| Contig-U03273-1 |
| Contig ID |
Contig-U03273-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
573 |
| Chromosome number (1..6, M) |
3 |
| Chromosome length |
6358359 |
| Start point |
3308607 |
| End point |
3308034 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
1 |
| Number of EST |
1 |
| Link to clone list |
U03273 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6. 9 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 5.29 |
| Homology vs DNA |
Query= Contig-U03273-1 (Contig-U03273-1Q) /CSM_Contig/Contig-U03273-1Q.Seq.d
(573 letters)
Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ359661) Dictyostelium discoideum cDNA clone:ddc15g23, 5' ... 813 0.0 2
(EY432282) ZY088039 Aspergillus oryzae EST Library Aspergill... 42 0.011 2
(GE417472) 294500394 Nasonia vitripennis Adult Male Nasonia ... 50 0.012 2
(GE426317) 294516470 Nasonia vitripennis Adult Male Nasonia ... 50 0.013 2
(GE411282) 294480676 Nasonia vitripennis Adult Male Nasonia ... 50 0.013 2
(EF678539) Picea sitchensis clone WS02926_I21 unknown mRNA. 52 0.024 1
(ER614794) 1093016343053 Global-Ocean-Sampling_GS-36-01-01-2... 52 0.024 1
(ER348947) 1092345438667 Global-Ocean-Sampling_GS-34-01-01-1... 52 0.024 1
(ER344609) 1092344371261 Global-Ocean-Sampling_GS-34-01-01-1... 52 0.024 1
(DT636715) EST1151646 Normalized pine embryo library, Lib_D ... 52 0.024 1
(DR691008) EST1081094 Normalized pine embryo library, Lib_D ... 52 0.024 1
(EX408197) GQ03601.B7_L18 GQ036 - Shoot tip - Active growth ... 52 0.024 1
(GE442222) 294565259 Nasonia vitripennis Adult Female Nasoni... 48 0.046 2
(AC022451) Homo sapiens chromosome 5 clone XXp1-1200G4, LOW-... 40 0.059 2
(AC005196) Homo sapiens chromosome 5, BAC clone 44J17 (LBNL ... 40 0.061 2
(FE372357) CBNP3099.fwd CBNP_Daphnia_pulex_Chosen_One_Librar... 50 0.094 1
(CT573008) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.16 4
(ER432706) 1092963784801 Global-Ocean-Sampling_GS-35-01-01-1... 48 0.37 1
(EK583105) 1095522010722 Global-Ocean-Sampling_GS-32-01-01-1... 48 0.37 1
(EK582312) 1095521725266 Global-Ocean-Sampling_GS-32-01-01-1... 48 0.37 1
(EK451670) 1095467519927 Global-Ocean-Sampling_GS-32-01-01-1... 48 0.37 1
(EK451259) 1095467421631 Global-Ocean-Sampling_GS-32-01-01-1... 48 0.37 1
(EJ516451) 1092955095853 Global-Ocean-Sampling_GS-29-01-01-1... 48 0.37 1
(EJ516285) 1092955095277 Global-Ocean-Sampling_GS-29-01-01-1... 48 0.37 1
(EJ483634) 1095403485373 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.37 1
(EJ289984) 1095372000377 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.37 1
(CJ747705) Ipomoea nil cDNA clone:jmsf38b14, 5' end. 48 0.37 1
(GM729970) Sequence 6633 from Patent WO2008048614. 44 0.50 2
(GM725753) Sequence 2416 from Patent WO2008048614. 44 0.50 2
(EC758032) PPE00002476 Agencourt Biosciences Agen-0020 Non-n... 36 0.61 2
(GE374516) 292312705 Nasonia vitripennis Male Pupae Nasonia ... 44 0.64 2
(GE435319) 294560543 Nasonia vitripennis Adult Male Nasonia ... 44 0.65 2
(CU437325) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 32 0.80 3
(CU437513) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 32 0.84 3
(CU440296) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 32 0.85 3
(CU439717) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 32 0.87 3
(CU433808) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 32 0.87 3
(CU427730) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 32 0.90 3
(AC178269) Strongylocentrotus purpuratus clone R3-3093B21, W... 38 1.1 3
(AJ245479) Brassica napus subsp. napus Sll3, slk, srk, CePP,... 32 1.4 5
(AL928951) Zebrafish DNA sequence from clone CH211-67N3 in l... 46 1.5 1
(X79279) A.thaliana AtK-1 gene. 46 1.5 1
(AM455935) Vitis vinifera contig VV78X206236.3, whole genome... 46 1.5 1
(DD037696) ISOLATED HUMAN KINASE PROTEINS, NUCLEIC ACID MOLE... 46 1.5 1
(AX392829) Sequence 3 from Patent WO0216567. 46 1.5 1
(AR881719) Sequence 3 from patent US 7049119. 46 1.5 1
(AR534244) Sequence 3 from patent US 6733978. 46 1.5 1
(AR406008) Sequence 3 from patent US 6630337. 46 1.5 1
(AR232169) Sequence 3 from patent US 6455291. 46 1.5 1
(AC026097) Homo sapiens chromosome 5 clone RP11-732J8, WORKI... 46 1.5 1
(AC223358) Bos taurus clone CH240-421H5, WORKING DRAFT SEQUE... 46 1.5 1
(AC219897) Bos taurus clone CH240-318K19, WORKING DRAFT SEQU... 46 1.5 1
(AC169425) Bos taurus clone CH240-202N8, WORKING DRAFT SEQUE... 46 1.5 1
(AC163469) Bos taurus clone CH240-131A9, WORKING DRAFT SEQUE... 46 1.5 1
(EJ990299) 1093023042685 Global-Ocean-Sampling_GS-30-02-01-1... 46 1.5 1
(EJ839511) 1093017822509 Global-Ocean-Sampling_GS-30-02-01-1... 46 1.5 1
(EJ500995) 1095403632987 Global-Ocean-Sampling_GS-28-01-01-1... 46 1.5 1
(DX540114) GH_MBb0083L16r GH_MBb Gossypium hirsutum genomic ... 46 1.5 1
(CU296445) Equus caballus GSS, BAC clone CH241-463K13, SP6 e... 46 1.5 1
(CC486963) CH240_318K19.T7 CHORI-240 Bos taurus genomic clon... 46 1.5 1
(BX228822) Danio rerio genomic clone DKEY-244H20, genomic su... 46 1.5 1
(AJ616402) Trichostrongylus vitrinus EST, clone Tvf09_H06. 46 1.5 1
(BQ433225) AGENCOURT_7763268 NIH_MGC_92 Homo sapiens cDNA cl... 46 1.5 1
(FD973618) RR2H374TF RR2(MS) Raphanus raphanistrum subsp. ra... 46 1.5 1
(AC147346) Xenopus (Silurana) tropicalis clone CH216-105M9, ... 42 1.8 2
(AM449364) Vitis vinifera contig VV78X184763.4, whole genome... 44 2.2 2
(AC166285) Medicago truncatula clone mth2-61n16, WORKING DRA... 38 2.2 3
(GE416052) 294496974 Nasonia vitripennis Adult Male Nasonia ... 42 2.5 2
(EJ697332) 1092956023131 Global-Ocean-Sampling_GS-30-02-01-1... 40 2.6 2
(ET090993) QM0AAA16AG07RM1 CCL1 Citrus clementina genomic cl... 42 2.7 2
(AC129283) Rattus norvegicus clone CH230-6I17, *** SEQUENCIN... 44 2.7 3
(EJ704169) 1092956046689 Global-Ocean-Sampling_GS-30-02-01-1... 40 2.8 2
(AC201641) Strongylocentrotus purpuratus clone R3-3056O18, W... 38 3.4 5
(EJ711371) 1092956077633 Global-Ocean-Sampling_GS-30-02-01-1... 34 3.8 2
(BV605372) S215P6495RA6.T0 Clara Pan troglodytes troglodytes... 34 3.8 2
(CR925814) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 3.9 6
(BF516125) UI-H-BW1-anx-f-08-0-UI.s1 NCI_CGAP_Sub7 Homo sapi... 32 3.9 2
(AC142213) Mus musculus BAC clone RP24-460K23 from chromosom... 34 4.5 4
(AC157940) Mus musculus BAC clone RP24-439N9 from chromosome... 34 4.5 4
(AF135405) Homo sapiens chromosome 21 clone PAC A1250 map 21... 36 5.1 3
(BX571790) Zebrafish DNA sequence from clone CH211-199M3 in ... 36 5.2 5
(CR352215) Zebrafish DNA sequence from clone CH211-235F1 in ... 44 5.8 1
(BX936320) Zebrafish DNA sequence from clone CH211-112L17 in... 44 5.8 1
(EZ015965) TSA: Acropora millepora SeqIndex20756, mRNA seque... 44 5.8 1
(AC165163) Mus musculus BAC clone RP23-146B12 from chromosom... 44 5.8 1
(AC134495) Rattus norvegicus BAC CH230-243A2 () complete se... 44 5.8 1
(AC116997) Mus musculus BAC clone RP23-8J15 from chromosome ... 44 5.8 1
(EU162608) Arabidopsis lyrata subsp. lyrata clone contig80 B... 44 5.8 1
(AP006135) Lotus japonicus genomic DNA, chromosome 1, clone:... 44 5.8 1
(AC216766) Populus trichocarpa clone POP029-O12, complete se... 44 5.8 1
(AC210342) Populus trichocarpa clone POP091-B06, complete se... 44 5.8 1
(CS374614) Sequence 717 from Patent WO2006034879. 44 5.8 1
(CS374342) Sequence 445 from Patent WO2006034879. 44 5.8 1
(AR378428) Sequence 3434 from patent US 6605709. 44 5.8 1
(AM773548) Lama pacos germline IgHV region, Vh3-S1, Vh2-S1 a... 44 5.8 1
(AC197829) Canis familiaris, clone XX-139A14, complete seque... 44 5.8 1
(AC190108) Canis Familiaris chromosome 9, clone XX-415N7, co... 44 5.8 1
(AC206108) Saccoglossus kowalevskii BAC CUGI_SK_BA 001A23 (... 44 5.8 1
(AC114278) Homo sapiens chromosome 5 clone CTD-2154H5, compl... 44 5.8 1
(AC104111) Homo sapiens chromosome 5 clone RP11-176O14, comp... 44 5.8 1
(AC093677) Homo sapiens BAC clone RP11-629B11 from 4, comple... 44 5.8 1
(AC145286) Homo sapiens chromosome 16 clone RP11-1364H13, WO... 44 5.8 1
(AC119583) Rattus norvegicus clone CH230-48I4, *** SEQUENCIN... 44 5.8 1
(AC109381) Rattus norvegicus chromosome 18 clone CH230-114B2... 44 5.8 1
(AC106933) Rattus norvegicus clone CH230-75D13, WORKING DRAF... 44 5.8 1
(AC097621) Rattus norvegicus clone CH230-41D17, *** SEQUENCI... 44 5.8 1
(AP001194) Homo sapiens genomic DNA, chromosome 11q14 clone:... 44 5.8 1
(AC222692) Bos taurus clone CH240-441G24, WORKING DRAFT SEQU... 44 5.8 1
(AC216792) Gallus gallus chromosome Z clone CH261-96E14, WOR... 44 5.8 1
(AC183280) Bos taurus clone CH240-98P23, WORKING DRAFT SEQUE... 44 5.8 1
(AC169065) Bos taurus clone CH240-210P16, WORKING DRAFT SEQU... 44 5.8 1
(AC013573) Homo sapiens clone RP11-2G10, WORKING DRAFT SEQUE... 44 5.8 1
(AZ110169) RPCI-23-457E11.TJ RPCI-23 Mus musculus genomic cl... 44 5.8 1
(ER315522) 1092344138857 Global-Ocean-Sampling_GS-34-01-01-1... 44 5.8 1
(ER306810) 1092343758898 Global-Ocean-Sampling_GS-34-01-01-1... 44 5.8 1
(EK166028) 1095458052117 Global-Ocean-Sampling_GS-31-01-01-1... 44 5.8 1
(EJ984013) 1093022174387 Global-Ocean-Sampling_GS-30-02-01-1... 44 5.8 1
(EJ967769) 1093022056281 Global-Ocean-Sampling_GS-30-02-01-1... 44 5.8 1
(EJ954332) 1093018964856 Global-Ocean-Sampling_GS-30-02-01-1... 44 5.8 1
(EJ947472) 1093018921413 Global-Ocean-Sampling_GS-30-02-01-1... 44 5.8 1
(EJ583750) 1092961000377 Global-Ocean-Sampling_GS-29-01-01-1... 44 5.8 1
(EJ401536) 1093012057057 Global-Ocean-Sampling_GS-28-01-01-1... 44 5.8 1
(EJ156455) 1092344031608 Global-Ocean-Sampling_GS-27-01-01-1... 44 5.8 1
(EJ114207) 1092343258397 Global-Ocean-Sampling_GS-27-01-01-1... 44 5.8 1
(CZ455978) MCF733a08TF Human MCF7 breast cancer cell line li... 44 5.8 1
(CU954163) Brassica napus GSS, clone JBnB119C24, end read, p... 44 5.8 1
(CR256953) Forward strand read from insert in 5'HPRT inserti... 44 5.8 1
(BZ196134) CH230-416M19.TJ CHORI-230 Segment 2 Rattus norveg... 44 5.8 1
(BZ075195) lkf69g01.g1 B.oleracea002 Brassica oleracea genom... 44 5.8 1
(BH563555) BOGYF31TR BOGY Brassica oleracea genomic clone BO... 44 5.8 1
(AG444717) Mus musculus molossinus DNA, clone:MSMg01-327F06.... 44 5.8 1
(EC716629) MCE00001826 Malawimonas californiana Home made (N... 44 5.8 1
(DN199249) USDA-FP_135963 5th Instar Glassy-winged Sharpshoo... 44 5.8 1
(BG661775) kx06b10.y1 Parastrongyloides trichosuri IL SL1 TO... 44 5.8 1
(GO164996) CAGA41230.rev CAGA Alvinella pompejana Normalized... 44 5.8 1
(CP001337) Chloroflexus aggregans DSM 9485, complete genome. 44 5.8 1
(AM942759) Proteus mirabilis strain HI4320, complete genome. 44 5.8 1
(CU607040) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 5.8 4
(CU929532) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 6.2 2
(AC184424) Strongylocentrotus purpuratus clone R3-3078B9, WO... 38 6.6 2
(AC222257) Bos taurus clone CH240-413G23, WORKING DRAFT SEQU... 40 6.6 2
(AL161543) Arabidopsis thaliana DNA chromosome 4, contig fra... 36 6.8 4
(CU855990) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 7.3 4
(FF295423) 279306575 Pea aphid whole body normalized full le... 34 8.2 3
(AF268055) Candidatus Carsonella ruddii natural-host Glycasp... 40 8.3 2
(AE016831) Enterococcus faecalis V583 plasmid pTEF2, complet... 42 8.5 3
(AL653628) Xenopus tropicalis EST, clone TGas041l20 5'. 40 8.6 2
(EJ204362) 1092344328181 Global-Ocean-Sampling_GS-27-01-01-1... 34 8.7 2
(EJ994273) 1093023075297 Global-Ocean-Sampling_GS-30-02-01-1... 40 8.8 2
(DC185593) Xenopus (Silurana) tropicalis NBRP cDNA clone: st... 40 8.8 2
(AL629687) Xenopus tropicalis EST, clone TGas024k06 5'. 40 9.0 2
(ER338622) 1092344326053 Global-Ocean-Sampling_GS-34-01-01-1... 40 9.0 2
(FH387440) CHO_OF4760xl24f1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 9.1 2
(EJ776383) 1093004100673 Global-Ocean-Sampling_GS-30-02-01-1... 40 9.3 2
(EJ830553) 1093017579210 Global-Ocean-Sampling_GS-30-02-01-1... 40 9.4 2
(EJ609101) 1092962030134 Global-Ocean-Sampling_GS-29-01-01-1... 40 9.5 2
(FP015968) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 9.5 5
(AR547775) Sequence 2906 from patent US 6747137. 34 9.5 2
(EE264910) B07_B07sg2a14_pDNRf_521340 Myzus persicae, tobacc... 38 9.8 2
>(BJ359661) Dictyostelium discoideum cDNA clone:ddc15g23, 5' end,
single read.
Length = 574
Score = 813 bits (410), Expect(2) = 0.0
Identities = 410/410 (100%)
Strand = Plus / Plus
Query: 164 agaattttaggaattagatcatcaataccattaaataaaactttacaaccaaaagcacaa 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 agaattttaggaattagatcatcaataccattaaataaaactttacaaccaaaagcacaa 223
Query: 224 gcattggaacaaaaatatcaaaataaaattaatgtaaattcaattgctaatagtatttcg 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gcattggaacaaaaatatcaaaataaaattaatgtaaattcaattgctaatagtatttcg 283
Query: 284 agtaagagggtgattgatgatgattcacatagagcattaccaaattctgtacaaaattca 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 agtaagagggtgattgatgatgattcacatagagcattaccaaattctgtacaaaattca 343
Query: 344 attaaagagattaaaaagaaagatgataaacaaggtgtacgtattgtagataaagaggat 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 attaaagagattaaaaagaaagatgataaacaaggtgtacgtattgtagataaagaggat 403
Query: 404 agagcaaccactgagcaagtgttggatccacgtacacgtttaatgttatttaaaatgatt 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 agagcaaccactgagcaagtgttggatccacgtacacgtttaatgttatttaaaatgatt 463
Query: 464 aataagggtgcattctcagagattaatggttgtatctcaacgggtaaagaagccaatgtg 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aataagggtgcattctcagagattaatggttgtatctcaacgggtaaagaagccaatgtg 523
Query: 524 taccatgcattcacacccaatgaggaagaacgtgctgtaaaagtgtataa 573
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 taccatgcattcacacccaatgaggaagaacgtgctgtaaaagtgtataa 573
Score = 103 bits (52), Expect(2) = 0.0
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 27 ttcaaactttagaagtaccattaagaagaaatggtgatcttatagaattttc 78
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27 ttcaaactttagaagtaccattaagaagaaatggtgatcttatagaattttc 78
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 627,968,927
Number of extensions: 41081862
Number of successful extensions: 3496387
Number of sequences better than 10.0: 162
Length of query: 573
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 550
Effective length of database: 99,442,330,388
Effective search space: 54693281713400
Effective search space used: 54693281713400
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.27 |
| Homology vs Protein |
Query= Contig-U03273-1 (Contig-U03273-1Q) /CSM_Contig/Contig-U03273-1Q.Seq.d
(573 letters)
Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR388093_6(CR388093|pid:none) Zebrafish DNA sequence from clone ... 106 5e-22
AL138878_1(AL138878|pid:none) Human DNA sequence from clone RP11... 105 1e-21
AY335583_1(AY335583|pid:none) Synthetic construct Homo sapiens A... 105 1e-21
AL834277_1(AL834277|pid:none) Homo sapiens mRNA; cDNA DKFZp547L2... 105 1e-21
AK054568_1(AK054568|pid:none) Homo sapiens cDNA FLJ30006 fis, cl... 105 1e-21
(Q9BRS2) RecName: Full=Serine/threonine-protein kinase RIO1; ... 105 1e-21
BC089140_1(BC089140|pid:none) Xenopus laevis hypothetical protei... 104 1e-21
BC160775_1(BC160775|pid:none) Xenopus laevis hypothetical protei... 104 1e-21
(Q922Q2) RecName: Full=Serine/threonine-protein kinase RIO1; ... 100 5e-20
EF044030_1(EF044030|pid:none) Synthetic construct clone ATCC 106... 100 5e-20
BC079173_1(BC079173|pid:none) Rattus norvegicus RIO kinase 1 (ye... 99 1e-19
BT038292_1(BT038292|pid:none) Zea mays full-length cDNA clone ZM... 97 3e-19
BT069603_1(BT069603|pid:none) Zea mays full-length cDNA clone ZM... 97 3e-19
AY088156_1(AY088156|pid:none) Arabidopsis thaliana clone 42141 m... 95 2e-18
AK176351_1(AK176351|pid:none) Arabidopsis thaliana mRNA, complet... 95 2e-18
AC006585_8(AC006585|pid:none) Arabidopsis thaliana chromosome 2 ... 95 2e-18
AE014296_2121(AE014296|pid:none) Drosophila melanogaster chromos... 95 2e-18
AY062719_1(AY062719|pid:none) Arabidopsis thaliana SUDD-like pro... 95 2e-18
AB120324_1(AB120324|pid:none) Nicotiana tabacum NtRIO mRNA for R... 92 1e-17
AM920427_1283(AM920427|pid:none) Penicillium chrysogenum Wiscons... 89 1e-16
AF067624_6(AF067624|pid:none) Caenorhabditis elegans cosmid M01B... 87 2e-16
AF067624_5(AF067624|pid:none) Caenorhabditis elegans cosmid M01B... 87 2e-16
T33172(T33172)hypothetical protein M01B12.5 - Caenorhabditis ele... 87 2e-16
BT045996_1(BT045996|pid:none) Salmo salar clone ssal-rgf-538-310... 85 1e-15
AM494966_25(AM494966|pid:none) Leishmania braziliensis chromosom... 85 1e-15
AM502247_40(AM502247|pid:none) Leishmania infantum chromosome 29. 84 2e-15
AC093543_31(AC093543|pid:none) Trypanosoma brucei chromosome 3 c... 84 3e-15
CU928178_421(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 83 5e-15
AF013590_1(AF013590|pid:none) Emericella nidulans extragenic sup... 83 5e-15
FM992688_1010(FM992688|pid:none) Candida dubliniensis CD36 chrom... 82 8e-15
CR382139_643(CR382139|pid:none) Debaryomyces hansenii strain CBS... 82 1e-14
AM270009_9(AM270009|pid:none) Aspergillus niger contig An02c0140... 82 1e-14
BC077936_1(BC077936|pid:none) Xenopus laevis RIO kinase 3 (yeast... 79 1e-13
AY810901_1(AY810901|pid:none) Schistosoma japonicum SJCHGC04428 ... 79 1e-13
BC060398_1(BC060398|pid:none) Xenopus laevis hypothetical protei... 79 1e-13
BC075585_1(BC075585|pid:none) Xenopus tropicalis MGC89575 protei... 79 1e-13
CP000496_948(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 78 1e-13
BC077112_1(BC077112|pid:none) Danio rerio RIO kinase 3 (yeast), ... 77 3e-13
FN357334_5(FN357334|pid:none) Schistosoma mansoni genome sequenc... 76 7e-13
AB169383_1(AB169383|pid:none) Macaca fascicularis testis cDNA, c... 75 2e-12
CR858252_1(CR858252|pid:none) Pongo abelii mRNA; cDNA DKFZp469N1... 75 2e-12
AB169115_1(AB169115|pid:none) Macaca fascicularis testis cDNA, c... 75 2e-12
AK303938_1(AK303938|pid:none) Homo sapiens cDNA FLJ54233 complet... 75 2e-12
BC039729_1(BC039729|pid:none) Homo sapiens RIO kinase 3 (yeast),... 75 2e-12
(Q1RMT7) RecName: Full=Serine/threonine-protein kinase RIO3; ... 75 2e-12
AK147074_1(AK147074|pid:none) Mus musculus 17 days pregnant adul... 74 2e-12
AK134327_1(AK134327|pid:none) Mus musculus 13 days embryo male t... 74 2e-12
AK167309_1(AK167309|pid:none) Mus musculus 13 days pregnant adul... 74 2e-12
(Q9DBU3) RecName: Full=Serine/threonine-protein kinase RIO3; ... 74 2e-12
BX284753_9(BX284753|pid:none) Neurospora crassa DNA linkage grou... 71 2e-11
CU633900_15(CU633900|pid:none) Podospora anserina genomic DNA ch... 70 4e-11
AC123899_22(AC123899|pid:none) Medicago truncatula clone mth2-33... 70 5e-11
CU928170_670(CU928170|pid:none) Kluyveromyces thermotolerans str... 69 7e-11
X96739_1(X96739|pid:none) S.cerevisiae RIO1 gene. 69 9e-11
AE017356_177(AE017356|pid:none) Cryptococcus neoformans var. neo... 69 1e-10
AM114193_2910(AM114193|pid:none) Uncultured methanogenic archaeo... 60 4e-08
CP000099_1732(CP000099|pid:none) Methanosarcina barkeri str. Fus... 59 9e-08
A69001(A69001) conserved hypothetical protein MTH1005 - Methanob... 54 2e-06
(O28471) RecName: Full=RIO-type serine/threonine-protein kinase ... 54 3e-06
CR940347_344(CR940347|pid:none) Theileria annulata strain Ankara... 52 9e-06
AM910996_474(AM910996|pid:none) Plasmodium knowlesi strain H chr... 51 3e-05
AE014134_831(AE014134|pid:none) Drosophila melanogaster chromoso... 50 3e-05
CP001338_2651(CP001338|pid:none) Candidatus Methanosphaerula pal... 50 3e-05
CP001140_1084(CP001140|pid:none) Desulfurococcus kamchatkensis 1... 50 4e-05
CP000678_952(CP000678|pid:none) Methanobrevibacter smithii ATCC ... 50 4e-05
CP000780_2446(CP000780|pid:none) Candidatus Methanoregula boonei... 49 1e-04
AL590445_110(AL590445|pid:none) chromosome V of strain GB-M1 of ... 48 2e-04
CP000300_865(CP000300|pid:none) Methanococcoides burtonii DSM 62... 48 2e-04
CP000562_2485(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 48 2e-04
CP000505_509(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 47 3e-04
CP000575_1088(CP000575|pid:none) Staphylothermus marinus F1, com... 47 4e-04
CP000254_2383(CP000254|pid:none) Methanospirillum hungatei JF-1,... 46 6e-04
AM180088_2481(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 44 0.003
CP000866_1406(CP000866|pid:none) Nitrosopumilus maritimus SCM1, ... 44 0.003
CR936257_654(CR936257|pid:none) Natronomonas pharaonis DSM 2160 ... 43 0.007
AM774415_1779(AM774415|pid:none) Halobacterium salinarum complet... 41 0.020
CP001399_203(CP001399|pid:none) Sulfolobus islandicus L.S.2.15, ... 41 0.026
AE009439_514(AE009439|pid:none) Methanopyrus kandleri AV19, comp... 41 0.026
CP001400_170(CP001400|pid:none) Sulfolobus islandicus M.14.25, c... 41 0.026
CP001398_1424(CP001398|pid:none) Thermococcus gammatolerans EJ3,... 40 0.045
CP001365_2625(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 40 0.059
AJ248284_296(AJ248284|pid:none) Pyrococcus abyssi complete genom... 39 0.13
CP000682_652(CP000682|pid:none) Metallosphaera sedula DSM 5348, ... 38 0.17
AP006878_802(AP006878|pid:none) Thermococcus kodakarensis KOD1 D... 38 0.17
BA000001_1614(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, ... 38 0.22
CP000855_771(CP000855|pid:none) Thermococcus onnurineus NA1, com... 38 0.22
AE009950_1581(AE009950|pid:none) Pyrococcus furiosus DSM 3638, c... 36 0.85
CP001463_1090(CP001463|pid:none) Thermococcus sibiricus MM 739, ... 35 1.1
CR382133_463(CR382133|pid:none) Debaryomyces hansenii strain CBS... 35 1.9
CP000852_489(CP000852|pid:none) Caldivirga maquilingensis IC-167... 34 2.5
CP000423_557(CP000423|pid:none) Lactobacillus casei ATCC 334, co... 34 3.3
CP000742_1200(CP000742|pid:none) Methanococcus vannielii SB, com... 33 7.2
(A5WGH7) RecName: Full=Acetylglutamate kinase; EC=2.7.2... 33 7.2
FN313821_1(FN313821|pid:none) Schistosoma japonicum isolate Anhu... 33 7.2
(Q4FU68) RecName: Full=Acetylglutamate kinase; EC=2.7.2... 32 9.4
AE004437_1712(AE004437|pid:none) Halobacterium sp. NRC-1, comple... 32 9.4
CP000139_281(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, ... 32 9.4
>CR388093_6(CR388093|pid:none) Zebrafish DNA sequence from clone
CH211-279L9 in linkage group 2 Contains the gene for a
novel protein (zgc:152779), the bmi1b gene for B
lymphoma Mo-MLV insertion region 1b, the gene for a
novel protein similar to vertebrate
phosphatidylinositol-4-phosphate 5-kinase type II alpha
(PIP5K2A), the gene for a novel protein similar to
vertebrate nebulette (NEBL, zgc:113144), the riok1 gene
for RIO kinase 1 (yeast), a novel gene, the 3' end of a
novel gene and three CpG islands, complete sequence.
Length = 552
Score = 106 bits (264), Expect = 5e-22
Identities = 49/82 (59%), Positives = 64/82 (78%)
Frame = +2
Query: 326 NSVQNSIKEIKKKDDKQGVRIVDKEDRATTEQVLDPRTRLMLFKMINKGAFSEINGCIST 505
+SV N + ++K+ + R+ DK DRAT EQVLDPRTR++LFKM+++G FS+INGCIST
Sbjct: 125 DSVINKVTVMQKQREADTFRVKDKSDRATVEQVLDPRTRMILFKMLSRGVFSQINGCIST 184
Query: 506 GKEANVYHAFTPNEEERAVKVY 571
GKEANVYHA T E RA+K+Y
Sbjct: 185 GKEANVYHATTAKGESRAIKIY 206
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 666,046,903
Number of extensions: 10835925
Number of successful extensions: 27695
Number of sequences better than 10.0: 97
Number of HSP's gapped: 27681
Number of HSP's successfully gapped: 97
Length of query: 191
Length of database: 1,061,185,681
Length adjustment: 121
Effective length of query: 70
Effective length of database: 665,703,473
Effective search space: 46599243110
Effective search space used: 46599243110
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
1 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |