| Contig-U16187-1 |
| Contig ID |
Contig-U16187-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
875 |
| Chromosome number (1..6, M) |
1 |
| Chromosome length |
4919822 |
| Start point |
3779361 |
| End point |
3780236 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
3 |
| Number of EST |
4 |
| Link to clone list |
U16187 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 3.21 |
| Homology vs DNA |
Query= Contig-U16187-1 (Contig-U16187-1Q) /CSM_Contig/Contig-U16187-1Q.Seq.d
(885 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU264688) Dictyostelium discoideum vegetative cDNA clone:VS... 1005 0.0 2
(BJ436034) Dictyostelium discoideum cDNA clone:ddv29i13, 3' ... 856 0.0 3
(AR549502) Sequence 4633 from patent US 6747137. 137 9e-29 2
(BJ417143) Dictyostelium discoideum cDNA clone:ddv29i13, 5' ... 90 8e-27 2
(CN632251) taf15b06.y1 Hydra EST Darmstadt I Hydra magnipapi... 70 7e-23 3
(GE312967) OXBA-aaa37d06.g1 Oxytricha_pSMART_OXBA Sterkiella... 88 1e-21 2
(CF674585) tac61h04.y1 Hydra EST -IV Hydra magnipapillata cD... 62 2e-20 3
(DN246059) ACAE-aaa49d02.g1 Hydra EST UCI 5 Hydra magnipapil... 62 2e-20 3
(DR436932) ACAB-aaa55f06.g1 Hydra UCI6- barcoded EST's Hydra... 62 2e-20 3
(CF655266) tac87b08.y1 Hydra EST -IV Hydra magnipapillata cD... 62 2e-20 3
(CF656334) tac53b01.y1 Hydra EST -IV Hydra magnipapillata cD... 62 2e-20 3
(CF778880) tad19f10.y1 Hydra EST -IV Hydra magnipapillata cD... 62 2e-20 3
(DN813543) ACAC-aac51p03.g1 Hydra EST UCI 7 Hydra magnipapil... 62 2e-20 3
(CV463681) taj30a04.y1 Hydra EST UCI 5 ALP Hydra magnipapill... 62 2e-20 3
(CD268799) tab01b11.x1 Hydra EST -III Hydra magnipapillata c... 62 2e-20 3
(DJ205284) Method for identification of useful proteins deri... 72 2e-20 5
(AX829838) Sequence 558 from Patent WO03072602. 72 2e-20 5
(AX818808) Sequence 558 from Patent EP1338608. 72 2e-20 5
(AX594916) Sequence 570 from Patent EP1258494. 72 2e-20 5
(CV185197) taj10b01.y1 Hydra EST UCI 5 ALP Hydra magnipapill... 62 3e-20 3
(X51676) S.cerevisiae DNA for 38 kd nukleolar protein NOP1. 72 1e-19 5
(CF779739) tad14f12.y1 Hydra EST -IV Hydra magnipapillata cD... 58 2e-19 3
(Z74062) S.cerevisiae chromosome IV reading frame ORF YDL014w. 72 4e-19 5
(CK593098) tad40a09.y2 Hydra EST -Kiel 1 Hydra vulgaris cDNA... 62 8e-19 3
(J05230) S.cerevisiae fibrillarin (NOP1) gene, complete cds. 72 9e-19 5
(CN569387) tad43h04.x1 Hydra EST -Kiel 1 Hydra vulgaris cDNA... 62 1e-18 3
(CX094937) EHAG642TR E. histolytica Normalized cDNA library ... 100 4e-18 3
(CX094857) EHAG527TR E. histolytica Normalized cDNA library ... 100 5e-18 3
(CX090076) EHAE820TR E. histolytica Normalized cDNA library ... 100 5e-18 3
(CX079604) EHAA070TF E. histolytica Normalized cDNA library ... 100 5e-18 3
(CX084476) EHABR21TR E. histolytica Normalized cDNA library ... 100 5e-18 3
(CX083341) EHABA35TR E. histolytica Normalized cDNA library ... 100 5e-18 3
(AM679883) Entamoeba terrapinae GSS, clone terra173f04.p1k. 101 6e-18 2
(CX092722) EHAFA92TR E. histolytica Normalized cDNA library ... 100 6e-18 3
(CX098899) EHAHS31TR E. histolytica Normalized cDNA library ... 100 7e-18 3
(BH158811) ENTSF44TF Entamoeba histolytica Sheared DNA Entam... 100 7e-18 3
(CX092928) EHAFD92TR E. histolytica Normalized cDNA library ... 100 7e-18 3
(CX094697) EHAG302TR E. histolytica Normalized cDNA library ... 100 7e-18 3
(CX099206) EHAHW76TR E. histolytica Normalized cDNA library ... 100 8e-18 3
(CX089683) EHAE260TR E. histolytica Normalized cDNA library ... 100 8e-18 3
(CX095399) EHAGD14TR E. histolytica Normalized cDNA library ... 100 8e-18 3
(GE315989) OXBA-aaa37d06.b1 Oxytricha_pSMART_OXBA Sterkiella... 62 3e-17 3
(CR382137) Debaryomyces hansenii strain CBS767 chromosome E ... 101 4e-17 1
(CX079605) EHAA070TR E. histolytica Normalized cDNA library ... 100 7e-17 2
(BH148955) ENTQG67TF Entamoeba histolytica Sheared DNA Entam... 100 9e-17 2
(AZ673016) ENTHY29TF Entamoeba histolytica Sheared DNA Entam... 100 1e-16 2
(CR382123) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 88 3e-16 2
(CV465477) taj30a04.x1 Hydra EST UCI 5 ALP Hydra magnipapill... 62 2e-14 2
(CF673722) tac87b08.x1 Hydra EST -IV Hydra magnipapillata cD... 62 2e-14 2
(CF658977) tac53b01.x1 Hydra EST -IV Hydra magnipapillata cD... 62 2e-14 2
(CF654884) tac61h04.x1 Hydra EST -IV Hydra magnipapillata cD... 62 2e-14 2
(CF658886) tac51f06.x1 Hydra EST -IV Hydra magnipapillata cD... 62 2e-14 2
(CB890345) taa57f08.x1 Hydra EST -III Hydra magnipapillata c... 62 2e-14 2
(CD268525) taa95b05.x1 Hydra EST -III Hydra magnipapillata c... 62 2e-14 2
(CD267654) tab92c10.x1 Hydra EST -III Hydra magnipapillata c... 62 2e-14 2
(CF673431) tac97h03.x1 Hydra EST -IV Hydra magnipapillata cD... 62 2e-14 2
(CF778585) tad19f10.x1 Hydra EST -IV Hydra magnipapillata cD... 62 2e-14 2
(CB890270) taa52e12.x1 Hydra EST -III Hydra magnipapillata c... 62 2e-14 2
(CB888171) taa88d05.x1 Hydra EST -III Hydra magnipapillata c... 62 2e-14 2
(CD268050) tab74d09.x1 Hydra EST -III Hydra magnipapillata c... 62 2e-14 2
(CF777699) tad14f12.x1 Hydra EST -IV Hydra magnipapillata cD... 62 2e-14 2
(CD680802) tab59e04.x1 Hydra EST -III Hydra magnipapillata c... 62 2e-14 2
(CF658127) tac65a04.x1 Hydra EST -IV Hydra magnipapillata cD... 62 2e-14 2
(DN245687) ACAE-aaa29h16.b1 Hydra EST UCI 5 Hydra magnipapil... 62 2e-14 2
(CD566932) tac12e09.x1 Hydra EST -III Hydra magnipapillata c... 62 2e-14 2
(CV184996) taj10b01.x1 Hydra EST UCI 5 ALP Hydra magnipapill... 62 2e-14 2
(AW719233) LjNEST1e12r Lotus japonicus nodule library, matur... 50 2e-14 3
(Z48432) S. cerevisiae chromosome IV left arm (EU) DNA segme... 72 3e-14 5
(CF658403) tac65a04.y1 Hydra EST -IV Hydra magnipapillata cD... 50 4e-14 3
(AZ541048) ENTER49TF Entamoeba histolytica Sheared DNA Entam... 92 4e-14 1
(DN243919) ACAE-aaa49d02.b1 Hydra EST UCI 5 Hydra magnipapil... 62 7e-14 2
(BH948300) obu82h05.g1 B.oleracea002 Brassica oleracea genom... 56 3e-13 2
(EL591313) 65JKBNMO_UP_055_D11_18JUL2006_089 65JKBNM0 Brassi... 56 3e-13 2
(CD566892) tac11h12.x1 Hydra EST -III Hydra magnipapillata c... 58 3e-13 2
(GD169425) OXAX-aaa71d03.b1 Oxytricha_pSMART_OXAX Sterkiella... 88 7e-13 1
(GD167718) OXAX-aaa71d03.g1 Oxytricha_pSMART_OXAX Sterkiella... 88 7e-13 1
(GD167417) OXAX-aaa53c11.b1 Oxytricha_pSMART_OXAX Sterkiella... 88 7e-13 1
(DV666958) CGN-5022 Seed of Middle Development Stage Coffea ... 50 8e-13 4
(Z74061) S.cerevisiae chromosome IV reading frame ORF YDL013w. 72 1e-12 2
(BJ569531) Ipomoea nil cDNA clone:jm5n23, 3' end, single read. 44 4e-12 4
(BP507479) Hydra magnipapillata cDNA, clone:hmp_01018. 62 4e-12 2
(DR175398) HR0006_J14:B Triphysaria versicolor (parasitic pl... 42 4e-12 4
(EX138192) BR122022 root cDNA library KHRT Brassica rapa sub... 58 7e-12 3
(BQ970386) QHB41O21.yg.ab1 QH_ABCDI sunflower RHA801 Heliant... 44 7e-12 3
(DR175344) HR0006_G05:B Triphysaria versicolor (parasitic pl... 42 9e-12 4
(FG343391) SF_43-199R Bv_T0 Beta vulgaris subsp. vulgaris cD... 58 1e-11 2
(DC229374) Plasmodium berghei strain ANKA cDNA clone:SG01527... 60 1e-11 4
(CX685592) yde34f04.y2 Sea urchin EST Lib1 Strongylocentrotu... 54 1e-11 2
(EE405582) 17ACDHMS_UP_022_H06_27OCT2004_034 Brassica napus ... 50 1e-11 4
(DJ129794) Method for identification of useful proteins deri... 58 2e-11 5
(DY026659) 47RDOAH_UP_012_F06_11AUG2004_038 O. Alba 47RDOAH ... 50 3e-11 4
(EE533443) 46RDOAG_UP_044_E01_31DEC2004_007 O. Alba 46RDOAG ... 50 3e-11 4
(EH415445) OL1853F Brassica oleracea var. alboglabra leaf cD... 50 3e-11 4
(EE400821) 15ACDHYS_UP_007_H06_05MAR2004_034 Brassica napus ... 50 4e-11 4
(CX187770) 94-E022720-021-012-K23-frev ADIS-MPIZ 021 Brassic... 50 4e-11 4
(EE405580) 17ACDHMS_UP_022_H04_27OCT2004_018 Brassica napus ... 50 4e-11 4
(EE420346) 59ACAB6_UP_010_B01_22JUL2004_013 Brassica napus 5... 50 4e-11 4
(EV160152) 0084014 Brassica napus Bud library Brassica napus... 50 5e-11 4
(EV131068) 0163340 Brassica napus Flower Brassica napus cDNA... 50 5e-11 4
(EV131004) 0163250 Brassica napus Flower Brassica napus cDNA... 50 5e-11 4
(EV158384) 0082246 Brassica napus Bud library Brassica napus... 50 5e-11 4
(CT772349) Paramecium tetraurelia 5-PRIME EST from clone LK0... 62 5e-11 2
(ES940155) 47RDOAH_UP_053_H01_30JAN2006_001 Brassica olerace... 58 5e-11 3
(DY020282) 53COT5_T3_003_F08_28JUN2004_054 Brassica napus 36... 50 6e-11 4
(CN562887) taf78f11.x2 Hydra EST -Kiel 1 Hydra vulgaris cDNA... 62 6e-11 2
(CT738705) Paramecium tetraurelia 5-PRIME EST from clone LK0... 62 6e-11 2
(FE257584) CAPH6701.fwd CAPH Naegleria gruberi amoeba stage ... 48 6e-11 5
(CT754603) Paramecium tetraurelia 5-PRIME EST from clone LK0... 62 7e-11 2
(FE254081) CAPH4872.fwd CAPH Naegleria gruberi amoeba stage ... 48 8e-11 5
(FE231982) CAPG1508.fwd CAPG Naegleria gruberi amoeba stage ... 48 8e-11 5
(FE265974) CAZO4837.rev CAZO Naegleria gruberi Flagellate St... 48 9e-11 5
(FE256235) CAPH6007.fwd CAPH Naegleria gruberi amoeba stage ... 48 9e-11 5
(FE263156) CAZO3073.rev CAZO Naegleria gruberi Flagellate St... 48 9e-11 5
(FE261296) CAZO1921.fwd CAZO Naegleria gruberi Flagellate St... 48 9e-11 5
(FE261295) CAZO1921.rev CAZO Naegleria gruberi Flagellate St... 48 9e-11 5
(ES929250) 36RDBRG_UP_077_G02_19JAN2006_004 Brassica rapa 36... 58 9e-11 3
(DY027756) 47RDOAH_UP_026_A03_16AUG2004_031 O. Alba 47RDOAH ... 58 9e-11 3
(FE259218) CAPH7570.rev CAPH Naegleria gruberi amoeba stage ... 48 9e-11 5
(EE534939) 49RDOAT_UP_017_A04_29SEP2004_032 O. Alba 49RDOAT ... 58 1e-10 3
(FE250282) CAPH2761.rev CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE259219) CAPH7570.fwd CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE263157) CAZO3073.fwd CAZO Naegleria gruberi Flagellate St... 48 1e-10 5
(FE234269) CAPG2732.rev CAPG Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE256719) CAPH6255.fwd CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE256234) CAPH6007.rev CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE256011) CAPH5890.rev CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE259463) CAPH7705.rev CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE251335) CAPH3388.rev CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE249785) CAPH2477.fwd CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE260045) CAPH8059.rev CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE253150) CAPH4384.fwd CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(EE550686) BNQA_UP_036_H11_01OCT2003_081 Brassica napus BNQA... 58 1e-10 3
(FE254080) CAPH4872.rev CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE253773) CAPH4715.rev CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE238381) CAPG4829.rev CAPG Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE252553) CAPH4076.rev CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE231981) CAPG1508.rev CAPG Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE253921) CAPH4790.rev CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(EE519969) 36RDBRG_UP_046_B12_25JUN2004_094 Brassica rapa 36... 58 1e-10 3
(FE253149) CAPH4384.rev CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE240127) CAPG5701.rev CAPG Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE259464) CAPH7705.fwd CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(FE255233) CAPH5479.rev CAPH Naegleria gruberi amoeba stage ... 48 1e-10 5
(CN732911) 25RDBNM_UP_005_D05_15JAN2004_041 Brassica napus 2... 58 2e-10 3
(EV159484) 0083346 Brassica napus Bud library Brassica napus... 58 2e-10 3
(AR549503) Sequence 4634 from patent US 6747137. 40 2e-10 4
(EV159464) 0083326 Brassica napus Bud library Brassica napus... 58 2e-10 3
(FE249784) CAPH2477.rev CAPH Naegleria gruberi amoeba stage ... 48 2e-10 5
(EV158947) 0082809 Brassica napus Bud library Brassica napus... 58 2e-10 3
(EV113376) 0118688 Brassica napus Root library Brassica napu... 58 2e-10 3
(ES909801) BNARO6GH_T3_012_A12_07DEC2006_096 Brassica napus ... 58 2e-10 3
(FE256718) CAPH6255.rev CAPH Naegleria gruberi amoeba stage ... 48 2e-10 5
(FE255234) CAPH5479.fwd CAPH Naegleria gruberi amoeba stage ... 48 2e-10 5
(BJ568928) Ipomoea nil cDNA clone:jm4b06, 3' end, single read. 42 2e-10 4
(ES905138) BNARO4GH_T3_026_F06_25NOV2006_038 Brassica napus ... 58 2e-10 3
(ES904350) BNARO4GH_T3_018_B12_24NOV2006_094 Brassica napus ... 58 2e-10 3
(EV113465) 0118777 Brassica napus Root library Brassica napu... 58 2e-10 3
(EY066096) CATF9167.fwd CATF Artemisia annua, Tanzanian, fro... 50 3e-10 3
(DR395538) USDA-FP_155473 Adult Alate Aphis gossypii (WHAGA)... 42 3e-10 3
(FK136720) XABT171877.b1 Gateway compatible cien cDNA librar... 46 4e-10 4
(BF294437) 005PbB02 Pb cDNA #17, Tommaso Pace, Marta Ponzi, ... 60 4e-10 3
(DC220056) Plasmodium berghei strain ANKA cDNA clone:MZ00200... 60 4e-10 3
(EX686225) JS7C372JG Salt and heat stressed Fragaria vesca (... 50 4e-10 4
(DC222646) Plasmodium berghei strain ANKA cDNA clone:MZ00619... 60 5e-10 3
(CT812030) Paramecium tetraurelia 5-PRIME EST from clone LK0... 56 5e-10 3
(BU034448) QHJ4B21.yg.ab1 QH_EFGHJ sunflower RHA280 Helianth... 44 5e-10 3
(CT818490) Paramecium tetraurelia 5-PRIME EST from clone LK0... 56 5e-10 3
(EV053243) BNSCS3CT_UP_207_D05_13MAY2007_041 Brassica napus ... 50 5e-10 4
(BB972013) Plasmodium berghei str. ANKA cDNA clone: OK001706... 60 5e-10 3
(DC225372) Plasmodium berghei strain ANKA cDNA clone:SG00261... 60 6e-10 3
(EY066095) CATF9167.rev CATF Artemisia annua, Tanzanian, fro... 50 6e-10 3
(CN590988) TTE00012776 Normalized large Tetrahymena thermoph... 52 6e-10 4
(DY680208) TTDA612TG Tetrahymena thermophila EST library str... 52 6e-10 4
(EV131054) 0163326 Brassica napus Flower Brassica napus cDNA... 50 6e-10 4
(EW839547) G894P593RE6.T0 Ixodes scapularis Pooled Non-infec... 78 6e-10 1
(EW839546) G894P593FE6.T0 Ixodes scapularis Pooled Non-infec... 78 6e-10 1
(CN591142) TTE00014122 Normalized large Tetrahymena thermoph... 52 6e-10 4
(CN591152) TTE00006229 Normalized large Tetrahymena thermoph... 52 6e-10 4
(EV131137) 0163464 Brassica napus Flower Brassica napus cDNA... 50 6e-10 4
(FK176952) XABT196623.b1 Gateway compatible cien cDNA librar... 46 6e-10 4
(CN591210) TTE00013869 Normalized large Tetrahymena thermoph... 52 6e-10 4
(CX583425) TTE00024111 Amplicon Express - Conjugative Form T... 52 7e-10 4
(CN591299) TTE00014194 Normalized large Tetrahymena thermoph... 52 7e-10 4
(CN591332) TTE00014325 Normalized large Tetrahymena thermoph... 52 7e-10 4
(CN591329) TTE00012837 Normalized large Tetrahymena thermoph... 52 7e-10 4
(CN591496) TTE00014772 Normalized large Tetrahymena thermoph... 52 7e-10 4
(CN591484) TTE00006395 Normalized large Tetrahymena thermoph... 52 7e-10 4
(CN591502) TTE00006474 Normalized large Tetrahymena thermoph... 52 7e-10 4
(CN591622) TTE00011102 Normalized large Tetrahymena thermoph... 52 7e-10 4
(CN591715) TTE00012000 Normalized large Tetrahymena thermoph... 52 7e-10 4
(CN591699) TTE00011825 Normalized large Tetrahymena thermoph... 52 7e-10 4
(CN591758) TTE00011194 Normalized large Tetrahymena thermoph... 52 7e-10 4
(CN591864) TTE00006406 Normalized large Tetrahymena thermoph... 52 7e-10 4
(CN592082) TTE00008579 Normalized large Tetrahymena thermoph... 52 7e-10 4
(CN592357) TTE00009477 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN592438) TTE00008703 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN592434) TTE00007430 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN592430) TTE00006875 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN592429) TTE00008886 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN592428) TTE00006941 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN592397) TTE00012845 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN592475) TTE00013183 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN592465) TTE00013851 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN592496) TTE00013679 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CT790637) Paramecium tetraurelia 5-PRIME EST from clone LK0... 56 8e-10 3
(CT782261) Paramecium tetraurelia 3-PRIME EST from clone LK0... 56 8e-10 3
(CT767080) Paramecium tetraurelia 5-PRIME EST from clone LK0... 56 8e-10 3
(CT813157) Paramecium tetraurelia 5-PRIME EST from clone LK0... 56 8e-10 3
(CT794142) Paramecium tetraurelia 5-PRIME EST from clone LK0... 56 8e-10 3
(CN592973) TTE00012748 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN592993) TTE00010723 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN592988) TTE00012503 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN593045) TTE00007477 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CT788754) Paramecium tetraurelia 5-PRIME EST from clone LK0... 56 8e-10 3
(CN593118) TTE00013879 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN593243) TTE00013437 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN593231) TTE00006278 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN593222) TTE00007552 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN593208) TTE00014376 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN593317) TTE00009146 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN593313) TTE00009382 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN593389) TTE00012563 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN593477) TTE00013919 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN593465) TTE00008727 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN593746) TTE00011938 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN593742) TTE00011799 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CT797218) Paramecium tetraurelia 5-PRIME EST from clone LK0... 56 8e-10 3
(CN593826) TTE00013794 Normalized large Tetrahymena thermoph... 52 8e-10 4
(FF566698) TTBA395TG Tetrahymena thermophila CU428 log phase... 52 8e-10 4
(CN593907) TTE00006476 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN593939) TTE00015062 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN593936) TTE00007744 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN593988) TTE00012960 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN594082) TTE00006508 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN594049) TTE00014542 Normalized large Tetrahymena thermoph... 52 8e-10 4
(CN594202) TTE00007359 Normalized large Tetrahymena thermoph... 52 9e-10 4
(ES912823) BNARO2GH_T3_025_B09_15DEC2006_077 Brassica napus ... 62 9e-10 2
(CN594281) TTE00012342 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594405) TTE00010221 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594343) TTE00007162 Normalized large Tetrahymena thermoph... 52 9e-10 4
(FF566654) TTBA362TG Tetrahymena thermophila CU428 log phase... 52 9e-10 4
(CN594447) TTE00009116 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594438) TTE00013016 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594427) TTE00009841 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594502) TTE00007723 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594498) TTE00008846 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594487) TTE00013356 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594597) TTE00007936 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594577) TTE00012756 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594576) TTE00006908 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594552) TTE00010417 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594671) TTE00010123 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594628) TTE00013294 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594810) TTE00010264 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594800) TTE00009012 Normalized large Tetrahymena thermoph... 52 9e-10 4
(FF566322) TTBA085TG Tetrahymena thermophila CU428 log phase... 52 9e-10 4
(CN594888) TTE00011520 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594877) TTE00007920 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594875) TTE00008035 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594851) TTE00007688 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594848) TTE00006984 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594948) TTE00008847 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594928) TTE00013288 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN594897) TTE00015329 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN595193) TTE00007574 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN595334) TTE00011914 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN595453) TTE00006880 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN595430) TTE00014170 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN595521) TTE00014442 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN595516) TTE00008170 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN595504) TTE00009488 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN595624) TTE00015223 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN595597) TTE00011290 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN595578) TTE00008962 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN595648) TTE00010608 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN595647) TTE00007890 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN595842) TTE00008959 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN595824) TTE00007975 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN595940) TTE00007568 Normalized large Tetrahymena thermoph... 52 9e-10 4
(CN596417) TTE00012038 Normalized large Tetrahymena thermoph... 52 1e-09 4
(CN596580) TTE00014945 Normalized large Tetrahymena thermoph... 52 1e-09 4
(CN596996) TTE00015160 Normalized large Tetrahymena thermoph... 52 1e-09 4
(CN597114) TTE00006264 Normalized large Tetrahymena thermoph... 52 1e-09 4
(CN597161) TTE00010150 Normalized large Tetrahymena thermoph... 52 1e-09 4
(CN597725) TTE00009783 Normalized large Tetrahymena thermoph... 52 1e-09 4
(CN597720) TTE00008016 Normalized large Tetrahymena thermoph... 52 1e-09 4
(CN597764) TTE00006765 Normalized large Tetrahymena thermoph... 52 1e-09 4
(CN598012) TTE00014361 Normalized large Tetrahymena thermoph... 52 1e-09 4
(CN598091) TTE00013464 Normalized large Tetrahymena thermoph... 52 1e-09 4
(CN598159) TTE00009923 Normalized large Tetrahymena thermoph... 52 1e-09 4
(CN598156) TTE00008191 Normalized large Tetrahymena thermoph... 52 1e-09 4
(CN598383) TTE00012418 Normalized large Tetrahymena thermoph... 52 1e-09 4
(CN598446) TTE00013563 Normalized large Tetrahymena thermoph... 52 1e-09 4
(CN598697) TTE00011123 Normalized large Tetrahymena thermoph... 52 1e-09 4
(FF566369) TTBA125TG Tetrahymena thermophila CU428 log phase... 52 1e-09 4
(CN598979) TTE00008421 Normalized large Tetrahymena thermoph... 52 1e-09 4
(CN599169) TTE00008212 Normalized large Tetrahymena thermoph... 52 1e-09 4
(FF566564) TTBA285TG Tetrahymena thermophila CU428 log phase... 52 1e-09 4
(EX046892) BR031536 floral buds cDNA library KBFS Brassica r... 50 1e-09 3
(FF566550) TTBA273TG Tetrahymena thermophila CU428 log phase... 52 1e-09 4
(FF566388) TTBA139TG Tetrahymena thermophila CU428 log phase... 52 1e-09 4
(EE417249) 58ACPE48_UP_003_D09_17SEP2004_073 Brassica napus ... 50 1e-09 3
(EE404903) 17ACDHMS_UP_015_C09_27OCT2004_075 Brassica napus ... 50 2e-09 3
(EX123282) BR107112 mature green leaf cDNA library KHLM Bras... 50 2e-09 3
(EV029377) BNSCS2CT_UP_186_F11_27APR2007_085 Brassica napus ... 50 2e-09 3
(CX196170) 01-E022899-021-017-A02-frev ADIS-MPIZ 021 Brassic... 50 2e-09 3
(EV057621) BNSCS3CT_UP_261_E11_19MAY2007_087 Brassica napus ... 50 2e-09 3
(EX134684) BR118514 root cDNA library KHRT Brassica rapa sub... 50 2e-09 3
(EX078886) BR063530 silique cDNA library KBSP Brassica rapa ... 50 2e-09 3
(EV161317) 0085179 Brassica napus Bud library Brassica napus... 50 2e-09 3
(EV161533) 0085395 Brassica napus Bud library Brassica napus... 50 2e-09 3
(CJ414975) Molgula tectiformis cDNA, larva clone:mtlv020d13,... 52 2e-09 3
(EX098291) BR084581 root cDNA library KFRT Brassica rapa sub... 50 2e-09 3
(EX125217) BR109047 mature green leaf cDNA library KHLM Bras... 50 2e-09 3
(EV161608) 0085470 Brassica napus Bud library Brassica napus... 50 2e-09 3
(BH723249) BOHWZ89TF BO_2_3_KB Brassica oleracea genomic clo... 58 2e-09 3
(EL588246) 65JKBNM0_T3_018_G04_17MAR2005_020 65JKBNM0 Brassi... 50 2e-09 3
(EV158999) 0082861 Brassica napus Bud library Brassica napus... 50 2e-09 3
(EV159591) 0083453 Brassica napus Bud library Brassica napus... 50 2e-09 3
(EV161690) 0085552 Brassica napus Bud library Brassica napus... 50 2e-09 3
(EV158924) 0082786 Brassica napus Bud library Brassica napus... 50 2e-09 3
(EV157169) 0081031 Brassica napus Bud library Brassica napus... 50 2e-09 3
(EV161451) 0085313 Brassica napus Bud library Brassica napus... 50 2e-09 3
(EV159660) 0083522 Brassica napus Bud library Brassica napus... 50 2e-09 3
(EV157253) 0081115 Brassica napus Bud library Brassica napus... 50 2e-09 3
(EV094123) 0192124 Brassica napus Apical meristem Brassica n... 50 2e-09 3
(EL590158) 65JKBNM0_T3_041_E04_19MAR2005_024 65JKBNM0 Brassi... 50 2e-09 3
(EV094205) 0192206 Brassica napus Apical meristem Brassica n... 50 2e-09 3
(EX098515) BR084805 root cDNA library KFRT Brassica rapa sub... 50 2e-09 3
(CV735883) Cri2_14_E21_SP6 Ceratopteris Spore Library Cerato... 76 2e-09 1
(CJ427416) Molgula tectiformis cDNA, larva clone:mtlv029l15,... 52 3e-09 3
(CJ418176) Molgula tectiformis cDNA, larva clone:mtlv029l15,... 52 3e-09 3
(CJ412314) Molgula tectiformis cDNA, larva clone:mtlv012f09,... 52 3e-09 3
(EX139081) BR122911 primary leaf cDNA library KLPS Brassica ... 50 3e-09 3
(EX133630) BR117460 root cDNA library KHRT Brassica rapa sub... 50 3e-09 3
(CX195879) 03-E024793-021-017-A02q-frev ADIS-MPIZ 021 Brassi... 50 3e-09 3
(EX119139) BR102969 cotyledon cDNA library KHCT Brassica rap... 50 3e-09 3
(CJ424164) Molgula tectiformis cDNA, larva clone:mtlv020d13,... 52 3e-09 3
(CV301948) MM4_D03 Young roots probed with 7 week old root e... 50 3e-09 2
(EX138224) BR122054 root cDNA library KHRT Brassica rapa sub... 50 3e-09 3
(EH785689) CNSS24942.b1_L20.ab1 CNS(LMS) yellow starthistle ... 54 3e-09 2
(EC822026) SME00003197 esmbsro2 Sawyeria marylandensis cDNA,... 54 3e-09 2
(FE850413) CAFP1164.rev CAFP Pichia stipitis aerobic xylose ... 74 3e-09 2
(CJ428658) Molgula tectiformis cDNA, larva clone:mtlv012f09,... 52 3e-09 3
(FE850414) CAFP1164.fwd CAFP Pichia stipitis aerobic xylose ... 74 3e-09 2
(FE860420) CAFY621.fwd CAFY Pichia stipitis oxygen limited x... 74 3e-09 2
(FE860419) CAFY621.rev CAFY Pichia stipitis oxygen limited x... 74 4e-09 2
(FE846066) CAFI533.rev CAFI Pichia stipitis aerobic dextrose... 74 4e-09 2
(FE846067) CAFI533.fwd CAFI Pichia stipitis aerobic dextrose... 74 4e-09 2
(FD459558) LARV972TR Haematobia irritans 1st Instar Larvae H... 58 4e-09 3
(FE253922) CAPH4790.fwd CAPH Naegleria gruberi amoeba stage ... 48 4e-09 5
(FD449898) EGGA212TF Haematobia irritans eggs Haematobia irr... 58 4e-09 3
(FD456087) EGGB559TF Haematobia irritans eggs Haematobia irr... 58 4e-09 3
(FD459557) LARV972TF Haematobia irritans 1st Instar Larvae H... 58 4e-09 3
(FD449899) EGGA212TR Haematobia irritans eggs Haematobia irr... 58 4e-09 3
(FE256012) CAPH5890.fwd CAPH Naegleria gruberi amoeba stage ... 48 4e-09 5
(FD459746) LARVA92TR Haematobia irritans 1st Instar Larvae H... 58 4e-09 3
(FD460414) LARVF19TR Haematobia irritans 1st Instar Larvae H... 58 4e-09 3
(FD456088) EGGB559TR Haematobia irritans eggs Haematobia irr... 58 5e-09 3
(X77962) T.thermophila Fibrillarin mRNA. 52 5e-09 4
(FD454159) EGGAS69TR Haematobia irritans eggs Haematobia irr... 58 5e-09 3
(FD459745) LARVA92TF Haematobia irritans 1st Instar Larvae H... 58 5e-09 3
(FD458146) LARV117TR Haematobia irritans 1st Instar Larvae H... 58 5e-09 3
(FD458145) LARV117TF Haematobia irritans 1st Instar Larvae H... 58 5e-09 3
(FD460413) LARVF19TF Haematobia irritans 1st Instar Larvae H... 58 5e-09 3
(FD454158) EGGAS69TF Haematobia irritans eggs Haematobia irr... 58 5e-09 3
(ES269656) JKBNM4_T7_002_C04_10FEB2004_028 JKBNM4 Brassica n... 50 6e-09 4
(BE998285) EST430008 GVSN Medicago truncatula cDNA clone pGV... 58 6e-09 3
(BG582014) EST483751 GVN Medicago truncatula cDNA clone pGVN... 58 6e-09 3
(CT756826) Paramecium tetraurelia 5-PRIME EST from clone LK0... 56 6e-09 3
(CJ350342) Molgula tectiformis cDNA, cleaving embryo clone:m... 52 6e-09 3
(BF638374) NF045E07PL1F1053 Phosphate starved leaf Medicago ... 58 7e-09 3
(BQ124385) EST609961 GLSD Medicago truncatula cDNA clone pGL... 58 7e-09 3
(EY478563) METBF63TF JCVI-MT3 Medicago truncatula cDNA 5', m... 58 7e-09 3
(BM164248) EST566771 PyBS Plasmodium yoelii yoelii cDNA clon... 48 8e-09 4
(CB894768) EST647560 HOGA Medicago truncatula cDNA clone HOG... 58 8e-09 3
(BM167538) EST570061 PyBS Plasmodium yoelii yoelii cDNA clon... 48 8e-09 4
(BI309854) EST5311604 GESD Medicago truncatula cDNA clone pG... 58 9e-09 3
(FC816587) Sr_pAMT7_06i16_T7 S. ratti mixed stage pAMP Stron... 48 9e-09 3
(EX088457) BR074747 flower cDNA library KFFB Brassica rapa s... 58 9e-09 3
(AM654881) Entamoeba moshkovskii FIC GSS, clone mosh017h04.q1k. 64 9e-09 2
(CN593509) TTE00008982 Normalized large Tetrahymena thermoph... 52 1e-08 4
(CU915248) Brassica rapa subsp. pekinensis clone KBrB092K08,... 50 1e-08 2
(CU984540) Brassica rapa subsp. pekinensis clone KBrB002B04,... 58 1e-08 2
(AC189309) Brassica rapa subsp. pekinensis clone KBrB034C07,... 58 1e-08 2
(CU914558) Brassica rapa subsp. pekinensis clone KBrH123L20,... 58 1e-08 2
(CT014858) KBrH123L20 genomic clone, KBrH (HindIII) BAC libr... 58 1e-08 2
(CT014866) KBrH123L22 genomic clone, KBrH (HindIII) BAC libr... 58 1e-08 2
(DY026289) 47RDOAH_UP_008_E04_28JUL2004_024 O. Alba 47RDOAH ... 58 1e-08 2
(EL590555) 65JKBNMO_UP_046_B12_17JUL2006_094 65JKBNM0 Brassi... 50 1e-08 2
(EE474142) BNYS2DCT_UP_009_G12_28FEB2005_084 Brassica napus ... 58 1e-08 2
(ES980757) 40JKME7D_UP_036_H08_18JUN2006_050 Brassica napus ... 58 1e-08 2
(EX120238) BR104068 defected leaf cDNA library KHLD Brassica... 50 1e-08 2
(CO750044) KBrAE004M20d A leaf cDNA library of Chinese Cabba... 50 1e-08 2
(EE545722) 9RDBNGA_UP_072_C03_03APR2005_027 Brassica napus -... 50 1e-08 2
(EX082765) BR067409 silique cDNA library KBSP Brassica rapa ... 50 1e-08 2
(EX073205) BR057849 root cDNA library KBRT Brassica rapa sub... 50 1e-08 2
(EX032101) BR016745 callus cDNA library KBCG Brassica rapa s... 58 1e-08 2
(EX029477) BR014121 callus cDNA library KBCG Brassica rapa s... 58 1e-08 2
(ES946912) 49RDOATR_UP_044_G05_25OCT2004_035 Brassica olerac... 50 1e-08 3
(EL592077) 65JKBNMO_UP_065_C06_17JUL2006_044 65JKBNM0 Brassi... 50 1e-08 3
(ES991893) BNAEN1GH_UP_073_E07_22JUL2006_055 Brassica napus ... 50 2e-08 3
(ES938811) 46RDOAG_UP_067_H06_01FEB2006_034 Brassica olerace... 50 2e-08 3
(CK900837) TSL234 Taiwania seedling cDNA library Taiwania cr... 46 2e-08 4
(FG344050) SF_61-195F Bv_T0 Beta vulgaris subsp. vulgaris cD... 50 2e-08 3
(DN254021) TSS678 Taiwania developing stem tissue cDNA libra... 46 2e-08 4
(FK127508) XABT166366.b1 Gateway compatible cien cDNA librar... 46 2e-08 4
(EE403243) 16ACDHDS_UP_020_G07_15OCT2004_051 Brassica napus ... 50 2e-08 3
(EE513536) 26RDBNT_UP_039_C11_16FEB2004_091 Brassica napus 2... 50 2e-08 3
(AM388170) Brassica oleracea var. alboglabra EST, clone AAF... 50 2e-08 3
(DC222602) Plasmodium berghei strain ANKA cDNA clone:MZ00612... 54 2e-08 3
(FK048155) XABT116347.b1 Gateway compatible cien cDNA librar... 46 2e-08 4
(ES897873) 60ACAB48R_UP_016_H04_22OCT2004_018 Brassica napus... 50 2e-08 3
(EE554719) BNQA_UP_118_B08_09NOV2005_062 Brassica napus BNQA... 50 2e-08 3
(EV021160) BNSCS2CT_UP_073_F03_18APR2007_021 Brassica napus ... 50 2e-08 3
(EE421083) 59ACAB6_UP_018_C12_23JUL2004_092 Brassica napus 5... 50 3e-08 3
(ES925101) 25RDBNM_UP_093_G09_05MAR2006_067 Brassica napus 2... 50 3e-08 3
(DV139684) CV03123A2H04.f1 CV03-normalized library Euphorbia... 50 3e-08 3
(EE440364) 6ETGS6H_UP_013_E04_15NOV2004_024 Brassica napus 6... 50 3e-08 3
(CV515629) 0048P0010Z_H11_T7 Mimulus guttatus library 1 Mimu... 48 3e-08 4
(CV516281) 0048P0014Z_C01_T7 Mimulus guttatus library 1 Mimu... 48 3e-08 4
(CX269622) 39RDBRT_UP_001_A08_02APR2004_064 Brassica rapa 39... 50 3e-08 3
(EE543256) 9RDBNGA_UP_037_C07_03DEC2003_059 Brassica napus -... 50 3e-08 3
(CV515401) 0048P0009Z_D01_T7 Mimulus guttatus library 1 Mimu... 48 3e-08 4
(FF737870) XABT50613.fwd Gateway compatible cien cDNA librar... 46 3e-08 4
(CV515248) 0048P0008Z_F07_T7 Mimulus guttatus library 1 Mimu... 48 3e-08 4
(EE437869) 64ETCOT5_T3_009_B03_14JAN2005_029 Brassica napus ... 50 3e-08 3
(EV113250) 0118562 Brassica napus Root library Brassica napu... 50 3e-08 3
(EV156299) 0080161 Brassica napus Bud library Brassica napus... 50 3e-08 3
(EV158183) 0082045 Brassica napus Bud library Brassica napus... 50 3e-08 3
(EV115460) 0120772 Brassica napus Root library Brassica napu... 50 3e-08 3
(FD939433) RS1GE20TF RS1(AR) Raphanus sativus var. oleiformi... 42 3e-08 3
(EV125363) 0130675 Brassica napus Root library Brassica napu... 50 3e-08 3
(CD290048) StrPu538.003207 Sea urchin embryo 7hr cleavage st... 54 3e-08 2
(EE566474) BNZB_UP_134_H10_27SEP2005_066 Brassica napus BNZB... 50 4e-08 3
(FD935562) RS1GE20JQ RS1(AR) Raphanus sativus var. oleiformi... 42 4e-08 3
(AB207972) Nicotiana tabacum NtFib1 mRNA for tobacco fibrill... 72 4e-08 1
(DJ025872) Genome-wide DNA marker of Saccharomyces cerevisiae. 72 4e-08 1
(FI007432) CHO_OF6900xn04r1.ab1 CHO_OF6 Nicotiana tabacum ge... 72 4e-08 1
(FH467216) CHO_OF4960xl06r1.ab1 CHO_OF4 Nicotiana tabacum ge... 72 4e-08 1
(ES546537) TF1003E06pTV TF1 Tribolium castaneum cDNA, mRNA s... 72 4e-08 1
(EB443158) KR2B.001F13F.050815T7 KR2B Nicotiana tabacum cDNA... 72 4e-08 1
(DT785690) 125244768 TH1 Tribolium castaneum cDNA clone 12K1... 72 4e-08 1
(DT779283) 125654759 TH1 Tribolium castaneum cDNA clone 48M7... 72 4e-08 1
(DT778461) 125659914 TH1 Tribolium castaneum cDNA clone 23G2... 72 4e-08 1
(DT775826) 125250498 TH1 Tribolium castaneum cDNA clone 12K1... 72 4e-08 1
(DT772232) 125644033 TH1 Tribolium castaneum cDNA clone 48M7... 72 4e-08 1
(DT771674) 125653784 TH1 Tribolium castaneum cDNA clone 23G2... 72 4e-08 1
(CB335156) Tc004B04R Tribolium castaneum embryonic cDNA libr... 72 4e-08 1
(CB335155) Tc004B04F Tribolium castaneum embryonic cDNA libr... 72 4e-08 1
(EC758023) PPE00006635 Agencourt Biosciences Agen-0020 Non-n... 48 4e-08 2
(AB019226) Arabidopsis thaliana genomic DNA, chromosome 5, T... 58 4e-08 2
(EV115549) 0120861 Brassica napus Root library Brassica napu... 50 4e-08 3
(EV115543) 0120855 Brassica napus Root library Brassica napu... 50 4e-08 3
(AV785498) Arabidopsis thaliana cDNA clone:RAFL06-16-O11, 3'... 62 5e-08 2
(AF265547) Arabidopsis thaliana fibrillarin 1 (FIB1) gene, c... 58 5e-08 2
(AK230239) Arabidopsis thaliana mRNA for fibrillarin homolog... 58 5e-08 2
(EL564184) Physarum01503 Physarum polycephalum starvation st... 48 5e-08 2
(AY139769) Arabidopsis thaliana AT5g52470/K24M7_22 mRNA, com... 58 5e-08 2
(AF187871) Arabidopsis thaliana fibrillarin homolog (Fbr1) m... 58 5e-08 2
(AF233443) Arabidopsis thaliana fibrillarin 1 (FIB1) mRNA, c... 58 5e-08 2
(EX262532) 1442846_5_J20_072 PY06 Carica papaya cDNA, mRNA s... 58 5e-08 2
(EX288488) 1576174_5_J04_008 PY06 Carica papaya cDNA, mRNA s... 58 5e-08 2
(EX268534) 1448996_5_K02_005 PY06 Carica papaya cDNA, mRNA s... 58 5e-08 2
(EX300203) 1614684_5_F18_075 PY06 Carica papaya cDNA, mRNA s... 58 5e-08 2
(BT004541) Arabidopsis thaliana AT5g52470/K24M7_22 gene, com... 58 5e-08 2
(EX290917) 1578952_5_M22_083 PY06 Carica papaya cDNA, mRNA s... 58 5e-08 2
(CW801574) WiscDsLox494D10 Arabidopsis thaliana T-DNA insert... 58 5e-08 2
(EV004954) BNAEN3GH_UP_183_A04_25NOV2006_032 Brassica napus ... 48 5e-08 2
(DR376887) 992352 CERES-130 Arabidopsis thaliana cDNA clone ... 58 5e-08 2
(EE556169) BNQA_UP_154_C01_10NOV2005_011 Brassica napus BNQA... 48 5e-08 2
(DR383947) 13148808 CERES-AN65 Arabidopsis thaliana cDNA clo... 58 5e-08 2
(AV542188) Arabidopsis thaliana cDNA clone:RZ180b06F, 3' end. 58 5e-08 2
(BW202325) Ciona intestinalis cDNA, clone:cicl080o21, 5' end... 38 5e-08 4
(FE856409) CAFU613.fwd CAFU Pichia stipitis oxygen limited d... 70 5e-08 2
(FE856408) CAFU613.rev CAFU Pichia stipitis oxygen limited d... 70 5e-08 2
(DU682374) Bst014910 lambda03 Boechera stricta genomic clone... 66 6e-08 2
(CQ804082) Sequence 493 from Patent WO2004035798. 62 6e-08 2
(AX507959) Sequence 2654 from Patent WO0216655. 62 6e-08 2
(AY142647) Arabidopsis thaliana fibrillarin 2 (AtFib2) (At4g... 62 6e-08 2
(BW243014) Ciona intestinalis cDNA, clone:citb104c10, 5' end... 38 7e-08 4
(BW245566) Ciona intestinalis cDNA, clone:citb068b13, 5' end... 38 8e-08 4
(AY084608) Arabidopsis thaliana clone 11319 mRNA, complete s... 62 8e-08 2
(AF233444) Arabidopsis thaliana fibrillarin 2 (FIB2) mRNA, c... 62 8e-08 2
(BF298393) 016PbH05 Pb cDNA #20, Charles Yowell and Jane Car... 54 8e-08 3
(AY046027) Arabidopsis thaliana putative fibrillarin 2 prote... 62 8e-08 2
(AV675675) Ciona intestinalis cDNA clone:citb13c17 : 5' end,... 38 8e-08 4
(AV980716) Ciona intestinalis cDNA, clone:cicl42g07, 5' end,... 38 9e-08 4
(BW033393) Ciona intestinalis cDNA, clone:cibd022n05, 5' end... 38 9e-08 4
(BF294456) 005PbC09 Pb cDNA #17, Tommaso Pace, Marta Ponzi, ... 52 9e-08 3
(BW043004) Ciona intestinalis cDNA, clone:cibd051g22, 5' end... 38 1e-07 4
(EE637891) CHEL9299.b1_E21.ab1 CHE(LMS) serpentine sunflower... 42 1e-07 3
(EX657165) JS1A382JGB Salt stressed Fragaria vesca (strain H... 42 1e-07 4
(EX633124) 256585174 Pea aphid whole body normalized full le... 46 1e-07 3
(FF294398) 279299171 Pea aphid whole body normalized full le... 46 1e-07 3
(EX662609) JS1BZ40JG Salt stressed Fragaria vesca (strain Ha... 42 1e-07 4
(EV158255) 0082117 Brassica napus Bud library Brassica napus... 50 1e-07 3
(EX677821) JS5BG51JG Draught stressed Fragaria vesca (strain... 42 1e-07 4
(CN591643) TTE00012411 Normalized large Tetrahymena thermoph... 44 1e-07 4
(FC811111) Sr_pASP6_06i16_SP6 S. ratti mixed stage pAMP Stro... 46 1e-07 3
>(AU264688) Dictyostelium discoideum vegetative cDNA clone:VSD871,
3' end single read.
Length = 643
Score = 1005 bits (507), Expect(2) = 0.0
Identities = 510/510 (100%)
Strand = Plus / Plus
Query: 376 aaattcatattaaaccaggtagtaaagtactctacattggtgctgcttcaggtactacca 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 aaattcatattaaaccaggtagtaaagtactctacattggtgctgcttcaggtactacca 193
Query: 436 tttcacatgtttcagatatagttggtccaaccggtgttgtctatggtattgaattatccc 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tttcacatgtttcagatatagttggtccaaccggtgttgtctatggtattgaattatccc 253
Query: 496 atcgtccaggtagagatttaattggtatggccaaaaagagaaccaatgttatcccaatca 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atcgtccaggtagagatttaattggtatggccaaaaagagaaccaatgttatcccaatca 313
Query: 556 ttgaagatgctcgtcacccacaaaaatatagaatgctcatcggtatggtcgatgttgtat 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttgaagatgctcgtcacccacaaaaatatagaatgctcatcggtatggtcgatgttgtat 373
Query: 616 ttgctgatgttgctcaaccaaatcaagctcaaattgttgctcaaaactctgcttactttt 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttgctgatgttgctcaaccaaatcaagctcaaattgttgctcaaaactctgcttactttt 433
Query: 676 taaagaacgaaggtcactttatcatttcaattaaagcaagctgtatcgattcaactgctc 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 taaagaacgaaggtcactttatcatttcaattaaagcaagctgtatcgattcaactgctc 493
Query: 736 caactgaagttgttgtacaaaatgaaatcacaaaattaaagaaagaaaaattaagaccac 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 caactgaagttgttgtacaaaatgaaatcacaaaattaaagaaagaaaaattaagaccac 553
Query: 796 aacatcttttaaaaactttagatccatatgaacgtaatcactctttagtaattggtgtct 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aacatcttttaaaaactttagatccatatgaacgtaatcactctttagtaattggtgtct 613
Query: 856 atagaaaattnggttcatctaaaaataaat 885
||||||||||||||||||||||||||||||
Sbjct: 614 atagaaaattnggttcatctaaaaataaat 643
Score = 270 bits (136), Expect(2) = 0.0
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 242 agaggtaaagaagaatcattagccacattaaactctgtaccaggtgaatcagtttacgaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaggtaaagaagaatcattagccacattaaactctgtaccaggtgaatcagtttacgaa 60
Query: 302 gataaaaaagaatacagaatttggaatccattcagatcaaagattgccgccggtttacat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gataaaaaagaatacagaatttggaatccattcagatcaaagattgccgccggtttacat 120
Query: 362 cgtggtgttgatgaaa 377
||||||||||||||||
Sbjct: 121 cgtggtgttgatgaaa 136
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 986,694,622
Number of extensions: 95997406
Number of successful extensions: 6574925
Number of sequences better than 10.0: 1718
Length of query: 885
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 861
Effective length of database: 96,409,374,237
Effective search space: 83008471218057
Effective search space used: 83008471218057
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.27 |
| Homology vs Protein |
Query= Contig-U16187-1 (Contig-U16187-1Q) /CSM_Contig/Contig-U16187-1Q.Seq.d
(885 letters)
Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q55CW0) RecName: Full=rRNA 2'-O-methyltransferase fibrillarin; ... 328 e-108
(P22509) RecName: Full=rRNA 2'-O-methyltransferase fibrillarin; ... 241 7e-74
BC148117_1(BC148117|pid:none) Bos taurus fibrillarin, mRNA (cDNA... 239 2e-73
AK146328_1(AK146328|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 239 2e-73
(P35550) RecName: Full=rRNA 2'-O-methyltransferase fibrillarin; ... 239 2e-73
M59849_1(M59849|pid:none) Human fibrillarin (Hfib1) mRNA, comple... 239 2e-73
(P22087) RecName: Full=rRNA 2'-O-methyltransferase fibrillarin; ... 239 2e-73
AC005393_3(AC005393|pid:none) Homo sapiens chromosome 19, CIT-HS... 239 2e-73
BC015218_1(BC015218|pid:none) Homo sapiens fibrillarin, mRNA (cD... 239 2e-73
BC062511_1(BC062511|pid:none) Xenopus tropicalis fibrillarin, mR... 239 2e-73
BC045093_1(BC045093|pid:none) Xenopus laevis FIB, mRNA (cDNA clo... 238 8e-73
(P22232) RecName: Full=rRNA 2'-O-methyltransferase fibrillarin; ... 236 2e-72
(Q80WS3) RecName: Full=rRNA/tRNA 2'-O-methyltransferase fibrilla... 239 3e-72
(Q8I1F4) RecName: Full=rRNA 2'-O-methyltransferase fibrillarin; ... 240 4e-72
(Q9W1V3) RecName: Full=rRNA 2'-O-methyltransferase fibrillarin; ... 239 9e-72
BT045419_1(BT045419|pid:none) Salmo salar clone ssal-rgf-520-381... 238 1e-71
AB173607_1(AB173607|pid:none) Macaca fascicularis brain cDNA clo... 232 3e-71
AY046027_1(AY046027|pid:none) Arabidopsis thaliana putative fibr... 233 7e-71
AB207972_1(AB207972|pid:none) Nicotiana tabacum NtFib1 mRNA for ... 232 7e-71
FM244835_1(FM244835|pid:none) Nicotiana benthamiana mRNA for fib... 232 9e-71
AC130809_17(AC130809|pid:none) Medicago truncatula clone mth2-15... 233 9e-71
CP000587_120(CP000587|pid:none) Ostreococcus lucimarinus CCE9901... 231 2e-70
(P35551) RecName: Full=rRNA 2'-O-methyltransferase fibrillarin; ... 229 2e-70
AP004020_11(AP004020|pid:none) Oryza sativa Japonica Group genom... 233 4e-70
CP001323_273(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 231 4e-70
AF187871_1(AF187871|pid:none) Arabidopsis thaliana fibrillarin h... 230 6e-70
AK243312_1(AK243312|pid:none) Oryza sativa Japonica Group cDNA, ... 231 1e-69
(Q9FEF8) RecName: Full=rRNA 2'-O-methyltransferase fibrillarin 1... 229 1e-69
(Q6FN88) RecName: Full=rRNA 2'-O-methyltransferase fibrillarin; ... 228 1e-69
EU959882_1(EU959882|pid:none) Zea mays clone 220227 fibrillarin-... 230 2e-69
AF051216_1(AF051216|pid:none) Picea mariana probable fibrillarin... 234 3e-69
(Q27200) RecName: Full=rRNA 2'-O-methyltransferase fibrillarin; ... 232 4e-69
CR382123_188(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 227 5e-69
FN392322_846(FN392322|pid:none) Pichia pastoris GS115 chromosome... 228 5e-69
(Q22053) RecName: Full=rRNA 2'-O-methyltransferase fibrillarin; ... 229 9e-69
CU928173_206(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 226 1e-68
(Q6BQ34) RecName: Full=rRNA 2'-O-methyltransferase fibrillarin; ... 224 1e-68
CR382129_595(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 225 2e-68
FM992691_590(FM992691|pid:none) Candida dubliniensis CD36 chromo... 223 4e-68
BX649607_59(BX649607|pid:none) Aspergillus fumigatus BAC pilot p... 222 1e-66
AF491875_1(AF491875|pid:none) Bos taurus fibrillarin (FBL) mRNA,... 216 2e-66
FN357400_2(FN357400|pid:none) Schistosoma mansoni genome sequenc... 218 6e-66
FN317919_1(FN317919|pid:none) Schistosoma japonicum isolate Anhu... 216 8e-66
AM502254_377(AM502254|pid:none) Leishmania infantum chromosome 36. 217 2e-65
CT005272_317(CT005272|pid:none) Leishmania major strain Friedlin... 217 3e-65
AM920431_1280(AM920431|pid:none) Penicillium chrysogenum Wiscons... 220 4e-65
AP007161_364(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 215 3e-64
AM269982_49(AM269982|pid:none) Aspergillus niger contig An01c035... 215 3e-64
CU640366_1287(CU640366|pid:none) Podospora anserina genomic DNA ... 211 8e-64
AE014187_65(AE014187|pid:none) Plasmodium falciparum 3D7 chromos... 215 1e-63
AK296950_1(AK296950|pid:none) Homo sapiens cDNA FLJ56738 complet... 206 1e-63
AF007112_1(AF007112|pid:none) Plasmodium falciparum fibrillarin ... 214 3e-63
EF125745_1(EF125745|pid:none) Nyctotherus ovalis fibrillarin gen... 218 8e-63
AC135426_13(AC135426|pid:none) Oryza sativa (japonica cultivar-g... 206 2e-62
CP000881_9(CP000881|pid:none) Hemiselmis andersenii chromosome 1... 206 2e-61
(Q8SR42) RecName: Full=rRNA 2'-O-methyltransferase fibrillarin; ... 196 2e-57
AF083031_93(AF083031|pid:none) Guillardia theta nucleomorph chro... 196 4e-57
AM502247_27(AM502247|pid:none) Leishmania infantum chromosome 29. 197 4e-56
(Q9FHB3) RecName: Full=Putative rRNA 2'-O-methyltransferase fibr... 194 5e-56
Z74061_1(Z74061|pid:none) S.cerevisiae chromosome IV reading fra... 211 3e-53
AB372538_1(AB372538|pid:none) Vitis hybrid cultivar Tamnara TamF... 210 6e-53
(Q24957) RecName: Full=rRNA 2'-O-methyltransferase fibrillarin; ... 186 6e-51
AK248129_1(AK248129|pid:none) Dugesia japonica mRNA for fibrilla... 176 4e-49
AK103477_1(AK103477|pid:none) Oryza sativa Japonica Group cDNA c... 150 2e-45
FN357400_3(FN357400|pid:none) Schistosoma mansoni genome sequenc... 129 3e-39
CP000300_1442(CP000300|pid:none) Methanococcoides burtonii DSM 6... 146 3e-38
CP001140_811(CP001140|pid:none) Desulfurococcus kamchatkensis 12... 140 8e-38
GM017008_298(GM017008|pid:none) Sequence 1838 from Patent EP1923... 137 1e-37
(Q8U4M2) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 136 1e-37
(B6YXH6) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 137 1e-37
(Q5JFN1) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 137 1e-37
CP001398_464(CP001398|pid:none) Thermococcus gammatolerans EJ3, ... 137 1e-37
BA000023_1367(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 142 2e-37
(Q9V2L5) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 134 3e-37
CP001401_1190(CP001401|pid:none) Sulfolobus islandicus M.16.27, ... 143 4e-37
CP001399_1227(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 143 4e-37
(O57811) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 135 5e-37
(Q8ZTI9) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 136 1e-36
(Q46EB1) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 141 3e-36
AM436404_1(AM436404|pid:none) Vitis vinifera contig VV78X261233.... 154 4e-36
(O53133) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 140 4e-36
(A4WKL2) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 132 9e-36
CP000968_1497(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 131 2e-35
(A3MV65) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 131 2e-35
CP000816_1409(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, c... 149 9e-35
(A9A6C8) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 127 4e-33
(A6VJQ1) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 125 2e-32
DQ516395_1(DQ516395|pid:none) Pristionchus pacificus fibrillarin... 142 2e-32
(A4FYN1) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 125 2e-32
AM114193_2829(AM114193|pid:none) Uncultured methanogenic archaeo... 134 2e-32
CP000102_1374(CP000102|pid:none) Methanosphaera stadtmanae DSM 3... 116 2e-31
(Q9HH35) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 114 9e-30
(O28192) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 123 2e-28
AE014297_1637(AE014297|pid:none) Drosophila melanogaster chromos... 114 3e-28
(A0B6X7) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 123 1e-27
CP000780_511(CP000780|pid:none) Candidatus Methanoregula boonei ... 116 6e-27
(Q5V3Q6) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 108 9e-26
(Q979P2) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 114 4e-24
(Q9HJL8) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 107 1e-23
CP000254_2188(CP000254|pid:none) Methanospirillum hungatei JF-1,... 104 6e-23
CP000559_1619(CP000559|pid:none) Methanocorpusculum labreanum Z,... 102 1e-22
CR936257_1026(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 105 2e-22
EF583985_20(EF583985|pid:none) Uncultured haloarchaeon clone fos... 94 5e-22
AM434466_1(AM434466|pid:none) Vitis vinifera contig VV78X232639.... 72 6e-21
CP001365_1033(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 103 8e-21
(Q6KZQ5) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 93 6e-20
AB236818_1(AB236818|pid:none) Trifolium pratense RNA for putativ... 84 8e-20
(Q9HQG3) RecName: Full=Fibrillarin-like rRNA/tRNA 2'-O-methyltra... 93 4e-18
AM180088_1635(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 93 1e-17
AP008208_2975(AP008208|pid:none) Oryza sativa (japonica cultivar... 89 2e-16
AF051743_1(AF051743|pid:none) Picea mariana fibrillarin (Sb21) g... 80 1e-13
BT077639_1(BT077639|pid:none) Lepeophtheirus salmonis Pacific fo... 62 3e-08
AF102879_1(AF102879|pid:none) Euglena gracilis fibrillarin gene,... 56 2e-06
AB027941_1(AB027941|pid:none) Schizosaccharomyces pombe gene for... 55 3e-06
EU016612_5(EU016612|pid:none) Uncultured marine microorganism HF... 38 3e-05
EU953940_1(EU953940|pid:none) Zea mays clone 1449921 unknown mRNA. 50 8e-05
AL163792_9(AL163792|pid:none) Arabidopsis thaliana DNA chromosom... 49 3e-04
(A0LGZ0) RecName: Full=Ribosomal RNA large subunit methyltransfe... 46 0.002
CP000975_47(CP000975|pid:none) Methylacidiphilum infernorum V4, ... 45 0.003
AE010299_4413(AE010299|pid:none) Methanosarcina acetivorans str.... 43 0.012
FN357449_30(FN357449|pid:none) Schistosoma mansoni genome sequen... 43 0.012
FN357449_28(FN357449|pid:none) Schistosoma mansoni genome sequen... 43 0.012
AM450058_1(AM450058|pid:none) Vitis vinifera contig VV78X108547.... 42 0.028
AY814811_1(AY814811|pid:none) Schistosoma japonicum clone SJCHGC... 42 0.036
FN314965_1(FN314965|pid:none) Schistosoma japonicum isolate Anhu... 42 0.036
FN314963_1(FN314963|pid:none) Schistosoma japonicum isolate Anhu... 42 0.036
CP001185_450(CP001185|pid:none) Thermosipho africanus TCF52B, co... 42 0.036
FN314964_1(FN314964|pid:none) Schistosoma japonicum isolate Anhu... 42 0.036
CP000463_2177(CP000463|pid:none) Rhodopseudomonas palustris BisA... 41 0.062
CP001140_1305(CP001140|pid:none) Desulfurococcus kamchatkensis 1... 40 0.11
CR762175_1(CR762175|pid:none) Xenopus tropicalis finished cDNA, ... 40 0.11
BC076660_1(BC076660|pid:none) Xenopus tropicalis MGC79558 protei... 40 0.11
AP009178_132(AP009178|pid:none) Nitratiruptor sp. SB155-2 genomi... 40 0.11
FN317583_1(FN317583|pid:none) Schistosoma japonicum isolate Anhu... 40 0.14
AY811900_1(AY811900|pid:none) Schistosoma japonicum SJCHGC05555 ... 40 0.14
CP001338_1072(CP001338|pid:none) Candidatus Methanosphaerula pal... 40 0.14
CP000820_1318(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 40 0.14
CP001102_1049(CP001102|pid:none) Candidatus Amoebophilus asiatic... 39 0.18
CP000716_217(CP000716|pid:none) Thermosipho melanesiensis BI429,... 39 0.18
BT045787_1(BT045787|pid:none) Salmo salar clone ssal-rgf-531-093... 39 0.18
CP001087_394(CP001087|pid:none) Desulfobacterium autotrophicum H... 39 0.24
(Q1D841) RecName: Full=Ribosomal RNA large subunit methyltransfe... 39 0.24
(A9N8M5) RecName: Full=Ribosomal RNA large subunit methyltransfe... 39 0.31
BC032332_1(BC032332|pid:none) Homo sapiens protein-L-isoaspartat... 39 0.31
(A9KGE6) RecName: Full=Ribosomal RNA large subunit methyltransfe... 39 0.31
BC040945_1(BC040945|pid:none) Homo sapiens protein-L-isoaspartat... 39 0.31
(Q5R7K4) RecName: Full=Protein-L-isoaspartate O-methyltransferas... 39 0.31
CP000115_1888(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 39 0.31
CP000509_4488(CP000509|pid:none) Nocardioides sp. JS614, complet... 38 0.40
(Q97WC7) RecName: Full=Probable cobalt-precorrin-6Y C(15)-methyl... 38 0.40
AB182640_1(AB182640|pid:none) Mus musculus mRNA for mKIAA3003 pr... 38 0.40
CT573071_157(CT573071|pid:none) Kuenenia stuttgartiensis genome ... 38 0.40
AK031335_1(AK031335|pid:none) Mus musculus 13 days embryo male t... 38 0.40
CP000249_4418(CP000249|pid:none) Frankia sp. CcI3, complete geno... 38 0.40
AL845173_16(AL845173|pid:none) Mouse DNA sequence from clone RP2... 38 0.40
BT076927_1(BT076927|pid:none) Caligus rogercresseyi clone crog-e... 38 0.40
FN357411_12(FN357411|pid:none) Schistosoma mansoni genome sequen... 38 0.52
CP000473_1515(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 38 0.52
CP000927_3363(CP000927|pid:none) Caulobacter sp. K31, complete g... 38 0.52
CP000494_4557(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 37 0.68
(Q92047) RecName: Full=Protein-L-isoaspartate(D-aspartate) O-met... 37 0.68
BC064801_1(BC064801|pid:none) Mus musculus protein-L-isoaspartat... 37 0.89
AK145008_1(AK145008|pid:none) Mus musculus mammary gland RCB-052... 37 0.89
(P59913) RecName: Full=Protein-L-isoaspartate O-methyltransferas... 37 0.89
(Q3IT24) RecName: Full=Ribosomal RNA large subunit methyltransfe... 37 0.89
(Q5R7E5) RecName: Full=Protein-L-isoaspartate O-methyltransferas... 37 0.89
AM236086_373(AM236086|pid:none) Rhizobium leguminosarum bv. vici... 37 0.89
AM746676_5632(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 37 0.89
(A9MBW8) RecName: Full=Ribosomal RNA large subunit methyltransfe... 37 1.2
CP001029_3580(CP001029|pid:none) Methylobacterium populi BJ001, ... 37 1.2
AE014292_661(AE014292|pid:none) Brucella suis 1330 chromosome II... 37 1.2
CP000709_566(CP000709|pid:none) Brucella ovis ATCC 25840 chromos... 37 1.2
CP001628_1235(CP001628|pid:none) Micrococcus luteus NCTC 2665, c... 37 1.2
CP001124_2025(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 37 1.2
CP000031_2000(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 37 1.2
BC081122_1(BC081122|pid:none) Xenopus laevis MGC83799 protein, m... 36 1.5
AE010299_2340(AE010299|pid:none) Methanosarcina acetivorans str.... 36 1.5
AM114193_1976(AM114193|pid:none) Uncultured methanogenic archaeo... 36 1.5
BC114315_1(BC114315|pid:none) Danio rerio zgc:136935, mRNA (cDNA... 36 1.5
CP001145_1394(CP001145|pid:none) Coprothermobacter proteolyticus... 36 1.5
CP000923_415(CP000923|pid:none) Thermoanaerobacter sp. X514, com... 36 2.0
CP001618_331(CP001618|pid:none) Beutenbergia cavernae DSM 12333,... 36 2.0
CT573213_2625(CT573213|pid:none) Frankia alni str. ACN14A chromo... 36 2.0
AM849034_1488(AM849034|pid:none) Clavibacter michiganensis subsp... 36 2.0
X66474_1(X66474|pid:none) R.norvegicus mRNA for guanylate kinase. 36 2.0
AM746676_6264(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 36 2.0
BA000040_4939(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 36 2.0
CP001032_3268(CP001032|pid:none) Opitutus terrae PB90-1, complet... 36 2.0
(O26915) RecName: Full=Protein-L-isoaspartate O-methyltransferas... 36 2.0
BC042219_1(BC042219|pid:none) Xenopus laevis hypothetical protei... 36 2.0
(A7H9A5) RecName: Full=Ribosomal RNA large subunit methyltransfe... 35 2.6
AE009948_765(AE009948|pid:none) Streptococcus agalactiae 2603V/R... 35 2.6
CP001192_292(CP001192|pid:none) Rhizobium leguminosarum bv. trif... 35 2.6
CP001338_1083(CP001338|pid:none) Candidatus Methanosphaerula pal... 35 2.6
AP009493_342(AP009493|pid:none) Streptomyces griseus subsp. gris... 35 2.6
CP000943_3594(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 35 2.6
BC096863_1(BC096863|pid:none) Danio rerio zgc:123165, mRNA (cDNA... 35 3.4
BC044686_1(BC044686|pid:none) Xenopus laevis similar to chromoso... 35 3.4
BC107952_1(BC107952|pid:none) Danio rerio zgc:123165, mRNA (cDNA... 35 3.4
(A6UWM1) RecName: Full=Protein-L-isoaspartate O-methyltransferas... 35 3.4
AL844504_96(AL844504|pid:none) Plasmodium falciparum 3D7 chromos... 35 3.4
(Q8PW90) RecName: Full=Protein-L-isoaspartate O-methyltransferas... 35 3.4
CP000606_2771(CP000606|pid:none) Shewanella loihica PV-4, comple... 35 4.4
AP008955_3728(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 35 4.4
(A8AAV7) RecName: Full=Protein-L-isoaspartate O-methyltransferas... 35 4.4
CP000924_497(CP000924|pid:none) Thermoanaerobacter pseudethanoli... 35 4.4
AF282475_2(AF282475|pid:none) Eyach virus segment 9, complete se... 35 4.4
CP000820_5121(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 35 4.4
CP000360_2840(CP000360|pid:none) Acidobacteria bacterium Ellin34... 35 4.4
CP001365_341(CP001365|pid:none) Halorubrum lacusprofundi ATCC 49... 35 4.4
AF282475_1(AF282475|pid:none) Eyach virus segment 9, complete se... 35 4.4
AL442104_5(AL442104|pid:none) Oryza sativa genomic DNA, chromoso... 35 4.4
CU234118_3969(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 35 4.4
AM711867_1487(AM711867|pid:none) Clavibacter michiganensis subsp... 34 5.8
(Q8TT93) RecName: Full=Protein-L-isoaspartate O-methyltransferas... 34 5.8
CR761105_1(CR761105|pid:none) Xenopus tropicalis finished cDNA, ... 34 5.8
AE008691_1995(AE008691|pid:none) Thermoanaerobacter tengcongensi... 34 5.8
AM746676_3047(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 34 5.8
(Q18E61) RecName: Full=Ribosomal RNA large subunit methyltransfe... 34 5.8
CP000860_1418(CP000860|pid:none) Candidatus Desulforudis audaxvi... 34 5.8
CP001365_1565(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 34 5.8
CP001032_299(CP001032|pid:none) Opitutus terrae PB90-1, complete... 34 5.8
CP000850_2530(CP000850|pid:none) Salinispora arenicola CNS-205, ... 34 5.8
CP000923_956(CP000923|pid:none) Thermoanaerobacter sp. X514, com... 34 5.8
(Q9URZ1) RecName: Full=Probable protein-L-isoaspartate O-methylt... 34 7.6
CP000099_3049(CP000099|pid:none) Methanosarcina barkeri str. Fus... 34 7.6
CP000141_538(CP000141|pid:none) Carboxydothermus hydrogenoforman... 34 7.6
AK105549_1(AK105549|pid:none) Oryza sativa Japonica Group cDNA c... 34 7.6
CR954207_250(CR954207|pid:none) Ostreococcus tauri strain OTTH05... 34 7.6
BT035170_1(BT035170|pid:none) Zea mays full-length cDNA clone ZM... 34 7.6
EU971733_1(EU971733|pid:none) Zea mays clone 369766 protein-L-is... 34 7.6
CP000248_749(CP000248|pid:none) Novosphingobium aromaticivorans ... 34 7.6
CP001039_193(CP001039|pid:none) Nostoc punctiforme PCC 73102 pla... 34 7.6
AM502246_251(AM502246|pid:none) Leishmania infantum chromosome 28. 34 7.6
CP000908_3658(CP000908|pid:none) Methylobacterium extorquens PA1... 33 9.9
T09599(T09599) postsynaptic density protein 95 - human &U83192_... 33 9.9
(P78352) RecName: Full=Disks large homolog 4; AltName: Full=Post... 33 9.9
(Q11L51) RecName: Full=Ribosomal RNA large subunit methyltransfe... 33 9.9
AK297346_1(AK297346|pid:none) Homo sapiens cDNA FLJ50577 complet... 33 9.9
AK299801_1(AK299801|pid:none) Homo sapiens cDNA FLJ50646 complet... 33 9.9
AF028825_1(AF028825|pid:none) Homo sapiens Tax interaction prote... 33 9.9
BA000040_7569(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 33 9.9
(Q8TT94) RecName: Full=Protein-L-isoaspartate O-methyltransferas... 33 9.9
FB823526_1(FB823526|pid:none) Sequence 42799 from Patent WO20080... 33 9.9
CP000774_2282(CP000774|pid:none) Parvibaculum lavamentivorans DS... 33 9.9
BC124910_1(BC124910|pid:none) Xenopus laevis cDNA clone IMAGE:70... 33 9.9
AJ786383_4(AJ786383|pid:none) Streptomyces chartreusis HKI-249 c... 33 9.9
CP000450_308(CP000450|pid:none) Nitrosomonas eutropha C91, compl... 33 9.9
BT076726_1(BT076726|pid:none) Caligus rogercresseyi clone crog-e... 33 9.9
CP000855_1346(CP000855|pid:none) Thermococcus onnurineus NA1, co... 33 9.9
L35560_9(L35560|pid:none) Streptomyces peucetius daunorubicin-do... 33 9.9
AF039306_2(AF039306|pid:none) Bradyrhizobium japonicum putative ... 33 9.9
BC084479_1(BC084479|pid:none) Xenopus tropicalis hypothetical LO... 33 9.9
FM177140_2704(FM177140|pid:none) Lactobacillus casei BL23 comple... 33 9.9
>(Q55CW0) RecName: Full=rRNA 2'-O-methyltransferase fibrillarin;
EC=2.1.1.-;
Length = 334
Score = 328 bits (841), Expect(2) = e-108
Identities = 165/168 (98%), Positives = 167/168 (99%)
Frame = +3
Query: 375 KIHIKPGSKVLYIGAASGTTISHVSDIVGPTGVVYGIELSHRPGRDLIGMAKKRTNVIPI 554
+IHIKPGSKVLYIGAASGTTISHVSDIVGPTGVVYGIELSHRPGRDLIGMAKKRTNVIPI
Sbjct: 166 EIHIKPGSKVLYIGAASGTTISHVSDIVGPTGVVYGIELSHRPGRDLIGMAKKRTNVIPI 225
Query: 555 IEDARHPQKYRMLIGMVDVVFADVAQPNQAQIVAQNSAYFLKNEGHFIISIKASCIDSTA 734
IEDARHPQKYRMLIGMVDVVFADVAQPNQAQIVAQNSAYFLKNEGHFIISIKASCIDSTA
Sbjct: 226 IEDARHPQKYRMLIGMVDVVFADVAQPNQAQIVAQNSAYFLKNEGHFIISIKASCIDSTA 285
Query: 735 PTEVVVQNEITKLKKEKLRPQHLLKTLDPYERNHSLVIGVYRKXGSSK 878
PTEVVVQNEITKLKKEKLRPQHLLKTLDPYERNHSLVIGVYRK GSS+
Sbjct: 286 PTEVVVQNEITKLKKEKLRPQHLLKTLDPYERNHSLVIGVYRKFGSSE 333
Score = 87.4 bits (215), Expect(2) = e-108
Identities = 45/55 (81%), Positives = 45/55 (81%), Gaps = 10/55 (18%)
Frame = +2
Query: 242 RGKEESLATLNSVPGESVY----------EDKKEYRIWNPFRSKIAAGLHRGVDE 376
RGKEESLATLNSVPGESVY EDKKEYRIWNPFRSKIAAGLHRGVDE
Sbjct: 112 RGKEESLATLNSVPGESVYGEKRVSVGEGEDKKEYRIWNPFRSKIAAGLHRGVDE 166
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,174,197,631
Number of extensions: 22233101
Number of successful extensions: 54806
Number of sequences better than 10.0: 254
Number of HSP's gapped: 54585
Number of HSP's successfully gapped: 357
Length of query: 295
Length of database: 1,061,185,681
Length adjustment: 128
Effective length of query: 167
Effective length of database: 642,824,337
Effective search space: 107351664279
Effective search space used: 107351664279
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
1 |
| VH (FL, L) |
0 |
| VF (FL, S) |
1 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
1 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |