Contig-U00742-1
Contig ID Contig-U00742-1
Contig update 2001. 8.29
Contig sequence
>Contig-U00742-1 (Contig-U00742-1Q) /CSM_Contig/Contig-U00742-1Q.Seq.d
TAATTGATTTCGATGAATTATATAGATTAATTGAATTTATTATAAATAAA
TTTTTAAAAACTGGTAGTAAACGTGGTAGACGTAGTGAATCAGCTTGCGA
AATTATGAATTATCTTTATCAAATGTTACTTCAAAGAGAACTAGTTACAC
CAAAACAAGTTATAAAAGTTAATCAATTACTTCAATCACATTCAGTACCA
ATTAAACATTCATTATTCAATGCTTTCTATTATCTTCAAATTAGATCAGC
AAAATTCACAAAGTATATTTTATCAAGACCTGGTTTCGATAGTTTTTTCG
AAATTAATTATGAAGAGTCATATAGTTGTTCAATTGATTATTCTGAAGGT
GTGAATCATTTAGGCCAACATGGATTTGATTTGGCAATTTATTTAGATTT
CGATTGTTTTACATTTGATTATGTATTAGGTACCAATGAAAATGGTGATT
ATAATACACCATTCGATCAAGTACTCTATCGATTGGTTTATCAACTTTCT
CATAGTATAATTAATGAAATTGATATCATCGATGATTTCACTTCATTATC
AATGAATGCAGATTTAGAAT----------GTTTACCAACTATAAAATTC
AAATCCTTTCATTACCACAACATTCAATGACATCTCATTATAGTTATCTA
TTGGAATTCAATTATTTAATTAATAATCATTTTGAAAGAGTTAAAAATCC
AAATCTATTTAAAATTGATACATTAAAATCCGATAGTTTAAATTTTCCAA
CTGTTCTTAGCGCATATTTAGTCGACTATCTATCAAGATGTGATATTGGC
GAATATGAAAAATTCATGGATATTAAAACTAGAGAAGAGCTTTTAAATAT
TTTAATTTTTATAATTTATGCAGAGTATTGCATAAATATGGAATTAGATA
CCGATACCAATTTATCATTGGACAGAAAAAAATTACTTTTTCCACTCATT
GAATCTAAAGAATGTCAAGAAATTATTCAAAGAGCTTATGATAAATTTAA
AATTAAAAATGATGAAACTATAATCAGTCAAACTGAACAACAAATTAAAG
ATTACTCAACTCAAGTTGATAACATGTTTACTCTTGGTTTCATCAATGGT
GATATCATCATTTGTCAACTTATACTCAAACATTATCCAAATCTTTTCAA
AATCACCCAATATGCTTTGGCAATGGCAATAAAAGCTGATAGAATTCATA
TTATCAAGTTTTATTATCATAACAACAATGATAATTTAATTATGAATTTA
AAAGATGATCAATCATTAGTAGATTATTTAAAATCTGAACTTTTAAATCA
TCAAGATTATAAATTTGATATTAATTGGTTAAATTAAAAAAAAAAAAAAA
AAATGGAANTAANTTAGAANTTTTTTNTGAAAAAAAAAAATTNAAAAAAA
AAAAATTTTTTAAAAAAAAA

Gap gap included
Contig length 1410
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 2
Number of EST 4
Link to clone list U00742
List of clone(s)

est1=CFC106F,1,601
est2=CFC106Z,602,1329
est3=VSI859F,1020,1442
est4=VSI859Z,1020,1327
Translated Amino Acid sequence
IDFDELYRLIEFIINKFLKTGSKRGRRSESACEIMNYLYQMLLQRELVTPKQVIKVNQLL
QSHSVPIKHSLFNAFYYLQIRSAKFTKYILSRPGFDSFFEINYEESYSCSIDYSEGVNHL
GQHGFDLAIYLDFDCFTFDYVLGTNENGDYNTPFDQVLYRLVYQLSHSIINEIDIIDDFT
SLSMNADLE---

---FTNYKIQILSLPQHSMTSHYSYLLEFNYLINNHFERVKNPNLFKIDTLKSDSLNFPT
VLSAYLVDYLSRCDIGEYEKFMDIKTREELLNILIFIIYAEYCINMELDTDTNLSLDRKK
LLFPLIESKECQEIIQRAYDKFKIKNDETIISQTEQQIKDYSTQVDNMFTLGFINGDIII
CQLILKHYPNLFKITQYALAMAIKADRIHIIKFYYHNNNDNLIMNLKDDQSLVDYLKSEL
LNHQDYKFDINWLN*kkkkkmexx*xffxkkknxkkknflkk


Translated Amino Acid sequence (All Frames)
Frame A:
*lismnyid*lnll*inf*klvvnvvdvvnqlakl*iifikcyfken*lhqnkl*kliny
fnhiqyqlnihysmlsiifkldqqnsqsifyqdlvsivfsklimkshivvqliilkv*ii
*anmdliwqfi*isivlhlimy*vpmkmviiihhsikysidwfinfliv*lmklissmis
lhyq*mqi*n---

---vyql*nsnpfitttfndisl*lsigiqlfn**sf*ks*ksksi*n*yikir*fkfsn
cs*rifsrlsikm*ywri*kihgy*n*rrafkyfnfynlcrvlhkygiryryqfiigqkk
itfsth*i*rmsrnysksl**i*n*k**nynqsn*ttn*rllnss**hvyswfhqw*yhh
lstytqtlsksfqnhpicfgngnks**nsyyqvlls*qq**fnyefkr*siisrlfki*t
fkssrl*i*y*lvklkkkkkngxxlexfxekkkxkkkkffkkk

Frame B:
n*fr*ii*in*iyyk*ifknw**tw*t**islrnyelslsnvtskrtsytktsyks*sit
sitfstn*tfiiqcfllssn*iskihkvyfiktwfr*ffrn*l*rvi*lfn*lf*rcesf
rptwi*fgnlfrfrlfyi*lciryq*kw*l*ytirsstlsiglstfs*yn**n*yhr*fh
fiinecrfr---

---FTNYKIQILSLPQHSMTSHYSYLLEFNYLINNHFERVKNPNLFKIDTLKSDSLNFPT
VLSAYLVDYLSRCDIGEYEKFMDIKTREELLNILIFIIYAEYCINMELDTDTNLSLDRKK
LLFPLIESKECQEIIQRAYDKFKIKNDETIISQTEQQIKDYSTQVDNMFTLGFINGDIII
CQLILKHYPNLFKITQYALAMAIKADRIHIIKFYYHNNNDNLIMNLKDDQSLVDYLKSEL
LNHQDYKFDINWLN*kkkkkmexx*xffxkkknxkkknflkk

Frame C:
IDFDELYRLIEFIINKFLKTGSKRGRRSESACEIMNYLYQMLLQRELVTPKQVIKVNQLL
QSHSVPIKHSLFNAFYYLQIRSAKFTKYILSRPGFDSFFEINYEESYSCSIDYSEGVNHL
GQHGFDLAIYLDFDCFTFDYVLGTNENGDYNTPFDQVLYRLVYQLSHSIINEIDIIDDFT
SLSMNADLE---

---lptikfksfhyhniq*hliiviywnsii*liiilkelkiqiylklih*npiv*ifql
flahi*stiyqdvilanmknswilkleksf*if*fl*fmqsia*iwn*ipipiyhwtekn
yffhslnlknvkklfkelminlklkmmkl*svklnnklkitqlklitclllvssmvissf
vnlysniiqifskspnmlwqwq*kliefilssfiiittmii*l*i*kminh**ii*nlnf
*iikiinlilig*ikkkkkkwx*xrxfx*kkkixkkkif*kk

own update 2004. 6.21
Homology vs CSM-cDNA
Query= Contig-U00742-1 (Contig-U00742-1Q)
/CSM_Contig/Contig-U00742-1Q.Seq.d
(1420 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U00742-1 (Contig-U00742-1Q) /CSM_Contig/Conti... 2545 0.0
Contig-U12332-1 (Contig-U12332-1Q) /CSM_Contig/Conti... 86 2e-16
Contig-U14822-1 (Contig-U14822-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U12087-1 (Contig-U12087-1Q) /CSM_Contig/Conti... 40 0.009
Contig-U16115-1 (Contig-U16115-1Q) /CSM_Contig/Conti... 38 0.036
Contig-U15463-1 (Contig-U15463-1Q) /CSM_Contig/Conti... 38 0.036
Contig-U13389-1 (Contig-U13389-1Q) /CSM_Contig/Conti... 38 0.036
Contig-U12935-1 (Contig-U12935-1Q) /CSM_Contig/Conti... 38 0.036
Contig-U12512-1 (Contig-U12512-1Q) /CSM_Contig/Conti... 38 0.036
Contig-U12496-1 (Contig-U12496-1Q) /CSM_Contig/Conti... 38 0.036

>Contig-U00742-1 (Contig-U00742-1Q) /CSM_Contig/Contig-U00742-1Q.Seq.d
Length = 1420

Score = 2545 bits (1284), Expect = 0.0
Identities = 1328/1335 (99%)
Strand = Plus / Plus


Query: 1 taattgatttcgatgaattatatagattaattgaatttattataaataaatttttaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taattgatttcgatgaattatatagattaattgaatttattataaataaatttttaaaaa 60


Query: 61 ctggtagtaaacgtggtagacgtagtgaatcagcttgcgaaattatgaattatctttatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctggtagtaaacgtggtagacgtagtgaatcagcttgcgaaattatgaattatctttatc 120


Query: 121 aaatgttacttcaaagagaactagttacaccaaaacaagttataaaagttaatcaattac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatgttacttcaaagagaactagttacaccaaaacaagttataaaagttaatcaattac 180


Query: 181 ttcaatcacattcagtaccaattaaacattcattattcaatgctttctattatcttcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcaatcacattcagtaccaattaaacattcattattcaatgctttctattatcttcaaa 240


Query: 241 ttagatcagcaaaattcacaaagtatattttatcaagacctggtttcgatagttttttcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttagatcagcaaaattcacaaagtatattttatcaagacctggtttcgatagttttttcg 300


Query: 301 aaattaattatgaagagtcatatagttgttcaattgattattctgaaggtgtgaatcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaattaattatgaagagtcatatagttgttcaattgattattctgaaggtgtgaatcatt 360


Query: 361 taggccaacatggatttgatttggcaatttatttagatttcgattgttttacatttgatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taggccaacatggatttgatttggcaatttatttagatttcgattgttttacatttgatt 420


Query: 421 atgtattaggtaccaatgaaaatggtgattataatacaccattcgatcaagtactctatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgtattaggtaccaatgaaaatggtgattataatacaccattcgatcaagtactctatc 480


Query: 481 gattggtttatcaactttctcatagtataattaatgaaattgatatcatcgatgatttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gattggtttatcaactttctcatagtataattaatgaaattgatatcatcgatgatttca 540


Query: 541 cttcattatcaatgaatgcagatttagaatnnnnnnnnnngtttaccaactataaaattc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cttcattatcaatgaatgcagatttagaatnnnnnnnnnngtttaccaactataaaattc 600


Query: 601 aaatcctttcattaccacaacattcaatgacatctcattatagttatctattggaattca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaatcctttcattaccacaacattcaatgacatctcattatagttatctattggaattca 660


Query: 661 attatttaattaataatcattttgaaagagttaaaaatccaaatctatttaaaattgata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 attatttaattaataatcattttgaaagagttaaaaatccaaatctatttaaaattgata 720


Query: 721 cattaaaatccgatagtttaaattttccaactgttcttagcgcatatttagtcgactatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cattaaaatccgatagtttaaattttccaactgttcttagcgcatatttagtcgactatc 780


Query: 781 tatcaagatgtgatattggcgaatatgaaaaattcatggatattaaaactagagaagagc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tatcaagatgtgatattggcgaatatgaaaaattcatggatattaaaactagagaagagc 840


Query: 841 ttttaaatattttaatttttataatttatgcagagtattgcataaatatggaattagata 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ttttaaatattttaatttttataatttatgcagagtattgcataaatatggaattagata 900


Query: 901 ccgataccaatttatcattggacagnnnnnnnttactttttccactcattgaatctaaag 960
||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 901 ccgataccaatttatcattggacagaaaaaaattactttttccactcattgaatctaaag 960


Query: 961 aatgtcaagaaattattcaaagagcttatgataaatttaaaattaaaaatgatgaaacta 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aatgtcaagaaattattcaaagagcttatgataaatttaaaattaaaaatgatgaaacta 1020


Query: 1021 taatcagtcaaactgaacaacaaattaaagattactcaactcaagttgataacatgttta 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 taatcagtcaaactgaacaacaaattaaagattactcaactcaagttgataacatgttta 1080


Query: 1081 ctcttggtttcatcaatggtgatatcatcatttgtcaacttatactcaaacattatccaa 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ctcttggtttcatcaatggtgatatcatcatttgtcaacttatactcaaacattatccaa 1140


Query: 1141 atcttttcaaaatcacccaatatgctttggcaatggcaataaaagctgatagaattcata 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 atcttttcaaaatcacccaatatgctttggcaatggcaataaaagctgatagaattcata 1200


Query: 1201 ttatcaagttttattatcataacaacaatgataatttaattatgaatttaaaagatgatc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ttatcaagttttattatcataacaacaatgataatttaattatgaatttaaaagatgatc 1260


Query: 1261 aatcattagtagattatttaaaatctgaacttttaaatcatcaagattataaatttgata 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 aatcattagtagattatttaaaatctgaacttttaaatcatcaagattataaatttgata 1320


Query: 1321 ttaattggttaaatt 1335
|||||||||||||||
Sbjct: 1321 ttaattggttaaatt 1335


>Contig-U12332-1 (Contig-U12332-1Q) /CSM_Contig/Contig-U12332-1Q.Seq.d
Length = 1484

Score = 85.7 bits (43), Expect = 2e-16
Identities = 79/91 (86%)
Strand = Plus / Plus


Query: 190 attcagtaccaattaaacattcattattcaatgctttctattatcttcaaattagatcag 249
||||| ||||||| ||||||||||| || |||||||||||||||| | ||||||||||
Sbjct: 682 attcaataccaatcaaacattcattgtttcatgctttctattatctaaagattagatcag 741


Query: 250 caaaattcacaaagtatattttatcaagacc 280
| ||||| | |||||| ||||||||||||||
Sbjct: 742 ccaaatttataaagtacattttatcaagacc 772


Score = 30.2 bits (15), Expect = 8.9
Identities = 24/27 (88%)
Strand = Plus / Plus


Query: 804 tatgaaaaattcatggatattaaaact 830
||||||||||| ||| ||||| |||||
Sbjct: 1402 tatgaaaaatttatgaatattgaaact 1428


>Contig-U14822-1 (Contig-U14822-1Q) /CSM_Contig/Contig-U14822-1Q.Seq.d
Length = 1012

Score = 42.1 bits (21), Expect = 0.002
Identities = 24/25 (96%)
Strand = Plus / Plus


Query: 695 aaatccaaatctatttaaaattgat 719
||||||||||||||||| |||||||
Sbjct: 772 aaatccaaatctatttacaattgat 796


Database: CSM
Posted date: Jun 21, 2004 12:56 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 42,432
Number of Sequences: 8402
Number of extensions: 42432
Number of successful extensions: 5423
Number of sequences better than 10.0: 629
length of query: 1420
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1404
effective length of database: 7,941,110
effective search space: 11149318440
effective search space used: 11149318440
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 4.19
Homology vs DNA
Query= Contig-U00742-1 (Contig-U00742-1Q) /CSM_Contig/Contig-U00742-1Q.Seq.d
(1420 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ360244) Dictyostelium discoideum cDNA clone:ddc5k01, 5' e... 1130 0.0 1
(BJ373869) Dictyostelium discoideum cDNA clone:ddc5k01, 3' e... 682 0.0 3
(AU269350) Dictyostelium discoideum vegetative cDNA clone:VS... 668 0.0 1
(AU269351) Dictyostelium discoideum vegetative cDNA clone:VS... 611 e-170 1
(AF310885) Dictyostelium discoideum Rac1C (rac1C) gene, comp... 452 e-153 2
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 86 4e-12 1
(BJ414598) Dictyostelium discoideum cDNA clone:ddv19c22, 5' ... 86 4e-12 1
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 38 4e-05 23
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 38 5e-05 13
(X65223) T.rubrum mitochondrion genes for cytochrome oxidase... 56 6e-05 3
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 36 9e-05 19
(CP000814) Campylobacter jejuni subsp. jejuni 81116, complet... 50 4e-04 20
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 42 9e-04 15
(DK979106) Papilio xuthus mRNA, clone: PxutEST_ftfRN38h07, 5... 34 0.001 5
(EU621793) Pedetontus silvestrii mitochondrion, complete gen... 36 0.002 5
(Y18476) Trichophyton rubrum mitochondrial cytb gene and NAD... 56 0.004 1
(AL035475) Plasmodium falciparum MAL4P2. 34 0.005 17
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 38 0.006 12
(EK259167) 1095462086731 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.007 3
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 36 0.008 16
(EU677193) Oedogonium cardiacum strain SAG 575-1b chloroplas... 36 0.009 14
(BX248583) Blochmannia floridanus complete genome. 36 0.011 18
(AY531391) Schizaphis graminum mitochondrion, complete genome. 32 0.011 8
(CP000111) Prochlorococcus marinus str. MIT 9312, complete g... 38 0.013 22
(AM464349) Vitis vinifera contig VV78X041092.6, whole genome... 36 0.014 6
(CL049993) CH216-71H21_Sp6.1 CH216 Xenopus (Silurana) tropic... 54 0.015 1
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 40 0.016 15
(AC087615) Homo sapiens chromosome 4 clone RP11-147G13 map 4... 36 0.020 6
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 34 0.021 14
(EK509516) 1095515471638 Global-Ocean-Sampling_GS-32-01-01-1... 40 0.022 3
(EF621724) Papilio xuthus mitochondrion, partial genome. 34 0.023 7
(ER369435) 1093022169271 Global-Ocean-Sampling_GS-34-01-01-1... 48 0.024 2
(DQ866050) Simosyrphus grandicornis mitochondrion, complete ... 36 0.024 5
(EK551102) 1095516115936 Global-Ocean-Sampling_GS-32-01-01-1... 40 0.025 3
(AM440331) Vitis vinifera, whole genome shotgun sequence, co... 38 0.030 4
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 34 0.031 15
(AC233657) Medicago truncatula chromosome 6, pooled multiple... 38 0.033 8
(AM432493) Vitis vinifera contig VV78X214158.8, whole genome... 40 0.033 4
(AC162007) Bos taurus clone CH240-108B3, WORKING DRAFT SEQUE... 38 0.034 8
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 34 0.040 14
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 38 0.042 12
(AC174277) Medicago truncatula clone mth2-5i22, complete seq... 36 0.044 9
(AP009049) Clostridium kluyveri NBRC 12016 DNA, complete gen... 36 0.048 18
(AY916130) Epidermophyton floccosum mitochondrion, complete ... 48 0.050 4
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 36 0.053 8
(AE017245) Mycoplasma synoviae 53, complete genome. 36 0.054 19
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 36 0.055 14
(CU633451) M.truncatula DNA sequence from clone MTE1-13M3 on... 32 0.058 7
(AY863213) Smittium culisetae mitochondrion, complete genome. 38 0.058 8
(CP000673) Clostridium kluyveri DSM 555, complete genome. 36 0.058 18
(AM459398) Vitis vinifera contig VV78X085921.7, whole genome... 52 0.060 1
(EJ405017) 1093012082621 Global-Ocean-Sampling_GS-28-01-01-1... 52 0.060 1
(CN757155) ID0AAA1BD06RM1 ApMS Acyrthosiphon pisum cDNA clon... 52 0.060 1
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 40 0.062 20
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 36 0.063 17
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 36 0.064 12
(CP000742) Methanococcus vannielii SB, complete genome. 34 0.065 17
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 36 0.071 21
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com... 36 0.071 21
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 34 0.072 11
(EJ063279) 1095458012865 Global-Ocean-Sampling_GS-26-01-01-1... 40 0.077 2
(EK021409) 1092955327819 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.077 3
(AC130365) Homo sapiens chromosome 8, clone RP11-1195F20, co... 34 0.079 8
(EK237747) 1095460209037 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.079 3
(AM180355) Clostridium difficile 630 complete genome. 40 0.082 19
(AC140350) Mus musculus BAC clone RP24-251F16 from 3, comple... 38 0.082 9
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome. 36 0.082 13
(AC130339) Homo sapiens chromosome 8, clone RP13-941O14, com... 34 0.083 8
(AL844506) Plasmodium falciparum chromosome 7. 36 0.084 17
(AE014826) Plasmodium falciparum 3D7 chromosome 14 section 1... 40 0.090 11
(AC137078) Medicago truncatula clone mth2-10e12, complete se... 36 0.093 8
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ... 32 0.097 13
(DK969852) Papilio xuthus mRNA, clone: PxutEST_ftf16a02, 5' ... 34 0.10 4
(DK974373) Papilio xuthus mRNA, clone: PxutEST_ftfN34f05, 5'... 34 0.12 4
(DK973650) Papilio xuthus mRNA, clone: PxutEST_ftfN29g08, 5'... 34 0.13 4
(DK973510) Papilio xuthus mRNA, clone: PxutEST_ftfN28f05, 5'... 34 0.13 4
(AC006617) Caenorhabditis elegans cosmid C39B5, complete seq... 50 0.13 4
(DK974673) Papilio xuthus mRNA, clone: PxutEST_ftfN36d12, 5'... 34 0.13 4
(EB827062) 1086716 KZ01 Plodia interpunctella cDNA clone 556... 42 0.14 3
(DK969509) Papilio xuthus mRNA, clone: PxutEST_ftf13f10, 5' ... 34 0.15 4
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 38 0.15 8
(CU041372) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.16 9
(AX347089) Sequence 2160 from Patent WO0200928. 42 0.17 3
(AC094466) Rattus norvegicus clone CH230-4A7, WORKING DRAFT ... 50 0.18 5
(AM285307) Spiroplasma citri GII3-3X chromosome, contig Cont... 36 0.18 6
(CU695345) Brassica rapa subsp. pekinensis clone KBrH029J21,... 38 0.20 8
(AC211306) Populus trichocarpa clone POP004-K18, complete se... 34 0.23 9
(AL844507) Plasmodium falciparum chromosome 8. 34 0.23 16
(AC106541) Rattus norvegicus clone CH230-227O7, *** SEQUENCI... 50 0.24 1
(AC106533) Rattus norvegicus clone CH230-194C20, *** SEQUENC... 50 0.24 1
(CU463816) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.24 1
(AC006787) Caenorhabditis elegans clone Y48G9, *** SEQUENCIN... 50 0.24 1
(BH507909) BOGMW93TR BOGM Brassica oleracea genomic clone BO... 50 0.24 1
(BZ501471) BONQF86TF BO_1.6_2_KB_tot Brassica oleracea genom... 50 0.24 1
(BH957658) odf78g04.b1 B.oleracea002 Brassica oleracea genom... 50 0.24 1
(EE559646) BNZB_UP_047_E07_11MAY2004_055 Brassica napus BNZB... 50 0.24 1
(CP000538) Campylobacter jejuni subsp. jejuni 81-176, comple... 50 0.24 1
(AF547983) Schizosaccharomyces japonicus mitochondrial DNA, ... 34 0.24 9
(CP000382) Clostridium novyi NT, complete genome. 36 0.25 17
(AC208296) Glycine tomentella clone gtd1-66e2, WORKING DRAFT... 34 0.25 8
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 36 0.26 12
(EK112830) 1092963138779 Global-Ocean-Sampling_GS-31-01-01-1... 38 0.26 3
(AY572539) Neomaskellia andropogonis mitochondrion, complete... 44 0.28 4
(EK123057) 1092964806683 Global-Ocean-Sampling_GS-31-01-01-1... 38 0.28 3
(BX664626) Zebrafish DNA sequence from clone CH211-266O3 in ... 44 0.29 9
(AC006859) Caenorhabditis elegans clone Y47D9Y, *** SEQUENCI... 36 0.30 7
(AC006781) Caenorhabditis elegans clone Y47D9B, *** SEQUENCI... 36 0.30 7
(EJ681274) 1092955130911 Global-Ocean-Sampling_GS-30-02-01-1... 42 0.30 2
(AC141733) Apis mellifera clone CH224-58F20, WORKING DRAFT S... 36 0.31 12
(EK128241) 1092996300117 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.31 2
(EK297665) 1095462353225 Global-Ocean-Sampling_GS-31-01-01-1... 38 0.32 2
(AC150782) Medicago truncatula clone mth2-116a21, WORKING DR... 38 0.32 8
(CU076056) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 0.34 9
(AX392734) Sequence 24 from Patent WO0212526. 32 0.35 9
(AR707081) Sequence 24 from patent US 6933145. 32 0.35 9
(AY168953) Mycoplasma fermentans strain PG18 LicA (licA), an... 36 0.36 6
(EJ722625) 1092959462262 Global-Ocean-Sampling_GS-30-02-01-1... 42 0.38 2
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome. 34 0.40 17
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 36 0.40 17
(AC006780) Caenorhabditis elegans cosmid Y47D9A, complete se... 36 0.41 5
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s... 32 0.41 16
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 34 0.41 14
(BD061520) Genome DNA of symbiotic bacteria of aphid. 36 0.42 19
(AR409405) Sequence 1 from patent US 6632935. 36 0.42 19
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum... 36 0.42 19
(CP001158) Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisu... 36 0.43 19
(EU494536) Zaprionus lineosus voucher 103961 16S ribosomal R... 36 0.43 3
(EB828816) 1152492 KZ03 Plodia interpunctella cDNA clone 583... 42 0.43 3
(AY653733) Acanthamoeba polyphaga mimivirus, complete genome. 34 0.43 26
(EU358893) Myzus persicae 12S small subunit ribosomal RNA ge... 34 0.43 4
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 38 0.43 15
(BD453072) Diagnosis of Diseases Associated with tumor suppr... 36 0.45 5
(AX251551) Sequence 519 from Patent WO0168912. 36 0.45 5
(AC202545) Trichinella spiralis BAC clone TS195-8H12 from ch... 36 0.45 9
(ER404520) 1095353016486 Global-Ocean-Sampling_GS-34-01-01-1... 42 0.45 3
(AM285302) Spiroplasma citri GII3-3X chromosome, contig Cont... 34 0.46 9
(AY689436) Deerpox virus W-848-83, complete genome. 34 0.46 13
(EB823291) 1109414 CC04 Plodia interpunctella cDNA clone 573... 42 0.49 3
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 44 0.50 21
(AB083126) Glycine max ICHS1 pseudogene for chalcone synthase. 32 0.50 5
(BX469906) Zebrafish DNA sequence from clone DKEY-127K9 in l... 40 0.51 6
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 38 0.51 14
(CR925779) Zebrafish DNA sequence from clone DKEYP-53H3 in l... 44 0.51 8
(CK997149) ip15c02.b1 Brain - Cerebellum Library (DOGEST8) C... 34 0.53 3
(AC214597) Populus trichocarpa clone POP037-E17, complete se... 38 0.54 6
(CU914554) Brassica rapa subsp. pekinensis clone KBrH028O19,... 34 0.56 9
(AF442957) Ostrinia nubilalis mitochondrion, complete genome. 36 0.59 5
(AF467260) Ostrinia furnacalis mitochondrion, complete genome. 36 0.59 5
(X04465) Marchantia polymorpha chloroplast genome DNA. 32 0.62 11
(BX470234) Zebrafish DNA sequence from clone DKEY-94N12 in l... 38 0.63 7
(CF258226) 169 Trichoplusia ni fifth instar digestive system... 34 0.64 3
(CP000246) Clostridium perfringens ATCC 13124, complete genome. 38 0.67 18
(DD061426) Methods and nucleic acids for the analysis of he... 38 0.68 3
(DD061280) Methods and nucleic acids for the analysis of he... 38 0.68 3
(AX767510) Sequence 158 from Patent WO03044226. 38 0.68 3
(AX767434) Sequence 82 from Patent WO03044226. 38 0.68 3
(AX598988) Sequence 328 from Patent WO02077272. 38 0.68 3
(AX598842) Sequence 182 from Patent WO02077272. 38 0.68 3
(AE015927) Clostridium tetani E88, complete genome. 34 0.68 17
(CE786491) tigr-gss-dog-17000317769056 Dog Library Canis lup... 38 0.69 2
(CR377211) Zebrafish DNA sequence from clone DKEYP-13A3 in l... 40 0.71 6
(AP006086) Lotus japonicus genomic DNA, chromosome 1, clone:... 42 0.73 5
(CC501201) CH240_339K20.TARBAC13P2 CHORI-240 Bos taurus geno... 36 0.75 3
(AC094726) Rattus norvegicus clone CH230-5H16, *** SEQUENCIN... 38 0.76 7
(AP005672) Physcomitrella patens subsp. patens chloroplast D... 42 0.76 7
(DQ927304) Tetrahymena paravorax strain RP mitochondrion, co... 34 0.78 7
(AY347307) Penicillium marneffei strain MP1 mitochonrion, co... 34 0.78 4
(AM286280) Francisella tularensis subsp. tularensis strain F... 36 0.79 24
(AJ749949) Francisella tularensis subsp. tularensis SCHU S4 ... 36 0.79 24
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)... 38 0.79 16
(AF466146) Melipona bicolor mitochondrial genome, partial se... 34 0.79 6
(CP001161) Buchnera aphidicola str. 5A (Acyrthosiphon pisum)... 38 0.80 16
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 32 0.80 17
(EV839320) TT1ES08TV Tetrahymena thermophila SB210 cDNA libr... 38 0.82 3
(EK521076) 1095515519549 Global-Ocean-Sampling_GS-32-01-01-1... 36 0.82 3
(AL845417) Mouse DNA sequence from clone RP23-20I9 on chromo... 48 0.82 6
(CP000678) Methanobrevibacter smithii ATCC 35061, complete g... 36 0.83 18
(AM426422) Vitis vinifera contig VV78X044419.14, whole genom... 34 0.86 4
(CR940347) Theileria annulata genomic DNA chromosome 1 part 1. 34 0.87 19
(AF083031) Guillardia theta nucleomorph chromosome 3, comple... 32 0.90 12
(AC107801) Mus musculus, clone RP23-29M6, complete sequence. 48 0.94 1
(AM466068) Vitis vinifera contig VV78X007958.8, whole genome... 48 0.94 1
(AM436979) Vitis vinifera contig VV78X230681.5, whole genome... 48 0.94 1
(AM433052) Vitis vinifera contig VV78X003715.2, whole genome... 48 0.94 1
(AR584244) Sequence 1 from patent US 6797466. 48 0.94 1
(AR271569) Sequence 1 from patent US 6503729. 48 0.94 1
(Z74696) Human DNA sequence from clone RP1-203C2 on chromoso... 48 0.94 1
(AC103558) Homo sapiens chromosome 3 clone RP11-46B13, compl... 48 0.94 1
(AC097639) Homo sapiens chromosome 3 clone RP11-384L8, compl... 48 0.94 1
(AC012072) Homo sapiens BAC clone RP11-425J3 from 2, complet... 48 0.94 1
(AC160440) Bos taurus clone CH240-82B19, WORKING DRAFT SEQUE... 48 0.94 1
(AC107799) Mus musculus clone RP23-15O3, WORKING DRAFT SEQUE... 48 0.94 1
(AC103220) Rattus norvegicus clone CH230-48M6, *** SEQUENCIN... 48 0.94 1
(AC069416) Homo sapiens chromosome 3 clone RP11-119K13, WORK... 48 0.94 1
(CU062608) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.94 1
(AC234745) Brassica rapa subsp. pekinensis chromosome Linkag... 48 0.94 1
(AC218387) Bos taurus clone CH240-285C24, WORKING DRAFT SEQU... 48 0.94 1
(AC165492) Bos taurus clone CH240-172E10, WORKING DRAFT SEQU... 48 0.94 1
(AC012520) Homo sapiens chromosome 3 clone RP1-620I17, WORKI... 48 0.94 1
(AZ617503) 1M0448M18R Mouse 10kb plasmid UUGC1M library Mus ... 48 0.94 1
(CT362570) Sus scrofa genomic clone CH242-208G19, genomic su... 48 0.94 1
(CL882274) abf54e11.y1 Soybean random, unfiltered genomic li... 48 0.94 1
(L77117) Methanocaldococcus jannaschii DSM 2661, complete ge... 48 0.94 1
(EJ414964) 1093012175809 Global-Ocean-Sampling_GS-28-01-01-1... 40 0.94 3
(CT515215) A BAC library has been constructed from cultivar ... 34 0.94 3
(AP007924) Lotus japonicus genomic DNA, chromosome 1, clone:... 34 0.99 7
(EK502549) 1095505926466 Global-Ocean-Sampling_GS-32-01-01-1... 36 1.00 3
(AG061195) Pan troglodytes DNA, clone: PTB-049C18.F. 38 1.0 2
(FM977611) Glossina morsitans morsitans EST, clone GMsg114d1... 44 1.0 2
(AM485267) Vitis vinifera contig VV78X182047.14, whole genom... 36 1.0 7
(AB265433) Xanthorhoe hortensiaria gene for 16S rRNA, partia... 34 1.0 3
(AC174487) Strongylocentrotus purpuratus clone R3-3120P7, WO... 38 1.0 6
(CP000867) Methanococcus maripaludis C6, complete genome. 38 1.0 21
(EJ247710) 1095339010598 Global-Ocean-Sampling_GS-27-01-01-1... 36 1.1 3
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8... 32 1.1 16
(EJ718262) 1092959436159 Global-Ocean-Sampling_GS-30-02-01-1... 38 1.1 2
(ER322296) 1092344185932 Global-Ocean-Sampling_GS-34-01-01-1... 40 1.1 3
(AB265380) Arichanna tetrica gene for 16S rRNA, partial sequ... 36 1.1 3
(AP009033) Bombyx mori genomic DNA, chromosome 15, BAC clone... 34 1.1 7
(CP000728) Clostridium botulinum F str. Langeland, complete ... 36 1.1 16
(EJ239320) 1095328013181 Global-Ocean-Sampling_GS-27-01-01-1... 38 1.1 2
(EJ717931) 1092959434047 Global-Ocean-Sampling_GS-30-02-01-1... 38 1.1 2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 32 1.1 14
(AF452048) Pyrocoelia rufa mitochondrion, complete genome. 36 1.1 5
(AC130360) Homo sapiens chromosome 8, clone RP11-287P18, com... 34 1.2 7
(AC023311) Homo sapiens clone RP11-571M4, WORKING DRAFT SEQU... 42 1.2 4
(FH714718) CHO_OF5045xm18f1.ab1 CHO_OF5 Nicotiana tabacum ge... 44 1.2 2
(AM474429) Vitis vinifera contig VV78X056997.5, whole genome... 44 1.2 3
(FH671137) CHO_OF5030xc16f1.ab1 CHO_OF5 Nicotiana tabacum ge... 38 1.2 2
(AF252830) Homo sapiens chromosome 8 clone SCb-295j18 map p2... 34 1.2 7
(AM460235) Vitis vinifera, whole genome shotgun sequence, co... 36 1.2 5
(FJ171325) Polystoechotes punctatus mitochondrion, complete ... 34 1.2 6
(AJ010592) Guillardia theta DNA for complete sequence of nuc... 34 1.2 12
(AC006278) Plasmodium falciparum chromosome 12 clone PFYAC34... 36 1.2 11
(FH176042) CHO_OF3402xg09r1.ab1 CHO_OF3 Nicotiana tabacum ge... 38 1.2 2
(AM637390) Entamoeba dispar GSS, clone dispar45c03.p1k. 46 1.2 2
(FH076897) CHO_OF3699xo09f1.ab1 CHO_OF3 Nicotiana tabacum ge... 38 1.2 2
(ET828787) CHO_OF800xk09f1.ab1 CHO_OF Nicotiana tabacum geno... 38 1.2 2
(FH692998) CHO_OF5027xk08r1.ab1 CHO_OF5 Nicotiana tabacum ge... 44 1.2 2
(ED826502) MUGQ_CH252P157G09Sp6_GL476_041 CHORI-252 Vervet M... 46 1.2 2
(AC204176) Otolemur garnettii clone CH256-377F18, WORKING DR... 36 1.3 7
(AC112664) Mus musculus clone RP23-372H3, WORKING DRAFT SEQU... 36 1.3 10
(ER570531) 1093015790607 Global-Ocean-Sampling_GS-36-01-01-2... 38 1.3 2
(CP000025) Campylobacter jejuni RM1221, complete genome. 36 1.3 18
(AX344550) Sequence 1 from Patent WO0200932. 44 1.3 12
(AM285305) Spiroplasma citri GII3-3X chromosome, contig Cont... 34 1.3 10
(AC184060) Populus trichocarpa clone Pop1-106E15, complete s... 46 1.3 7
(AC234770) Brassica rapa subsp. pekinensis chromosome Linkag... 34 1.4 6
(AL073766) Drosophila melanogaster genome survey sequence TE... 34 1.4 3
(EU494509) Drosophila imparisetae voucher 109436 16S ribosom... 34 1.5 3
(AM480370) Vitis vinifera contig VV78X191698.2, whole genome... 32 1.5 5
(EU494519) Drosophila percnosoma voucher 105685 16S ribosoma... 34 1.5 3
(EU494434) Drosophila griseolineata voucher 103986 16S ribos... 34 1.5 3
(EU494523) Drosophila waddingtoni voucher 105707 16S ribosom... 34 1.5 3
(EU494522) Drosophila waddingtoni voucher 105687 16S ribosom... 34 1.5 3
(EU494429) Drosophila cardini voucher 103963 16S ribosomal R... 34 1.5 3
(DD010735) Diagnosis of known genetic Parameters within the ... 38 1.5 11
(AP009518) Solanum lycopersicum DNA, chromosome 8, clone: C0... 38 1.5 6
(AC144537) Glycine max clone gmw1-42i18, complete sequence. 36 1.6 7
(AM422018) Candidatus Phytoplasma australiense complete genome. 34 1.6 17
(EU168191) Heterosigma akashiwo strain CCMP 452 chloroplast,... 40 1.6 11
(CP000568) Clostridium thermocellum ATCC 27405, complete gen... 40 1.6 18
(AX344559) Sequence 10 from Patent WO0200932. 36 1.6 13
(CF258227) 170 Trichoplusia ni fifth instar digestive system... 34 1.7 3
(CU928823) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 1.7 9
(AY573115) Episyrphus balteatus 16S ribosomal RNA gene, part... 36 1.7 2
(AL138774) Human DNA sequence from clone RP4-780I11 on chrom... 36 1.7 6
(AC233648) Medicago truncatula, pooled multiple clones, *** ... 34 1.7 6
(CR936323) Medicago truncatula chromosome 5 clone mth2-155c8... 38 1.7 8
(AC141815) Apis mellifera clone CH224-61C4, WORKING DRAFT SE... 34 1.8 2
(CZ049939) OM__Ba0038J22.r OM__Ba Oryza minuta genomic clone... 34 1.8 3
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 38 1.9 16
(CU467757) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 1.9 2
(CU856050) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 1.9 2
(AP009195) Lotus japonicus genomic DNA, clone:LjT37D14, TM2127. 32 1.9 8
(AC200467) Rhesus Macaque BAC CH250-310K20 () complete sequ... 42 1.9 5
(AC216845) Populus trichocarpa clone POP068-B18, complete se... 38 2.0 8
(AC234413) Solanum lycopersicum chromosome 9 clone C09HBa007... 40 2.0 8
(AC116922) Dictyostelium discoideum chromosome 2 map 6061442... 34 2.0 7
(Z98551) Plasmodium falciparum MAL3P6. 32 2.0 9
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 34 2.1 14
(BY526950) Mus musculus NOD-derived CD11c +ve dendritic cell... 36 2.1 2
(BA000016) Clostridium perfringens str. 13 DNA, complete gen... 36 2.1 19
(CU915613) Zebrafish DNA sequence from clone CH1073-391H9 in... 36 2.1 2
(DQ102703) Coreana raphaelis mitochondrion, complete genome. 34 2.2 5
(AX345368) Sequence 439 from Patent WO0200928. 40 2.3 5
(AC229697) Medicago truncatula clone mth2-26c18, WORKING DRA... 38 2.3 9
(AF538053) Monosiga brevicollis mitochondrion, complete genome. 40 2.3 7
(CP000768) Campylobacter jejuni subsp. doylei 269.97, comple... 34 2.4 16
(AC152504) Pan troglodytes BAC clone RP43-147M24 from chromo... 36 2.4 8
(CS468864) Sequence 55 from Patent EP1748080. 34 2.4 11
(CS419341) Sequence 55 from Patent WO2006094836. 34 2.4 11
(AL772149) Mouse DNA sequence from clone RP23-108H7 on chrom... 36 2.5 10
(DE953234) Macropus eugenii DNA, BAC clone: MEB1-151P23_F, 5... 36 2.5 2
(AY521270) Schizaphis graminum cytochrome b (CYTB) gene, par... 32 2.5 4
(DE879377) Macropus eugenii DNA, BAC clone: MEB1-052A18_R, 3... 36 2.5 2
(CE804997) tigr-gss-dog-17000331468701 Dog Library Canis lup... 36 2.5 2
(CE522206) tigr-gss-dog-17000365658730 Dog Library Canis lup... 32 2.5 2
(AM285317) Spiroplasma citri GII3-3X chromosome, contig Cont... 32 2.6 8
(AC113424) Homo sapiens chromosome 5 clone RP11-624C4, compl... 36 2.6 6
(EJ590624) 1092961047988 Global-Ocean-Sampling_GS-29-01-01-1... 40 2.6 2
(AC168669) Strongylocentrotus purpuratus clone R3-3015I20, W... 38 2.6 6
(AX344572) Sequence 23 from Patent WO0200932. 42 2.6 11
(D31707) Psophocarpus tetragonolobus gene for putative Kunit... 34 2.7 3
(D31706) Psophocarpus tetragonolobus DNA, Kunitz chymotrypsi... 34 2.7 3
(AE017243) Mycoplasma hyopneumoniae J, complete genome. 36 2.7 18
(CP000976) Borrelia duttonii Ly, complete genome. 32 2.8 21
(AM470015) Vitis vinifera contig VV78X114602.3, whole genome... 40 3.0 3
(CP000312) Clostridium perfringens SM101, complete genome. 32 3.0 21
(BX511257) Zebrafish DNA sequence from clone DKEY-280E21 in ... 38 3.0 7
(AJ245479) Brassica napus subsp. napus Sll3, slk, srk, CePP,... 42 3.1 7
(AF252831) Homo sapiens chromosome 8 clone SCb-177k12 map 8p... 34 3.1 6
(EB828701) 1086922 KZ03 Plodia interpunctella cDNA clone 554... 44 3.2 2
(EJ823123) 1093017547443 Global-Ocean-Sampling_GS-30-02-01-1... 36 3.2 3
(AC206389) Papio anubis clone RP41-288G10, WORKING DRAFT SEQ... 36 3.2 6
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 34 3.2 15
(DQ366715) Uncultured Prochlorococcus marinus clone ASNC2259... 36 3.2 5
(CG770987) TcB50.2_C05_T7 Tribolium BAC library Tribolium ca... 32 3.2 3
(EB825088) 1086521 KZ01 Plodia interpunctella cDNA clone 556... 44 3.2 2
(EL926352) NY4ThAmp1_2_C07.b1_A039 NY4 theronts: amplified l... 32 3.2 3
(AX458578) Sequence 124 from Patent WO0246454. 40 3.3 8
(CP000727) Clostridium botulinum A str. Hall, complete genome. 36 3.3 14
(AE014851) Plasmodium falciparum 3D7 chromosome 12, section ... 32 3.3 15
(AM468572) Vitis vinifera contig VV78X242294.5, whole genome... 38 3.3 2
(CW399910) fsbb001f089p03k0 Sorghum methylation filtered lib... 36 3.4 2
(CG768357) TcB51.2_B10_SP6 Tribolium BAC library Tribolium c... 32 3.4 3
(AM433639) Vitis vinifera contig VV78X203213.19, whole genom... 36 3.4 4
(ER365328) 1093018986747 Global-Ocean-Sampling_GS-34-01-01-1... 36 3.4 3
(AE017308) Mycoplasma mobile 163K complete genome. 34 3.5 18
(EJ135309) 1092343595174 Global-Ocean-Sampling_GS-27-01-01-1... 36 3.5 3
(ER446604) 1092963832862 Global-Ocean-Sampling_GS-35-01-01-1... 38 3.5 3
(AM461859) Vitis vinifera contig VV78X074153.3, whole genome... 42 3.5 3
(AF466306) Dictyostelium discoideum ABC transporter AbcB3 (a... 32 3.5 4
(AC209271) Populus trichocarpa clone POP054-F16, complete se... 36 3.5 6
(CE646093) tigr-gss-dog-17000367189161 Dog Library Canis lup... 38 3.6 2
(AC147725) Otolemur garnettii clone CH256-269A1, WORKING DRA... 36 3.6 7
(CU655849) M.truncatula DNA sequence *** SEQUENCING IN PROGR... 32 3.6 11
(BJ442006) Dictyostelium discoideum cDNA clone:ddv48e14, 3' ... 42 3.6 2
(DL193797) Optimizing Expression of Active Botulinum Toxin T... 36 3.6 3
(DL193776) Optimizing Expression of Active Botulinum Toxin T... 36 3.6 3
(CS401766) Sequence 47 from Patent WO2006017749. 36 3.6 3
(CS401745) Sequence 26 from Patent WO2006017749. 36 3.6 3
(AC184758) Dasypus novemcinctus clone VMRC5-240K17, WORKING ... 36 3.6 8
(AZ446895) 1M0243G02R Mouse 10kb plasmid UUGC1M library Mus ... 36 3.7 2
(AB265421) Eupithecia proterva gene for 16S rRNA, partial se... 32 3.7 3
(AC216770) Populus trichocarpa clone POP051-A24, complete se... 36 3.7 6
(AE014843) Plasmodium falciparum 3D7 chromosome 11 section 8... 32 3.7 12
(CR384080) Zebrafish DNA sequence from clone DKEY-103G18 in ... 46 3.7 1
(CR318605) Zebrafish DNA sequence from clone DKEY-109C12 in ... 46 3.7 1
(AC201952) Rhesus Macaque BAC CH250-240E16 () complete sequ... 46 3.7 1
(AC196590) Rhesus Macaque BAC CH250-202D9 () complete seque... 46 3.7 1
(EF623858) Glycine max cultivar Williams 82 clone 28O17, com... 46 3.7 1
(CU914133) Medicago truncatula chromosome 5 clone mth2-150o3... 46 3.7 1
(CT009749) Medicago truncatula chromosome 5 clone mth2-46e3,... 46 3.7 1
(AM481608) Vitis vinifera, whole genome shotgun sequence, co... 46 3.7 1
(AM460720) Vitis vinifera contig VV78X104052.5, whole genome... 46 3.7 1
(AM449775) Vitis vinifera, whole genome shotgun sequence, co... 46 3.7 1
(AM444813) Vitis vinifera contig VV78X223499.3, whole genome... 46 3.7 1
(AX458501) Sequence 47 from Patent WO0246454. 46 3.7 1
(AF396436) Tetrahymena thermophila strain SB210 mitochondrio... 46 3.7 1
(AL445306) Human DNA sequence from clone RP11-62C22 on chrom... 46 3.7 1
(AC148416) Callithrix jacchus clone CH259-450G10, WORKING DR... 46 3.7 1
(AC141517) Rattus norvegicus clone CH230-159K16, WORKING DRA... 46 3.7 1
(AC123286) Rattus norvegicus clone CH230-358L10, *** SEQUENC... 46 3.7 1
(AC110987) Rattus norvegicus clone CH230-190O18, *** SEQUENC... 46 3.7 1
(AC105547) Rattus norvegicus clone CH230-201N9, WORKING DRAF... 46 3.7 1
(AC098989) Rattus norvegicus clone CH230-81J20, *** SEQUENCI... 46 3.7 1
(AC097997) Rattus norvegicus clone CH230-58J22, WORKING DRAF... 46 3.7 1
(AC096453) Rattus norvegicus clone CH230-41P1, WORKING DRAFT... 46 3.7 1
(FP102342) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.7 1
(CU928531) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.7 1
(CU928522) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.7 1
(CU856278) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.7 1
(CU694600) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.7 1
(CU633309) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.7 1
(CU618309) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.7 1
(CU442704) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.7 1
(CU062525) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.7 1
(AC224534) Bos taurus clone CH240-483A16, WORKING DRAFT SEQU... 46 3.7 1
(AC220970) Zea mays chromosome 5 clone CH201-316G17; ZMMBBc0... 46 3.7 1
(AC220866) Bos taurus clone CH240-343E19, WORKING DRAFT SEQU... 46 3.7 1
(AC212102) Zea mays chromosome 5 clone CH201-474K13; ZMMBBc0... 46 3.7 1
(AC194365) Zea mays chromosome 2 clone ZMMBBb-561O18; ZMMBBb... 46 3.7 1
(AC193702) Echinops telfairi clone CH238-367K14, WORKING DRA... 46 3.7 1
(AC173353) Strongylocentrotus purpuratus clone R3-4014P23, W... 46 3.7 1
(AC170389) Bos taurus clone CH240-215P17, WORKING DRAFT SEQU... 46 3.7 1
(AC167785) Glycine max clone gmw2-2o24, WORKING DRAFT SEQUEN... 46 3.7 1
(AC165484) Bos taurus clone CH240-172O24, WORKING DRAFT SEQU... 46 3.7 1
(FI255996) CccaBb033-F2JR CccABb Cajanus cajan genomic clone... 46 3.7 1
(EK104340) 1092963037971 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.7 1
(EJ880993) 1093018396513 Global-Ocean-Sampling_GS-30-02-01-1... 46 3.7 1
(EJ861648) 1093018203647 Global-Ocean-Sampling_GS-30-02-01-1... 46 3.7 1
(EJ700034) 1092956032047 Global-Ocean-Sampling_GS-30-02-01-1... 46 3.7 1
(EJ656506) 1092955007623 Global-Ocean-Sampling_GS-30-02-01-1... 46 3.7 1
(EJ399475) 1093012026509 Global-Ocean-Sampling_GS-28-01-01-1... 46 3.7 1
(EJ167349) 1092344070832 Global-Ocean-Sampling_GS-27-01-01-1... 46 3.7 1
(ED777618) GM_WBb0155E19.r GM_WBb Glycine max genomic clone ... 46 3.7 1
(ED711833) GM_WBb0059G14.f GM_WBb Glycine max genomic clone ... 46 3.7 1
(DX857601) ZMMBLj0004P05.r ZMMBLj Zea mays genomic clone ZMM... 46 3.7 1
(DX856491) ZMMBLj0003E19.r ZMMBLj Zea mays genomic clone ZMM... 46 3.7 1
(DX855934) ZMMBLj0002F10.f ZMMBLj Zea mays genomic clone ZMM... 46 3.7 1
(DX838070) ZMMBLh0013I13.r ZMMBLh Zea mays genomic clone ZMM... 46 3.7 1
(DX837828) ZMMBLh0012O06.f ZMMBLh Zea mays genomic clone ZMM... 46 3.7 1
(CZ301342) ZMMBF0076M18f ZMMBF Zea mays genomic clone ZMMBF0... 46 3.7 1
(CL008857) ZMMBBb0546N01r ZMMBBb (HindIII) Zea mays subsp. m... 46 3.7 1
(CX285721) kidney-2-G7-T3 Paralichthys olivaceus cDNA librar... 46 3.7 1
(CT725282) Danio rerio EST, clone ZF_mu_219l07 3'. 46 3.7 1
(CT725281) Danio rerio EST, clone ZF_mu_219l07 5'. 46 3.7 1
(CB453286) 708257 MARC 6BOV Bos taurus cDNA 5', mRNA sequence. 46 3.7 1
(FE029187) C0009265C22.P1KAM13F KN511 Ovis aries rectum and ... 46 3.7 1
(FC754108) CBBI7778.rev CBBI Lottia gigantea 26h,37h,61h Lar... 46 3.7 1
(EV849322) FTSAL86TF Tetrahymena thermophila SB210 cDNA libr... 46 3.7 1
(EV849187) FTSB159TF Tetrahymena thermophila SB210 cDNA libr... 46 3.7 1
(EV847345) FTSC222TF Tetrahymena thermophila SB210 cDNA libr... 46 3.7 1
(EV846468) FTSBB84TF Tetrahymena thermophila SB210 cDNA libr... 46 3.7 1
(EV844524) FMMAR79TF Tetrahymena thermophila SB210 cDNA libr... 46 3.7 1
(EV841350) FTSD080TF Tetrahymena thermophila SB210 cDNA libr... 46 3.7 1
(EV832155) FTSC877TF Tetrahymena thermophila SB210 cDNA libr... 46 3.7 1
(EV830180) FTSDG33TF Tetrahymena thermophila SB210 cDNA libr... 46 3.7 1
(EV829040) FTSAB49TF Tetrahymena thermophila SB210 cDNA libr... 46 3.7 1
(EV600246) Dmel_neb_007444_0917_0345 D. melanogaster - 454 s... 46 3.7 1
(EV596219) Dmel_neb_013120_0641_3694 D. melanogaster - 454 s... 46 3.7 1
(EV595202) Dmel_neb_012133_0568_2100 D. melanogaster - 454 s... 46 3.7 1
(EV594604) Dmel_neb_014916_0704_0414 D. melanogaster - 454 s... 46 3.7 1
(EV590874) Dmel_neb_013932_0317_3193 D. melanogaster - 454 s... 46 3.7 1
(EV590496) Dmel_neb_014314_0444_2306 D. melanogaster - 454 s... 46 3.7 1
(EV590468) Dmel_neb_014715_0407_2576 D. melanogaster - 454 s... 46 3.7 1
(EV590101) Dmel_neb_008768_0446_3581 D. melanogaster - 454 s... 46 3.7 1
(EV588764) Dmel_neb_012028_0109_1025 D. melanogaster - 454 s... 46 3.7 1
(EV587171) Dmel_neb_015568_0125_1383 D. melanogaster - 454 s... 46 3.7 1
(EV579085) Dmel_dig_008909_0702_2305 D. melanogaster - 454 s... 46 3.7 1
(CP001080) Sulfurihydrogenibium sp. YO3AOP1, complete genome. 46 3.7 1
(CP000227) Bacillus cereus Q1, complete genome. 46 3.7 1
(CP000001) Bacillus cereus E33L, complete genome. 46 3.7 1
(BX571856) Staphylococcus aureus subsp. aureus strain MRSA25... 46 3.7 1
(EJ901498) 1093018492367 Global-Ocean-Sampling_GS-30-02-01-1... 36 3.7 3
(AP009247) Candidatus Vesicomyosocius okutanii HA DNA, compl... 38 3.8 21
(AM778093) Carica papaya Y chromosome sequence, clone PH 69A08. 34 3.8 10
(AC137986) Medicago truncatula clone mth2-7g6, complete sequ... 36 3.9 9
(EK101463) 1092963019037 Global-Ocean-Sampling_GS-31-01-01-1... 38 3.9 3
(AB026661) Arabidopsis thaliana genomic DNA, chromosome 5, B... 40 3.9 5
(EK037636) 1092959482011 Global-Ocean-Sampling_GS-31-01-01-1... 42 3.9 2
(DQ029097) Haematobia irritans irritans mitochondrion, compl... 40 4.0 4
(CU571241) M.truncatula DNA sequence from clone MTH2-56A22 o... 36 4.0 6
(EU002242) Melianthus comosus NADH-plastoquinone oxidoreduct... 42 4.0 3
(AC093296) Homo sapiens chromosome 5 clone RP11-536I7, compl... 40 4.0 5
(AM461321) Vitis vinifera contig VV78X198049.32, whole genom... 34 4.0 5
(AC189598) Brassica rapa subsp. pekinensis clone KBrH014G16,... 40 4.1 6
(CP000726) Clostridium botulinum A str. ATCC 19397, complete... 36 4.1 14
(AC212921) Populus trichocarpa clone POP003-O05, complete se... 44 4.1 6
(AJ831716) Zygaena zuleima harchaica mitochondrial tRNA-Leu ... 28 4.1 5
(CP000361) Arcobacter butzleri RM4018, complete genome. 36 4.2 17
(CR932960) Medicago truncatula chromosome 5 clone mth4-7a5, ... 34 4.2 8
(FI198108) CccaBa020-J4TV CccABa Cajanus cajan genomic clone... 44 4.2 2
(AC174333) Medicago truncatula chromosome 6 clone mth2-152d9... 36 4.3 6
(EJ258912) 1095349028197 Global-Ocean-Sampling_GS-27-01-01-1... 36 4.3 3
(DQ927303) Tetrahymena malaccensis strain MP75 mitochondrion... 34 4.4 8
(AJ831589) Cacoecimorpha pronubana mitochondrial tRNA-Leu (C... 36 4.4 4
(DX448926) BE2017_L20_R IASMA L2 HindIII BAC library Vitis v... 42 4.4 2
(CU695297) Brassica rapa subsp. pekinensis clone KBrH036O23,... 34 4.4 7
(AX345844) Sequence 915 from Patent WO0200928. 36 4.4 4
(AX344560) Sequence 11 from Patent WO0200932. 30 4.4 14
(AC233772) Solanum lycopersicum chromosome 2 clone C02HBa006... 36 4.4 9
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 30 4.5 13
(AC234738) Brassica rapa subsp. pekinensis chromosome Linkag... 34 4.5 8
(DX531418) GH_MBb0031J20f GH_MBb Gossypium hirsutum genomic ... 32 4.5 3
(EK439126) 1095521450184 Global-Ocean-Sampling_GS-31-01-01-1... 44 4.5 2
(Z30339) P.reichenowi STARP gene for STARP antigen. 34 4.6 3
(AC162790) Mus musculus chromosome 3, clone RP24-397C18, com... 40 4.6 3
(U02970) Prototheca wickerhamii 263-11 complete mitochondria... 32 4.7 7
(CZ547684) SRAA-aad75e10.b1 Strongyloides ratti whole genome... 42 4.7 2
(DY604895) IMMUNEF054261F13 POSSUM_01-C-POSSUM-IMMUNE-2KB Tr... 44 4.8 2
(AC106877) Homo sapiens BAC clone RP11-579L4 from 4, complet... 38 4.8 3
(BX571827) Zebrafish DNA sequence from clone CH211-195M20 in... 38 4.8 7
(EJ252545) 1095344043851 Global-Ocean-Sampling_GS-27-01-01-1... 42 4.9 2
(AC193758) Trichinella spiralis BAC clone TS195-30H12 from c... 36 4.9 8
(AF335994) Lepidopsocid RS-2001 mitochondrion, complete genome. 28 4.9 7
(AL445564) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 34 4.9 12
(EK209489) 1095460093656 Global-Ocean-Sampling_GS-31-01-01-1... 38 4.9 2
(AC186921) Atelerix albiventris clone LB4-103A18, WORKING DR... 36 5.0 7
(AC160936) Mus musculus BAC clone RP23-300E17 from chromosom... 44 5.0 4
(EJ141429) 1092343655658 Global-Ocean-Sampling_GS-27-01-01-1... 38 5.0 2
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI... 32 5.1 14
(FG291364) 1108793338977 New World Screwworm Egg 9261 ESTs C... 36 5.1 2
(EK579125) 1095521388889 Global-Ocean-Sampling_GS-32-01-01-1... 40 5.1 2
(AY337263) Tetrahymena thermophila Golgi-associated cell div... 36 5.2 4
(AL844509) Plasmodium falciparum chromosome 13. 36 5.2 15
(AC164549) Mus musculus BAC clone RP24-273K1 from chromosome... 40 5.2 3
(AC152911) Loxodonta africana clone VMRC15-461K17, WORKING D... 36 5.2 4
(AC024697) Homo sapiens BAC clone RP11-9D6 from 2, complete ... 42 5.3 7
(CU019552) Zebrafish DNA sequence from clone CH73-242D19 in ... 38 5.4 3
(AC147468) Papio anubis clone RP41-115P5, WORKING DRAFT SEQU... 38 5.5 5
(CR855214) Oryza sativa genomic DNA, chromosome 4, BAC clone... 36 5.5 5
(AF338937) Lycaeides melissa isolate J3 control region, part... 32 5.5 3
(AY689437) Deerpox virus W-1170-84, complete genome. 30 5.5 12
(AC172865) Brassica rapa subsp. campestris clone KBrH001D17,... 40 5.6 7
(AC215944) Populus trichocarpa clone POP073-M17, complete se... 34 5.6 7
(DX536358) GH_MBb0076E04r GH_MBb Gossypium hirsutum genomic ... 36 5.7 2
(AL590865) Human DNA sequence *** SEQUENCING CANCELLED *** f... 32 5.7 10
(AC067719) Homo sapiens 3 BAC RP11-183L23 (Roswell Park Canc... 34 5.8 8

>(BJ360244) Dictyostelium discoideum cDNA clone:ddc5k01, 5' end,
single read.
Length = 571

Score = 1130 bits (570), Expect = 0.0
Identities = 570/570 (100%)
Strand = Plus / Plus


Query: 1 taattgatttcgatgaattatatagattaattgaatttattataaataaatttttaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taattgatttcgatgaattatatagattaattgaatttattataaataaatttttaaaaa 60


Query: 61 ctggtagtaaacgtggtagacgtagtgaatcagcttgcgaaattatgaattatctttatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctggtagtaaacgtggtagacgtagtgaatcagcttgcgaaattatgaattatctttatc 120


Query: 121 aaatgttacttcaaagagaactagttacaccaaaacaagttataaaagttaatcaattac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatgttacttcaaagagaactagttacaccaaaacaagttataaaagttaatcaattac 180


Query: 181 ttcaatcacattcagtaccaattaaacattcattattcaatgctttctattatcttcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcaatcacattcagtaccaattaaacattcattattcaatgctttctattatcttcaaa 240


Query: 241 ttagatcagcaaaattcacaaagtatattttatcaagacctggtttcgatagttttttcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttagatcagcaaaattcacaaagtatattttatcaagacctggtttcgatagttttttcg 300


Query: 301 aaattaattatgaagagtcatatagttgttcaattgattattctgaaggtgtgaatcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaattaattatgaagagtcatatagttgttcaattgattattctgaaggtgtgaatcatt 360


Query: 361 taggccaacatggatttgatttggcaatttatttagatttcgattgttttacatttgatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taggccaacatggatttgatttggcaatttatttagatttcgattgttttacatttgatt 420


Query: 421 atgtattaggtaccaatgaaaatggtgattataatacaccattcgatcaagtactctatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgtattaggtaccaatgaaaatggtgattataatacaccattcgatcaagtactctatc 480


Query: 481 gattggtttatcaactttctcatagtataattaatgaaattgatatcatcgatgatttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gattggtttatcaactttctcatagtataattaatgaaattgatatcatcgatgatttca 540


Query: 541 cttcattatcaatgaatgcagatttagaat 570
||||||||||||||||||||||||||||||
Sbjct: 541 cttcattatcaatgaatgcagatttagaat 570

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,938,422,193
Number of extensions: 128248833
Number of successful extensions: 12003502
Number of sequences better than 10.0: 624
Length of query: 1420
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1396
Effective length of database: 99,340,224,878
Effective search space: 138678953929688
Effective search space used: 138678953929688
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.14
Homology vs Protein
Query= Contig-U00742-1 (Contig-U00742-1Q) /CSM_Contig/Contig-U00742-1Q.Seq.d
(1420 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC116977_3(AC116977|pid:none) Dictyostelium discoideum chromosom... 180 1e-43
AC116985_1(AC116985|pid:none) Dictyostelium discoideum chromosom... 137 7e-31
AC116922_12(AC116922|pid:none) Dictyostelium discoideum chromoso... 119 4e-25
AC116922_10(AC116922|pid:none) Dictyostelium discoideum chromoso... 117 1e-24
AC115683_6(AC115683|pid:none) Dictyostelium discoideum chromosom... 116 2e-24
AC116922_7(AC116922|pid:none) Dictyostelium discoideum chromosom... 115 3e-24
AC115683_2(AC115683|pid:none) Dictyostelium discoideum chromosom... 114 7e-24
AC115579_2(AC115579|pid:none) Dictyostelium discoideum chromosom... 111 6e-23
AC115683_4(AC115683|pid:none) Dictyostelium discoideum chromosom... 103 2e-20
AC116924_12(AC116924|pid:none) Dictyostelium discoideum chromoso... 99 5e-19
AC116922_9(AC116922|pid:none) Dictyostelium discoideum chromosom... 84 1e-14
AC115579_3(AC115579|pid:none) Dictyostelium discoideum chromosom... 76 3e-12
AC117070_28(AC117070|pid:none) Dictyostelium discoideum chromoso... 70 1e-10
AC116984_187(AC116984|pid:none) Dictyostelium discoideum chromos... 62 7e-08
AC116922_5(AC116922|pid:none) Dictyostelium discoideum chromosom... 57 1e-06
AC117176_50(AC117176|pid:none) Dictyostelium discoideum chromoso... 54 1e-05
AC114263_13(AC114263|pid:none) Dictyostelium discoideum chromoso... 52 5e-05
T18288(T18288)ABC transport protein - slime mold (Dictyostelium ... 45 0.006
AE001439_414(AE001439|pid:none) Helicobacter pylori J99, complet... 41 0.12
CP001072_438(CP001072|pid:none) Helicobacter pylori Shi470, comp... 40 0.16
AE014185_129(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.36
CP000048_815(CP000048|pid:none) Borrelia hermsii DAH, complete g... 38 0.79
AF250284_183(AF250284|pid:none) Amsacta moorei entomopoxvirus, c... 38 1.0
BX571658_95(BX571658|pid:none) Wolinella succinogenes, complete ... 38 1.0
AP008971_966(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 38 1.0
AP008971_1486(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA... 37 1.3
(Q6BK59) RecName: Full=Protein SEY1; &CR382138_1066(CR382138|pi... 37 1.8
AE000511_462(AE000511|pid:none) Helicobacter pylori 26695, compl... 37 1.8
CP001173_412(CP001173|pid:none) Helicobacter pylori G27, complet... 37 1.8
AY522576_1(AY522576|pid:none) Tetrahymena thermophila telomerase... 37 2.3
AM398681_1590(AM398681|pid:none) Flavobacterium psychrophilum JI... 37 2.3
AL929356_17(AL929356|pid:none) Plasmodium falciparum strain 3D7,... 36 3.0
AL844508_85(AL844508|pid:none) Plasmodium falciparum 3D7 chromos... 36 3.0
CP001184_479(CP001184|pid:none) Ureaplasma urealyticum serovar 1... 36 3.0
BA000026_320(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c... 35 5.1
CP001206_35(CP001206|pid:none) Borrelia burgdorferi ZS7 plasmid ... 35 5.1
(Q54B49) RecName: Full=Probable polyketide synthase 45; ... 35 5.1
T24144(T24144) hypothetical protein R10E8.3 - Caenorhabditis ele... 35 5.1
AE014188_472(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 35 5.1
CP000095_1791(CP000095|pid:none) Prochlorococcus marinus str. NA... 35 6.7
(Q660H3) RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; ... 35 6.7
AK027680_1(AK027680|pid:none) Homo sapiens cDNA FLJ14774 fis, cl... 35 6.7
FM864216_249(FM864216|pid:none) Mycoplasma conjunctivae HRC/581T... 35 6.7
BC108311_1(BC108311|pid:none) Homo sapiens leucine proline-enric... 35 6.7
AK297980_1(AK297980|pid:none) Homo sapiens cDNA FLJ53395 complet... 35 6.7
CR382139_915(CR382139|pid:none) Debaryomyces hansenii strain CBS... 35 6.7
AE014187_611(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 35 6.7
AY528224_1(AY528224|pid:none) Danio rerio L-type calcium channel... 35 6.7
AK027648_1(AK027648|pid:none) Homo sapiens cDNA FLJ14742 fis, cl... 35 8.7
CP000962_1736(CP000962|pid:none) Clostridium botulinum A3 str. L... 35 8.7
D64424(D64424)tldD homolog MJ0996 - Methanococcus jannaschii 35 8.7
AK300210_1(AK300210|pid:none) Homo sapiens cDNA FLJ54152 complet... 35 8.7

>AC116977_3(AC116977|pid:none) Dictyostelium discoideum chromosome 2
map 5515173-5817331 strain AX4, complete sequence.
Length = 1462

Score = 180 bits (456), Expect = 1e-43
Identities = 101/258 (39%), Positives = 155/258 (60%), Gaps = 10/258 (3%)
Frame = +3

Query: 588 NYKIQILSLPQHSMTSHYSYLLEFNYLINNHFERVKNPNLFKIDTLKSDSLNFPTVLSAY 767
N+ IQ S P+ ++ +HYS+ E +++NNHF++V+ PN FK D + FP +
Sbjct: 1205 NFDIQFFSFPRFALDTHYSFYQEAVFILNNHFDKVRYPNKFKYDLNVFNDTTFPIAFLSV 1264

Query: 768 LVDYLS-RCDIGEYEKFMDIKTREELLNILIFI---IYAEYCINMELDTDT---NLSLDR 926
L+D+LS R + YEKFM+I+TR++ L L+ I Y ++ ++D D S +
Sbjct: 1265 LIDFLSKRKNSNHYEKFMNIETRKDALIKLLRIQRDTYGASNVDDDMDADDINFETSFQK 1324

Query: 927 KKLLFPLIESKECQEIIQRAYDKFKIKNDETIISQTEQQIKDYSTQVDNMFTLGFINGDI 1106
+K ++ E Q +++ YD FKI+ D+ + +Y DN+F FI GDI
Sbjct: 1325 EKQCRAILIQPETQSLLKSIYDDFKIELDKKREKEKLTGEAEYLDSDDNLFLSAFIVGDI 1384

Query: 1107 IICQLILKHY--PNLFKITQYALAMAIKADRIHIIKFYYHNNNDNLI-MNLKDDQSLVDY 1277
+C L+L HY P FKIT+ A+ AIK +IHIIK+YY+ ++ NL+ N+K+D++L D+
Sbjct: 1385 KLCDLLLCHYYHPIQFKITKSAITKAIKDQKIHIIKYYYNGHHLNLLNNNIKNDKTLSDH 1444

Query: 1278 LKSELLNHQDYKFDINWL 1331
L ELLNH DYKFD+NWL
Sbjct: 1445 LLKELLNHNDYKFDLNWL 1462

Score = 134 bits (338), Expect = 6e-30
Identities = 82/207 (39%), Positives = 123/207 (59%), Gaps = 21/207 (10%)
Frame = +3

Query: 9 FDELYRLIEFIINKFLKT---------GSKRGRRS-------ESACEIMNYLYQMLLQRE 140
FD + + + I+NK+ T GS G S ES I+NY ++M++Q +
Sbjct: 854 FDFVMSIFKTIVNKWRCTVNNDHQKEGGSGSGGSSGTIKSLPESCIVILNYFFEMIIQTK 913

Query: 141 LVTPKQVIKVNQLLQSHSVPIKHSLFNAFYYLQIRSAKFTKYILSRPGFDSFFEINYEES 320
+T +QV +Q L +S+PIKHSLF+AFYYL+IRSAKF KYILSRPG ++FF++ +
Sbjct: 914 YITIEQVRMAHQFLCLNSIPIKHSLFHAFYYLKIRSAKFIKYILSRPGIETFFDVTMDSR 973

Query: 321 YSCSIDYSEGVNHLGQHGFDLAIYLDFDCFTFDYVLG---TNENGDYNT--PFDQVLYRL 485
Y+ + +Y + FD+ +L ++ FTFDYVLG ++ G +T FD++L L
Sbjct: 974 YNSTREY------FTERCFDIRDHLKYEMFTFDYVLGGESSSSGGASSTAASFDEILQNL 1027

Query: 486 VYQLSHSIINEIDIIDDFTSLSMNADL 566
QLS+ I + +I+ +F LS NADL
Sbjct: 1028 FDQLSNDICFKENIVHNFYQLSKNADL 1054

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,786,630,177
Number of extensions: 32566970
Number of successful extensions: 107617
Number of sequences better than 10.0: 52
Number of HSP's gapped: 103790
Number of HSP's successfully gapped: 63
Length of query: 473
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 341
Effective length of database: 623,955,076
Effective search space: 212768680916
Effective search space used: 212768680916
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.37 alm: 0.33 top: 0.53 tms: 0.00 mit: 0.14 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

60.0 %: cytoplasmic
28.0 %: nuclear
4.0 %: mitochondrial
4.0 %: vesicles of secretory system
4.0 %: endoplasmic reticulum

>> prediction for Contig-U00742-1 is cyt

VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0