Contig-U16225-1 |
Contig ID |
Contig-U16225-1 |
Contig update |
2004. 6.11 |
Contig sequence |
|
Gap |
gap included |
Contig length |
1735 |
Chromosome number (1..6, M) |
5 |
Chromosome length |
5062330 |
Start point |
616229 |
End point |
617853 |
Strand (PLUS/MINUS) |
PLUS |
Number of clones |
8 |
Number of EST |
11 |
Link to clone list |
U16225 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.23 |
Homology vs CSM-cDNA |
Query= Contig-U16225-1 (Contig-U16225-1Q) /CSM_Contig/Contig-U16225-1Q.Seq.d (1745 letters)
Database: CSM 8402 sequences; 8,075,542 total letters
Score E Sequences producing significant alignments: (bits) Value
Contig-U16225-1 (Contig-U16225-1Q) /CSM_Contig/Conti... 1705 0.0 Contig-U14894-1 (Contig-U14894-1Q) /CSM_Contig/Conti... 60 1e-08 Contig-U13860-1 (Contig-U13860-1Q) /CSM_Contig/Conti... 60 1e-08 Contig-U09161-1 (Contig-U09161-1Q) /CSM_Contig/Conti... 58 5e-08 Contig-U04168-1 (Contig-U04168-1Q) /CSM_Contig/Conti... 56 2e-07 Contig-U13053-1 (Contig-U13053-1Q) /CSM_Contig/Conti... 54 8e-07 Contig-U09724-1 (Contig-U09724-1Q) /CSM_Contig/Conti... 54 8e-07 Contig-U09397-1 (Contig-U09397-1Q) /CSM_Contig/Conti... 54 8e-07 Contig-U12496-1 (Contig-U12496-1Q) /CSM_Contig/Conti... 52 3e-06 Contig-U08747-1 (Contig-U08747-1Q) /CSM_Contig/Conti... 52 3e-06
>Contig-U16225-1 (Contig-U16225-1Q) /CSM_Contig/Contig-U16225-1Q.Seq.d Length = 1745
Score = 1705 bits (860), Expect = 0.0 Identities = 860/860 (100%) Strand = Plus / Plus
Query: 338 ggttacggaggcgatgatgatgtcacaaataattctgactatcaatcaactactagaaat 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 ggttacggaggcgatgatgatgtcacaaataattctgactatcaatcaactactagaaat 397
Query: 398 attcaacaaattcaaaatgctgtacaaatattaactaaattagttcaactattgggtaca 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 attcaacaaattcaaaatgctgtacaaatattaactaaattagttcaactattgggtaca 457
Query: 458 ccaaaagattcaatggatactagagaaaaaatccgtaattgtgttgattcaacaactcat 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 ccaaaagattcaatggatactagagaaaaaatccgtaattgtgttgattcaacaactcat 517
Query: 518 ttaatttcatcagaatctggcaaggttaaaaaccttacatctttagcaagtcgttcacgt 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 518 ttaatttcatcagaatctggcaaggttaaaaaccttacatctttagcaagtcgttcacgt 577
Query: 578 gattcaaaaaataaattattatatcaaaaattagttaaagaatttaataattgtttacaa 637 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 gattcaaaaaataaattattatatcaaaaattagttaaagaatttaataattgtttacaa 637
Query: 638 caatttaaagatattgcacaagttgcaactaaaaaagagaaaacaacaccattaccagtt 697 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 caatttaaagatattgcacaagttgcaactaaaaaagagaaaacaacaccattaccagtt 697
Query: 698 gcaccagatcatcaacaaccaacaacaacatttggaagaaacaacaacagcaataataat 757 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 gcaccagatcatcaacaaccaacaacaacatttggaagaaacaacaacagcaataataat 757
Query: 758 aatcaaaataatcactttttaaataatcaacaaccatattatgatgatgataatagagag 817 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 aatcaaaataatcactttttaaataatcaacaaccatattatgatgatgataatagagag 817
Query: 818 gacgaacatcaaagtttgatggaatcatcacgtagacaacaattggcacaaattgaggca 877 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 818 gacgaacatcaaagtttgatggaatcatcacgtagacaacaattggcacaaattgaggca 877
Query: 878 gaaagagaatatcaaaattcaatcattcaagaaagagatgaaggtattcgtaagattgaa 937 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 878 gaaagagaatatcaaaattcaatcattcaagaaagagatgaaggtattcgtaagattgaa 937
Query: 938 caatcgatcgttgagattaatgaaatctttgtagatttatcaggtttggttgcagagcaa 997 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 938 caatcgatcgttgagattaatgaaatctttgtagatttatcaggtttggttgcagagcaa 997
Query: 998 ggcgttatgattaataccattgaagctagtcttgaatcaactactatcaatacaaaagag 1057 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 998 ggcgttatgattaataccattgaagctagtcttgaatcaactactatcaatacaaaagag 1057
Query: 1058 ggtgtcaatcatcttagagaagcaagcaaaaatcaaaaatcctctagaaataaaatgtgt 1117 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1058 ggtgtcaatcatcttagagaagcaagcaaaaatcaaaaatcctctagaaataaaatgtgt 1117
Query: 1118 tggattgtactcattctcttaattgtttgtgctgttttaggtgttattttattctttact 1177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1118 tggattgtactcattctcttaattgtttgtgctgttttaggtgttattttattctttact 1177
Query: 1178 ttaagaaaatagagtaatca 1197 |||||||||||||||||||| Sbjct: 1178 ttaagaaaatagagtaatca 1197
Score = 210 bits (106), Expect = 5e-54 Identities = 146/166 (87%) Strand = Plus / Plus
Query: 18 caataaaagtagtagtaataataataataatagtaaaattgtatatnnnnnnnnnnncaa 77 |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 18 caataaaagtagtagtaataataataataatagtaaaattgtatataaaaaaaaaaacaa 77
Query: 78 cgtttagaattaaaatatagaataatttagnnnnnnnnntgtacaacaataataataatt 137 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 78 cgtttagaattaaaatatagaataatttagaaaaaaaaatgtacaacaataataataatt 137
Query: 138 ttggtggaggtggttataatcaaggtggaggatataacagtggtgg 183 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 ttggtggaggtggttataatcaaggtggaggatataacagtggtgg 183
Score = 54.0 bits (27), Expect = 8e-07 Identities = 27/27 (100%) Strand = Plus / Plus
Query: 1325 atagttttcttttcaaagatttaacag 1351 ||||||||||||||||||||||||||| Sbjct: 1325 atagttttcttttcaaagatttaacag 1351
Score = 44.1 bits (22), Expect = 7e-04 Identities = 22/22 (100%) Strand = Plus / Plus
Query: 1426 ttaatttcgaacatacaaaata 1447 |||||||||||||||||||||| Sbjct: 1426 ttaatttcgaacatacaaaata 1447
Score = 36.2 bits (18), Expect = 0.18 Identities = 18/18 (100%) Strand = Plus / Plus
Query: 34 aataataataataatagt 51 |||||||||||||||||| Sbjct: 308 aataataataataatagt 325
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 1248 taataataataataata 1264
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 232 taataataataataata 248
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 1233 taataataataataata 1249
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 1230 taataataataataata 1246
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 229 taataataataataata 245
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 1206 taataataataataata 1222
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 1224 taataataataataata 1240
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 1221 taataataataataata 1237
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 1215 taataataataataata 1231
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 1212 taataataataataata 1228
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 1236 taataataataataata 1252
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 1242 taataataataataata 1258
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 1245 taataataataataata 1261
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 1218 taataataataataata 1234
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 1227 taataataataataata 1243
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 1209 taataataataataata 1225
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 1251 taataataataataata 1267
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 1239 taataataataataata 1255
Score = 32.2 bits (16), Expect = 2.8 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 34 aataataataataata 49 |||||||||||||||| Sbjct: 1204 aataataataataata 1219
Score = 32.2 bits (16), Expect = 2.8 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 33 taataataataataat 48 |||||||||||||||| Sbjct: 1254 taataataataataat 1269
Score = 32.2 bits (16), Expect = 2.8 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 33 taataataataataat 48 |||||||||||||||| Sbjct: 235 taataataataataat 250
>Contig-U14894-1 (Contig-U14894-1Q) /CSM_Contig/Contig-U14894-1Q.Seq.d Length = 661
Score = 60.0 bits (30), Expect = 1e-08 Identities = 33/34 (97%) Strand = Plus / Plus
Query: 19 aataaaagtagtagtaataataataataatagta 52 |||||||| ||||||||||||||||||||||||| Sbjct: 99 aataaaagcagtagtaataataataataatagta 132
Score = 38.2 bits (19), Expect = 0.045 Identities = 25/27 (92%) Strand = Plus / Plus
Query: 25 agtagtagtaataataataataatagt 51 ||||||| |||||||||||||| |||| Sbjct: 108 agtagtaataataataataatagtagt 134
Score = 34.2 bits (17), Expect = 0.70 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 33 taataataataataata 49 ||||||||||||||||| Sbjct: 477 taataataataataata 493
>Contig-U13860-1 (Contig-U13860-1Q) /CSM_Contig/Contig-U13860-1Q.Seq.d Length = 1472
Score = 60.0 bits (30), Expect = 1e-08 Identities = 33/34 (97%) Strand = Plus / Plus
Query: 19 aataaaagtagtagtaataataataataatagta 52 |||||||| ||||||||||||||||||||||||| Sbjct: 130 aataaaagcagtagtaataataataataatagta 163
Score = 36.2 bits (18), Expect = 0.18 Identities = 18/18 (100%) Strand = Plus / Plus
Query: 32 gtaataataataataata 49 |||||||||||||||||| Sbjct: 1013 gtaataataataataata 1030
Score = 32.2 bits (16), Expect = 2.8 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 33 taataataataataat 48 |||||||||||||||| Sbjct: 1017 taataataataataat 1032
Database: CSM Posted date: Jun 21, 2004 1:35 PM Number of letters in database: 8,075,542 Number of sequences in database: 8402 Lambda K H 1.37 0.711 1.31
Gapped Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 95,560 Number of Sequences: 8402 Number of extensions: 95560 Number of successful extensions: 29159 Number of sequences better than 10.0: 2016 length of query: 1745 length of database: 8,075,542 effective HSP length: 16 effective length of query: 1729 effective length of database: 7,941,110 effective search space: 13730179190 effective search space used: 13730179190 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 16 (32.2 bits)
|
dna update |
2009. 3.22 |
Homology vs DNA |
Query= Contig-U16225-1 (Contig-U16225-1Q) /CSM_Contig/Contig-U16225-1Q.Seq.d (1745 letters)
Database: ddbj_B 98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(AU039372) Dictyostelium discoideum slug cDNA, clone SLH661. 837 0.0 2 (AU053379) Dictyostelium discoideum slug cDNA, clone SLI511. 797 0.0 2 (AU268006) Dictyostelium discoideum vegetative cDNA clone:VS... 656 0.0 2 (AU267969) Dictyostelium discoideum vegetative cDNA clone:VS... 519 e-174 2 (AU039886) Dictyostelium discoideum slug cDNA, clone SLG670. 583 e-167 2 (AU061931) Dictyostelium discoideum slug cDNA, clone SLG670. 486 e-165 4 (AU053328) Dictyostelium discoideum slug cDNA, clone SLI401. 430 e-130 4 (AU034195) Dictyostelium discoideum slug cDNA, clone SLC244. 432 e-122 2 (AU053111) Dictyostelium discoideum slug cDNA, clone SLF713. 357 2e-99 2 (AU061754) Dictyostelium discoideum slug cDNA, clone SLF713. 327 8e-85 1 (AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 36 0.006 10 (AU071469) Dictyostelium discoideum slug cDNA, clone SSB601. 46 0.034 2 (AL929252) Zebrafish DNA sequence from clone CH211-150G13 in... 46 0.037 5 (AL844507) Plasmodium falciparum chromosome 8. 38 0.041 2 (BX248234) Zebrafish DNA sequence from clone DKEY-13E15 in l... 36 0.045 2 (CR533571) Zebrafish DNA sequence from clone CH211-209O12 in... 36 0.045 2 (AR547680) Sequence 2811 from patent US 6747137. 42 0.071 2 (EY332208) CAWY4712.rev CAWY Helobdella robusta Subtracted E... 34 0.087 3 (DX979171) SBA006_B16.r Sugar beet BAC library USH20 (Code S... 34 0.11 3 (EY327713) CAWY12804.rev CAWY Helobdella robusta Subtracted ... 34 0.11 3 (EY327714) CAWY12804.fwd CAWY Helobdella robusta Subtracted ... 34 0.12 3 (BX072561) Zebrafish DNA sequence from clone CH211-157C18 in... 38 0.17 2 (AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 36 0.28 10 (FC745055) CBBI14681.rev CBBI Lottia gigantea 26h,37h,61h La... 50 0.28 1 (FC695849) CAXX5205.rev CAXX Lottia gigantea from male gonad... 50 0.28 1 (FC577157) CAXP12694.rev CAXP Lottia gigantea from head, foo... 50 0.28 1 (BM273853) PfESToaa60d11.y1 Plasmodium falciparum 3D7 gameto... 34 0.32 3 (EY300736) CAWX15184.fwd CAWX Helobdella robusta Primary Ear... 34 0.35 3 (EL494968) D10_PFBAMHI-S-T7-PLATE2A.AB1 Blood stage Plasmodi... 40 0.49 2 (AU033965) Dictyostelium discoideum slug cDNA, clone SLB668. 38 0.56 2 (AC007535) Homo sapiens 12p13 BAC RPCI11-154I21 (Roswell Par... 46 0.56 4 (CT025546) Zebrafish DNA sequence from clone DKEY-105J11 in ... 34 0.61 2 (AC174092) Strongylocentrotus purpuratus clone R3-5F16, WORK... 34 0.62 2 (AC184544) Strongylocentrotus purpuratus clone R3-10M4, WORK... 36 0.62 2 (X17489) Plasmodium falciparum mRNA for asparagine-rich anti... 40 0.70 2 (AL740592) Danio rerio genomic clone DKEY-5G19, genomic surv... 34 0.83 3 (EL508692) F06_PF-SAU3A-T3-M-P23_D.AB1 Blood stage Plasmodiu... 34 1.0 3 (EL508691) F06_PF-SAU3A-T3-M-P23.AB1 Blood stage Plasmodium ... 34 1.0 3 (CT009737) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 42 1.1 8 (AC159297) Mus musculus BAC clone RP23-258F9 from chromosome... 48 1.1 1 (AC131774) Mus musculus BAC clone RP24-311P6 from 12, comple... 48 1.1 1 (AC129369) Rattus norvegicus clone CH230-126A1, *** SEQUENCI... 48 1.1 1 (AC128247) Rattus norvegicus clone CH230-523D17, WORKING DRA... 48 1.1 1 (EK471788) 1095469457379 Global-Ocean-Sampling_GS-32-01-01-1... 48 1.1 1 (EK470100) 1095469446915 Global-Ocean-Sampling_GS-32-01-01-1... 48 1.1 1 (EK239652) 1095460216725 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.1 1 (CR200805) Forward strand read from insert in 5'HPRT inserti... 48 1.1 1 (BX967549) Forward strand read from insert in 5'HPRT inserti... 48 1.1 1 (FE163626) LV_LO_RA034C07f Litopenaeus vannamei lymphoid org... 34 1.2 3 (EY392514) CAXA9849.fwd CAXA Helobdella robusta Subtracted L... 36 1.2 3 (BQ633487) PfESToab42e08.y1 Plasmodium falciparum 3D7 asexua... 40 1.2 2 (C24619) Dictyostelium discoideum slug cDNA, clone SL-X014. 42 1.2 2 (EY332446) CAWY4862.fwd CAWY Helobdella robusta Subtracted E... 34 1.4 3 (EY330071) CAWY3195.fwd CAWY Helobdella robusta Subtracted E... 30 1.5 4 (BJ441802) Dictyostelium discoideum cDNA clone:ddv47m22, 3' ... 38 1.6 2 (CR450697) Zebrafish DNA sequence from clone CH211-284F22 in... 42 1.6 7 (EY381463) CAXA3478.fwd CAXA Helobdella robusta Subtracted L... 36 1.8 3 (DY885823) CeleSEQ1273 Cunninghamella elegans pBluescript (E... 38 1.9 2 (CR376768) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 36 2.1 6 (EL498123) PFLAB1-M-P1A_B08_04.AB1 Blood stage Plasmodium fa... 36 2.1 3 (EY336673) CAWY784.fwd CAWY Helobdella robusta Subtracted Ea... 30 2.1 4 (AL035476) Plasmodium falciparum MAL4P3. 36 2.1 2 (AC111908) Rattus norvegicus clone CH230-112H17, *** SEQUENC... 34 2.2 2 (CU457779) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 2.2 2 (AL034559) Plasmodium falciparum MAL3P7. 34 2.2 2 (AC180125) Strongylocentrotus purpuratus clone R3-4005M21, W... 34 2.2 2 (CU062484) Zebrafish DNA sequence from clone CH73-329L6 in l... 42 2.2 4 (BX248115) Zebrafish DNA sequence from clone CH211-208K15 in... 34 2.2 2 (CU855620) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 34 2.2 2 (CR753870) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 2.2 2 (CR759797) Zebrafish DNA sequence from clone DKEY-87K14 in l... 34 2.2 2 (BX936425) Zebrafish DNA sequence from clone CH211-39L24 in ... 34 2.2 2 (AL929558) Zebrafish DNA sequence from clone CH211-159N7. 34 2.2 2 (AC146480) Danio rerio clone CH211-40O9, complete sequence. 34 2.2 2 (CR847851) Zebrafish DNA sequence from clone DKEYP-115D7 in ... 34 2.2 2 (AC178609) Strongylocentrotus purpuratus clone R3-3018N20, W... 36 2.2 2 (CR847968) Zebrafish DNA sequence from clone CH211-203D7 in ... 34 2.2 2 (CR388411) Zebrafish DNA sequence from clone CH211-158E11 in... 34 2.3 2 (CU467042) Zebrafish DNA sequence from clone CH73-49C19 in l... 34 2.3 2 (CT027747) Zebrafish DNA sequence from clone CH211-165F6 in ... 34 2.3 2 (AB075928) Danio rerio CNR family (zCNRv1, zCNRv2, zCNRv3, z... 34 2.3 2 (BX890614) Zebrafish DNA sequence from clone DKEY-46N5 in li... 34 2.3 2 (AC168584) Strongylocentrotus purpuratus clone R3-3065G1, WO... 36 2.3 2 (CU929373) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 2.3 2 (CU151894) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 34 2.3 2 (CU104755) Zebrafish DNA sequence from clone CH73-95H12 in l... 34 2.3 2 (AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 34 2.4 2 (CU499339) Zebrafish DNA sequence from clone CH1073-98B19 in... 34 2.4 2 (BX957360) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 34 2.5 2 (AJ416696) Plasmodium falciparum mRNA for putative cyclin 2 ... 42 2.5 2 (CR749749) Zebrafish DNA sequence from clone CH211-153P17 in... 42 2.7 5 (EB226683) PEG002-C-109907-501 Normalized Pedal-Pleural Gang... 36 2.8 2 (FF071521) G1045P325FL13.T0 Aplysia californica Pooled Norma... 34 2.9 3 (EY310369) CAWX22110.rev CAWX Helobdella robusta Primary Ear... 34 3.0 2 (FE098635) LV_HC_RA016N13r Litopenaeus vannamei hemocyte cDN... 34 3.0 2 (AU037746) Dictyostelium discoideum slug cDNA, clone SSE245. 40 3.0 2 (CR848687) Zebrafish DNA sequence from clone DKEY-46H11 in l... 40 3.0 6 (FE098636) LV_HC_RA016P13r Litopenaeus vannamei hemocyte cDN... 34 3.0 2 (BQ596747) PfESToab22a08.y1 Plasmodium falciparum 3D7 asexua... 34 3.0 2 (BU494801) PfESToab67h08.y1 Plasmodium falciparum 3D7 asexua... 34 3.0 2 (CK241396) rx29a05.y1 Meloidogyne paranaensis egg SL1 pGEM M... 34 3.0 2 (CK241444) rx29f04.y1 Meloidogyne paranaensis egg SL1 pGEM M... 34 3.0 2 (BU497200) PfESToab56c02.y1 Plasmodium falciparum 3D7 asexua... 34 3.0 2 (ET996192) CHO_OF919xd16f1.ab1 CHO_OF Nicotiana tabacum geno... 34 3.0 2 (CK241380) rx28g09.y1 Meloidogyne paranaensis egg SL1 pGEM M... 34 3.0 2 (EL501821) 092_PFLAB1-S-PLATE12B.AB1 Blood stage Plasmodium ... 34 3.0 2 (FE758853) CAYF6530.g1 CAYF Petrolisthes cinctipes heart, wh... 34 3.0 2 (FE758852) CAYF6530.b1 CAYF Petrolisthes cinctipes heart, wh... 34 3.0 2 (FP085414) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 3.4 6 (EY336933) CAWY8011.rev CAWY Helobdella robusta Subtracted E... 34 3.6 3 (EY332279) CAWY4754.rev CAWY Helobdella robusta Subtracted E... 34 3.9 3 (BX537162) Zebrafish DNA sequence from clone DKEY-9A20 in li... 36 4.0 7 (AZ930701) 474.dhz57f07.s1 Saccharomyces unisporus NRRL Y-15... 40 4.0 2 (CX590821) TTE00029774 Amplicon Express - Conjugative Form T... 44 4.0 2 (BH176414) 006_F_19-rev SmBAC1 Schistosoma mansoni genomic c... 32 4.0 3 (AL613373) T3 end of clone 006CC10 of library SmBAC1 from st... 32 4.0 3 (EY370567) CAXA12983.fwd CAXA Helobdella robusta Subtracted ... 34 4.3 3 (CR936322) Zebrafish DNA sequence from clone DKEY-91I17 in l... 46 4.4 1 (CR751235) Zebrafish DNA sequence from clone CH211-240J22 in... 46 4.4 1 (CR391978) Zebrafish DNA sequence from clone DKEY-252L8 in l... 46 4.4 1 (BV437687) S237P632RC5.T0 PortugueseWaterDog Canis familiari... 46 4.4 1 (AM449625) Vitis vinifera contig VV78X260785.8, whole genome... 46 4.4 1 (AY285275) Sus scrofa clone UMNp1135.gcg microsatellite sequ... 46 4.4 1 (AF482380) Dictyostelium discoideum ABC transporter AbcG1 (a... 46 4.4 1 (AF479256) Dictyostelium discoideum non-transporter ABC prot... 46 4.4 1 (AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 46 4.4 1 (AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 46 4.4 1 (AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 46 4.4 1 (AC114261) Dictyostelium discoideum chromosome 2 map 126059-... 46 4.4 1 (AC022534) Homo sapiens chromosome 10 clone RP11-316G7, comp... 46 4.4 1 (CU693411) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 4.4 1 (CU467878) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 4.4 1 (AC233188) Lama pacos clone CH246-474C1, WORKING DRAFT SEQUE... 46 4.4 1 (AC231204) Lama pacos clone CH246-260A19, WORKING DRAFT SEQU... 46 4.4 1 (AC225660) Gorilla gorilla gorilla clone CH255-468O9, WORKIN... 46 4.4 1 (AC185163) Ornithorhynchus anatinus clone OA_Bb-293C8, WORKI... 46 4.4 1 (BH369425) AG-ND-125C24.TR ND-TAM Anopheles gambiae genomic ... 46 4.4 1 (AQ429216) CITBI-E1-2565E9.TF CITBI-E1 Homo sapiens genomic ... 46 4.4 1 (FI284193) AdH1028-CPY2-E17TR AdH1 Arachis duranensis genomi... 46 4.4 1 (ET040442) MUGQ_CH252P346K24Sp6_CP645_086 CHORI-252 Vervet M... 46 4.4 1 (EI398569) MUGQ_CH252P214C06Sp6_CN343_029 CHORI-252 Vervet M... 46 4.4 1 (AL141325) Anopheles gambiae GSS T7 end of clone 03J10 of No... 46 4.4 1 (DU094471) 109360 Tomato HindIII BAC Library Solanum lycoper... 46 4.4 1 (DU046520) 159002 Tomato HindIII BAC Library Solanum lycoper... 46 4.4 1 (CE760888) tigr-gss-dog-17000370017944 Dog Library Canis lup... 46 4.4 1 (BX242215) Danio rerio genomic clone DKEY-279B18, genomic su... 46 4.4 1 (EH293049) Q3_Reed_18d_tembryo_04_J07_106.F 14d_emb Meleagri... 46 4.4 1 (AU271101) Dictyostelium discoideum vegetative cDNA clone:VS... 46 4.4 1 (BJ396678) Dictyostelium discoideum cDNA clone:dds43e15, 5' ... 46 4.4 1 (BJ368864) Dictyostelium discoideum cDNA clone:ddc48j07, 5' ... 46 4.4 1 (BJ367509) Dictyostelium discoideum cDNA clone:ddc43a01, 5' ... 46 4.4 1 (BJ364279) Dictyostelium discoideum cDNA clone:ddc31k04, 5' ... 46 4.4 1 (BJ339335) Dictyostelium discoideum cDNA clone:dda64p23, 5' ... 46 4.4 1 (BJ338996) Dictyostelium discoideum cDNA clone:dda63c19, 5' ... 46 4.4 1 (BJ337988) Dictyostelium discoideum cDNA clone:dda59n13, 5' ... 46 4.4 1 (BJ336608) Dictyostelium discoideum cDNA clone:dda54b17, 5' ... 46 4.4 1 (BJ336262) Dictyostelium discoideum cDNA clone:dda53e10, 5' ... 46 4.4 1 (BJ336015) Dictyostelium discoideum cDNA clone:dda52m11, 5' ... 46 4.4 1 (BJ333701) Dictyostelium discoideum cDNA clone:dda43o17, 5' ... 46 4.4 1 (BJ330754) Dictyostelium discoideum cDNA clone:dda32k16, 5' ... 46 4.4 1 (BJ330608) Dictyostelium discoideum cDNA clone:dda32k06, 5' ... 46 4.4 1 (BJ328154) Dictyostelium discoideum cDNA clone:dda23k05, 5' ... 46 4.4 1 (BG522357) 20-54 Stevia field grown leaf cDNA Stevia rebaudi... 46 4.4 1 (DQ397833) Cenarchaeum symbiosum B clone C02E10, complete se... 46 4.4 1 (DQ397831) Cenarchaeum symbiosum B clone C02C04, complete se... 46 4.4 1 (BX231032) Danio rerio genomic clone DKEY-254O18, genomic su... 34 4.5 3 (AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s... 36 4.5 9 (BJ362069) Dictyostelium discoideum cDNA clone:ddc20b04, 5' ... 34 4.6 3 (AM433107) Vitis vinifera contig VV78X166930.4, whole genome... 34 4.7 5 (AC115594) Dictyostelium discoideum chromosome 2 map 4071862... 44 4.7 3 (AY220914) Dictyostelium discoideum ComB (comB) gene, comple... 34 4.8 3 (BJ440993) Dictyostelium discoideum cDNA clone:ddv45i07, 3' ... 42 4.8 2 (AU076388) Dictyostelium discoideum slug cDNA, clone SSA693. 34 4.9 2 (DC208340) Plasmodium berghei strain ANKA cDNA clone:MG00859... 36 5.1 2 (BJ344192) Dictyostelium discoideum cDNA clone:dda18p17, 3' ... 42 5.1 2 (AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 40 5.2 8 (AM054861) Isotricha prostoma EST, clone Iso_E08. 42 5.5 2 (CV713496) UCRCS08_0002O08_r Parent Washington Navel Orange ... 44 5.9 2 (EK562092) 1095521011629 Global-Ocean-Sampling_GS-32-01-01-1... 42 6.1 2 (EY031756) JGI_CAWS1900.fwd CAWS Acropora palmata adult colo... 38 6.1 2 (EY031755) JGI_CAWS1900.rev CAWS Acropora palmata adult colo... 38 6.1 2 (AY428796) Dictyostelium discoideum DIF insensitive mutant A... 36 6.2 3 (CX589668) TTE00020515 Amplicon Express - Conjugative Form T... 44 6.4 2 (EY336814) CAWY7923.fwd CAWY Helobdella robusta Subtracted E... 36 6.5 2 (AM473925) Vitis vinifera, whole genome shotgun sequence, co... 32 6.5 6 (G38883) TA43 Plasmodium falciparum haploid Plasmodium falci... 34 6.6 2 (CR855388) Zebrafish DNA sequence from clone DKEY-38O15. 42 6.6 6 (AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4... 34 6.8 8 (CW947808) TcB31.1_G11_SP6 Tribolium BAC library Tribolium c... 36 6.9 2 (EY325352) CAWY10877.fwd CAWY Helobdella robusta Subtracted ... 38 7.0 2 (AL844506) Plasmodium falciparum chromosome 7. 32 7.0 2 (AM039964) Equus caballus genomic BAC clone CH241-245H5, con... 42 7.1 8 (CZ993390) 180467 Tomato MboI BAC Library Solanum lycopersic... 36 7.2 2 (AQ417700) RPCI-11-197M10.TJ RPCI-11 Homo sapiens genomic cl... 34 7.2 3 (AC173975) Strongylocentrotus purpuratus clone R3-1113K17, W... 38 7.2 7 (CT027709) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 7.6 2 (CJ740550) Ipomoea nil cDNA clone:jmsf1c08, 5' end. 42 7.6 2 (AC090189) Homo sapiens chromosome 8 clone RP11-410N18 map 8... 40 7.8 5 (BV724507) 00.204303.033H03 Xenopus tropicalis (Nigerian str... 34 7.8 2 (AE014845) Plasmodium falciparum 3D7 chromosome 12, section ... 34 7.9 2 (AC129673) Rattus norvegicus clone CH230-324G24, WORKING DRA... 34 7.9 2 (AC180660) Strongylocentrotus purpuratus clone R3-3089G24, W... 32 7.9 2 (CR769785) Zebrafish DNA sequence from clone DKEY-1N3 in lin... 32 7.9 2 (AL672178) Mouse DNA sequence from clone RP23-328O2 on chrom... 36 8.0 3 (FP017299) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 32 8.0 2 (AC181777) Strongylocentrotus purpuratus clone R3-1033B12, W... 34 8.0 2 (AC180145) Strongylocentrotus purpuratus clone R3-4004A12, W... 34 8.0 2 (FP017277) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 32 8.0 2 (BX465205) Zebrafish DNA sequence from clone CH211-197E7 in ... 34 8.0 2 (CR847804) Zebrafish DNA sequence from clone DKEY-85C24 in l... 32 8.1 2 (CT737136) Zebrafish DNA sequence from clone DKEYP-12B1 in l... 34 8.1 2 (AC168495) Strongylocentrotus purpuratus clone R3-3117E17, W... 32 8.1 2 (AC175887) Strongylocentrotus purpuratus clone R3-15B18, WOR... 34 8.1 2 (AC184465) Strongylocentrotus purpuratus clone R3-3036K16, W... 34 8.1 2 (AC005308) Plasmodium falciparum chromosome 12 clone PFYAC49... 34 8.1 2 (CR759867) Zebrafish DNA sequence from clone CH211-233F16 in... 32 8.1 2 (AC168481) Strongylocentrotus purpuratus clone R3-3117L22, W... 34 8.1 2 (CT573141) Zebrafish DNA sequence from clone CH211-203L24 in... 32 8.1 2 (CR407561) Zebrafish DNA sequence from clone CH211-244L7 in ... 34 8.1 2 (CU896665) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 8.1 2 (CR854915) Zebrafish DNA sequence from clone DKEY-4G13 in li... 34 8.1 2 (AC184463) Strongylocentrotus purpuratus clone R3-3040L8, WO... 34 8.1 2 (AC181213) Strongylocentrotus purpuratus clone R3-115N19, WO... 34 8.1 2 (AC201462) Strongylocentrotus purpuratus clone R3-3040O16, W... 34 8.2 2 (CR391989) Zebrafish DNA sequence from clone DKEY-263H23 in ... 34 8.2 2 (AC168489) Strongylocentrotus purpuratus clone R3-3117I12, W... 34 8.2 2 (CR788289) Zebrafish DNA sequence from clone DKEY-176H21. 34 8.2 2 (AC178697) Strongylocentrotus purpuratus clone R3-12H19, WOR... 34 8.2 2 (BX546460) Zebrafish DNA sequence from clone RP71-84C10. 32 8.2 2 (CT573442) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 32 8.2 2 (CR762395) Zebrafish DNA sequence from clone CH211-170P16 in... 34 8.2 2 (AF010541) Plasmodium falciparum microsatellite 4 sequence. 34 8.3 2 (AC180689) Strongylocentrotus purpuratus clone R3-3086D23, W... 32 8.3 2 (CU179730) Zebrafish DNA sequence from clone CH211-186I18 in... 34 8.3 2 (CU856173) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 8.3 2 (CR388075) Zebrafish DNA sequence from clone DKEY-223L3 in l... 34 8.3 2 (CR936261) Zebrafish DNA sequence from clone DKEY-207A6 in l... 34 8.4 2 (AC118072) Rattus norvegicus clone CH230-350A21, *** SEQUENC... 34 8.4 2 (CR932377) Zebrafish DNA sequence from clone DKEY-238H15 in ... 34 8.4 2 (AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 32 8.5 2 (CU855910) Zebrafish DNA sequence from clone CH1073-177K7 in... 36 8.5 3 (CT030232) Zebrafish DNA sequence from clone DKEY-90F9 in li... 32 8.6 2 (CT009673) Zebrafish DNA sequence from clone CH73-334L20 in ... 32 8.7 2 (CU633613) Zebrafish DNA sequence from clone ZFOS-2548D7 in ... 32 8.9 2 (AC208086) Populus trichocarpa clone JGIACSB05-D10, complete... 32 8.9 2 (AU267761) Dictyostelium discoideum vegetative cDNA clone:VS... 34 9.4 3 (AM431945) Vitis vinifera contig VV78X031359.3, whole genome... 34 9.5 2 (CU928137) Zebrafish DNA sequence from clone CH1073-517O12 i... 40 9.9 3 (AZ078546) RPCI-23-398O18.TJB RPCI-23 Mus musculus genomic c... 34 10.0 3
>(AU039372) Dictyostelium discoideum slug cDNA, clone SLH661. Length = 576
Score = 837 bits (422), Expect(2) = 0.0 Identities = 422/422 (100%) Strand = Plus / Plus
Query: 776 ttaaataatcaacaaccatattatgatgatgataatagagaggacgaacatcaaagtttg 835 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaataatcaacaaccatattatgatgatgataatagagaggacgaacatcaaagtttg 60
Query: 836 atggaatcatcacgtagacaacaattggcacaaattgaggcagaaagagaatatcaaaat 895 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atggaatcatcacgtagacaacaattggcacaaattgaggcagaaagagaatatcaaaat 120
Query: 896 tcaatcattcaagaaagagatgaaggtattcgtaagattgaacaatcgatcgttgagatt 955 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tcaatcattcaagaaagagatgaaggtattcgtaagattgaacaatcgatcgttgagatt 180
Query: 956 aatgaaatctttgtagatttatcaggtttggttgcagagcaaggcgttatgattaatacc 1015 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aatgaaatctttgtagatttatcaggtttggttgcagagcaaggcgttatgattaatacc 240
Query: 1016 attgaagctagtcttgaatcaactactatcaatacaaaagagggtgtcaatcatcttaga 1075 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 attgaagctagtcttgaatcaactactatcaatacaaaagagggtgtcaatcatcttaga 300
Query: 1076 gaagcaagcaaaaatcaaaaatcctctagaaataaaatgtgttggattgtactcattctc 1135 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gaagcaagcaaaaatcaaaaatcctctagaaataaaatgtgttggattgtactcattctc 360
Query: 1136 ttaattgtttgtgctgttttaggtgttattttattctttactttaagaaaatagagtaat 1195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ttaattgtttgtgctgttttaggtgttattttattctttactttaagaaaatagagtaat 420
Query: 1196 ca 1197 || Sbjct: 421 ca 422
Score = 46.1 bits (23), Expect(2) = 0.0 Identities = 23/23 (100%) Strand = Plus / Plus
Query: 1329 ttttcttttcaaagatttaacag 1351 ||||||||||||||||||||||| Sbjct: 554 ttttcttttcaaagatttaacag 576
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 98226423 Number of Hits to DB: 1,171,863,449 Number of extensions: 84745182 Number of successful extensions: 8445887 Number of sequences better than 10.0: 250 Length of query: 1745 Length of database: 98,766,808,389 Length adjustment: 24 Effective length of query: 1721 Effective length of database: 96,409,374,237 Effective search space: 165920533061877 Effective search space used: 165920533061877 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 7.27 |
Homology vs Protein |
Query= Contig-U16225-1 (Contig-U16225-1Q) /CSM_Contig/Contig-U16225-1Q.Seq.d (1745 letters)
Database: nrp_A 3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
EF085435_1(EF085435|pid:none) Picea sitchensis clone WS0299_A10 ... 126 2e-27 D71447(D71447)probable syntaxin - Arabidopsis thaliana 118 8e-25 AF532627_1(AF532627|pid:none) Glycine max syntaxin mRNA, complet... 118 8e-25 DQ200364_1(DQ200364|pid:none) Solanum tuberosum clone 054F04 syn... 117 2e-24 AC150505_6(AC150505|pid:none) Medicago truncatula clone mth2-99l... 115 5e-24 EU955959_1(EU955959|pid:none) Zea mays clone 1554291 syntaxin 23... 114 1e-23 AC183498_44(AC183498|pid:none) Brassica oleracea, *** SEQUENCING... 113 2e-23 AC183492_8(AC183492|pid:none) Brassica oleracea Contig G, comple... 113 2e-23 AB295619_1(AB295619|pid:none) Nicotiana tabacum NtSYP22 mRNA for... 110 1e-22 AK071767_1(AK071767|pid:none) Oryza sativa Japonica Group cDNA c... 107 1e-21 AY088599_1(AY088599|pid:none) Arabidopsis thaliana clone 8257 mR... 105 7e-21 (Q39233) RecName: Full=Syntaxin-21; Short=AtSYP21; AltN... 105 7e-21 BT046540_1(BT046540|pid:none) Salmo salar clone ssal-sjb-002-083... 104 9e-21 AK170203_1(AK170203|pid:none) Mus musculus NOD-derived CD11c +ve... 103 2e-20 BT074137_1(BT074137|pid:none) Oncorhynchus mykiss clone omyk-evo... 103 2e-20 CR954212_112(CR954212|pid:none) Ostreococcus tauri strain OTTH05... 101 8e-20 AK167804_1(AK167804|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 101 1e-19 BC010669_1(BC010669|pid:none) Mus musculus syntaxin 12, mRNA (cD... 101 1e-19 BC046851_1(BC046851|pid:none) Xenopus laevis similar to syntaxin... 99 4e-19 BC067326_1(BC067326|pid:none) Xenopus tropicalis syntaxin 12, mR... 99 5e-19 AF044581_1(AF044581|pid:none) Rattus norvegicus syntaxin 13 mRNA... 99 6e-19 AJ719342_1(AJ719342|pid:none) Gallus gallus mRNA for hypothetica... 97 1e-18 BT081794_1(BT081794|pid:none) Rana catesbeiana clone rcat-evr-52... 97 1e-18 BC151253_1(BC151253|pid:none) Bos taurus syntaxin 12, mRNA (cDNA... 97 2e-18 AF035632_1(AF035632|pid:none) Rattus norvegicus syntaxin 12 mRNA... 97 2e-18 AL035306_1(AL035306|pid:none) H.sapiens gene from PAC 426I6, sim... 95 9e-18 AB019212_1(AB019212|pid:none) Mus musculus mRNA for syntaxin 7, ... 94 2e-17 BX530067_4(BX530067|pid:none) Zebrafish DNA sequence from clone ... 93 3e-17 BC071327_1(BC071327|pid:none) Danio rerio syntaxin 12, mRNA (cDN... 93 3e-17 AB084949_1(AB084949|pid:none) Mus musculus Stx-7 gene for syntax... 92 5e-17 (Q3ZBT5) RecName: Full=Syntaxin-7; &BC103116_1(BC103116|pid:none) 92 8e-17 (Q5RBW6) RecName: Full=Syntaxin-12; &CR858517_1(CR858517|pid:no... 92 8e-17 (O70439) RecName: Full=Syntaxin-7; &AF056323_1(AF056323|pid:none) 91 1e-16 (Q5R602) RecName: Full=Syntaxin-7; &CR860698_1(CR860698|pid:none) 91 1e-16 (O15400) RecName: Full=Syntaxin-7; &AL357034_4(AL357034|pid:non... 91 1e-16 AB232045_1(AB232045|pid:none) Aspergillus oryzae Aovam3 gene for... 91 1e-16 BT057105_1(BT057105|pid:none) Salmo salar clone ssal-rgb2-618-24... 91 2e-16 (O70257) RecName: Full=Syntaxin-7; &BC085737_1(BC085737|pid:none) 91 2e-16 AB173984_1(AB173984|pid:none) Macaca fascicularis brain cDNA clo... 90 2e-16 AK002867_1(AK002867|pid:none) Mus musculus adult male kidney cDN... 90 2e-16 CT476803_5(CT476803|pid:none) Zebrafish DNA sequence from clone ... 90 3e-16 CU638743_777(CU638743|pid:none) Podospora anserina genomic DNA c... 90 3e-16 AL929507_1(AL929507|pid:none) Zebrafish DNA sequence from clone ... 90 3e-16 AE014296_3743(AE014296|pid:none) Drosophila melanogaster chromos... 89 4e-16 AF031430_1(AF031430|pid:none) Rattus norvegicus syntaxin 7 mRNA,... 88 9e-16 AE017342_151(AE017342|pid:none) Cryptococcus neoformans var. neo... 87 1e-15 AM920437_1830(AM920437|pid:none) Penicillium chrysogenum Wiscons... 86 4e-15 BT036829_1(BT036829|pid:none) Zea mays full-length cDNA clone ZM... 85 1e-14 AL357034_5(AL357034|pid:none) Human DNA sequence from clone RP11... 85 1e-14 CR382138_500(CR382138|pid:none) Debaryomyces hansenii strain CBS... 84 2e-14 AK299982_1(AK299982|pid:none) Homo sapiens cDNA FLJ54877 complet... 84 2e-14 BT067988_1(BT067988|pid:none) Zea mays full-length cDNA clone ZM... 83 4e-14 BT076775_1(BT076775|pid:none) Caligus rogercresseyi clone crog-e... 82 5e-14 AE014296_2378(AE014296|pid:none) Drosophila melanogaster chromos... 81 1e-13 CR382125_947(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 78 1e-12 AK055726_1(AK055726|pid:none) Homo sapiens cDNA FLJ31164 fis, cl... 76 3e-12 CU928170_697(CU928170|pid:none) Kluyveromyces thermotolerans str... 76 4e-12 BC065226_1(BC065226|pid:none) Homo sapiens t-SNARE domain contai... 75 1e-11 BC126343_1(BC126343|pid:none) Homo sapiens t-SNARE domain contai... 74 2e-11 BC143686_1(BC143686|pid:none) Homo sapiens t-SNARE domain contai... 74 2e-11 BT076720_1(BT076720|pid:none) Caligus rogercresseyi clone crog-e... 73 3e-11 BT077157_1(BT077157|pid:none) Caligus rogercresseyi clone crog-e... 73 3e-11 AK073327_1(AK073327|pid:none) Oryza sativa Japonica Group cDNA c... 72 5e-11 FN392320_955(FN392320|pid:none) Pichia pastoris GS115 chromosome... 71 1e-10 M90395_1(M90395|pid:none) Saccharomyces cerevisiae Pep12p gene (... 70 2e-10 EU963088_1(EU963088|pid:none) Zea mays clone 257391 syntaxin 132... 70 2e-10 FM992689_883(FM992689|pid:none) Candida dubliniensis CD36 chromo... 70 2e-10 AP008212_657(AP008212|pid:none) Oryza sativa (japonica cultivar-... 70 3e-10 CR382129_837(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 70 3e-10 AY874422_1(AY874422|pid:none) Pichia angusta Vam3p (VAM3) gene, ... 69 4e-10 AM502247_7(AM502247|pid:none) Leishmania infantum chromosome 29. 69 5e-10 BT059629_1(BT059629|pid:none) Salmo salar clone ssal-rgf-501-177... 69 7e-10 CR380955_37(CR380955|pid:none) Candida glabrata strain CBS138 ch... 68 1e-09 AB172749_1(AB172749|pid:none) Macaca fascicularis brain cDNA clo... 67 2e-09 BC059338_1(BC059338|pid:none) Xenopus laevis hypothetical protei... 67 2e-09 CP000080_7(CP000080|pid:none) Leishmania major strain Friedlin c... 67 2e-09 AK294911_1(AK294911|pid:none) Homo sapiens cDNA FLJ53760 complet... 66 5e-09 BT080503_1(BT080503|pid:none) Caligus clemensi clone ccle-evs-51... 66 5e-09 AE014298_3134(AE014298|pid:none) Drosophila melanogaster chromos... 65 8e-09 AB060856_1(AB060856|pid:none) Macaca fascicularis brain cDNA clo... 65 8e-09 CR382128_411(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 65 8e-09 BT003305_1(BT003305|pid:none) Drosophila melanogaster GH10149 fu... 65 8e-09 AF188892_2(AF188892|pid:none) Drosophila melanogaster strain Ore... 65 8e-09 AC114263_47(AC114263|pid:none) Dictyostelium discoideum chromoso... 64 2e-08 CP000499_328(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 64 2e-08 AC093543_48(AC093543|pid:none) Trypanosoma brucei chromosome 3 c... 64 2e-08 CR857623_1(CR857623|pid:none) Pongo abelii mRNA; cDNA DKFZp459J1... 64 2e-08 AL050327_2(AL050327|pid:none) Human DNA sequence from clone RP5-... 64 2e-08 AK296282_1(AK296282|pid:none) Homo sapiens cDNA FLJ57384 complet... 64 2e-08 AL050327_4(AL050327|pid:none) Human DNA sequence from clone RP5-... 64 2e-08 AL050327_3(AL050327|pid:none) Human DNA sequence from clone RP5-... 64 2e-08 (Q9H0Z0) RecName: Full=Syntaxin-16; Short=Syn16; &AL05... 64 2e-08 AL139349_5(AL139349|pid:none) Human DNA sequence from clone RP11... 64 2e-08 BC168980_1(BC168980|pid:none) Rattus norvegicus syntaxin 16, mRN... 64 2e-08 CR382130_1038(CR382130|pid:none) Yarrowia lipolytica strain CLIB... 63 3e-08 FN392319_212(FN392319|pid:none) Pichia pastoris GS115 chromosome... 63 3e-08 CR954217_9(CR954217|pid:none) Ostreococcus tauri strain OTTH0595... 63 4e-08 CR956405_4(CR956405|pid:none) Pig DNA sequence from clone CH242-... 63 4e-08 AL669896_2(AL669896|pid:none) Mouse DNA sequence from clone RP23... 63 4e-08 (O94651) RecName: Full=Syntaxin pep12; &AL049190_4(AL049190|pid... 63 4e-08 AK029571_1(AK029571|pid:none) Mus musculus adult male testis cDN... 63 4e-08 (Q9SRV7) RecName: Full=Putative syntaxin-131; Short=AtS... 63 4e-08 CR956405_2(CR956405|pid:none) Pig DNA sequence from clone CH242-... 63 4e-08 AF008935_1(AF008935|pid:none) Homo sapiens syntaxin-16A mRNA, co... 62 5e-08 DQ652907_1(DQ652907|pid:none) Arabidopsis thaliana clone 0000012... 62 5e-08 DQ443432_1(DQ443432|pid:none) Bombyx mori syntaxin mRNA, complet... 62 7e-08 CR382131_486(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 62 9e-08 AM494966_8(AM494966|pid:none) Leishmania braziliensis chromosome... 62 9e-08 AM451360_1(AM451360|pid:none) Vitis vinifera contig VV78X017344.... 62 9e-08 (Q8VZU2) RecName: Full=Syntaxin-132; Short=AtSYP132; &... 61 1e-07 AL357612_2(AL357612|pid:none) Arabidopsis thaliana DNA chromosom... 61 1e-07 (Q9SXB0) RecName: Full=Syntaxin-125; Short=AtSYP125; &... 61 1e-07 AY815913_1(AY815913|pid:none) Schistosoma japonicum SJCHGC01269 ... 60 3e-07 CR855932_1(CR855932|pid:none) Paramecium tetraurelia macronuclea... 59 4e-07 AM055943_195(AM055943|pid:none) Toxoplasma gondii RH, genomic DN... 59 6e-07 CR382131_1375(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 59 7e-07 CR956405_5(CR956405|pid:none) Pig DNA sequence from clone CH242-... 58 1e-06 BT069612_1(BT069612|pid:none) Zea mays full-length cDNA clone ZM... 58 1e-06 (Q9C615) RecName: Full=Putative syntaxin-24; Short=AtSY... 58 1e-06 AC118133_15(AC118133|pid:none) Oryza sativa chromosome 3 BAC OSJ... 58 1e-06 AK107080_1(AK107080|pid:none) Oryza sativa Japonica Group cDNA c... 58 1e-06 CP001576_548(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 58 1e-06 EF087693_1(EF087693|pid:none) Picea sitchensis clone WS02735_M21... 57 2e-06 FN392321_944(FN392321|pid:none) Pichia pastoris GS115 chromosome... 56 4e-06 AC007767_3(AC007767|pid:none) Sequence of BAC F5D14 from Arabido... 56 5e-06 (Q9ZQZ8) RecName: Full=Syntaxin-123; Short=AtSYP123; &... 56 5e-06 CR855931_1(CR855931|pid:none) Paramecium tetraurelia macronuclea... 55 6e-06 CT005266_154(CT005266|pid:none) Leishmania major strain Friedlin... 55 6e-06 CP000596_6(CP000596|pid:none) Ostreococcus lucimarinus CCE9901 c... 55 6e-06 CT005266_153(CT005266|pid:none) Leishmania major strain Friedlin... 55 6e-06 CR855925_1(CR855925|pid:none) Paramecium tetraurelia macronuclea... 55 8e-06 CR855914_1(CR855914|pid:none) Paramecium tetraurelia macronuclea... 55 8e-06 T21862(T21862)hypothetical protein F36F2.4 - Caenorhabditis eleg... 55 8e-06 Z81532_2(Z81532|pid:none) Caenorhabditis elegans Cosmid F36F2, c... 55 8e-06 AE014188_409(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 55 8e-06 CR382121_445(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 55 8e-06 CR855924_1(CR855924|pid:none) Paramecium tetraurelia macronuclea... 55 1e-05 AF112863_1(AF112863|pid:none) Nicotiana tabacum syntaxin-related... 55 1e-05 CU928174_405(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 55 1e-05 AJ319905_1(AJ319905|pid:none) Agaricus bisporus syn1 gene for pu... 55 1e-05 (Q9P6P1) RecName: Full=t-SNARE affecting a late Golgi compartmen... 55 1e-05 AY247217_1(AY247217|pid:none) Hordeum vulgare subsp. vulgare syn... 54 2e-05 AY693218_1(AY693218|pid:none) Saccharomyces cerevisiae clone FLH... 54 2e-05 CU928179_170(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 54 2e-05 DQ867120_1(DQ867120|pid:none) Nicotiana benthamiana syntaxin (SY... 54 2e-05 AJ249504_1(AJ249504|pid:none) Capsicum annuum mRNA for Knolle (k... 54 2e-05 (Q08144) RecName: Full=T-SNARE affecting a late Golgi compartmen... 54 2e-05 CR380953_381(CR380953|pid:none) Candida glabrata strain CBS138 c... 54 2e-05 AK229983_1(AK229983|pid:none) Arabidopsis thaliana mRNA for synt... 54 2e-05 BT051737_1(BT051737|pid:none) Medicago truncatula clone MTYF5_F6... 54 2e-05 AJ549977_1(AJ549977|pid:none) Antirrhinum majus partial mRNA for... 53 3e-05 AB295618_1(AB295618|pid:none) Nicotiana tabacum NtSYP41 mRNA for... 53 3e-05 AP003977_16(AP003977|pid:none) Oryza sativa Japonica Group genom... 53 3e-05 (Q3SWZ3) RecName: Full=Syntaxin-4; &BC104588_1(BC104588|pid:none) 52 5e-05 BC077572_1(BC077572|pid:none) Xenopus laevis syntaxin 1B2, mRNA ... 52 7e-05 AM483348_1(AM483348|pid:none) Vitis vinifera contig VV78X143603.... 52 7e-05 AJ245407_1(AJ245407|pid:none) Arabidopsis thaliana mRNA for synt... 52 9e-05 AE016818_321(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 52 9e-05 BC052023_1(BC052023|pid:none) Mus musculus syntaxin 4A (placenta... 52 9e-05 AK145909_1(AK145909|pid:none) Mus musculus 13 days pregnant adul... 52 9e-05 BT034544_1(BT034544|pid:none) Zea mays full-length cDNA clone ZM... 51 1e-04 (Q9SVC2) RecName: Full=Syntaxin-122; Short=AtSYP122; Al... 51 1e-04 H88451(H88451)protein ZC155.3 [imported] - Caenorhabditis elegans 51 1e-04 BC123926_1(BC123926|pid:none) Xenopus tropicalis syntaxin 2, mRN... 51 1e-04 AK296652_1(AK296652|pid:none) Homo sapiens cDNA FLJ57517 complet... 51 1e-04 U00064_2(U00064|pid:none) Caenorhabditis elegans cosmid ZC155, c... 51 1e-04 BT033366_1(BT033366|pid:none) Zea mays full-length cDNA clone ZM... 50 2e-04 (Q08850) RecName: Full=Syntaxin-4; &E48213(E48213) &L20821_1(L2... 50 2e-04 FN357300_25(FN357300|pid:none) Schistosoma mansoni genome sequen... 50 2e-04 AP008212_94(AP008212|pid:none) Oryza sativa (japonica cultivar-g... 50 2e-04 AK243105_1(AK243105|pid:none) Oryza sativa Japonica Group cDNA, ... 50 2e-04 EU965324_1(EU965324|pid:none) Zea mays clone 285274 syntaxin-rel... 50 3e-04 D14582_1(D14582|pid:none) Homo sapiens mRNA for epimorphin, comp... 50 3e-04 FN357329_3(FN357329|pid:none) Schistosoma mansoni genome sequenc... 50 3e-04 AM441647_5(AM441647|pid:none) Vitis vinifera contig VV78X138218.... 50 3e-04 (P32856) RecName: Full=Syntaxin-2; AltName: Full=Epimorphin; &J... 50 3e-04 AJ245408_1(AJ245408|pid:none) Arabidopsis thaliana mRNA for synt... 50 3e-04 FN392319_797(FN392319|pid:none) Pichia pastoris GS115 chromosome... 50 3e-04 (Q9SUJ1) RecName: Full=Syntaxin-43; Short=AtSYP43; &AC... 50 3e-04 (Q20797) RecName: Full=Putative syntaxin-3; &T22686(T22686) &Z7... 50 3e-04 CR956405_6(CR956405|pid:none) Pig DNA sequence from clone CH242-... 49 4e-04 AF262964_1(AF262964|pid:none) Neurospora crassa putative SNARE p... 49 4e-04 AB076670_1(AB076670|pid:none) Coturnix coturnix mRNA for epimorp... 49 6e-04 (Q9ZSD4) RecName: Full=Syntaxin-121; Short=AtSYP121; Al... 49 8e-04 AY247215_1(AY247215|pid:none) Hordeum vulgare subsp. vulgare syn... 49 8e-04 BC135808_1(BC135808|pid:none) Xenopus tropicalis hypothetical pr... 49 8e-04 AK165552_1(AK165552|pid:none) Mus musculus B cells CRL-1669 BCL1... 49 8e-04 AY128886_1(AY128886|pid:none) Arabidopsis thaliana putative synt... 49 8e-04 U85807_1(U85807|pid:none) Hirudo medicinalis syntaxin 1 homolog ... 49 8e-04 AY246906_1(AY246906|pid:none) Hordeum vulgare subsp. vulgare syn... 48 0.001 AC084296_6(AC084296|pid:none) Oryza sativa chromosome 3 BAC OSJN... 48 0.001 D45207_1(D45207|pid:none) Mus musculus mRNA for syntaxin1B, comp... 48 0.001 AY663789_1(AY663789|pid:none) Lateolabrax japonicus t-SNARE synt... 48 0.001 AK318877_1(AK318877|pid:none) Arabidopsis thaliana AT5G26980 mRN... 48 0.001 (Q00262) RecName: Full=Syntaxin-2; AltName: Full=Epimorphin; &D... 48 0.001 AL772314_5(AL772314|pid:none) Zebrafish DNA sequence from clone ... 48 0.001 (P61267) RecName: Full=Syntaxin-1B; AltName: Full=Syntaxin-1B2; ... 48 0.001 (P61264) RecName: Full=Syntaxin-1B; &(P61265) RecName: Fu &(P61... 48 0.001 BT047950_1(BT047950|pid:none) Salmo salar clone ssal-rgb2-571-12... 48 0.001 AF240771_1(AF240771|pid:none) Macaca mulatta syntaxin 1A mRNA, c... 47 0.002 (P32851) RecName: Full=Syntaxin-1A; AltName: Full=Synaptotagmin-... 47 0.002 AB261071_1(AB261071|pid:none) Entamoeba histolytica gene for EhS... 47 0.002 CR855926_1(CR855926|pid:none) Paramecium tetraurelia macronuclea... 47 0.002 G01485(G01485) syntaxin - human &U12918_1(U12918|pid:none) 47 0.002 L20888_1(L20888|pid:none) Rattus norvegicus syntaxin 2'' mRNA, c... 47 0.002 AE014188_101(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 47 0.002 (Q01590) RecName: Full=Integral membrane protein SED5; &A44019(... 47 0.002 EU968220_1(EU968220|pid:none) Zea mays clone 316796 syntaxin 121... 47 0.002 U35047_1(U35047|pid:none) Rattus norvegicus epimorphin (Epim) ge... 47 0.003 AM494965_164(AM494965|pid:none) Leishmania braziliensis chromoso... 47 0.003 CP000586_322(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 47 0.003 AM910996_595(AM910996|pid:none) Plasmodium knowlesi strain H chr... 47 0.003 AY222910_1(AY222910|pid:none) Schistosoma japonicum SJCHGC06512 ... 47 0.003 FN359252_4(FN359252|pid:none) Schistosoma mansoni genome sequenc... 47 0.003 C48213(C48213)syntaxin 2 - rat 47 0.003 CR855929_1(CR855929|pid:none) Paramecium tetraurelia macronuclea... 47 0.003 (Q20574) RecName: Full=Putative syntaxin-2; &Z69661_3(Z69661|pi... 47 0.003 AY995211_1(AY995211|pid:none) Homo sapiens syntaxin 1B alternati... 46 0.004 AY725478_1(AY725478|pid:none) Lateolabrax japonicus t-SNARE synt... 46 0.004 FN314141_1(FN314141|pid:none) Schistosoma japonicum isolate Anhu... 46 0.004 AM442013_1(AM442013|pid:none) Vitis vinifera contig VV78X248633.... 46 0.004 AM502253_255(AM502253|pid:none) Leishmania infantum chromosome 35. 46 0.005 (Q9ZPV9) RecName: Full=Syntaxin-112; Short=AtSYP112; &... 46 0.005 CP000081_268(CP000081|pid:none) Leishmania major chromosome 35, ... 46 0.005 AM920436_1356(AM920436|pid:none) Penicillium chrysogenum Wiscons... 46 0.005 (Q9SWH4) RecName: Full=Syntaxin-42; Short=AtSYP42; ... 45 0.006 CR855927_1(CR855927|pid:none) Paramecium tetraurelia macronuclea... 45 0.006 AM494971_261(AM494971|pid:none) Leishmania braziliensis chromoso... 45 0.008 AC114263_45(AC114263|pid:none) Dictyostelium discoideum chromoso... 45 0.008 CU928179_850(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 45 0.011 AY344235_1(AY344235|pid:none) Trichomonas vaginalis syntaxin 16/... 45 0.011 FN357908_3(FN357908|pid:none) Schistosoma mansoni genome sequenc... 45 0.011 CR940348_638(CR940348|pid:none) Theileria annulata strain Ankara... 45 0.011 D78271_1(D78271|pid:none) Loligo pealei mRNA for syntaxin, compl... 44 0.014 (O16000) RecName: Full=Syntaxin-1A homolog; AltName: Full=Uncoor... 44 0.014 AF333035_1(AF333035|pid:none) Strongylocentrotus purpuratus synt... 44 0.014 AF014122_1(AF014122|pid:none) Strongylocentrotus purpuratus synt... 44 0.019 AX888192_1(AX888192|pid:none) Sequence 4055 from Patent EP1033401. 44 0.019 AE016819_443(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 44 0.019 (A8WVD0) RecName: Full=Syntaxin-1A; AltName: Full=Uncoordinated ... 44 0.019 DQ068409_1(DQ068409|pid:none) Caenorhabditis remanei strain EM46... 44 0.025 BT041829_1(BT041829|pid:none) Zea mays full-length cDNA clone ZM... 44 0.025 AY616763_1(AY616763|pid:none) Solanum tuberosum PEN1 gene, parti... 44 0.025 AM270081_7(AM270081|pid:none) Aspergillus niger contig An04c0200... 43 0.032 BC167279_1(BC167279|pid:none) Xenopus tropicalis hypothetical pr... 43 0.042 (Q16932) RecName: Full=Syntaxin; &AY764183_1(AY764183|pid:none)... 43 0.042 BC108539_1(BC108539|pid:none) Xenopus laevis hypothetical protei... 43 0.042 AF387641_1(AF387641|pid:none) Limulus polyphemus syntaxin 1A mRN... 42 0.055 FN357317_52(FN357317|pid:none) Schistosoma mansoni genome sequen... 42 0.072 AF293409_1(AF293409|pid:none) Giardia intestinalis syntaxin-like... 42 0.072 BC067164_1(BC067164|pid:none) Danio rerio syntaxin 11a, mRNA (cD... 42 0.094 BT074979_1(BT074979|pid:none) Osmerus mordax clone omor-rgc-520-... 41 0.12 CT005269_7(CT005269|pid:none) Leishmania major strain Friedlin, ... 41 0.12 CP000500_173(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 41 0.12 BT059204_1(BT059204|pid:none) Salmo salar clone ssal-rgf-532-164... 41 0.16 AK018526_1(AK018526|pid:none) Mus musculus adult male colon cDNA... 41 0.16 AK014718_1(AK014718|pid:none) Mus musculus 0 day neonate head cD... 41 0.16 AE017348_133(AE017348|pid:none) Cryptococcus neoformans var. neo... 41 0.16 (Q9D0I4) RecName: Full=Syntaxin-17; &AK011400_1(AK011400|pid:no... 41 0.16 EF583658_1(EF583658|pid:none) Hypocrea jecorina SSOII (Sso2) mRN... 41 0.16 AF404743_1(AF404743|pid:none) Giardia intestinalis syntaxin 16 g... 40 0.21 AK343137_1(AK343137|pid:none) Acyrthosiphon pisum ACYPI005967 mR... 40 0.21 AM910994_208(AM910994|pid:none) Plasmodium knowlesi strain H chr... 40 0.21 AM502251_143(AM502251|pid:none) Leishmania infantum chromosome 33. 40 0.21 E89697(E89697)protein F48F7.2 [imported] - Caenorhabditis elegans 40 0.21 BC073006_1(BC073006|pid:none) Xenopus laevis hypothetical protei... 40 0.21 BC092152_1(BC092152|pid:none) Xenopus laevis cDNA clone IMAGE:69... 40 0.27 (Q4VBI7) RecName: Full=Syntaxin-18; &BC095763_1(BC095763|pid:no... 40 0.36 CP001322_3054(CP001322|pid:none) Desulfatibacillum alkenivorans ... 40 0.36 AF007270_16(AF007270|pid:none) Arabidopsis thaliana BAC F2P16, c... 40 0.36 AF075597_14(AF075597|pid:none) Arabidopsis thaliana BAC T2H3. 39 0.46 AL844509_316(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.61 FN316926_1(FN316926|pid:none) Schistosoma japonicum isolate Anhu... 39 0.79 AB261072_1(AB261072|pid:none) Entamoeba histolytica gene for EhS... 39 0.79 AY815487_1(AY815487|pid:none) Schistosoma japonicum SJCHGC06288 ... 39 0.79 EF083775_1(EF083775|pid:none) Picea sitchensis clone WS02814_M21... 39 0.79 AP006852_396(AP006852|pid:none) Candida albicans genomic DNA, ch... 39 0.79 CR940352_351(CR940352|pid:none) Theileria annulata strain Ankara... 39 0.79 EU972283_1(EU972283|pid:none) Zea mays clone 379070 unknown mRNA. 38 1.0 AE014187_298(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 38 1.0 AE016816_272(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 38 1.0 AM270261_4(AM270261|pid:none) Aspergillus niger contig An12c0040... 38 1.4 BC082852_1(BC082852|pid:none) Xenopus laevis hypothetical LOC494... 38 1.4 AK151549_1(AK151549|pid:none) Mus musculus bone marrow macrophag... 37 1.8 U13986_1(U13986|pid:none) Schistosoma japonicum (JF-2) mRNA, par... 37 1.8 (Q68FW4) RecName: Full=Syntaxin-18; &BC079183_1(BC079183|pid:no... 37 1.8 AY894066_1(AY894066|pid:none) Synthetic construct Homo sapiens c... 37 2.3 (Q5REB4) RecName: Full=Syntaxin-18; &CR857618_1(CR857618|pid:no... 37 2.3 AY890848_1(AY890848|pid:none) Synthetic construct Homo sapiens c... 37 2.3 BC133525_1(BC133525|pid:none) Bos taurus syntaxin 6, mRNA (cDNA ... 37 2.3 CR541873_1(CR541873|pid:none) Homo sapiens full open reading fra... 37 2.3 AY892776_1(AY892776|pid:none) Synthetic construct Homo sapiens c... 37 2.3 CR954206_14(CR954206|pid:none) Ostreococcus tauri strain OTTH059... 37 2.3 (O43752) RecName: Full=Syntaxin-6; &(Q5R6Q2) RecName: Fu &AJ002... 37 2.3 AY888499_1(AY888499|pid:none) Synthetic construct Homo sapiens c... 37 2.3 (Q63635) RecName: Full=Syntaxin-6; &BC081769_1(BC081769|pid:non... 37 2.3 (Q9JKK1) RecName: Full=Syntaxin-6; &AF237814_1(AF237814|pid:non... 37 2.3 AX886794_1(AX886794|pid:none) Sequence 2657 from Patent EP1033401. 37 3.0 CR954211_16(CR954211|pid:none) Ostreococcus tauri strain OTTH059... 37 3.0 BC142214_1(BC142214|pid:none) Bos taurus syntaxin 18, mRNA (cDNA... 37 3.0 AK159392_1(AK159392|pid:none) Mus musculus osteoclast-like cell ... 37 3.0 BX323843_4(BX323843|pid:none) Zebrafish DNA sequence from clone ... 37 3.0 CP000109_1894(CP000109|pid:none) Thiomicrospira crunogena XCL-2,... 36 3.9 CP000867_71(CP000867|pid:none) Methanococcus maripaludis C6, com... 36 5.1 BC150731_1(BC150731|pid:none) Mus musculus golgi autoantigen, go... 36 5.1 CU640366_1039(CU640366|pid:none) Podospora anserina genomic DNA ... 35 6.7 BC053819_1(BC053819|pid:none) Xenopus laevis hypothetical protei... 35 6.7 CP000568_2938(CP000568|pid:none) Clostridium thermocellum ATCC 2... 35 6.7 (P53739) RecName: Full=Probable serine/threonine-protein kinase ... 35 6.7 AK091802_1(AK091802|pid:none) Homo sapiens cDNA FLJ34483 fis, cl... 35 8.8 CP000494_607(CP000494|pid:none) Bradyrhizobium sp. BTAi1, comple... 35 8.8 CR857679_1(CR857679|pid:none) Pongo abelii mRNA; cDNA DKFZp469D2... 35 8.8
>EF085435_1(EF085435|pid:none) Picea sitchensis clone WS0299_A10 unknown mRNA. &EF678124_1(EF678124|pid:none) Length = 273
Score = 126 bits (317), Expect = 2e-27 Identities = 79/247 (31%), Positives = 131/247 (53%), Gaps = 1/247 (0%) Frame = +2
Query: 380 QSTTRNIQQIQNAVQILTKLVQLLGTPKDSMDTREKIRNCVDSTTHLISSESGKVKNLTS 559 Q+ + QI AV +LV LGTPKD+ + RE++ L+ S K+K + Sbjct: 27 QAVASGVFQINTAVSTFQRLVNTLGTPKDTPELRERLHKTRQHIGQLVKDTSAKLKAASE 86
Query: 560 LASRSRDSKNKLLYQ-KLVKEFNNCLQQFKDIAQVATKKEKTTPLPVAPDHQQPTTTFGR 736 + S NK + KL K+F L++F+ ++A ++E T P P P++ Sbjct: 87 TDQHTEVSANKKIADAKLAKDFQAVLKEFQKAQRLAAERE-TAYTPFIPQAVLPSSYIAS 145
Query: 737 XXXXXXXXXXXXXXXXXXPYYDDDNREDEHQSLMESSRRQQLAQIEAEREYQNSIIQERD 916 ++ E Q+L+ SRRQ++ Q+E E + +II+ER+ Sbjct: 146 ELGL------------------SPDKTQEQQALLIESRRQEVLQLENEVVFNEAIIEERE 187
Query: 917 EGIRKIEQSIVEINEIFVDLSGLVAEQGVMINTIEASLESTTINTKEGVNHLREASKNQK 1096 +G+++I+Q I E+NEIF DL+ LV EQGVMI+ I++++ES+ T + + L +ASK+QK Sbjct: 188 QGLQEIQQQIGEVNEIFKDLAVLVHEQGVMIDDIDSNIESSYSATVQAKSQLAKASKSQK 247
Query: 1097 SSRNKMC 1117 S+ + C Sbjct: 248 SNSSLTC 254
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3268448 Number of Hits to DB: 1,425,021,631 Number of extensions: 28655241 Number of successful extensions: 72781 Number of sequences better than 10.0: 312 Number of HSP's gapped: 68032 Number of HSP's successfully gapped: 345 Length of query: 581 Length of database: 1,061,185,681 Length adjustment: 134 Effective length of query: 447 Effective length of database: 623,213,649 Effective search space: 278576501103 Effective search space used: 278576501103 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
2 |
VH (FL, L) |
0 |
VF (FL, S) |
0 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
6 |
SS (DIR, S) |
0 |
SH (FL, L) |
0 |
SF (FL, S) |
0 |
CH (FL, L) |
0 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |