Contig-U03274-1 |
Contig ID |
Contig-U03274-1 |
Contig update |
2002. 9.13 |
Contig sequence |
|
Gap |
no gap |
Contig length |
1655 |
Chromosome number (1..6, M) |
2 |
Chromosome length |
8467578 |
Start point |
3696139 |
End point |
3697794 |
Strand (PLUS/MINUS) |
PLUS |
Number of clones |
3 |
Number of EST |
6 |
Link to clone list |
U03274 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6. 9 |
Homology vs CSM-cDNA |
|
dna update |
2009. 5.29 |
Homology vs DNA |
Query= Contig-U03274-1 (Contig-U03274-1Q) /CSM_Contig/Contig-U03274-1Q.Seq.d (1655 letters)
Database: ddbj_A 102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(AY593970) Dictyostelium discoideum copine B (cpnB) mRNA, co... 2167 0.0 2 (AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 1544 0.0 2 (AU061855) Dictyostelium discoideum slug cDNA, clone SLG357. 1241 0.0 1 (BJ372952) Dictyostelium discoideum cDNA clone:ddc15i02, 3' ... 882 0.0 3 (BJ359503) Dictyostelium discoideum cDNA clone:ddc15i02, 5' ... 1037 0.0 2 (AU036986) Dictyostelium discoideum slug cDNA, clone SSA705. 1013 0.0 2 (AU039760) Dictyostelium discoideum slug cDNA, clone SLG357. 753 0.0 2 (AU072725) Dictyostelium discoideum slug cDNA, clone SSA705. 311 5e-80 1 (AY332759) Dictyostelium discoideum copine a (cpna) mRNA, co... 68 6e-26 5 (BJ415291) Dictyostelium discoideum cDNA clone:ddv22h04, 5' ... 68 6e-18 3 (BJ433506) Dictyostelium discoideum cDNA clone:ddv22h04, 3' ... 54 1e-14 4 (AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 38 8e-05 12 (AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 36 9e-05 15 (CP000061) Aster yellows witches'-broom phytoplasma AYWB, co... 34 4e-04 22 (AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 32 0.002 12 (CP000743) Methanococcus aeolicus Nankai-3, complete genome. 36 0.005 20 (AM422018) Candidatus Phytoplasma australiense complete genome. 38 0.008 21 (AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 36 0.008 14 (EJ448564) 1093015386145 Global-Ocean-Sampling_GS-28-01-01-1... 50 0.008 2 (AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 32 0.008 15 (CP001185) Thermosipho africanus TCF52B, complete genome. 38 0.016 21 (CU469464) Candidatus Phytoplasma mali strain AT complete ch... 40 0.031 18 (CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 34 0.035 20 (AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 38 0.063 14 (AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 34 0.066 18 (BD035376) Sequence tag and encoded human protein. 52 0.070 1 (AX899843) Sequence 15706 from Patent EP1033401. 52 0.070 1 (AR961237) Sequence 15706 from patent US 7115416. 52 0.070 1 (AR735637) Sequence 15706 from patent US 6783961. 52 0.070 1 (AL031287) Human DNA sequence from clone RP4-703H14 on chrom... 52 0.070 1 (AC069147) Homo sapiens chromosome 1 clone RP11-105H9, WORKI... 52 0.070 1 (AC026140) Homo sapiens chromosome 1 clone RP11-300C7 map 1,... 52 0.070 1 (FC813958) Sr_pASP6_016c21_SP6 S. ratti mixed stage pAMP Str... 52 0.070 1 (CU424490) Medicago truncatula chromosome 5 clone mth2-95h16... 36 0.072 7 (AC116924) Dictyostelium discoideum chromosome 2 map 6357117... 36 0.083 11 (AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 30 0.086 16 (FB571326) Sequence 193 from Patent EP1865317. 32 0.093 10 (AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 38 0.094 13 (CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 32 0.095 20 (X03240) Drosophila yakuba complete mitochondrial sequence. 32 0.11 7 (BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 36 0.13 23 (AC203060) Acyrthosiphon pisum BAC VMRC38-30-A10 (Benaroya ... 40 0.14 8 (AE014839) Plasmodium falciparum 3D7 chromosome 11 section 4... 34 0.14 12 (AC217677) Populus trichocarpa clone Pop1-97L17, complete se... 32 0.16 10 (AX344564) Sequence 15 from Patent WO0200932. 32 0.17 16 (AX345093) Sequence 164 from Patent WO0200928. 38 0.19 5 (AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 34 0.19 12 (FB571382) Sequence 249 from Patent EP1865317. 32 0.22 9 (CP000882) Hemiselmis andersenii chromosome 2, complete sequ... 36 0.25 13 (AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 34 0.27 14 (BJ434632) Dictyostelium discoideum cDNA clone:ddv24a17, 3' ... 50 0.28 1 (BQ510784) EST618199 Generation of a set of potato cDNA clon... 38 0.30 3 (AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 40 0.31 14 (CS468878) Sequence 69 from Patent EP1748080. 40 0.31 14 (CS419355) Sequence 69 from Patent WO2006094836. 40 0.31 14 (CR936424) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 0.32 9 (CU019623) Zebrafish DNA sequence from clone CH211-119M14 in... 36 0.32 7 (AC156206) Bos taurus clone CH240-39N6, WORKING DRAFT SEQUEN... 34 0.36 10 (AM445413) Vitis vinifera, whole genome shotgun sequence, co... 36 0.43 6 (EJ548670) 1092959423395 Global-Ocean-Sampling_GS-29-01-01-1... 42 0.44 2 (CU367882) H.melpomene DNA sequence from clone AEHM-11J7. 36 0.44 10 (AM285311) Spiroplasma citri GII3-3X chromosome, contig Cont... 32 0.45 9 (AZ692966) ENTMB02TF Entamoeba histolytica Sheared DNA Entam... 42 0.47 2 (CP000939) Clostridium botulinum B1 str. Okra, complete genome. 44 0.52 22 (AX458634) Sequence 180 from Patent WO0246454. 32 0.56 8 (AC011386) Homo sapiens chromosome 5 clone CTB-15P5, complet... 44 0.57 6 (AC167396) Bos taurus clone CH240-98D18, WORKING DRAFT SEQUE... 32 0.64 10 (AL844506) Plasmodium falciparum chromosome 7. 36 0.65 15 (AC079227) Homo sapiens BAC clone RP11-80B23 from 4, complet... 38 0.69 11 (CR936910) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 32 0.72 11 (AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 38 0.72 12 (AC116919) Dictyostelium discoideum chromosome 2 map complem... 32 0.72 7 (EY499160) CBBP4527.fwd CBBP Hirudo medicinalis hermaphrodit... 38 0.79 2 (CP001047) Mycoplasma arthritidis 158L3-1, complete genome. 32 0.79 21 (AU061493) Dictyostelium discoideum slug cDNA, clone SLE441. 34 0.80 2 (AC120748) Rattus norvegicus clone CH230-26F16, *** SEQUENCI... 40 0.82 6 (AC162784) Danio rerio clone CH211-47A6, WORKING DRAFT SEQUE... 38 0.84 7 (CP000021) Vibrio fischeri ES114 chromosome II, complete seq... 36 0.87 18 (AM459865) Vitis vinifera contig VV78X178844.5, whole genome... 32 0.92 6 (BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 36 1.0 15 (CU929163) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 1.0 8 (AC137079) Medicago truncatula clone mth2-27d17, complete se... 40 1.0 5 (AL928832) Mouse DNA sequence from clone RP23-261N18 on chro... 48 1.1 1 (AC158535) Mus musculus BAC clone RP23-28J6 from chromosome ... 48 1.1 1 (AM443644) Vitis vinifera, whole genome shotgun sequence, co... 48 1.1 1 (U59448) Hydra vulgaris receptor tyrosine kinase 90 (HTK90) ... 48 1.1 1 (AC149957) Strongylocentrotus purpuratus clone R3-32B13, WOR... 48 1.1 1 (AC130169) Rattus norvegicus clone CH230-39E11, WORKING DRAF... 48 1.1 1 (AC107639) Mus musculus clone RP23-49H9, *** SEQUENCING IN P... 48 1.1 1 (EJ979068) 1093022141162 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.1 1 (EJ970897) 1093022081250 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.1 1 (DX528524) GH_MBb0060J03f GH_MBb Gossypium hirsutum genomic ... 48 1.1 1 (EG012181) STDB003H19u STDB Solanum tuberosum cDNA clone STD... 48 1.1 1 (EE061787) zf_eli7_C05 Embryonic library Taeniopygia guttata... 48 1.1 1 (EE061518) zf_eli49_C02 Embryonic library Taeniopygia guttat... 48 1.1 1 (EE056818) zf_60d3k4_D09 Developmental library III Taeniopyg... 48 1.1 1 (EE053567) ZF30D-2_C3 Developmental library II Taeniopygia g... 48 1.1 1 (DV574213) 0058P0036A04_5' library 58 - normalized (50 mix p... 48 1.1 1 (DV574212) 0058P0036A04_3' library 58 - normalized (50 mix p... 48 1.1 1 (AM876699) Venerupis (Ruditapes) philippinarum EST, 5' end s... 48 1.1 1 (CK277064) EST723142 potato abiotic stress cDNA library Sola... 48 1.1 1 (BQ513580) EST620995 Generation of a set of potato cDNA clon... 48 1.1 1 (BM111910) EST559446 potato roots Solanum tuberosum cDNA clo... 48 1.1 1 (FG872015) UCRVU07_CCNP7707_g1 Cowpea UCR 779 Mixed Tissue a... 48 1.1 1 (FG841515) UCRVU05_CCNN4631_g1 Cowpea IT84S-2049 Mixed Tissu... 48 1.1 1 (FF399018) MOOER41TF MOO Vigna unguiculata cDNA 5', mRNA seq... 48 1.1 1 (AC067835) Homo sapiens chromosome 15 clone RP11-510B19 map ... 40 1.1 6 (AC027498) Homo sapiens chromosome 1 clone RP11-656L11 map 1... 42 1.3 9 (AL445564) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 36 1.3 13 (CR388084) Zebrafish DNA sequence from clone CH211-234D12 in... 42 1.3 5 (AP010304) Lotus japonicus genomic DNA, chromosome 6, clone:... 36 1.3 7 (Z82280) Caenorhabditis elegans Cosmid R05A10. 36 1.5 5 (AC153890) Mus musculus BAC RP23-403C13 (Roswell Park Cance... 38 1.5 8 (CP000883) Hemiselmis andersenii chromosome 3, complete sequ... 38 1.6 12 (BX322612) Zebrafish DNA sequence from clone RP71-80O10 in l... 38 1.7 9 (CU928681) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 1.7 9 (BX004966) Zebrafish DNA sequence from clone DKEY-5E12 in li... 34 1.8 9 (CR405684) Zebrafish DNA sequence from clone DKEY-186I17 in ... 34 1.9 4 (EK062084) 1092960093645 Global-Ocean-Sampling_GS-31-01-01-1... 36 1.9 2 (AX346569) Sequence 1640 from Patent WO0200928. 36 1.9 5 (AC230368) Bos taurus clone CH240-511A13, WORKING DRAFT SEQU... 32 2.0 8 (AC163874) Bos taurus clone CH240-139F20, *** SEQUENCING IN ... 38 2.0 6 (DD010735) Diagnosis of known genetic Parameters within the ... 38 2.1 12 (EU139068) Solanum lycopersicum chromosome 9 clone C09HBa002... 34 2.1 10 (AC006280) Plasmodium falciparum chromosome 12 clone PFYAC72... 36 2.1 12 (AC119390) Rattus norvegicus clone CH230-260D24, WORKING DRA... 32 2.2 2 (AF030027) Equine herpesvirus 4 strain NS80567, complete gen... 32 2.2 2 (EA029086) Sequence 2 from patent US 7141243. 32 2.2 2 (ET814347) CHO_OF744xn23f1.ab1 CHO_OF Nicotiana tabacum geno... 34 2.2 3 (FP236666) Brassica rapa subsp. pekinensis clone KBrH135L02,... 38 2.5 10 (AC209608) Saimiri boliviensis boliviensis clone CH254-471D1... 32 2.5 10 (AX356423) Sequence 57 from Patent WO0181622. 34 2.5 2 (AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 34 2.7 12 (GD184934) Ferret_015_K10 Ferret library from spleen, liver,... 36 2.7 2 (CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 36 2.8 19 (FH600414) CHO_OF4646xk02r1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 2.8 2 (AC121913) Mus musculus BAC clone RP24-185E15 from chromosom... 38 2.8 6 (ED528152) KBrB118B24R KBrB, Brassica rapa BamHI BAC library... 40 2.9 2 (AX344573) Sequence 24 from Patent WO0200932. 34 3.0 16 (CP000025) Campylobacter jejuni RM1221, complete genome. 40 3.0 19 (CZ172519) MIAA-15G15b.g1 Meloidogyne incognita BAC end sequ... 36 3.0 2 (CT573356) Zebrafish DNA sequence from clone CH211-276F18 in... 36 3.2 8 (AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69... 34 3.2 11 (AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 32 3.2 12 (AM465593) Vitis vinifera, whole genome shotgun sequence, co... 36 3.3 4 (AL844509) Plasmodium falciparum chromosome 13. 34 3.3 13 (AC135795) Medicago truncatula clone mth2-28g10, complete se... 40 3.3 7 (CR954187) Medicago truncatula chromosome 5 clone mth2-181i2... 34 3.4 6 (BJ429091) Dictyostelium discoideum cDNA clone:ddv2h08, 3' e... 38 3.5 3 (CR931646) Streptococcus pneumoniae strain T9233/128/68 (ser... 32 3.8 6 (CR931647) Streptococcus pneumoniae strain 533/62 (serotype ... 32 3.8 6 (DD147298) A method for examining secondary hyperparathyroid... 40 3.8 3 (AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont... 36 3.9 14 (CP000678) Methanobrevibacter smithii ATCC 35061, complete g... 34 4.0 20 (AC232545) Brassica rapa subsp. pekinensis clone KBrH006K14,... 40 4.1 5 (AC016758) Homo sapiens BAC clone RP11-535E19 from 2, comple... 34 4.2 5 (AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 34 4.3 15 (CP001056) Clostridium botulinum B str. Eklund 17B, complete... 42 4.3 22 (BX511140) Zebrafish DNA sequence from clone DKEY-264G21 in ... 34 4.3 8 (CU929341) Zebrafish DNA sequence from clone CH1073-171J9 in... 46 4.3 1 (CU633856) Zebrafish DNA sequence from clone CH1073-32F19 in... 46 4.3 1 (CR925802) Zebrafish DNA sequence from clone DKEYP-47G2 in l... 46 4.3 1 (AL596064) Zebrafish DNA sequence from clone BUSM1-55K10 in ... 46 4.3 1 (U40030) Caenorhabditis elegans cosmid T13C2, complete seque... 46 4.3 1 (AC162767) Atelerix albiventris clone LB4-305O15, WORKING DR... 46 4.3 1 (AC146654) Otolemur garnettii clone CH256-212D23, WORKING DR... 46 4.3 1 (FP101979) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 4.3 1 (CU915681) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 4.3 1 (CU855960) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 4.3 1 (AC231870) Solanum tuberosum chromosome 6 clone RHPOTKEY038C... 46 4.3 1 (AC215174) Zea mays chromosome 5 clone CH201-70P8; ZMMBBc007... 46 4.3 1 (AC207866) Spermophilus tridecemlineatus clone VMRC20-232J12... 46 4.3 1 (AC206911) Macaca mulatta chromosome UNKNOWN clone CH250-158... 46 4.3 1 (AC193337) Zea mays chromosome 1 clone ZMMBBb-242O12; ZMMBBb... 46 4.3 1 (AC170727) Atelerix albiventris clone LB4-501D11, WORKING DR... 46 4.3 1 (AC170718) Atelerix albiventris clone LB4-33L18, WORKING DRA... 46 4.3 1 (AC170057) Atelerix albiventris clone LB4-249I21, WORKING DR... 46 4.3 1 (FH005703) CHO_OF401xm04f2.ab1 CHO_OF Nicotiana tabacum geno... 46 4.3 1 (ER469404) 1092963943238 Global-Ocean-Sampling_GS-35-01-01-1... 46 4.3 1 (AG673709) Macaca fuscata fuscata DNA, clone: MSB2-099K22_F,... 46 4.3 1 (BZ540774) OGAIX47TC ZM2_0.7_1.5_KB Zea mays genomic clone Z... 46 4.3 1 (BZ326716) id14g02.g1 WGS-ZmaysF (JM107 adapted methyl filte... 46 4.3 1 (EG446490) AYAHN89TF pooled cDNA populations Arabidopsis tha... 46 4.3 1 (EG426911) AYAGM95TF pooled cDNA populations Arabidopsis tha... 46 4.3 1 (DN332126) LIB3184-028-P2-K1-C12 LIB3184 Canis lupus familia... 46 4.3 1 (AU062215) Dictyostelium discoideum slug cDNA, clone SLI395. 46 4.3 1 (BM111847) EST559383 potato roots Solanum tuberosum cDNA clo... 46 4.3 1 (GE661740) CBUF4759.g1 B.anynana_abdomen_2-10kb Bicyclus any... 46 4.3 1 (CP000764) Bacillus cereus subsp. cytotoxis NVH 391-98, comp... 46 4.3 1 (CE786171) tigr-gss-dog-17000317762246 Dog Library Canis lup... 40 4.4 2 (AF250284) Amsacta moorei entomopoxvirus, complete genome. 36 4.4 13 (AC210390) Populus trichocarpa clone POP112-B23, complete se... 38 4.4 6 (AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 32 4.4 13 (EF635995) Solanum tuberosum glutaredoxin (GRX1) mRNA, compl... 38 4.5 2 (BQ510785) EST618200 Generation of a set of potato cDNA clon... 38 4.6 2 (AY048187) Bombyx mori strain Xiafang mitochondrion, complet... 38 4.7 5 (BV437123) S237P624FG6.T0 PortugueseWaterDog Canis familiari... 36 4.7 2 (ER611761) 1093016315502 Global-Ocean-Sampling_GS-36-01-01-2... 34 4.8 3 (AC141435) Medicago truncatula clone mth2-21i11, complete se... 32 4.8 10 (AC159675) Bos taurus clone CH240-66N20, WORKING DRAFT SEQUE... 32 4.8 10 (EI371167) POTC586TF Solanum tuberosum RHPOTKEY BAC ends Sol... 44 5.0 2 (EJ364537) 1092963700574 Global-Ocean-Sampling_GS-28-01-01-1... 40 5.0 2 (AC218313) Bos taurus clone CH240-287I15, WORKING DRAFT SEQU... 38 5.0 5 (DX321175) OR_ABa0239F16.r OR_ABa Oryza ridleyi genomic clon... 42 5.1 2 (CP000233) Lactobacillus salivarius UCC118, complete genome. 36 5.2 24 (ET765672) CHO_OF042xp18f1.ab1 CHO_OF Nicotiana tabacum geno... 36 5.3 2 (AE017308) Mycoplasma mobile 163K complete genome. 32 5.3 20 (CV286486) 66770.1 After-Cooking Darkening A Solanum tuberos... 38 5.4 2 (AC099820) Homo sapiens chromosome 15 clone RP11-6L16 map 15... 40 5.4 3 (AC156220) Bos taurus clone CH240-49E14, WORKING DRAFT SEQUE... 34 5.5 8 (AC146614) Mus musculus BAC clone RP23-25K16 from 1, complet... 38 5.6 7 (ET765738) CHO_OF042xp18r1.ab1 CHO_OF Nicotiana tabacum geno... 36 5.8 2 (FH654584) CHO_OF4401xp04f1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 5.8 2 (AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 36 5.8 14 (BH131449) ENTPB46TF Entamoeba histolytica Sheared DNA Entam... 38 5.9 3 (AL929354) Plasmodium falciparum strain 3D7, chromosome 5, s... 40 5.9 14 (FH654674) CHO_OF4401xp04r1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 6.0 2 (AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2... 32 6.1 16 (AC192138) Pan troglodytes chromosome X clone CH251-587L2, W... 38 6.1 6 (CT027579) Zebrafish DNA sequence from clone DKEY-239J7 in l... 38 6.2 6 (CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 34 6.3 22 (CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 34 6.3 17 (AM483976) Vitis vinifera contig VV78X278442.3, whole genome... 36 6.4 2 (AM650892) Entamoeba moshkovskii FIC GSS, clone mosh084a05.p1k. 36 6.4 2 (AL035521) Arabidopsis thaliana DNA chromosome 4, BAC clone ... 42 6.5 6 (CP000450) Nitrosomonas eutropha C91, complete genome. 34 6.5 2 (AM448584) Vitis vinifera contig VV78X212210.3, whole genome... 42 6.5 2 (AC171788) Bos taurus clone CH240-281F8, WORKING DRAFT SEQUE... 36 6.6 10 (EI895706) VUH1-79L5TR VUUBBa (VUH1) Vigna unguiculata genom... 42 6.7 2 (FG297155) 1108793275050 New World Screwworm Larvae 9387 EST... 38 6.7 2 (AX345926) Sequence 997 from Patent WO0200928. 36 6.7 4 (FP016154) Medicago truncatula chromosome 5 clone mth2-12n16... 40 7.0 5 (AC116925) Dictyostelium discoideum chromosome 2 map 4189423... 32 7.1 7 (AC219667) Bos taurus clone CH240-326I10, WORKING DRAFT SEQU... 34 7.2 9 (DX511663) 643_6_14174256_16654_43641_027 Arachis duranensis... 32 7.3 3 (BX004880) Zebrafish DNA sequence from clone CH211-69B7 in l... 36 7.3 10 (EB237058) PEG003-C-222417-501 Normalized Pedal-Pleural Gang... 42 7.3 2 (AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 32 7.4 15 (ET978410) CHO_OF692xm13f1.ab1 CHO_OF Nicotiana tabacum geno... 36 7.6 3 (AC024473) Homo sapiens chromosome 3 clone RP11-644C3 map 3,... 44 7.6 6 (CT025628) Mouse DNA sequence from clone RP23-363K7 on chrom... 32 7.8 2 (AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3... 34 7.8 13 (AC096068) Rattus norvegicus clone CH230-20F15, *** SEQUENCI... 32 7.8 2 (AC128161) Rattus norvegicus clone CH230-58G18, *** SEQUENCI... 32 7.8 2 (AY198133) Spiroplasma kunkelii strain CR2-3x partial genome... 32 7.9 9 (AC208807) Heliconius erato clone BBAM-13K22, WORKING DRAFT ... 34 7.9 2 (CU469169) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 7.9 2 (AC169455) Muntiacus muntjak vaginalis clone CH244-459K16, W... 34 8.0 2 (AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 30 8.2 12 (BJ413627) Dictyostelium discoideum cDNA clone:ddv16m12, 5' ... 32 8.3 3 (AC171655) Bos taurus clone CH240-164H16, WORKING DRAFT SEQU... 34 8.4 10 (AF452048) Pyrocoelia rufa mitochondrion, complete genome. 36 8.6 4 (AC166687) Bos taurus clone CH240-178B15, WORKING DRAFT SEQU... 36 8.6 8 (AP006650) Lotus japonicus genomic DNA, chromosome 6, clone:... 32 8.8 2 (AC115581) Dictyostelium discoideum chromosome 2 map complem... 38 9.1 5 (AC102970) Rattus norvegicus clone CH230-25L13, *** SEQUENCI... 34 9.2 12 (CU855598) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 9.4 9 (AC178102) Strongylocentrotus purpuratus clone R3-3073B8, WO... 34 9.5 10 (AM425207) Vitis vinifera contig VV78X148503.5, whole genome... 32 9.5 2 (AM427569) Vitis vinifera contig VV78X197701.2, whole genome... 32 9.6 2
>(AY593970) Dictyostelium discoideum copine B (cpnB) mRNA, complete cds. Length = 1593
Score = 2167 bits (1093), Expect(2) = 0.0 Identities = 1096/1097 (99%) Strand = Plus / Plus
Query: 40 atgacaacaccaattagtttaagtaaacccagagtagaattgagatttaaatgttcacat 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atgacaacaccaattagtttaagtaaacccagagtagaattgagatttaaatgttcacat 60
Query: 100 ttaaagaatttggatatttgtagtaaatcagatccattgattatggtttttgacaaaaga 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttaaagaatttggatatttgtagtaaatcagatccattgattatggtttttgacaaaaga 120
Query: 160 ggtgaacatggtgaatcaatatttgtaggacaaactgaaaaaattaacaataatttaaat 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggtgaacatggtgaatcaatatttgtaggacaaactgaaaaaattaacaataatttaaat 180
Query: 220 ccagaatttaaaaaatcagttattattgattatcattttgaaaatattcaaaatcttagt 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccagaatttaaaaaatcagttattattgattatcattttgaaaatattcaaaatcttagt 240
Query: 280 tttattgttgttgatattgataaagaaattaaaagagttggtgatttagaaggtaatgat 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tttattgttgttgatattgataaagaaattaaaagagttggtgatttagaaggtaatgat 300
Query: 340 attattggtcaatatacaacaacattaggtaatattatatcaaaaccaaataaaaaagtt 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 attattggtcaatatacaacaacattaggtaatattatatcaaaaccaaataaaaaagtt 360
Query: 400 attagcgaaattaaacataaaggtaaagaaacaggtgttattgagataacagcagaagaa 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 attagcgaaattaaacataaaggtaaagaaacaggtgttattgagataacagcagaagaa 420
Query: 460 attcgtgaaactggtcataactttttatttaaaattaatggtacaaaattggataaaaaa 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 attcgtgaaactggtcataactttttatttaaaattaatggtacaaaattggataaaaaa 480
Query: 520 gatttatttacaagtgacccatattttaagatttataaaacctcatcaagtggtaatgta 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 gatttatttacaagtgacccatattttaagatttataaaacctcatcaagtggtaatgta 540
Query: 580 ttggtttatcaaagtgttgtaattaagaatacattaaatccaaattatgaaccagtgatg 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 ttggtttatcaaagtgttgtaattaagaatacattaaatccaaattatgaaccagtgatg 600
Query: 640 atgaaattagaggaattaaataatggtgatatgtttagagaattggtatttgaattttgg 699 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 atgaaattagaggaattaaataatggtgatatgtttagagaattggtatttgaattttgg 660
Query: 700 gatcatgattcagttggtgagcatgatttcattggattattcacaaccaatgccgataca 759 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 gatcatgattcagttggtgagcatgatttcattggattattcacaaccaatgccgataca 720
Query: 760 gttttaaaaggtatcactagagaattcccgttaatcaatgcaaagaaagcagctaaaaaa 819 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 gttttaaaaggtatcactagagaattcccgttaatcaatgcaaagaaagcagctaaaaaa 780
Query: 820 tcaggttcctataagaattctggtgtaataacatttacagattgtagattagttggacaa 879 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 tcaggttcctataagaattctggtgtaataacatttacagattgtagattagttggacaa 840
Query: 880 ccaacttttatagattacttatcaggtggttgtgaaattaatttaatggttgcaattgat 939 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 ccaacttttatagattacttatcaggtggttgtgaaattaatttaatggttgcaattgat 900
Query: 940 tgtactgcaagtaatggttcaccatcaacttcaacttcattacattatcacacaccaagc 999 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 tgtactgcaagtaatggttcaccatcaacttcaacttcattacattatcacacaccaagc 960
Query: 1000 catccaagccaatatgcaaaatcaatcttttcagttggttcagtattggcaccatatgat 1059 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 catccaagccaatatgcaaaatcaatcttttcagttggttcagtattggcaccatatgat 1020
Query: 1060 tctgatggaaatattgaggtgttgggttttggtggtattcataggggtagtacaagtcat 1119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 tctgatggaaatattgaggtgttgggttttggtggtattcataggggtagtacaagtcat 1080
Query: 1120 tgtttccaattgggttc 1136 ||||||||||| ||||| Sbjct: 1081 tgtttccaatttggttc 1097
Score = 969 bits (489), Expect(2) = 0.0 Identities = 489/489 (100%) Strand = Plus / Plus
Query: 1144 gaagtacgtggtgttgagggtgttttattaacttatggtgaagttataccatcaatgtca 1203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1105 gaagtacgtggtgttgagggtgttttattaacttatggtgaagttataccatcaatgtca 1164
Query: 1204 ttatcttatccaaccaatttcaaagatatcatttcttacgctgcaaagaaatcattggat 1263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1165 ttatcttatccaaccaatttcaaagatatcatttcttacgctgcaaagaaatcattggat 1224
Query: 1264 ggtgttacttcaaaatctcaaaaatatactatactcttaattttaaccgatggtgaaatc 1323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1225 ggtgttacttcaaaatctcaaaaatatactatactcttaattttaaccgatggtgaaatc 1284
Query: 1324 tctgatatgaatgaaacagttcatgaaattgttaaggcttcaaaacaatcacctctctct 1383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1285 tctgatatgaatgaaacagttcatgaaattgttaaggcttcaaaacaatcacctctctct 1344
Query: 1384 atagttatcattggtattggtgaagctacattcgataatatgaatagattggatggtgat 1443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1345 atagttatcattggtattggtgaagctacattcgataatatgaatagattggatggtgat 1404
Query: 1444 gatggtaattctttaactgattcttcaggtcaaactgcaactcgtgatatcgttcaattc 1503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1405 gatggtaattctttaactgattcttcaggtcaaactgcaactcgtgatatcgttcaattc 1464
Query: 1504 gtaccattcaataatttctctgcaaatcctgaagctttagccactgaaacacttcgtgaa 1563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1465 gtaccattcaataatttctctgcaaatcctgaagctttagccactgaaacacttcgtgaa 1524
Query: 1564 atacctcaacaattacttggttttatgaaccaaaataattatttaccaatgagtcataga 1623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1525 atacctcaacaattacttggttttatgaaccaaaataattatttaccaatgagtcataga 1584
Query: 1624 ttaaaataa 1632 ||||||||| Sbjct: 1585 ttaaaataa 1593
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 102105510 Number of Hits to DB: 2,358,893,955 Number of extensions: 151766307 Number of successful extensions: 14480553 Number of sequences better than 10.0: 263 Length of query: 1655 Length of database: 101,790,757,118 Length adjustment: 24 Effective length of query: 1631 Effective length of database: 99,340,224,878 Effective search space: 162023906776018 Effective search space used: 162023906776018 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 7.27 |
Homology vs Protein |
Query= Contig-U03274-1 (Contig-U03274-1Q) /CSM_Contig/Contig-U03274-1Q.Seq.d (1655 letters)
Database: nrp_A 3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
(Q7YXU4) RecName: Full=Copine-A; &AY332759_1(AY332759|pid:none) 395 e-108 (Q8BT60) RecName: Full=Copine-3; AltName: Full=Copine III; &AL6... 351 4e-95 AK220348_1(AK220348|pid:none) Mus musculus mRNA for mKIAA0636 pr... 351 4e-95 BC142290_1(BC142290|pid:none) Bos taurus copine III, mRNA (cDNA ... 348 3e-94 AK146324_1(AK146324|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 346 1e-93 AK292912_1(AK292912|pid:none) Homo sapiens cDNA FLJ77305 complet... 343 8e-93 BC151889_1(BC151889|pid:none) Danio rerio copine I, mRNA (cDNA c... 343 8e-93 AY890887_1(AY890887|pid:none) Synthetic construct Homo sapiens c... 343 1e-92 (O75131) RecName: Full=Copine-3; AltName: Full=Copine III; &AB3... 343 1e-92 AB014536_1(AB014536|pid:none) Homo sapiens mRNA for KIAA0636 pro... 343 1e-92 BC036242_1(BC036242|pid:none) Homo sapiens copine III, mRNA (cDN... 340 9e-92 AY892987_1(AY892987|pid:none) Synthetic construct Homo sapiens c... 340 9e-92 BC045408_1(BC045408|pid:none) Danio rerio copine III, mRNA (cDNA... 339 2e-91 BC106238_1(BC106238|pid:none) Xenopus laevis hypothetical LOC495... 336 2e-90 BC080879_1(BC080879|pid:none) Xenopus tropicalis cpne3 protein, ... 336 2e-90 BC054636_1(BC054636|pid:none) Danio rerio zgc:64194, mRNA (cDNA ... 330 1e-88 BC050240_1(BC050240|pid:none) Danio rerio copine I, mRNA (cDNA c... 330 1e-88 BC022128_1(BC022128|pid:none) Mus musculus copine II, mRNA (cDNA... 327 8e-88 BC096510_1(BC096510|pid:none) Xenopus tropicalis hypothetical pr... 326 2e-87 AL928881_1(AL928881|pid:none) Zebrafish DNA sequence from clone ... 325 4e-87 AK292269_1(AK292269|pid:none) Homo sapiens cDNA FLJ77640 complet... 324 5e-87 (Q96FN4) RecName: Full=Copine-2; AltName: Full=Copine II; &AB46... 324 5e-87 BC061671_1(BC061671|pid:none) Xenopus laevis copine III, mRNA (c... 324 7e-87 (P59108) RecName: Full=Copine-2; AltName: Full=Copine II; &BC03... 323 1e-86 BC085079_1(BC085079|pid:none) Xenopus laevis hypothetical LOC495... 322 2e-86 AB463543_1(AB463543|pid:none) Synthetic construct DNA, clone: pF... 321 4e-86 AB046819_1(AB046819|pid:none) Homo sapiens mRNA for KIAA1599 pro... 320 7e-86 BX927411_3(BX927411|pid:none) Zebrafish DNA sequence from clone ... 318 5e-85 BC136053_1(BC136053|pid:none) Xenopus tropicalis copine V, mRNA ... 316 2e-84 (Q9DC53) RecName: Full=Copine-8; AltName: Full=Copine VIII; 313 9e-84 (Q86YQ8) RecName: Full=Copine-8; AltName: Full=Copine VIII; &BC... 313 1e-83 BC168840_1(BC168840|pid:none) Rattus norvegicus copine VIII, mRN... 313 1e-83 AY177785_1(AY177785|pid:none) Homo sapiens copine VIII (CPEVIII)... 313 2e-83 FJ436394_1(FJ436394|pid:none) Sus scrofa copine I (CPNE1) mRNA, ... 310 1e-82 AY892906_1(AY892906|pid:none) Synthetic construct Homo sapiens c... 310 1e-82 (Q96A23) RecName: Full=Copine-4; AltName: Full=Copine IV; AltNam... 310 1e-82 AK295557_1(AK295557|pid:none) Homo sapiens cDNA FLJ56085 complet... 309 2e-82 (Q8C166) RecName: Full=Copine-1; AltName: Full=Copine I; &AK028... 308 3e-82 BC123845_1(BC123845|pid:none) Bos taurus copine I, mRNA (cDNA cl... 307 7e-82 FJ958358_1(FJ958358|pid:none) Ovis aries copine I (CPNE1) mRNA, ... 307 7e-82 AK017651_1(AK017651|pid:none) Mus musculus 8 days embryo whole b... 306 2e-81 AL109827_5(AL109827|pid:none) Human DNA sequence from clone RP1-... 305 4e-81 AY891920_1(AY891920|pid:none) Synthetic construct Homo sapiens c... 305 4e-81 (Q99829) RecName: Full=Copine-1; AltName: Full=Copine I; &AL109... 305 4e-81 (Q2KHY1) RecName: Full=Copine-6; &BC112841_1(BC112841|pid:none) 300 1e-79 (Q9Z140) RecName: Full=Copine-6; AltName: Full=Copine VI; AltNam... 299 2e-79 (O95741) RecName: Full=Copine-6; AltName: Full=Copine VI; AltNam... 298 4e-79 (Q5R4W6) RecName: Full=Copine-6; AltName: Full=Copine VI; &CR86... 297 9e-79 BC018046_1(BC018046|pid:none) Homo sapiens copine VI (neuronal),... 297 9e-79 AM502246_125(AM502246|pid:none) Leishmania infantum chromosome 28. 296 1e-78 AM494965_129(AM494965|pid:none) Leishmania braziliensis chromoso... 296 1e-78 AK293655_1(AK293655|pid:none) Homo sapiens cDNA FLJ55997 complet... 296 2e-78 AY892955_1(AY892955|pid:none) Synthetic construct Homo sapiens c... 295 3e-78 AK222675_1(AK222675|pid:none) Homo sapiens mRNA for copine 6 var... 295 4e-78 Z82285_1(Z82285|pid:none) Caenorhabditis elegans Cosmid T28F3, c... 294 7e-78 T24855(T24855)hypothetical protein T12A7.1 - Caenorhabditis eleg... 291 6e-77 Z73911_1(Z73911|pid:none) Caenorhabditis elegans Cosmid T12A7, c... 291 6e-77 (Q8IYJ1) RecName: Full=Copine-9; AltName: Full=Copine IX; &BC03... 290 1e-76 (Q9XUB9) RecName: Full=Uncharacterized protein T28F3.1; &T25425... 286 2e-75 BC051994_1(BC051994|pid:none) Mus musculus copine VI, mRNA (cDNA... 284 8e-75 AY741136_1(AY741136|pid:none) Arabidopsis thaliana BON3 (BON3) m... 280 1e-73 AM483321_7(AM483321|pid:none) Vitis vinifera contig VV79X000700.... 279 2e-73 AL163912_1(AL163912|pid:none) Arabidopsis thaliana DNA chromosom... 271 4e-71 EF676600_1(EF676600|pid:none) Picea sitchensis clone WS02743_P13... 268 4e-70 (Q9UBL6) RecName: Full=Copine-7; AltName: Full=Copine VII; &AJ1... 266 2e-69 AB022212_2(AB022212|pid:none) Arabidopsis thaliana genomic DNA, ... 265 3e-69 AF332058_1(AF332058|pid:none) Mus musculus strain ILS copine 1 p... 259 2e-67 AF332057_1(AF332057|pid:none) Mus musculus strain ISS copine 1 p... 256 2e-66 AK120851_1(AK120851|pid:none) Oryza sativa Japonica Group cDNA c... 254 9e-66 AB168916_1(AB168916|pid:none) Macaca fascicularis testis cDNA, c... 253 2e-65 BC017626_1(BC017626|pid:none) Mus musculus copine VIII, mRNA (cD... 251 4e-65 AC119289_13(AC119289|pid:none) Oryza sativa (japonica cultivar-g... 245 3e-63 EU953104_1(EU953104|pid:none) Zea mays clone 1382955 copine-3 mR... 245 4e-63 BT064766_1(BT064766|pid:none) Zea mays full-length cDNA clone ZM... 243 1e-62 AL833786_22(AL833786|pid:none) Mouse DNA sequence from clone RP2... 243 2e-62 AK220288_1(AK220288|pid:none) Mus musculus mRNA for mKIAA0765 sp... 243 2e-62 AB170779_1(AB170779|pid:none) Macaca fascicularis brain cDNA clo... 241 4e-62 AK125195_1(AK125195|pid:none) Homo sapiens cDNA FLJ43205 fis, cl... 239 2e-61 AL109827_6(AL109827|pid:none) Human DNA sequence from clone RP1-... 237 1e-60 AM477282_1(AM477282|pid:none) Vitis vinifera contig VV78X135065.... 220 1e-55 AL833786_24(AL833786|pid:none) Mouse DNA sequence from clone RP2... 210 1e-52 AL109827_8(AL109827|pid:none) Human DNA sequence from clone RP1-... 207 9e-52 AC155882_18(AC155882|pid:none) Medicago truncatula chromosome 7 ... 188 4e-46 AL109827_9(AL109827|pid:none) Human DNA sequence from clone RP1-... 175 5e-42 AL109827_10(AL109827|pid:none) Human DNA sequence from clone RP1... 169 3e-40 AM457183_1(AM457183|pid:none) Vitis vinifera contig VV78X023262.... 158 5e-37 BT084547_1(BT084547|pid:none) Zea mays full-length cDNA clone ZM... 154 9e-36 BC007017_1(BC007017|pid:none) Homo sapiens copine III, mRNA (cDN... 153 2e-35 BC135526_1(BC135526|pid:none) Xenopus tropicalis hypothetical pr... 151 6e-35 BC115140_1(BC115140|pid:none) Danio rerio similar to copine III,... 147 9e-34 AK010227_1(AK010227|pid:none) Mus musculus adult male tongue cDN... 144 1e-32 BC115110_1(BC115110|pid:none) Danio rerio im:7143923, mRNA (cDNA... 139 4e-31 AK098593_1(AK098593|pid:none) Homo sapiens cDNA FLJ25727 fis, cl... 136 3e-30 AK094998_1(AK094998|pid:none) Homo sapiens cDNA FLJ37679 fis, cl... 128 7e-28 AL109827_12(AL109827|pid:none) Human DNA sequence from clone RP1... 120 1e-25 AF314092_1(AF314092|pid:none) Homo sapiens copine I (CPNE1) mRNA... 114 1e-23 AB171288_1(AB171288|pid:none) Macaca fascicularis brain cDNA clo... 111 7e-23 AL833786_26(AL833786|pid:none) Mouse DNA sequence from clone RP2... 110 2e-22 EF214878_1(EF214878|pid:none) Callithrix jacchus clone M12-45.3_... 108 6e-22 AC115607_18(AC115607|pid:none) Dictyostelium discoideum chromoso... 106 2e-21 AK079192_1(AK079192|pid:none) Mus musculus adult male urinary bl... 105 4e-21 AL109827_11(AL109827|pid:none) Human DNA sequence from clone RP1... 105 6e-21 AL109827_13(AL109827|pid:none) Human DNA sequence from clone RP1... 103 1e-20 AL109827_14(AL109827|pid:none) Human DNA sequence from clone RP1... 103 2e-20 BX005012_1(BX005012|pid:none) Zebrafish DNA sequence from clone ... 101 9e-20 U21317_10(U21317|pid:none) Caenorhabditis elegans cosmid B0495, ... 97 2e-18 U21317_11(U21317|pid:none) Caenorhabditis elegans cosmid B0495, ... 97 2e-18 (Q09219) RecName: Full=Putative protein tag-178; &H88216(H88216) 97 2e-18 AL109827_4(AL109827|pid:none) Human DNA sequence from clone RP1-... 96 3e-18 AL683894_3(AL683894|pid:none) Mouse DNA sequence from clone RP23... 96 5e-18 T29043(T29043)hypothetical protein B0228.2 - Caenorhabditis eleg... 92 4e-17 (Q09221) RecName: Full=Putative protein tag-308; &U23168_1(U231... 92 4e-17 U23168_5(U23168|pid:none) Caenorhabditis elegans cosmid B0228, c... 92 4e-17 AL833786_27(AL833786|pid:none) Mouse DNA sequence from clone RP2... 91 2e-16 AK317211_1(AK317211|pid:none) Arabidopsis thaliana AT5G14420 mRN... 91 2e-16 (Q9LY87) RecName: Full=E3 ubiquitin-protein ligase RGLG2; ... 91 2e-16 (Q9SS90) RecName: Full=E3 ubiquitin-protein ligase RGLG1; ... 89 4e-16 BT054868_1(BT054868|pid:none) Zea mays full-length cDNA clone ZM... 89 5e-16 DQ646522_1(DQ646522|pid:none) Oryza sativa (japonica cultivar-gr... 87 2e-15 BT054379_1(BT054379|pid:none) Zea mays full-length cDNA clone ZM... 87 2e-15 AY775334_1(AY775334|pid:none) Capsicum annuum RING-finger protei... 86 3e-15 AF466200_15(AF466200|pid:none) Sorghum bicolor putative protein ... 86 3e-15 AY087355_1(AY087355|pid:none) Arabidopsis thaliana clone 34552 m... 86 5e-15 AM451478_2(AM451478|pid:none) Vitis vinifera contig VV78X091163.... 86 5e-15 FJ032633_4(FJ032633|pid:none) Oryza alta clone a0036L17 charged ... 85 9e-15 AL109827_15(AL109827|pid:none) Human DNA sequence from clone RP1... 85 9e-15 AP004279_15(AP004279|pid:none) Oryza sativa Japonica Group genom... 84 2e-14 AK067750_1(AK067750|pid:none) Oryza sativa Japonica Group cDNA c... 84 2e-14 AB019227_6(AB019227|pid:none) Arabidopsis thaliana genomic DNA, ... 84 2e-14 FJ032625_11(FJ032625|pid:none) Oryza nivara clone a0074E19 SEC14... 84 2e-14 AK126138_1(AK126138|pid:none) Homo sapiens cDNA FLJ44150 fis, cl... 84 2e-14 EF085171_1(EF085171|pid:none) Picea sitchensis clone WS0297_O07 ... 83 3e-14 AC007202_20(AC007202|pid:none) Arabidopsis thaliana chromosome 1... 82 4e-14 EF085051_1(EF085051|pid:none) Picea sitchensis clone WS0273_L17 ... 82 6e-14 BC028613_1(BC028613|pid:none) Homo sapiens copine IV, mRNA (cDNA... 79 5e-13 EU965348_1(EU965348|pid:none) Zea mays clone 285478 copine famil... 77 1e-12 AL109827_18(AL109827|pid:none) Human DNA sequence from clone RP1... 75 9e-12 AL109827_16(AL109827|pid:none) Human DNA sequence from clone RP1... 71 1e-10 BX470170_2(BX470170|pid:none) Zebrafish DNA sequence from clone ... 69 4e-10 AM466445_1(AM466445|pid:none) Vitis vinifera contig VV78X085544.... 65 7e-09 AK013407_1(AK013407|pid:none) Mus musculus 10, 11 days embryo wh... 63 3e-08 FN357619_21(FN357619|pid:none) Schistosoma mansoni genome sequen... 59 7e-07 CT009662_6(CT009662|pid:none) Mouse DNA sequence from clone CH29... 59 7e-07 AX971442_1(AX971442|pid:none) Sequence 2245 from Patent EP1104808. 59 7e-07 DQ267216_1(DQ267216|pid:none) Taeniopygia guttata synaptotagmin ... 56 4e-06 AC149129_22(AC149129|pid:none) Medicago truncatula chromosome 7 ... 55 6e-06 BC080438_1(BC080438|pid:none) Xenopus laevis MGC86555 protein, m... 53 3e-05 (P46096) RecName: Full=Synaptotagmin-1; AltName: Full=Synaptotag... 52 5e-05 (P21579) RecName: Full=Synaptotagmin-1; AltName: Full=Synaptotag... 52 5e-05 AC008113_7(AC008113|pid:none) Genomic sequence for Arabidopsis t... 52 5e-05 (P21707) RecName: Full=Synaptotagmin-1; AltName: Full=Synaptotag... 52 5e-05 (Q60HC0) RecName: Full=Synaptotagmin-1; AltName: Full=Synaptotag... 52 5e-05 AK164153_1(AK164153|pid:none) Mus musculus adult male hippocampu... 52 8e-05 EU332955_1(EU332955|pid:none) Picea abies putative copine I (COP... 51 1e-04 AP006170_21(AP006170|pid:none) Oryza sativa Japonica Group genom... 51 1e-04 CS667541_1(CS667541|pid:none) Sequence 3 from Patent WO200605585... 50 2e-04 CR859069_1(CR859069|pid:none) Pongo abelii mRNA; cDNA DKFZp459D1... 50 3e-04 (P24507) RecName: Full=Synaptotagmin-C; AltName: Full=Synaptic v... 49 7e-04 BC076166_1(BC076166|pid:none) Danio rerio synaptotagmin V, mRNA ... 48 0.001 AK312302_1(AK312302|pid:none) Homo sapiens cDNA, FLJ92607, highl... 48 0.001 U00051_15(U00051|pid:none) Caenorhabditis elegans cosmid F42G9, ... 48 0.001 (P63318) RecName: Full=Protein kinase C gamma type; Sho... 48 0.001 (P10829) RecName: Full=Protein kinase C gamma type; Sho... 47 0.002 BC152174_1(BC152174|pid:none) Danio rerio synaptotagmin V, mRNA ... 47 0.002 AK296434_1(AK296434|pid:none) Homo sapiens cDNA FLJ60619 complet... 47 0.002 AK296412_1(AK296412|pid:none) Homo sapiens cDNA FLJ54490 complet... 47 0.002 Z15114_1(Z15114|pid:none) H.sapiens mRNA for protein kinase C ga... 47 0.002 (P05129) RecName: Full=Protein kinase C gamma type; Sho... 47 0.002 BX511298_2(BX511298|pid:none) Zebrafish DNA sequence from clone ... 47 0.003 (Q9R0N5) RecName: Full=Synaptotagmin-5; AltName: Full=Synaptotag... 47 0.003 AC117075_8(AC117075|pid:none) Dictyostelium discoideum chromosom... 46 0.005 A55417(A55417;B39454) synaptotagmin II - mouse &AK036357_1(AK03... 45 0.008 (P46097) RecName: Full=Synaptotagmin-2; AltName: Full=Synaptotag... 45 0.008 (P29101) RecName: Full=Synaptotagmin-2; AltName: Full=Synaptotag... 45 0.008 AK220537_1(AK220537|pid:none) Mus musculus mRNA for mKIAA4194 pr... 45 0.008 DQ090951_1(DQ090951|pid:none) Homo sapiens synaptotagmin V mRNA,... 45 0.010 AK302958_1(AK302958|pid:none) Homo sapiens cDNA FLJ52648 complet... 44 0.013 (O00445) RecName: Full=Synaptotagmin-5; AltName: Full=Synaptotag... 44 0.013 BC046157_1(BC046157|pid:none) Homo sapiens synaptotagmin V, mRNA... 44 0.013 U03125_1(U03125|pid:none) Aplysia californica synaptotagmin, p65... 44 0.018 FN357432_3(FN357432|pid:none) Schistosoma mansoni genome sequenc... 44 0.023 PC6300(PC6300) synaptotagmin X - rat (fragment) &U85513_1(U8551... 43 0.030 BC065065_1(BC065065|pid:none) Mus musculus synaptotagmin VI, mRN... 43 0.030 (O08625) RecName: Full=Synaptotagmin-10; AltName: Full=Synaptota... 43 0.030 BC050760_1(BC050760|pid:none) Mus musculus synaptotagmin VI, mRN... 43 0.030 (Q5T7P8) RecName: Full=Synaptotagmin-6; AltName: Full=Synaptotag... 43 0.030 (Q62746) RecName: Full=Synaptotagmin-6; AltName: Full=Synaptotag... 43 0.030 BC099185_1(BC099185|pid:none) Rattus norvegicus synaptotagmin VI... 43 0.030 EF544397_1(EF544397|pid:none) Platynereis dumerilii synaptotagmi... 43 0.030 AB184961_1(AB184961|pid:none) Bombyx mori cPKC mRNA for conventi... 43 0.030 AK056448_1(AK056448|pid:none) Homo sapiens cDNA FLJ31886 fis, cl... 43 0.030 BC031067_1(BC031067|pid:none) Homo sapiens synaptotagmin III, mR... 43 0.039 AC116986_30(AC116986|pid:none) Dictyostelium discoideum chromoso... 43 0.039 (Q6XYQ8) RecName: Full=Synaptotagmin-10; AltName: Full=Synaptota... 43 0.039 AF086713_1(AF086713|pid:none) Homo sapiens rasGAP-activating-lik... 43 0.039 (Q5RCK6) RecName: Full=Synaptotagmin-10; AltName: Full=Synaptota... 43 0.039 Y13100_1(Y13100|pid:none) S.raphanus mRNA for serine/threonine p... 43 0.039 BC105660_1(BC105660|pid:none) Mus musculus synaptotagmin VII, mR... 42 0.051 AY325502_1(AY325502|pid:none) Aplysia californica synaptotagmin ... 42 0.051 AB208935_1(AB208935|pid:none) Homo sapiens mRNA for RasGAP-activ... 42 0.051 AJ577387_1(AJ577387|pid:none) Triticum aestivum partial mRNA for... 42 0.051 AF336854_1(AF336854|pid:none) Rattus norvegicus synaptotagmin VI... 42 0.051 AX405920_1(AX405920|pid:none) Sequence 335 from Patent WO0222660. 42 0.051 AB075901_1(AB075901|pid:none) Mus musculus mRNA for synaptotagmi... 42 0.051 AF336859_1(AF336859|pid:none) Rattus norvegicus synaptotagmin VI... 42 0.051 AB384786_1(AB384786|pid:none) Synthetic construct DNA, clone: pF... 42 0.051 AF336857_1(AF336857|pid:none) Rattus norvegicus synaptotagmin VI... 42 0.051 (O95294) RecName: Full=RasGAP-activating-like protein 1; &BC093... 42 0.051 BC143261_1(BC143261|pid:none) Homo sapiens RAS protein activator... 42 0.051 BC014420_1(BC014420|pid:none) Homo sapiens RAS protein activator... 42 0.051 (Q9R0N7) RecName: Full=Synaptotagmin-7; AltName: Full=Synaptotag... 42 0.051 (O43581) RecName: Full=Synaptotagmin-7; AltName: Full=Synaptotag... 42 0.051 BC095109_1(BC095109|pid:none) Danio rerio zgc:109988, mRNA (cDNA... 42 0.051 DQ186663_1(DQ186663|pid:none) Felis catus synaptotagmin I mRNA, ... 42 0.067 AK032541_1(AK032541|pid:none) Mus musculus adult male olfactory ... 42 0.067 FN313605_1(FN313605|pid:none) Schistosoma japonicum isolate Anhu... 42 0.067 BC028379_1(BC028379|pid:none) Homo sapiens synaptotagmin III, mR... 42 0.067 AX886266_1(AX886266|pid:none) Sequence 2129 from Patent EP1033401. 42 0.067 AB000893_1(AB000893|pid:none) Mus musculus mRNA for synaptotagmi... 42 0.087 AF484090_1(AF484090|pid:none) Lymnaea stagnalis synaptotagmin I ... 42 0.087 (O35681) RecName: Full=Synaptotagmin-3; AltName: Full=Synaptotag... 42 0.087 AF375464_1(AF375464|pid:none) Rattus norvegicus synaptotagmin 3 ... 42 0.087 FM213368_1(FM213368|pid:none) Arabidopsis thaliana mRNA for NTMC... 41 0.11 M22199_1(M22199|pid:none) Human protein kinase C alpha-polypepti... 41 0.15 AY093442_1(AY093442|pid:none) Sus scrofa protein kinase C alpha ... 41 0.15 (P10102) RecName: Full=Protein kinase C alpha type; Sho... 41 0.15 AB209475_1(AB209475|pid:none) Homo sapiens mRNA for protein kina... 41 0.15 AY893713_1(AY893713|pid:none) Synthetic construct Homo sapiens c... 41 0.15 CS098010_1(CS098010|pid:none) Sequence 7 from Patent WO200502762... 41 0.15 A41791_1(A41791|pid:none) Sequence 1 from Patent WO9429455. 41 0.15 (P17252) RecName: Full=Protein kinase C alpha type; Sho... 41 0.15 (P05696) RecName: Full=Protein kinase C alpha type; Sho... 41 0.15 (P40748) RecName: Full=Synaptotagmin-3; AltName: Full=Synaptotag... 40 0.19 D63797_1(D63797|pid:none) Loligo pealei mRNA for synaptotagmin, ... 40 0.19 CR861284_1(CR861284|pid:none) Pongo abelii mRNA; cDNA DKFZp459M0... 40 0.19 BX294190_2(BX294190|pid:none) Zebrafish DNA sequence from clone ... 40 0.25 BT062836_1(BT062836|pid:none) Zea mays full-length cDNA clone ZM... 40 0.25 (P04409) RecName: Full=Protein kinase C alpha type; Sho... 40 0.25 FN357896_7(FN357896|pid:none) Schistosoma mansoni genome sequenc... 40 0.25 BC080256_1(BC080256|pid:none) Danio rerio zgc:91875, mRNA (cDNA ... 40 0.25 CP001328_38(CP001328|pid:none) Micromonas sp. RCC299 chromosome ... 40 0.33 AB102952_1(AB102952|pid:none) Arabidopsis thaliana sytC mRNA for... 40 0.33 AY389918_1(AY389918|pid:none) Protopterus dolloi protein kinase ... 40 0.33 AY389917_1(AY389917|pid:none) Latimeria chalumnae protein kinase... 40 0.33 AC024869_3(AC024869|pid:none) Caenorhabditis elegans cosmid Y75B... 40 0.33 AY633609_1(AY633609|pid:none) Homo sapiens aging-associated gene... 40 0.33 CU210935_2(CU210935|pid:none) Mouse DNA sequence from clone DN-2... 40 0.33 AK089115_1(AK089115|pid:none) Mus musculus 10 days neonate olfac... 39 0.43 S58402(S58402) synaptotagmin V - rat (fragment) &U20108_1(U2010... 39 0.43 CU633438_842(CU633438|pid:none) Podospora anserina genomic DNA c... 39 0.43 (P20444) RecName: Full=Protein kinase C alpha type; Sho... 39 0.43 AJ005377_1(AJ005377|pid:none) Calliphora vicina cDNA encoding fo... 39 0.43 BC080147_1(BC080147|pid:none) Xenopus tropicalis sytl2 protein, ... 39 0.43 (Q925C0) RecName: Full=Synaptotagmin-9; AltName: Full=Synaptotag... 39 0.43 AB083478_1(AB083478|pid:none) Mus musculus Pclo mRNA for Piccolo... 39 0.57 (Q9QYX7) RecName: Full=Protein piccolo; AltName: Full=Aczonin; A... 39 0.57 Y19186_1(Y19186|pid:none) Mus musculus mRNA for aczonin, short s... 39 0.57 EU967899_1(EU967899|pid:none) Zea mays clone 306899 ZAC mRNA, co... 39 0.57 BC029605_1(BC029605|pid:none) Homo sapiens synaptotagmin IX, mRN... 39 0.57 AK164368_1(AK164368|pid:none) Mus musculus 12 days embryo spinal... 39 0.57 AB093247_1(AB093247|pid:none) Mus musculus mRNA for mKIAA0559 pr... 39 0.57 AL844505_233(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.57 (Q86SS6) RecName: Full=Synaptotagmin-9; AltName: Full=Synaptotag... 39 0.57 FN357393_61(FN357393|pid:none) Schistosoma mansoni genome sequen... 39 0.57 AY130430_1(AY130430|pid:none) Petromyzon marinus protein kinase ... 39 0.57 AL669897_3(AL669897|pid:none) Mouse DNA sequence from clone RP23... 39 0.74 BC005418_1(BC005418|pid:none) Mus musculus RAS protein activator... 39 0.74 (Q9JKS6) RecName: Full=Protein piccolo; AltName: Full=Aczonin; A... 39 0.74 BC158238_1(BC158238|pid:none) Xenopus tropicalis cDNA clone IMAG... 39 0.74 (P70610) RecName: Full=Double C2-like domain-containing protein ... 39 0.74 AE014296_3095(AE014296|pid:none) Drosophila melanogaster chromos... 39 0.74 (Q9Z268) RecName: Full=RasGAP-activating-like protein 1; &AF086... 39 0.74 (P70169) RecName: Full=Double C2-like domain-containing protein ... 39 0.74 EF469241_1(EF469241|pid:none) Cyclorana alboguttata synaptotagmi... 39 0.74 BC094518_1(BC094518|pid:none) Rattus norvegicus synaptotagmin XI... 39 0.74 AE014296_3098(AE014296|pid:none) Drosophila melanogaster chromos... 39 0.74 AE014296_3101(AE014296|pid:none) Drosophila melanogaster chromos... 39 0.74 FJ032640_1(FJ032640|pid:none) Oryza granulata clone a0047L22 ZAC... 39 0.74 AJ459419_1(AJ459419|pid:none) Takifugu rubripes cacng5 gene, prk... 39 0.74 AP004305_9(AP004305|pid:none) Oryza sativa Japonica Group genomi... 39 0.74 AY393849_1(AY393849|pid:none) Gallus gallus protein kinase C bet... 39 0.74 AF138789_1(AF138789|pid:none) Rattus norvegicus multidomain pres... 39 0.74 (Q9VVI3) RecName: Full=E3 ubiquitin-protein ligase Nedd-4; ... 39 0.74 (Q14184) RecName: Full=Double C2-like domain-containing protein ... 39 0.74 AE014297_1971(AE014297|pid:none) Drosophila melanogaster chromos... 38 0.97 AJ851529_1(AJ851529|pid:none) Gallus gallus mRNA for hypothetica... 38 0.97 BT025937_1(BT025937|pid:none) Drosophila melanogaster IP13955 fu... 38 0.97 AE014297_1970(AE014297|pid:none) Drosophila melanogaster chromos... 38 0.97 AE014297_1969(AE014297|pid:none) Drosophila melanogaster chromos... 38 0.97 AE014297_1975(AE014297|pid:none) Drosophila melanogaster chromos... 38 0.97 B37237(B37237)protein kinase C (EC 2.7.1.-) II - African clawed ... 38 0.97 AE014297_1973(AE014297|pid:none) Drosophila melanogaster chromos... 38 0.97 BC144115_1(BC144115|pid:none) Homo sapiens synaptotagmin-like 2,... 38 0.97 AB057760_1(AB057760|pid:none) Mus musculus slp2-a mRNA for synap... 38 1.3 AK173212_1(AK173212|pid:none) Mus musculus mRNA for mKIAA1597 pr... 38 1.3 S33318(S33318) synaptotagmin - longfin squid &X72386_1(X72386|p... 38 1.3 AE013599_2510(AE013599|pid:none) Drosophila melanogaster chromos... 38 1.3 BC168993_1(BC168993|pid:none) Rattus norvegicus synaptotagmin-li... 38 1.3 FJ032631_2(FJ032631|pid:none) Oryza officinalis clone a0134O03 s... 38 1.3 X05279_1(X05279|pid:none) Drosophila melanogaster PKC gene exon ... 38 1.3 CU179680_504(CU179680|pid:none) Mycoplasma agalactiae PG2 chromo... 38 1.3 AL445067_160(AL445067|pid:none) Thermoplasma acidophilum complet... 38 1.3 AP003616_3(AP003616|pid:none) Oryza sativa Japonica Group genomi... 38 1.3 A32545(A32545) protein kinase C (EC 2.7.1.-) - fruit fly (Drosop... 38 1.3 AE013599_2511(AE013599|pid:none) Drosophila melanogaster chromos... 38 1.3 CR861147_1(CR861147|pid:none) Pongo abelii mRNA; cDNA DKFZp459H1... 38 1.3 FJ032625_13(FJ032625|pid:none) Oryza nivara clone a0074E19 SEC14... 38 1.3 EU307653_1(EU307653|pid:none) Choristoneura fumiferana protein k... 37 1.6 BX469931_5(BX469931|pid:none) Zebrafish DNA sequence from clone ... 37 1.6 BX469931_6(BX469931|pid:none) Zebrafish DNA sequence from clone ... 37 1.6 CR522870_639(CR522870|pid:none) Desulfotalea psychrophila LSv54 ... 37 1.6 AC152752_8(AC152752|pid:none) Medicago truncatula clone mth2-89c... 37 2.2 AK131365_1(AK131365|pid:none) Homo sapiens cDNA FLJ16407 fis, cl... 37 2.2 CP000153_611(CP000153|pid:none) Sulfurimonas denitrificans DSM 1... 37 2.2 BC015540_1(BC015540|pid:none) Homo sapiens synaptotagmin-like 2,... 37 2.2 AL590734_25(AL590734|pid:none) Leishmania major strain Friedlin ... 37 2.2 AK298604_1(AK298604|pid:none) Homo sapiens cDNA FLJ57276 complet... 37 2.2 AK092121_1(AK092121|pid:none) Homo sapiens cDNA FLJ34802 fis, cl... 37 2.2 AB384619_1(AB384619|pid:none) Synthetic construct DNA, clone: pF... 37 2.2 BC136450_1(BC136450|pid:none) Homo sapiens synaptotagmin-like 2,... 37 2.2 AF038535_1(AF038535|pid:none) Homo sapiens synaptotagmin VII mRN... 37 2.2 AK296740_1(AK296740|pid:none) Homo sapiens cDNA FLJ58350 complet... 37 2.2 AB046817_1(AB046817|pid:none) Homo sapiens mRNA for KIAA1597 pro... 37 2.2 EF540864_1(EF540864|pid:none) Branchiostoma lanceolatum protein ... 37 2.2 (P13677) RecName: Full=Protein kinase C, eye isozyme; E... 37 2.2 AK296224_1(AK296224|pid:none) Homo sapiens cDNA FLJ58536 complet... 37 2.2 AF331039_1(AF331039|pid:none) Manduca sexta synaptotagmin mRNA, ... 37 2.2 BC134597_1(BC134597|pid:none) Bos taurus double C2-like domains,... 37 2.2 AK124754_1(AK124754|pid:none) Homo sapiens cDNA FLJ42764 fis, cl... 37 2.2 AF312605_1(AF312605|pid:none) Plasmodium vivax clone C20a thromb... 37 2.8 BC083779_1(BC083779|pid:none) Rattus norvegicus double C2, gamma... 37 2.8 K03485_1(K03485|pid:none) Rat protein kinase C type III mRNA, 5'... 37 2.8 BT070117_1(BT070117|pid:none) Zea mays full-length cDNA clone ZM... 37 2.8 EU515155_1(EU515155|pid:none) Homo sapiens dysferlin variant 2 (... 37 2.8 EU515158_1(EU515158|pid:none) Homo sapiens dysferlin variant 5 (... 37 2.8 DQ267935_1(DQ267935|pid:none) Homo sapiens dysferlin_v1 (DYSF) m... 37 2.8 AF312601_1(AF312601|pid:none) Plasmodium vivax clone A110b throm... 37 2.8 BC061104_1(BC061104|pid:none) Mus musculus double C2, gamma, mRN... 37 2.8 M19007_1(M19007|pid:none) Rat protein kinase C beta-1 (PKC beta-... 37 2.8 AF312604_1(AF312604|pid:none) Plasmodium vivax clone B67b thromb... 37 2.8 EU515166_1(EU515166|pid:none) Homo sapiens dysferlin variant V1_... 37 2.8 AF312627_1(AF312627|pid:none) Plasmodium vivax clone R46c thromb... 37 2.8 AF312615_1(AF312615|pid:none) Plasmodium vivax clone B106 thromb... 37 2.8 AJ007670_1(AJ007670|pid:none) Homo sapiens mRNA for LGMD2B prote... 37 2.8 AF312600_1(AF312600|pid:none) Plasmodium vivax clone A101b throm... 37 2.8 AF312610_1(AF312610|pid:none) Plasmodium vivax clone C20d thromb... 37 2.8 JC7398(JC7398)double C2 protein, gamma isoform - mouse 37 2.8 EU515164_1(EU515164|pid:none) Homo sapiens dysferlin variant V1_... 37 2.8 AC010147_1(AC010147|pid:none) Homo sapiens BAC clone RP11-356H17... 37 2.8 (Q0H395) RecName: Full=Dysferlin; AltName: Full=Dystrophy-associ... 37 2.8 EU515161_1(EU515161|pid:none) Homo sapiens dysferlin variant V1_... 37 2.8 AF312626_1(AF312626|pid:none) Plasmodium vivax clone R46b thromb... 37 2.8 EU515159_1(EU515159|pid:none) Homo sapiens dysferlin variant 6 (... 37 2.8 (P68403) RecName: Full=Protein kinase C beta type; Shor... 37 2.8 U64901_1(U64901|pid:none) Plasmodium vivax thrombospondin-relate... 37 2.8 (P68404) RecName: Full=Protein kinase C beta type; Shor... 37 2.8 EU515157_1(EU515157|pid:none) Homo sapiens dysferlin variant 4 (... 37 2.8 AK074104_1(AK074104|pid:none) Homo sapiens mRNA for FLJ00175 pro... 37 2.8 EU515163_1(EU515163|pid:none) Homo sapiens dysferlin variant V1_... 37 2.8 AF312597_1(AF312597|pid:none) Plasmodium vivax clone B87 thrombo... 37 2.8 AK024872_1(AK024872|pid:none) Homo sapiens cDNA: FLJ21219 fis, c... 37 2.8 PDBF(1A25)A MOL_ID: 1; MOLECULE: PROTEIN KINASE C (BETA); CHAIN:... 37 2.8 EU515156_1(EU515156|pid:none) Homo sapiens dysferlin variant 3 (... 37 2.8 KIRTC2(A00623;A05106;A38237;A38238;A43612) protein kinase C (EC ... 37 2.8 AF312614_1(AF312614|pid:none) Plasmodium vivax clone B178 thromb... 37 2.8 AP008957_4869(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 37 2.8 EU515162_1(EU515162|pid:none) Homo sapiens dysferlin variant V1_... 37 2.8 AF312599_1(AF312599|pid:none) Plasmodium vivax clone A101a throm... 37 2.8 BC149087_1(BC149087|pid:none) Bos taurus synaptotagmin-like 2, m... 37 2.8 (P05772) RecName: Full=Protein kinase C beta type; Shor... 37 2.8 CP000881_84(CP000881|pid:none) Hemiselmis andersenii chromosome ... 36 3.7 AM920436_1172(AM920436|pid:none) Penicillium chrysogenum Wiscons... 36 3.7 FN357909_6(FN357909|pid:none) Schistosoma mansoni genome sequenc... 36 3.7 AY337620_1(AY337620|pid:none) Schistosoma mansoni protein kinase... 36 3.7 AY130429_1(AY130429|pid:none) Myxine glutinosa protein kinase C ... 36 3.7 GQ229035_1(GQ229035|pid:none) Ptychodera flava synaptotagmin I m... 36 3.7 U29376_5(U29376|pid:none) Caenorhabditis elegans cosmid E01H11, ... 36 4.8 T15903(T15903)protein kinase C homolog - Caenorhabditis elegans 36 4.8 BC082628_1(BC082628|pid:none) Xenopus laevis hypothetical LOC494... 36 4.8 CP000021_910(CP000021|pid:none) Vibrio fischeri ES114 chromosome... 36 4.8 AK227322_1(AK227322|pid:none) Arabidopsis thaliana mRNA for CaLB... 36 4.8 BX897677_14(BX897677|pid:none) Neurospora crassa DNA linkage gro... 36 4.8 CP000595_245(CP000595|pid:none) Ostreococcus lucimarinus CCE9901... 36 4.8 AK296296_1(AK296296|pid:none) Homo sapiens cDNA FLJ52312 complet... 36 4.8 AC013483_28(AC013483|pid:none) Arabidopsis thaliana chromosome I... 36 4.8 (Q8L7A4) RecName: Full=Probable ADP-ribosylation factor GTPase-a... 36 4.8 AC002299_2(AC002299|pid:none) Homo sapiens Chromosome 16 BAC clo... 36 4.8 (Q9UJ30) RecName: Full=Protein kinase C beta type; Shor... 36 4.8 AM910994_431(AM910994|pid:none) Plasmodium knowlesi strain H chr... 36 4.8 BC036472_1(BC036472|pid:none) Homo sapiens protein kinase C, bet... 36 4.8 CR382130_963(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 35 6.3 AK131144_1(AK131144|pid:none) Mus musculus mRNA for mFLJ00175 pr... 35 6.3 (Q9R0Q1) RecName: Full=Synaptotagmin-like protein 4; AltName: Fu... 35 6.3 (Q46I97) RecName: Full=CTP synthase; EC=6.3.4.2; AltNam... 35 6.3 A37237(A37237)protein kinase C (EC 2.7.1.-) I - African clawed f... 35 6.3 (Q16974) RecName: Full=Calcium-dependent protein kinase C; ... 35 6.3 CR954246_625(CR954246|pid:none) Pseudoalteromonas haloplanktis s... 35 6.3 U82935_1(U82935|pid:none) Caenorhabditis elegans protein kinase ... 35 6.3 AC004082_1(AC004082|pid:none) Homo sapiens PAC clone RP5-897G10 ... 35 6.3 AK094110_1(AK094110|pid:none) Homo sapiens cDNA FLJ36791 fis, cl... 35 6.3 (Q96C24) RecName: Full=Synaptotagmin-like protein 4; AltName: Fu... 35 6.3 AJ242954_1(AJ242954|pid:none) Mus musculus partial mRNA for dysf... 35 6.3 (Q9Y6V0) RecName: Full=Protein piccolo; AltName: Full=Aczonin; 35 6.3 FN357619_23(FN357619|pid:none) Schistosoma mansoni genome sequen... 35 6.3 U82936_1(U82936|pid:none) Caenorhabditis elegans protein kinase ... 35 6.3 AF188290_1(AF188290|pid:none) Mus musculus dysferlin (Dysf) mRNA... 35 6.3 AP006618_1604(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 35 8.2 AM494968_96(AM494968|pid:none) Leishmania braziliensis chromosom... 35 8.2 AY029212_1(AY029212|pid:none) Cryptosporidium parvum NifS-like p... 35 8.2 BC055154_1(BC055154|pid:none) Danio rerio protein kinase C, beta... 35 8.2 U55856_4(U55856|pid:none) Caenorhabditis elegans cosmid F31E8, c... 35 8.2 BC108289_1(BC108289|pid:none) Homo sapiens piccolo (presynaptic ... 35 8.2 BC001304_1(BC001304|pid:none) Homo sapiens piccolo (presynaptic ... 35 8.2 CP000015_72(CP000015|pid:none) Borrelia garinii PBi plasmid lp54... 35 8.2 AB001389_1(AB001389|pid:none) Solanum lycopersicum mRNA for CLB1... 35 8.2 CP001133_1011(CP001133|pid:none) Vibrio fischeri MJ11 chromosome... 35 8.2 AM075208_12(AM075208|pid:none) Enterobacter sakazakii partial ge... 35 8.2 AY389920_1(AY389920|pid:none) Protopterus dolloi protein kinase ... 35 8.2 (Q8VHQ7) RecName: Full=Synaptotagmin-like protein 4; AltName: Fu... 35 8.2 FJ550353_1(FJ550353|pid:none) Daphnia magna synaptotagmin I isof... 35 8.2
>(Q7YXU4) RecName: Full=Copine-A; &AY332759_1(AY332759|pid:none) Length = 600
Score = 395 bits (1014), Expect = e-108 Identities = 235/524 (44%), Positives = 312/524 (59%), Gaps = 10/524 (1%) Frame = +1
Query: 70 RVELRFKCSHLKNLDICSKSDPLIMVFDKRGEHGESIFVGQTEKINNNLNPEFKKSVIID 249 +VELR KC + + D SKSDP V++K G+ +G+TE I N LNPEFK ++ID Sbjct: 9 KVELRIKCHKILDKDTLSKSDPRASVYEK-DRAGQFRLIGKTETIQNQLNPEFKTPIVID 67
Query: 250 YHFENIQNLSFIVVDIDKEIKRVGDLEGNDIIGQYTTTLGNIISKPNKKVISEIKHK-GK 426 Y FE IQ L F + D+DK D IG + TL +I+SKP + V ++ K GK Sbjct: 68 YRFEEIQVLKFEIHDVDKN--------DEDFIGDASCTLTSILSKPGQTVCLQLLTKSGK 119
Query: 427 ETGVIEITAEEIRETGHNFLFKINGTKLDKKDLFTS--DPYFKIYKTSSSGN--VLVYQS 594 G + + AEEI+ T F + G K DKKDLF + DPY I + S N V +Y+S Sbjct: 120 HAGSMTVIAEEIKNTLQTIKFNLIGKKFDKKDLFGAGCDPYLIISRKVPSTNTFVKIYES 179
Query: 595 VVIKNTLNPNYEPVMMKLEELNNGDMFRELVFEFWDHDSVGEHDFIGLFTTNADTVLKGI 774 V K TLNP + + MKLEEL GDM RE+ FEF+D D +G+HD+IG F TNA +L+ Sbjct: 180 QVQKGTLNPVFSGIEMKLEELCGGDMQREIKFEFYDWDRIGKHDYIGEFHTNAQELLQP- 238
Query: 775 TREFPLINXXXXXXXSGSYKNSGVITFTDCRLVGQPTFIDYLSGGCEINLMVAIDCTASN 954 + F +IN SG YKNSG ++ +D + + F++Y+ GGC++NL+V IDCTASN Sbjct: 239 NQAFNVINSHKQEKKSG-YKNSGTVSVSDAVIEREYNFLEYIMGGCQMNLIVGIDCTASN 297
Query: 955 GSPSTSTSLHYHTPSHPSQYAKSIFSVGSVLAPYDSDGNIEVLGFGGIHRGST--SHCFQ 1128 G + SLHY +QYA +I SVG+V+ PY + I V GFGGI G + SHCF Sbjct: 298 GDSNDPNSLHYKNAQGLNQYANAICSVGNVIVPYTTTPLIPVYGFGGIMPGQSEVSHCFP 357
Query: 1129 L---GSKKEVRGVEGVLLTYGEVIPSMSLSYPTNFKDIISYAAKKSLDGVTSKSQKYTIL 1299 + S GV GVL Y + I + L PT F +I+ AA+ + G + +QKYTIL Sbjct: 358 MTLNASNTLCCGVNGVLDCYYDNISKIQLHGPTYFAPLINMAARYASQGQSQSNQKYTIL 417
Query: 1300 LILTDGEISDMNETVHEIVKASKQSPLSIVIIGIGEATFDNMNRLDGDDGNSLTDSSGQT 1479 +I+TDGEI D + T+ IVK+S PLSI+I+G+G A F NMN LDGDD + S G Sbjct: 418 MIITDGEILDADNTIDAIVKSS-GLPLSIIIVGVGNANFTNMNILDGDD--AALQSGGVR 474
Query: 1480 ATRDIVQFVPFNNFSANPEALATETLREIPQQLLGFMNQNNYLP 1611 A RDIVQFV ++ P LA E LREIP Q L FM + + P Sbjct: 475 AERDIVQFVAMRDYLNRPNELAAEVLREIPTQFLSFMKKYKFRP 518
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3268448 Number of Hits to DB: 2,492,822,065 Number of extensions: 50189730 Number of successful extensions: 133783 Number of sequences better than 10.0: 420 Number of HSP's gapped: 132642 Number of HSP's successfully gapped: 469 Length of query: 551 Length of database: 1,061,185,681 Length adjustment: 134 Effective length of query: 417 Effective length of database: 623,213,649 Effective search space: 259880091633 Effective search space used: 259880091633 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
0 |
VH (FL, L) |
0 |
VF (FL, S) |
0 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
1 |
SS (DIR, S) |
1 |
SH (FL, L) |
0 |
SF (FL, S) |
0 |
CH (FL, L) |
0 |
CF (FL, S) |
1 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |