clone ssal-rgf-002-342... 140 2e-54
CP000587_71(CP000587|pid:none) Ostreococcus lucimarinus CCE9901 ... 140 2e-54
DQ372931_1(DQ372931|pid:none) Pinus pinaster Rab1 mRNA, complete... 140 2e-54
GN106117_1(GN106117|pid:none) Sequence 10898 from Patent WO20090... 137 2e-54
AP008208_2028(AP008208|pid:none) Oryza sativa (japonica cultivar... 135 3e-54
J02998_1(J02998|pid:none) Rat ras-related protein mRNA, clone NT... 140 3e-54
(Q52NJ2) RecName: Full=Ras-related protein Rab-1A; &AY996813_1(... 140 3e-54
AK151085_1(AK151085|pid:none) Mus musculus bone marrow macrophag... 139 3e-54
GN106155_1(GN106155|pid:none) Sequence 10936 from Patent WO20090... 137 3e-54
EF144402_1(EF144402|pid:none) Populus trichocarpa clone PX0019_E... 137 3e-54
BT034664_1(BT034664|pid:none) Zea mays full-length cDNA clone ZM... 137 4e-54
AK129477_1(AK129477|pid:none) Mus musculus mRNA for mKIAA3012 pr... 139 5e-54
CP001323_241(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 141 5e-54
(Q05974) RecName: Full=Ras-related protein Rab-1A; &S38339(S383... 140 5e-54
GN106151_1(GN106151|pid:none) Sequence 10932 from Patent WO20090... 137 5e-54
DQ214475_1(DQ214475|pid:none) Taeniopygia guttata clone 0058P004... 138 7e-54
S06147(S06147;S03189)GTP-binding protein rab1B - rat 140 7e-54
EU284879_1(EU284879|pid:none) TSA: Elaeis guineensis EgEfMPOB000... 137 7e-54
DQ443136_1(DQ443136|pid:none) Bombyx mori small GTP binding prot... 136 9e-54
(Q01890) RecName: Full=Ras-like GTP-binding protein YPT1; &JC53... 140 9e-54
BT057068_1(BT057068|pid:none) Salmo salar clone ssal-eve-570-039... 140 9e-54
(Q2HJH2) RecName: Full=Ras-related protein Rab-1B; &BC105393_1(... 140 9e-54
(Q5RE13) RecName: Full=Ras-related protein Rab-1B; &(Q9H0U4) Re... 140 9e-54
(P40392) RecName: Full=Ras-related protein RIC1; &AK243597_1(AK... 137 9e-54
GM977149_1(GM977149|pid:none) Sequence 57 from Patent WO20081456... 137 9e-54
EF086613_1(EF086613|pid:none) Picea sitchensis clone WS02920_I20... 137 9e-54
L12031_1(L12031|pid:none) Leishmania major V121 GTP-binding prot... 138 9e-54
(Q9D1G1) RecName: Full=Ras-related protein Rab-1B; &AB232584_1(... 140 1e-53
D38625(D38625)GTP-binding protein o-rab1 - electric ray (Discopy... 140 1e-53
AC183496_25(AC183496|pid:none) Brassica oleracea, *** SEQUENCING... 137 1e-53
EF147099_1(EF147099|pid:none) Populus trichocarpa clone WS01227_... 133 1e-53
AE017352_188(AE017352|pid:none) Cryptococcus neoformans var. neo... 141 2e-53
GN105981_1(GN105981|pid:none) Sequence 10762 from Patent WO20090... 137 2e-53
(P10536) RecName: Full=Ras-related protein Rab-1B; &X13905_1(X1... 140 2e-53
BT070586_1(BT070586|pid:none) Picea sitchensis clone WS02737_M21... 137 2e-53
CS560194_1(CS560194|pid:none) Sequence 781 from Patent WO2006032... 137 2e-53
BC124978_1(BC124978|pid:none) Xenopus laevis hypothetical protei... 142 2e-53
AK042020_1(AK042020|pid:none) Mus musculus 3 days neonate thymus... 140 2e-53
CR533462_1(CR533462|pid:none) Homo sapiens full open reading fra... 139 2e-53
CS559708_1(CS559708|pid:none) Sequence 295 from Patent WO2006032... 137 2e-53
AY439005_1(AY439005|pid:none) Fucus distichus Rab family GTPase ... 130 3e-53
AF013572_1(AF013572|pid:none) Bombyx mori small GTP-binding prot... 139 3e-53
GN105977_1(GN105977|pid:none) Sequence 10758 from Patent WO20090... 136 3e-53
GN106165_1(GN106165|pid:none) Sequence 10946 from Patent WO20090... 134 3e-53
GN105857_1(GN105857|pid:none) Sequence 10638 from Patent WO20090... 131 3e-53
AM494964_85(AM494964|pid:none) Leishmania braziliensis chromosom... 138 3e-53
GM977167_1(GM977167|pid:none) Sequence 75 from Patent WO20081456... 132 3e-53
BT052509_1(BT052509|pid:none) Medicago truncatula clone MTYFD_FE... 137 4e-53
DQ414556_1(DQ414556|pid:none) Suberites domuncula Rab1 gene, com... 140 4e-53
AC104285_6(AC104285|pid:none) Oryza sativa (japonica cultivar-gr... 133 4e-53
GN106103_1(GN106103|pid:none) Sequence 10884 from Patent WO20090... 132 6e-53
BT051484_1(BT051484|pid:none) Medicago truncatula clone MTYF1_F2... 157 6e-53
B86153(B86153) ARA-5 [imported] - Arabidopsis thaliana &U89959_... 139 1e-52
BC094846_1(BC094846|pid:none) Homo sapiens RAB13, member RAS onc... 142 1e-52
GN106197_1(GN106197|pid:none) Sequence 10978 from Patent WO20090... 137 1e-52
CR382130_329(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 140 2e-52
GM977145_1(GM977145|pid:none) Sequence 53 from Patent WO20081456... 140 2e-52
(Q9DD03) RecName: Full=Ras-related protein Rab-13; &AK002303_1(... 142 2e-52
GN106061_1(GN106061|pid:none) Sequence 10842 from Patent WO20090... 139 2e-52
(Q5KTJ6) RecName: Full=Ras-related protein Rab-13; &AB158369_1(... 143 3e-52
(P11620) RecName: Full=GTP-binding protein ypt1; &AL136536_10(A... 140 3e-52
AC159407_36(AC159407|pid:none) Trypanosoma brucei chromosome 8 c... 138 4e-52
AY893729_1(AY893729|pid:none) Synthetic construct Homo sapiens c... 140 4e-52
(P51153) RecName: Full=Ras-related protein Rab-13; AltName: Full... 140 4e-52
GN106059_1(GN106059|pid:none) Sequence 10840 from Patent WO20090... 137 4e-52
EF145603_1(EF145603|pid:none) Populus trichocarpa clone WS01126_... 137 4e-52
AY060495_1(AY060495|pid:none) Arabidopsis thaliana AT4g17530/dl4... 137 4e-52
EF192426_1(EF192426|pid:none) Ipomoea batatas ARF small GTPase m... 105 4e-52
AB232608_1(AB232608|pid:none) Mus musculus mRNA for Rab13, compl... 142 5e-52
GN105853_1(GN105853|pid:none) Sequence 10634 from Patent WO20090... 138 5e-52
GN080089_1(GN080089|pid:none) Sequence 692 from Patent WO2009027... 138 5e-52
(P34140) RecName: Full=Ras-related protein Rab-1B; 138 6e-52
GM977157_1(GM977157|pid:none) Sequence 65 from Patent WO20081456... 137 6e-52
GN080135_1(GN080135|pid:none) Sequence 738 from Patent WO2009027... 136 8e-52
BT078127_1(BT078127|pid:none) Lepeophtheirus salmonis Pacific fo... 140 8e-52
(Q58DS5) RecName: Full=Ras-related protein Rab-13; &BT021522_1(... 139 8e-52
AF108883_1(AF108883|pid:none) Capsicum annuum small GTP-binding ... 137 8e-52
GN105859_1(GN105859|pid:none) Sequence 10640 from Patent WO20090... 137 8e-52
AC140549_18(AC140549|pid:none) Medicago truncatula clone mth2-28... 135 8e-52
GN080095_1(GN080095|pid:none) Sequence 698 from Patent WO2009027... 135 1e-51
GN106013_1(GN106013|pid:none) Sequence 10794 from Patent WO20090... 137 1e-51
AF101310_4(AF101310|pid:none) Caenorhabditis elegans cosmid C39F... 140 1e-51
GN106111_1(GN106111|pid:none) Sequence 10892 from Patent WO20090... 134 1e-51
BT077899_1(BT077899|pid:none) Lepeophtheirus salmonis Pacific fo... 139 2e-51
AF324990_1(AF324990|pid:none) Arabidopsis thaliana AT5g47200 (AT... 137 2e-51
BT077861_1(BT077861|pid:none) Lepeophtheirus salmonis Pacific fo... 140 2e-51
GN105983_1(GN105983|pid:none) Sequence 10764 from Patent WO20090... 137 2e-51
CP000497_244(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 142 3e-51
AE014297_3082(AE014297|pid:none) Drosophila melanogaster chromos... 141 3e-51
D12549_1(D12549|pid:none) Pisum sativum mRNA for GTP-binding pro... 137 3e-51
AC183493_34(AC183493|pid:none) Brassica oleracea Contig B, compl... 137 3e-51
AF330211_1(AF330211|pid:none) Candida albicans small GTP-binding... 142 4e-51
BT076429_1(BT076429|pid:none) Caligus rogercresseyi clone crog-e... 140 4e-51
(Q92928) RecName: Full=Putative Ras-related protein Rab-1C; ... 130 4e-51
AP007162_533(AP007162|pid:none) Aspergillus oryzae RIB40 genomic... 142 5e-51
(Q9ZRE2) RecName: Full=Ras-related protein RABD1; AltName: Full=... 135 5e-51
FM992688_325(FM992688|pid:none) Candida dubliniensis CD36 chromo... 142 7e-51
L48181_1(L48181|pid:none) Brassica campestris L. pekinensis ypt-... 135 7e-51
FN392321_231(FN392321|pid:none) Pichia pastoris GS115 chromosome... 141 1e-50
EU069503_1(EU069503|pid:none) Gymnochlora stellata Rab1B mRNA, c... 139 2e-50
(P07560) RecName: Full=Ras-related protein SEC4; AltName: Full=S... 143 3e-50
DQ397201_1(DQ397201|pid:none) Saccharum officinarum small GTP bi... 135 3e-50
(P34139) RecName: Full=Ras-related protein Rab-1A; 137 3e-50
BT071594_1(BT071594|pid:none) Picea sitchensis clone WS02926_J12... 134 3e-50
GM977163_1(GM977163|pid:none) Sequence 71 from Patent WO20081456... 134 4e-50
S34253(S34253) GTP-binding protein, ras-related - common tobacco... 135 5e-50
D01027_1(D01027|pid:none) Arabidopsis thaliana mRNA for small GT... 129 5e-50
CR859178_1(CR859178|pid:none) Pongo abelii mRNA; cDNA DKFZp459K2... 136 2e-49
(P61026) RecName: Full=Ras-related protein Rab-10; &(P61027) Re... 136 2e-49
AK008725_1(AK008725|pid:none) Mus musculus adult male stomach cD... 136 2e-49
BC060015_1(BC060015|pid:none) Xenopus laevis hypothetical protei... 136 2e-49
EF091876_1(EF091876|pid:none) Solanum tuberosum ras-related GTP ... 134 2e-49
BC009227_1(BC009227|pid:none) Homo sapiens RAB13, member RAS onc... 132 2e-49
(P24409) RecName: Full=Ras-related protein Rab-10; &D36364(D363... 136 2e-49
AL136650_1(AL136650|pid:none) Homo sapiens mRNA; cDNA DKFZp564L1... 136 3e-49
BC150404_1(BC150404|pid:none) Danio rerio zgc:171927, mRNA (cDNA... 141 3e-49
BT081293_1(BT081293|pid:none) Caligus clemensi clone ccle-evs-51... 141 3e-49
BT044760_1(BT044760|pid:none) Salmo salar clone ssal-rgf-502-322... 136 4e-49
CR382138_325(CR382138|pid:none) Debaryomyces hansenii strain CBS... 146 1e-48
BT076103_1(BT076103|pid:none) Caligus rogercresseyi clone crog-e... 134 1e-48
AY321327_1(AY321327|pid:none) Rattus norvegicus Ac2-048 mRNA, co... 120 2e-48
CR382125_525(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 144 2e-48
(P22127) RecName: Full=Ras-related protein Rab-10; Shor... 135 3e-48
AC183498_22(AC183498|pid:none) Brassica oleracea, *** SEQUENCING... 134 4e-48
CR382124_213(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 137 4e-48
Z73931_1(Z73931|pid:none) L.japonicus mRNA for small GTP-binding... 125 5e-48
AB006189_1(AB006189|pid:none) Drosophila melanogaster mRNA for R... 138 6e-48
L21010_1(L21010|pid:none) Dictyostelium discoideum Rab1B mRNA, 3... 126 8e-48
CP000499_197(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 147 1e-47
AE016815_434(AE016815|pid:none) Ashbya gossypii (= Eremothecium ... 137 1e-47
(P01123) RecName: Full=GTP-binding protein YPT1; AltName: Full=R... 135 1e-47
X00209_2(X00209|pid:none) Yeast YP2 gene The YP2 protein shows h... 135 1e-47
(O14462) RecName: Full=Ras-related protein SEC4; &AF015306_1(AF... 149 2e-47
CR380957_540(CR380957|pid:none) Candida glabrata strain CBS138 c... 135 2e-47
FN359283_3(FN359283|pid:none) Schistosoma mansoni genome sequenc... 135 3e-47
CU928171_789(CU928171|pid:none) Kluyveromyces thermotolerans str... 139 3e-47
DQ286060_1(DQ286060|pid:none) Hydra vulgaris RAS related GTP-bin... 141 4e-47
AB241241_1(AB241241|pid:none) Symbiotic protist of Reticuliterme... 121 1e-46
(P35281) RecName: Full=Ras-related protein Rab-10; &M83677_1(M8... 133 3e-46
T28971(T28971) hypothetical protein T23H2.5 - Caenorhabditis ele... 136 3e-46
FN357538_13(FN357538|pid:none) Schistosoma mansoni genome sequen... 133 5e-46
CR932686_1(CR932686|pid:none) Paramecium tetraurelia, Small GTPa... 121 7e-46
DQ414563_1(DQ414563|pid:none) Suberites domuncula Rab10 gene, co... 138 7e-46
CR932510_1(CR932510|pid:none) Paramecium tetraurelia, Small GTPa... 127 9e-46
AB054578_1(AB054578|pid:none) Entamoeba histolytica EhRab1A mRNA... 132 2e-45
DQ440351_1(DQ440351|pid:none) Aedes aegypti clone AET-452 RAB pr... 126 3e-45
AF542024_1(AF542024|pid:none) Griffithsia japonica GTP-binding p... 138 3e-45
FN320591_1(FN320591|pid:none) Schistosoma japonicum isolate Anhu... 137 3e-45
AY223134_1(AY223134|pid:none) Schistosoma japonicum SJCHGC02833 ... 137 3e-45
FN315276_1(FN315276|pid:none) Schistosoma japonicum isolate Anhu... 137 3e-45
AF389109_1(AF389109|pid:none) Entamoeba histolytica small GTP-bi... 125 6e-45
EU117168_1(EU117168|pid:none) Danio rerio Rab8 mRNA, partial cds. 145 8e-45
(O76173) RecName: Full=Ras-related protein Rab-1C; &AB015237_1(... 132 1e-44
CR932696_1(CR932696|pid:none) Paramecium tetraurelia, Small GTPa... 121 2e-44
AK051218_1(AK051218|pid:none) Mus musculus 12 days embryo spinal... 146 2e-44
AY893660_1(AY893660|pid:none) Synthetic construct Homo sapiens c... 128 3e-44
AB241230_1(AB241230|pid:none) Dinenympha exilis RsSmRab1_2 mRNA ... 121 3e-44
FN357316_32(FN357316|pid:none) Schistosoma mansoni genome sequen... 137 3e-44
CR932639_1(CR932639|pid:none) Paramecium tetraurelia, Small GTPa... 121 4e-44
BC077124_1(BC077124|pid:none) Danio rerio zgc:100812, mRNA (cDNA... 129 4e-44
AB172361_1(AB172361|pid:none) Macaca fascicularis brain cDNA clo... 146 4e-44
DQ414573_1(DQ414573|pid:none) Suberites domuncula Rab35 gene, co... 124 5e-44
AB241242_1(AB241242|pid:none) Symbiotic protist of Reticuliterme... 121 6e-44
AB241220_1(AB241220|pid:none) Pyrsonympha grandis RsSmRab1_1 mRN... 121 1e-43
BC068969_1(BC068969|pid:none) Xenopus laevis similar to RAB35, m... 128 2e-43
BC099268_1(BC099268|pid:none) Xenopus laevis similar to RAB35, m... 128 2e-43
BC041759_1(BC041759|pid:none) Xenopus laevis similar to RAB35, m... 128 2e-43
AB241243_1(AB241243|pid:none) Symbiotic protist of Reticuliterme... 126 2e-43
AX885835_1(AX885835|pid:none) Sequence 1698 from Patent EP1033401. 146 2e-43
BC057747_1(BC057747|pid:none) Xenopus laevis hypothetical protei... 128 2e-43
CR933412_1(CR933412|pid:none) Paramecium tetraurelia, Small GTPa... 122 3e-43
AM910992_200(AM910992|pid:none) Plasmodium knowlesi strain H chr... 134 3e-43
U28944_14(U28944|pid:none) Caenorhabditis elegans cosmid C18A3, ... 118 4e-43
(Q94986) RecName: Full=Ras-related protein Rab-3; &AB112928_1(A... 118 4e-43
CR933446_1(CR933446|pid:none) Paramecium tetraurelia, Small GTPa... 122 4e-43
AJ851375_1(AJ851375|pid:none) Gallus gallus mRNA for hypothetica... 128 4e-43
L49400_1(L49400|pid:none) Loligo pealii Rab3 gene, complete cds. 120 6e-43
DQ525204_1(DQ525204|pid:none) Bombyx mori ras-related GTP-bindin... 120 8e-43
AL117202_29(AL117202|pid:none) Caenorhabditis elegans YAC Y47D3A... 127 8e-43
AY896243_1(AY896243|pid:none) Trichomonas vaginalis strain G3 sm... 123 1e-42
AF014120_1(AF014120|pid:none) Strongylocentrotus purpuratus GTP-... 120 2e-42
AY324134_1(AY324134|pid:none) Babesia bovis Rab1a mRNA, complete... 136 2e-42
AY813938_1(AY813938|pid:none) Schistosoma japonicum SJCHGC06150 ... 138 2e-42
BX538352_67(BX538352|pid:none) Cryptosporidium parvum chromosome... 129 2e-42
BC061274_1(BC061274|pid:none) Xenopus tropicalis hypothetical pr... 128 3e-42
(P25228) RecName: Full=Ras-related protein Rab-3; &AB112932_1(A... 121 4e-42
M19885_1(M19885|pid:none) Bovine GTP-binding protein (smg p25A) ... 123 9e-42
U00986_1(U00986|pid:none) Aplysia californica Rab3 mRNA, complet... 118 9e-42
AM910992_188(AM910992|pid:none) Plasmodium knowlesi strain H chr... 131 1e-41
(P11023) RecName: Full=Ras-related protein Rab-3A; AltName: Full... 123 2e-41
S01765(S01765;C39963) GTP-binding protein rab3 - rat &X06889_1(... 123 2e-41
BC135626_1(BC135626|pid:none) Xenopus tropicalis RAB3A, member R... 123 6e-41
AF254795_1(AF254795|pid:none) Homo sapiens GTP-binding protein R... 122 6e-41
(Q9CZT8) RecName: Full=Ras-related protein Rab-3B; &AB232588_1(... 122 6e-41
(Q39570) RecName: Full=GTP-binding protein YPTC4; &JC4106(JC410... 107 6e-41
U68256_1(U68256|pid:none) Caenorhabditis elegans rab8-like mRNA,... 146 6e-41
(Q63941) RecName: Full=Ras-related protein Rab-3B; &Y14019_1(Y1... 122 7e-41
PDBN(3RAB)A MOL_ID: 1;MOL_ID: 1; MOLECULE: RAB3A; MOLECULE: RAB3... 123 1e-40
BX510928_2(BX510928|pid:none) Zebrafish DNA sequence from clone ... 120 1e-40
(P20337) RecName: Full=Ras-related protein Rab-3B; &AF498932_1(... 122 1e-40
EU090128_1(EU090128|pid:none) Aiptasia pulchella Rab3 mRNA, comp... 120 1e-40
EU069501_1(EU069501|pid:none) Gymnochlora stellata Rab1A1 mRNA, ... 132 1e-40
EZ000003_1(EZ000003|pid:none) TSA: Schistosoma japonicum SJCHGC0... 122 2e-40
BT078096_1(BT078096|pid:none) Lepeophtheirus salmonis Pacific fo... 129 2e-40
AY223137_1(AY223137|pid:none) Schistosoma japonicum clone ZZD146... 122 2e-40
(P34141) RecName: Full=Ras-related protein RabA; 114 2e-40
DQ836048_1(DQ836048|pid:none) Trichomonas vaginalis small Rab GT... 123 2e-40
AJ237914_1(AJ237914|pid:none) Plasmodium falciparum putative rab... 136 2e-40
AF201953_1(AF201953|pid:none) Plasmodium falciparum isolate FCC1... 136 2e-40
DQ222937_1(DQ222937|pid:none) Chlamydomonas incerta YptC1 (yptC1... 94 4e-40
FN357465_14(FN357465|pid:none) Schistosoma mansoni genome sequen... 121 5e-40
JC5066(JC5066) GTP-binding protein rab 3C - rat &U54807_1(U5480... 120 5e-40
BC075980_1(BC075980|pid:none) Danio rerio RAB3A, member RAS onco... 123 5e-40
(Q96E17) RecName: Full=Ras-related protein Rab-3C; &AY026936_1(... 120 6e-40
AY891536_1(AY891536|pid:none) Synthetic construct Homo sapiens c... 124 6e-40
(O95716) RecName: Full=Ras-related protein Rab-3D; &AF081353_1(... 124 6e-40
CR932581_1(CR932581|pid:none) Paramecium tetraurelia, Small GTPa... 114 6e-40
U41269_1(U41269|pid:none) Plasmodium falciparum Rab1 protein (Pf... 136 6e-40
U37099_1(U37099|pid:none) Rattus norvegicus small GTP-binding pr... 120 6e-40
AB209767_1(AB209767|pid:none) Homo sapiens mRNA for mel transfor... 144 7e-40
CR932504_1(CR932504|pid:none) Paramecium tetraurelia, Small GTPa... 117 1e-39
L21011_1(L21011|pid:none) Dictyostelium discoideum RabA mRNA, 3'... 113 2e-39
AK313538_1(AK313538|pid:none) Homo sapiens cDNA, FLJ94098, highl... 122 4e-39
A43958(A43958;C43958) GTP-binding protein, synaptic vesicle spec... 120 4e-39
AF169950_1(AF169950|pid:none) Tetrahymena thermophila putative i... 116 4e-39
EF125738_1(EF125738|pid:none) Nyctotherus ovalis Rab A61 gene, c... 123 5e-39
AL607070_4(AL607070|pid:none) Mouse DNA sequence from clone RP23... 122 8e-39
AY650355_1(AY650355|pid:none) Macaca fascicularis ras-associated... 114 8e-39
BT059766_1(BT059766|pid:none) Salmo salar clone ssal-rgf-510-347... 119 1e-38
BT045406_1(BT045406|pid:none) Salmo salar clone ssal-rgf-520-160... 121 1e-38
DQ414558_1(DQ414558|pid:none) Suberites domuncula Rab2 gene, com... 108 2e-38
BC082662_1(BC082662|pid:none) Xenopus laevis hypothetical LOC494... 120 3e-38
BC135348_1(BC135348|pid:none) Xenopus tropicalis RAB3B, member R... 119 3e-38
AY896281_1(AY896281|pid:none) Trichomonas vaginalis strain G3 sm... 122 4e-38
AC183495_42(AC183495|pid:none) Brassica oleracea Contig A, compl... 91 4e-38
BC074481_1(BC074481|pid:none) Xenopus laevis MGC84786 protein, m... 119 7e-38
BC074589_1(BC074589|pid:none) Xenopus tropicalis RAB3D, member R... 120 9e-38
(Q9TVU5) RecName: Full=Ras-related protein Rab-1; AltName: Full=... 119 1e-37
BC043857_1(BC043857|pid:none) Xenopus laevis similar to RAB3D, m... 120 1e-37
BX901942_4(BX901942|pid:none) Zebrafish DNA sequence from clone ... 120 1e-37
BC106308_1(BC106308|pid:none) Xenopus laevis similar to RAB3D, m... 120 1e-37
AY552054_1(AY552054|pid:none) Aedes aegypti RAB-like GTP binding... 126 1e-37
EU069500_1(EU069500|pid:none) Karlodinium micrum Rab1D mRNA, com... 122 1e-37
(P53994) RecName: Full=Ras-related protein Rab-2A; &AB232585_1(... 107 1e-37
AL161545_36(AL161545|pid:none) Arabidopsis thaliana DNA chromoso... 97 1e-37
(Q90965) RecName: Full=Ras-related protein Rab-2A; &S52325(S523... 107 2e-37
DQ397202_1(DQ397202|pid:none) Saccharum officinarum small GTP bi... 103 2e-37
(P49103) RecName: Full=Ras-related protein Rab-2-A; &T02242(T02... 103 2e-37
(Q96AX2) RecName: Full=Ras-related protein Rab-37; &AK098068_1(... 100 4e-37
CR932610_1(CR932610|pid:none) Paramecium tetraurelia, Small GTPa... 113 4e-37
AF468652_1(AF468652|pid:none) Homo sapiens RAB2B mRNA, complete ... 106 6e-37
BC071068_1(BC071068|pid:none) Xenopus laevis MGC78967 protein, m... 105 6e-37
BT043649_1(BT043649|pid:none) Salmo salar clone HM5_0924 RAB2A, ... 107 6e-37
AF083256_1(AF083256|pid:none) Sporobolus stapfianus small GTP bi... 103 6e-37
(Q39434) RecName: Full=Ras-related protein Rab2BV; &T14566(T145... 107 7e-37
BT037824_1(BT037824|pid:none) Zea mays full-length cDNA clone ZM... 104 7e-37
(P49104) RecName: Full=Ras-related protein Rab-2-B; &BT068076_1... 103 7e-37
BX647601_1(BX647601|pid:none) Homo sapiens mRNA; cDNA DKFZp313C1... 106 7e-37
(Q504M8) RecName: Full=Ras-related protein Rab-26; &AB232621_1(... 103 9e-37
BC066913_1(BC066913|pid:none) Homo sapiens RAB26, member RAS onc... 101 9e-37
BT080652_1(BT080652|pid:none) Caligus clemensi clone ccle-evs-51... 117 9e-37
(P61019) RecName: Full=Ras-related protein Rab-2A; &(P61105) Re... 107 9e-37
(Q05975) RecName: Full=Ras-related protein Rab-2; &S38341(S3834... 106 9e-37
S71559(S71559) GTP-binding protein rab2 - soybean &U32185_1(U32... 103 9e-37
Z73937_1(Z73937|pid:none) L.japonicus mRNA for small GTP-binding... 103 9e-37
AL161545_37(AL161545|pid:none) Arabidopsis thaliana DNA chromoso... 103 9e-37
E71440(E71440)GTP-binding protein RAB2A - Arabidopsis thaliana 103 9e-37
(Q9ULW5) RecName: Full=Ras-related protein Rab-26; &AY646153_1(... 101 1e-36
BC107443_1(BC107443|pid:none) Rattus norvegicus RAB2B, member RA... 106 1e-36
BT076392_1(BT076392|pid:none) Caligus rogercresseyi clone crog-e... 108 1e-36
BC054719_1(BC054719|pid:none) Mus musculus RAB2B, member RAS onc... 106 2e-36
(P59279) RecName: Full=Ras-related protein Rab-2B; &AB232586_1(... 106 2e-36
AE013599_198(AE013599|pid:none) Drosophila melanogaster chromoso... 106 2e-36
EF710656_1(EF710656|pid:none) Glyptapanteles indiensis clone BAC... 106 2e-36
EF144593_1(EF144593|pid:none) Populus trichocarpa clone WS01111_... 104 2e-36
AM432734_2(AM432734|pid:none) Vitis vinifera contig VV78X219500.... 107 2e-36
AE014297_3785(AE014297|pid:none) Drosophila melanogaster chromos... 106 2e-36
AY891305_1(AY891305|pid:none) Synthetic construct Homo sapiens c... 106 2e-36
BT077989_1(BT077989|pid:none) Lepeophtheirus salmonis Pacific fo... 108 2e-36
BT077488_1(BT077488|pid:none) Lepeophtheirus salmonis Pacific fo... 111 2e-36
L35845_1(L35845|pid:none) Oryza sativa small GTP-binding protein... 103 3e-36
AC093018_9(AC093018|pid:none) Oryza sativa chromosome 3 BAC OSJN... 107 3e-36
EF084887_1(EF084887|pid:none) Picea sitchensis clone WS0292_K24 ... 101 3e-36
D42148(D42148) GTP-binding protein rab13 - rat (fragment) &M836... 90 3e-36
BC075754_1(BC075754|pid:none) Danio rerio zgc:86635, mRNA (cDNA ... 115 3e-36
AC161399_25(AC161399|pid:none) Medicago truncatula chromosome 2 ... 103 3e-36
AB035352_1(AB035352|pid:none) Drosophila melanogaster mRNA for D... 106 4e-36
AY851657_1(AY851657|pid:none) Triticum aestivum small GTP-bindin... 103 4e-36
AB076904_1(AB076904|pid:none) Ciona intestinalis Ci-rab2 mRNA fo... 105 5e-36
T28972(T28972)hypothetical protein T23H2.6 - Caenorhabditis eleg... 136 6e-36
GN106149_1(GN106149|pid:none) Sequence 10930 from Patent WO20090... 103 6e-36
(Q40723) RecName: Full=Ras-related protein RGP2; AltName: Full=G... 103 6e-36
(P59190) RecName: Full=Ras-related protein Rab-15; &AX399903_1(... 114 6e-36
(P35289) RecName: Full=Ras-related protein Rab-15; &BC094954_1(... 114 6e-36
BT077156_1(BT077156|pid:none) Caligus rogercresseyi clone crog-e... 112 8e-36
AB197057_1(AB197057|pid:none) Entamoeba histolytica gene for sma... 104 8e-36
CR933454_1(CR933454|pid:none) Paramecium tetraurelia, Small GTPa... 103 8e-36
AK296062_1(AK296062|pid:none) Homo sapiens cDNA FLJ61124 complet... 96 8e-36
AE014298_1596(AE014298|pid:none) Drosophila melanogaster chromos... 112 1e-35
BT077510_1(BT077510|pid:none) Lepeophtheirus salmonis Pacific fo... 107 1e-35
FN357536_6(FN357536|pid:none) Schistosoma mansoni genome sequenc... 104 1e-35
(Q8K386) RecName: Full=Ras-related protein Rab-15; &AB232610_1(... 112 1e-35
AJ518934_1(AJ518934|pid:none) Hordeum vulgare subsp. vulgare mRN... 103 2e-35
AY232027_1(AY232027|pid:none) Drosophila yakuba clone yak-ad_Rab... 141 2e-35
U18771_1(U18771|pid:none) Rattus norvegicus Rab26 mRNA, complete... 97 2e-35
CR932703_1(CR932703|pid:none) Paramecium tetraurelia, Small GTPa... 129 2e-35
BT033192_1(BT033192|pid:none) Zea mays full-length cDNA clone ZM... 108 2e-35
BT037150_1(BT037150|pid:none) Zea mays full-length cDNA clone ZM... 108 2e-35
DQ019037_1(DQ019037|pid:none) Trichomonas vaginalis strain G3 sm... 110 2e-35
BC159385_1(BC159385|pid:none) Xenopus tropicalis hypothetical pr... 136 3e-35
FN314406_1(FN314406|pid:none) Schistosoma japonicum isolate Anhu... 110 3e-35
FN314407_1(FN314407|pid:none) Schistosoma japonicum isolate Anhu... 110 3e-35
(Q40193) RecName: Full=Ras-related protein Rab11C; &Z73951_1(Z7... 107 4e-35
GN106119_1(GN106119|pid:none) Sequence 10900 from Patent WO20090... 103 4e-35
EF145933_1(EF145933|pid:none) Populus trichocarpa clone WS0114_G... 107 4e-35
AK059799_1(AK059799|pid:none) Oryza sativa Japonica Group cDNA c... 101 4e-35
JC2528(JC2528)GTP-binding protein Rab26 - rat 96 4e-35
CR932644_1(CR932644|pid:none) Paramecium tetraurelia, Small GTPa... 129 5e-35
EU162609_23(EU162609|pid:none) Cleome spinosa clone contig83 BAC... 107 5e-35
CR933419_1(CR933419|pid:none) Paramecium tetraurelia, Small GTPa... 103 5e-35
AY231907_1(AY231907|pid:none) Drosophila yakuba clone yak-em_Rab... 141 5e-35
AY815772_1(AY815772|pid:none) Schistosoma japonicum SJCHGC09130 ... 110 6e-35
AY815506_1(AY815506|pid:none) Schistosoma japonicum SJCHGC02859 ... 109 6e-35
BT038097_1(BT038097|pid:none) Zea mays full-length cDNA clone ZM... 102 6e-35
AK046260_1(AK046260|pid:none) Mus musculus adult male corpora qu... 92 6e-35
EF457937_1(EF457937|pid:none) Lolium temulentum GTP-binding prot... 101 8e-35
CP000582_359(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 107 8e-35
EF678326_1(EF678326|pid:none) Picea sitchensis clone WS02914_M23... 108 1e-34
AB027137_1(AB027137|pid:none) Homo sapiens v46133 mRNA for RAB-2... 95 1e-34
EU960755_1(EU960755|pid:none) Zea mays clone 228324 unknown mRNA. 137 1e-34
CR932630_1(CR932630|pid:none) Paramecium tetraurelia, Small GTPa... 126 1e-34
(Q558I0) RecName: Full=Ras-related protein RabF1; 96 1e-34
CR933428_1(CR933428|pid:none) Paramecium tetraurelia, Small GTPa... 129 2e-34
BC048889_1(BC048889|pid:none) Danio rerio RAB11B, member RAS onc... 105 2e-34
BT084300_1(BT084300|pid:none) Zea mays full-length cDNA clone ZM... 100 2e-34
BT044659_1(BT044659|pid:none) Salmo salar clone ssal-rgf-002-097... 110 3e-34
AY896244_1(AY896244|pid:none) Trichomonas vaginalis strain G3 sm... 103 3e-34
GN080133_1(GN080133|pid:none) Sequence 736 from Patent WO2009027... 115 4e-34
(Q39572) RecName: Full=Ras-related protein YPTC6; &JC4108(JC410... 107 4e-34
AM484190_1(AM484190|pid:none) Vitis vinifera contig VV78X052697.... 105 4e-34
BC087584_1(BC087584|pid:none) Rattus norvegicus RAB8A, member RA... 82 4e-34
(P36409) RecName: Full=Ras-related protein Rab-2A; 101 5e-34
EU954271_1(EU954271|pid:none) Zea mays clone 1460642 ras-related... 107 7e-34
BT064760_1(BT064760|pid:none) Zea mays full-length cDNA clone ZM... 114 7e-34
GN080127_1(GN080127|pid:none) Sequence 730 from Patent WO2009027... 114 8e-34
BC076437_1(BC076437|pid:none) Danio rerio RAB30, member RAS onco... 107 8e-34
EU365390_1(EU365390|pid:none) Euplotes octocarinatus Rab GTPase ... 103 1e-33
BC055141_1(BC055141|pid:none) Danio rerio zgc:63565, mRNA (cDNA ... 108 1e-33
FN357326_31(FN357326|pid:none) Schistosoma mansoni genome sequen... 110 1e-33
BC118271_1(BC118271|pid:none) Bos taurus RAB2A, member RAS oncog... 107 1e-33
AC140549_17(AC140549|pid:none) Medicago truncatula clone mth2-28... 107 1e-33
AK169657_1(AK169657|pid:none) Mus musculus 2 days neonate thymus... 106 1e-33
AF363067_1(AF363067|pid:none) Entamoeba histolytica small GTP-bi... 125 1e-33
EF083999_1(EF083999|pid:none) Picea sitchensis clone WS0281_E05 ... 102 2e-33
GN080113_1(GN080113|pid:none) Sequence 716 from Patent WO2009027... 113 2e-33
(Q40523) RecName: Full=Ras-related protein Rab11A; &L29271_1(L2... 107 2e-33
BC096496_1(BC096496|pid:none) Mus musculus RAB27b, member RAS on... 100 2e-33
BT078211_1(BT078211|pid:none) Lepeophtheirus salmonis Pacific fo... 104 2e-33
AK071303_1(AK071303|pid:none) Oryza sativa Japonica Group cDNA c... 108 2e-33
EU810302_1(EU810302|pid:none) Gymnochlora stellata Ras-related s... 102 2e-33
BT087588_1(BT087588|pid:none) Zea mays full-length cDNA clone ZM... 115 2e-33
AJ851582_1(AJ851582|pid:none) Gallus gallus mRNA for hypothetica... 107 3e-33
AB016890_5(AB016890|pid:none) Arabidopsis thaliana genomic DNA, ... 106 3e-33
(P22129) RecName: Full=Ras-related protein Rab-11B; AltName: Ful... 107 4e-33
BC155534_1(BC155534|pid:none) Xenopus tropicalis hypothetical pr... 97 4e-33
FN357335_32(FN357335|pid:none) Schistosoma mansoni genome sequen... 101 4e-33
CR933417_1(CR933417|pid:none) Paramecium tetraurelia, Small GTPa... 113 4e-33
AC130603_13(AC130603|pid:none) Oryza sativa (japonica cultivar-g... 106 5e-33
(Q39222) RecName: Full=Ras-related protein RABA1b; AltName: Full... 106 5e-33
AB035354_1(AB035354|pid:none) Drosophila melanogaster mRNA for D... 108 5e-33
BT001785_1(BT001785|pid:none) Drosophila melanogaster RH21315 fu... 108 5e-33
AY904354_1(AY904354|pid:none) Gracilariopsis lemaneiformis small... 103 5e-33
T23530(T23530) hypothetical protein K09A9.2 - Caenorhabditis ele... 102 5e-33
AC116984_79(AC116984|pid:none) Dictyostelium discoideum chromoso... 92 7e-33
AC084818_20(AC084818|pid:none) Oryza sativa (japonica cultivar-g... 107 7e-33
DQ157704_1(DQ157704|pid:none) Aiptasia pulchella Rab11 protein m... 107 7e-33
BC152630_1(BC152630|pid:none) Danio rerio zgc:92772, mRNA (cDNA ... 107 7e-33
BC076247_1(BC076247|pid:none) Danio rerio zgc:92772, mRNA (cDNA ... 107 7e-33
AC011742_1(AC011742|pid:none) Homo sapiens BAC clone RP11-214J9 ... 86 7e-33
AY894025_1(AY894025|pid:none) Synthetic construct Homo sapiens c... 107 9e-33
AY220456_1(AY220456|pid:none) Limulus polyphemus rab11-2 mRNA, c... 108 9e-33
EU244432_1(EU244432|pid:none) Capra hircus RAB11B (rab11b) mRNA,... 107 9e-33
EF560724_1(EF560724|pid:none) Homo sapiens clone DKFZp564C1023 R... 107 9e-33
(P46638) RecName: Full=Ras-related protein Rab-11B; &A55005(A55... 107 9e-33
CR541691_1(CR541691|pid:none) Homo sapiens full open reading fra... 107 9e-33
BC081187_1(BC081187|pid:none) Xenopus laevis MGC84419 protein, m... 107 9e-33
(O35509) RecName: Full=Ras-related protein Rab-11B; &(Q15907) R... 107 9e-33
BT056265_1(BT056265|pid:none) Drosophila melanogaster FI09227 fu... 108 9e-33
(Q86YS6) RecName: Full=Ras-related protein Rab-43; AltName: Full... 107 9e-33
(Q6DHC1) RecName: Full=Ras-related protein Rab-18-B; &BC076054_... 112 9e-33
BC013790_1(BC013790|pid:none) Mus musculus RAB15, member RAS onc... 112 9e-33
CR933472_1(CR933472|pid:none) Paramecium tetraurelia, Small GTPa... 110 9e-33
BC082421_1(BC082421|pid:none) Xenopus laevis hypothetical LOC494... 107 1e-32
DQ414564_1(DQ414564|pid:none) Suberites domuncula Rab11 gene, co... 107 1e-32
AF127669_1(AF127669|pid:none) Mus musculus small GTPase (Rab11a)... 107 1e-32
JC2487(JC2487) GTP-binding protein H-YPT3 - human &X79780_1(X79... 106 1e-32
BT036850_1(BT036850|pid:none) Zea mays full-length cDNA clone ZM... 105 1e-32
(P28187) RecName: Full=Ras-related protein ARA-4; &AC004450_5(A... 100 1e-32
BC074609_1(BC074609|pid:none) Xenopus tropicalis RAB30, member R... 107 1e-32
AK014050_1(AK014050|pid:none) Mus musculus 13 days embryo head c... 120 1e-32
EU965206_1(EU965206|pid:none) Zea mays clone 284484 ras-related ... 105 2e-32
(Q15771) RecName: Full=Ras-related protein Rab-30; &(Q17QB7) Re... 106 2e-32
CR536494_1(CR536494|pid:none) Homo sapiens full open reading fra... 107 2e-32
BT069763_1(BT069763|pid:none) Zea mays full-length cDNA clone ZM... 105 2e-32
BT039097_1(BT039097|pid:none) Zea mays full-length cDNA clone ZM... 103 2e-32
DQ105562_1(DQ105562|pid:none) Euplotes octocarinatus Rab protein... 118 2e-32

>(P20790) RecName: Full=Ras-related protein Rab-8A; AltName:
Full=GTP-binding protein SAS1; &A34716(A34716;A61571)
&M34457_1(M34457|pid:none)
Length = 208

Score = 186 bits (473), Expect(3) = e-102
Identities = 92/94 (97%), Positives = 92/94 (97%)
Frame = +3

Query: 1182 QHATDSVNKMLTGNKCDMPEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAK 1361
QHATDSVNKML GNKCDM EKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAK
Sbjct: 115 QHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAK 174

Query: 1362 DIKKRMIDTPNEQPQVVQPGTNLGANNNKKKACC 1463
DIKKRMIDTPNEQPQVVQPGTNLGANNNKKKACC
Sbjct: 175 DIKKRMIDTPNEQPQVVQPGTNLGANNNKKKACC 208

Score = 182 bits (462), Expect(3) = e-102
Identities = 91/91 (100%), Positives = 91/91 (100%)
Frame = +1

Query: 838 MTSPATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELE 1017
MTSPATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELE
Sbjct: 1 MTSPATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELE 60

Query: 1018 GKRIKLQIWDTAGQERFRTITTAYYRGAMGI 1110
GKRIKLQIWDTAGQERFRTITTAYYRGAMGI
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGI 91

Score = 51.6 bits (122), Expect(3) = e-102
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +2

Query: 1112 LLVYDVTDEKSFGNIRNWIRNIE 1180
LLVYDVTDEKSFGNIRNWIRNIE
Sbjct: 92 LLVYDVTDEKSFGNIRNWIRNIE 114

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 2,037,591,403
Number of extensions: 31764581
Number of successful extensions: 99073
Number of sequences better than 10.0: 3605
Number of HSP's gapped: 97714
Number of HSP's successfully gapped: 7192
Length of query: 647
Length of database: 1,061,185,681
Length adjustment: 135
Effective length of query: 512
Effective length of database: 619,945,201
Effective search space: 317411942912
Effective search space used: 317411942912
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.71 gvh: 0.45 alm: 0.23 top: 0.27 tms: 0.13 mit: 0.34 mip: 0.04
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 1.00 m3b: 0.00 m_ : 0.00

32.0 %: mitochondrial
24.0 %: endoplasmic reticulum
20.0 %: plasma membrane
8.0 %: extracellular, including cell wall
4.0 %: Golgi
4.0 %: vesicles of secretory system
4.0 %: nuclear
4.0 %: peroxisomal

>> prediction for Contig-U16277-1 is mit

VS (DIR, S) 3
VH (FL, L) 0
VF (FL, S) 9
AH (FL, L) 0
AF (FL, S) 4
SL (DIR, L) 3
SS (DIR, S) 35
SH (FL, L) 0
SF (FL, S) 2
CH (FL, L) 0
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0