Contig-U16177-1
Contig ID Contig-U16177-1
Contig update 2004. 6.11
Contig sequence
>Contig-U16177-1 (Contig-U16177-1Q) /CSM_Contig/Contig-U16177-1Q.Seq.d
AATAAATAAATAGTATTGTATTATTAATAATTAAATAATAATATTATAAA
ATGAATATTGAATTAATTAATACAAATGAAAGATTTATATTAATAAATAA
TGGTAATAAAGATAAATCATTAAATATTGATAAACATTCAGTTAAAGCTA
GTATTAGTGTTGGTGTACCAAAAAATAATGAAAAGGTTTTAACAAGAATT
GAAAATGTTAAAGGTATAATCGGTTGTATTCAATTGGTATCAGGTCATTA
TTTAATGATATTCAAAGAACATAATCATGTTGCAACTGTGACAGGTAAGA
AAATCTATCAAATGAAAGATGTCGAATTGATTCCATTCTTTCCAAATCAG
CAATCACTAGTATCAATCCCCGATCAAGATGCCGAGGAACAACATTTATC
GATGATTAGATGGTTATTGTCGTCAGAGAATTTCTATTTCTCATATGACT
ATGATTTCACTCTTACACTTCAAAGACAGTATTCAACCACCACCACCACC
ACAAGCGGATCGTCATTAGGCGAGCGTTGTGATTCACGTTTCTTTTGGAA
CGAAAAGTATGTTACAATTTTAAGTAAAGAGCATGGTTTGGGTGACTGGA
T----------TGTACTGGAGCTTCTATACACCAACCATGTCATCCAAGT
TCATCAAACCAGGTAGATTAGTAATCCTCTTAAACGGTAAATACGCCGGT
CGTAAGGCTGTTGTCATCAAGACCTTCGATGATGCCACCGCAAGCAAATC
AAGACCATACGGCCACTGTTTAGTTGCTGGTATCGACAAATACCCACGTT
CAATCGTTAGATCAATGAGCAGAAAGACCATCCTCAAACGTACTGCCATC
CGTTCATTTGTTAAAGTCGTCAATTACAACCACATCATGCCAACCCGTTA
CAACTTTGAAGGTCGTGATGAATCTGCCTTCACTGGTCTCAAAAACACCG
TCACTGTTGAAAGCTCACAAGTCGCCAAACGTGCTCACACTCGTTTAGCC
GTCAAAAAGATCTTTGAAGCCAAACACAAAGCTGGTAAATCAAAATGGTT
CTTCTCTAAATTAAGATTCTAAATTATCTTTTTATAATAAATTTGTTTCT
TTAAAAAATATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA

Gap gap included
Contig length 1151
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 563475
End point 564145
Strand (PLUS/MINUS) PLUS
Number of clones 11
Number of EST 15
Link to clone list U16177
List of clone(s)

est1=VFJ378F,1,601
est2=VFJ378Z,602,1040
est3=VHM802Z,602,902
est4=VFL369F,610,1111
est5=VFL369Z,610,1099
est6=VHM550F,610,1109
est7=VHM550Z,610,1072
est8=SSJ556E,623,1151
est9=FC-AB06E,625,1123
est10=FC-BM23E,628,1104
est11=SSI266E,632,1106
est12=VSB706Z,703,1148
est13=SLK886E,774,1101
est14=VSF583F,930,1123
est15=VSF583Z,930,1096
Translated Amino Acid sequence
*insivlliik**YYKMNIELINTNERFILINNGNKDKSLNIDKHSVKASISVGVPKNNE
KVLTRIENVKGIIGCIQLVSGHYLMIFKEHNHVATVTGKKIYQMKDVELIPFFPNQQSLV
SIPDQDAEEQHLSMIRWLLSSENFYFSYDYDFTLTLQRQYSTTTTTTSGSSLGERCDSRF
FWNEKYVTILSKEHGLGDW---

---YWSFYTPTMSSKFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGI
DKYPRSIVRSMSRKTILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVES
SQVAKRAHTRLAVKKIFEAKHKAGKSKWFFSKLRF*iifl**icffkkykkkkkkkkkkk
kkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
nk*ivlyy**lnnniik*iln*liqmkdly**imvikinh*iliniqlklvlvlvyqkim
krf*qelkmlkv*svvfnwyqvii**yskniimlql*qvrksik*kmsn*fhsfqisnh*
yqspikmprnniyr*ldgycrqrisishmtmisllhfkdsiqpppppqadrh*asvvihv
sfgtksmlqf*vksmvwvtg---

---ctgasihqpchpsssnqvd**ss*tvntpvvrllssrpsmmppqanqdhtatv*llv
stnthvqsldq*aerpssnvlpsvhllkssitttscqpvttlkvvmnlpslvsktpsllk
ahkspnvltlv*pskrslkpntklvnqngssln*dsklsfynkfvslknikkkkkkkkkk
kkkkkk

Frame B:
ink*yciinn*iiil*ney*in*yk*kiyink*w**r*iiky**tfs*s*y*cwctkk**
kgfnkn*kc*rynrlysigirslfndiqrt*sccncdr*enlsnercridsilsksaits
inprsrcrgttfidd*mvivvreflfli*l*fhsytsktvfnhhhhhkrivirral*ftf
llerkvcynfk*rawfg*ld---

---vlellytnhviqvhqtr*isnplkr*irrs*gcchqdlr*chrkqiktirplfscwy
rqiptfnr*ineqkdhpqtychpfic*srqlqphhanplql*rs**iclhwsqkhrhc*k
ltsrqtcshsfsrqkdl*sqtqsw*ikmvll*ikilnylfiinlfl*ki*kkkkkkkkkk
kkkkkk

Frame C:
*insivlliik**YYKMNIELINTNERFILINNGNKDKSLNIDKHSVKASISVGVPKNNE
KVLTRIENVKGIIGCIQLVSGHYLMIFKEHNHVATVTGKKIYQMKDVELIPFFPNQQSLV
SIPDQDAEEQHLSMIRWLLSSENFYFSYDYDFTLTLQRQYSTTTTTTSGSSLGERCDSRF
FWNEKYVTILSKEHGLGDW---

---YWSFYTPTMSSKFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGI
DKYPRSIVRSMSRKTILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVES
SQVAKRAHTRLAVKKIFEAKHKAGKSKWFFSKLRF*iifl**icffkkykkkkkkkkkkk
kkkkk

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U16177-1 (Contig-U16177-1Q)
/CSM_Contig/Contig-U16177-1Q.Seq.d
(1161 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U16177-1 (Contig-U16177-1Q) /CSM_Contig/Conti... 1148 0.0
Contig-U15972-1 (Contig-U15972-1Q) /CSM_Contig/Conti... 38 0.030
Contig-U08927-1 (Contig-U08927-1Q) /CSM_Contig/Conti... 38 0.030
Contig-U15581-1 (Contig-U15581-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U12145-1 (Contig-U12145-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U08919-1 (Contig-U08919-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U04913-1 (Contig-U04913-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U04432-1 (Contig-U04432-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U03395-1 (Contig-U03395-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U16508-1 (Contig-U16508-1Q) /CSM_Contig/Conti... 34 0.46

>Contig-U16177-1 (Contig-U16177-1Q) /CSM_Contig/Contig-U16177-1Q.Seq.d
Length = 1161

Score = 1148 bits (579), Expect = 0.0
Identities = 609/609 (100%)
Strand = Plus / Plus


Query: 503 aagcggatcgtcattaggcgagcgttgtgattcacgtttcttttggaacgaaaagtatgt 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aagcggatcgtcattaggcgagcgttgtgattcacgtttcttttggaacgaaaagtatgt 562


Query: 563 tacaattttaagtaaagagcatggtttgggtgactggatnnnnnnnnnntgtactggagc 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tacaattttaagtaaagagcatggtttgggtgactggatnnnnnnnnnntgtactggagc 622


Query: 623 ttctatacaccaaccatgtcatccaagttcatcaaaccaggtagattagtaatcctctta 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttctatacaccaaccatgtcatccaagttcatcaaaccaggtagattagtaatcctctta 682


Query: 683 aacggtaaatacgccggtcgtaaggctgttgtcatcaagaccttcgatgatgccaccgca 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aacggtaaatacgccggtcgtaaggctgttgtcatcaagaccttcgatgatgccaccgca 742


Query: 743 agcaaatcaagaccatacggccactgtttagttgctggtatcgacaaatacccacgttca 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 agcaaatcaagaccatacggccactgtttagttgctggtatcgacaaatacccacgttca 802


Query: 803 atcgttagatcaatgagcagaaagaccatcctcaaacgtactgccatccgttcatttgtt 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 atcgttagatcaatgagcagaaagaccatcctcaaacgtactgccatccgttcatttgtt 862


Query: 863 aaagtcgtcaattacaaccacatcatgccaacccgttacaactttgaaggtcgtgatgaa 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 aaagtcgtcaattacaaccacatcatgccaacccgttacaactttgaaggtcgtgatgaa 922


Query: 923 tctgccttcactggtctcaaaaacaccgtcactgttgaaagctcacaagtcgccaaacgt 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 tctgccttcactggtctcaaaaacaccgtcactgttgaaagctcacaagtcgccaaacgt 982


Query: 983 gctcacactcgtttagccgtcaaaaagatctttgaagccaaacacaaagctggtaaatca 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 gctcacactcgtttagccgtcaaaaagatctttgaagccaaacacaaagctggtaaatca 1042


Query: 1043 aaatggttcttctctaaattaagattctaaattatctttttataataaatttgtttcttt 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 aaatggttcttctctaaattaagattctaaattatctttttataataaatttgtttcttt 1102


Query: 1103 aaaaaatat 1111
|||||||||
Sbjct: 1103 aaaaaatat 1111


Score = 773 bits (390), Expect = 0.0
Identities = 390/390 (100%)
Strand = Plus / Plus


Query: 96 aataatggtaataaagataaatcattaaatattgataaacattcagttaaagctagtatt 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 aataatggtaataaagataaatcattaaatattgataaacattcagttaaagctagtatt 155


Query: 156 agtgttggtgtaccaaaaaataatgaaaaggttttaacaagaattgaaaatgttaaaggt 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 agtgttggtgtaccaaaaaataatgaaaaggttttaacaagaattgaaaatgttaaaggt 215


Query: 216 ataatcggttgtattcaattggtatcaggtcattatttaatgatattcaaagaacataat 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ataatcggttgtattcaattggtatcaggtcattatttaatgatattcaaagaacataat 275


Query: 276 catgttgcaactgtgacaggtaagaaaatctatcaaatgaaagatgtcgaattgattcca 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 catgttgcaactgtgacaggtaagaaaatctatcaaatgaaagatgtcgaattgattcca 335


Query: 336 ttctttccaaatcagcaatcactagtatcaatccccgatcaagatgccgaggaacaacat 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ttctttccaaatcagcaatcactagtatcaatccccgatcaagatgccgaggaacaacat 395


Query: 396 ttatcgatgattagatggttattgtcgtcagagaatttctatttctcatatgactatgat 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ttatcgatgattagatggttattgtcgtcagagaatttctatttctcatatgactatgat 455


Query: 456 ttcactcttacacttcaaagacagtattca 485
||||||||||||||||||||||||||||||
Sbjct: 456 ttcactcttacacttcaaagacagtattca 485


>Contig-U15972-1 (Contig-U15972-1Q) /CSM_Contig/Contig-U15972-1Q.Seq.d
Length = 855

Score = 38.2 bits (19), Expect = 0.030
Identities = 19/19 (100%)
Strand = Plus / Minus


Query: 120 ttaaatattgataaacatt 138
|||||||||||||||||||
Sbjct: 244 ttaaatattgataaacatt 226


>Contig-U08927-1 (Contig-U08927-1Q) /CSM_Contig/Contig-U08927-1Q.Seq.d
Length = 1213

Score = 38.2 bits (19), Expect = 0.030
Identities = 22/23 (95%)
Strand = Plus / Minus


Query: 1073 attatctttttataataaatttg 1095
||||||||||| |||||||||||
Sbjct: 842 attatctttttttaataaatttg 820


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,622
Number of Sequences: 8402
Number of extensions: 14622
Number of successful extensions: 1705
Number of sequences better than 10.0: 193
length of query: 1161
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1145
effective length of database: 7,941,110
effective search space: 9092570950
effective search space used: 9092570950
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 3.20
Homology vs DNA
Query= Contig-U16177-1 (Contig-U16177-1Q) /CSM_Contig/Contig-U16177-1Q.Seq.d
(1161 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 708 0.0 2
(BJ414629) Dictyostelium discoideum cDNA clone:ddv19l19, 5' ... 708 0.0 2
(BJ434012) Dictyostelium discoideum cDNA clone:ddv23j17, 3' ... 866 0.0 1
(BJ425683) Dictyostelium discoideum cDNA clone:ddv56c13, 5' ... 866 0.0 1
(BJ415757) Dictyostelium discoideum cDNA clone:ddv23j17, 5' ... 866 0.0 1
(BJ444480) Dictyostelium discoideum cDNA clone:ddv56c13, 3' ... 844 0.0 1
(C90647) Dictyostelium discoideum slug cDNA, clone SSI266. 815 0.0 1
(C23672) Dictyostelium discoideum gamete cDNA, clone FC-AB06. 561 0.0 2
(AU284841) Dictyostelium discoideum gamete cDNA clone:FC-BM2... 793 0.0 1
(C91004) Dictyostelium discoideum slug cDNA, clone SSJ556. 789 0.0 1
(AU262187) Dictyostelium discoideum vegetative cDNA clone:VS... 680 0.0 1
(BJ444331) Dictyostelium discoideum cDNA clone:ddv56d02, 3' ... 585 e-162 1
(AU054184) Dictyostelium discoideum slug cDNA, clone SLK886. 515 e-141 1
(AU060680) Dictyostelium discoideum slug cDNA, clone SLK886. 513 e-141 1
(AU074119) Dictyostelium discoideum slug cDNA, clone SSJ556. 476 e-130 1
(BJ432805) Dictyostelium discoideum cDNA clone:ddv19l19, 3' ... 369 2e-97 1
(AU265462) Dictyostelium discoideum vegetative cDNA clone:VS... 232 2e-56 1
(AU265461) Dictyostelium discoideum vegetative cDNA clone:VS... 232 2e-56 1
(EC761082) PSE00006879 rw_mgpallid Polysphondylium pallidum ... 70 6e-31 3
(EC762363) PSE00002380 rw_mgpallid Polysphondylium pallidum ... 70 1e-21 3
(EC760693) PSE00008329 rw_mgpallid Polysphondylium pallidum ... 70 7e-18 2
(EC761809) PSE00002512 rw_mgpallid Polysphondylium pallidum ... 70 2e-07 1
(EH614324) EST_CSP005xl17f1.ab1 EST_CSP Nicotiana tabacum cD... 56 2e-06 2
(EH614070) EST_CSP004xh24f1.ab1 EST_CSP Nicotiana tabacum cD... 56 2e-06 2
(EH614133) EST_CSP005xg09f1.ab1 EST_CSP Nicotiana tabacum cD... 56 2e-06 2
(EH614093) EST_CSP004xn14f1.ab1 EST_CSP Nicotiana tabacum cD... 56 2e-06 2
(EH614162) EST_CSP005xm05f1.ab1 EST_CSP Nicotiana tabacum cD... 56 2e-06 2
(EH614161) EST_CSP005xm03f1.ab1 EST_CSP Nicotiana tabacum cD... 56 2e-06 2
(EH615060) EST_CSP008xe14f1.ab1 EST_CSP Nicotiana tabacum cD... 56 2e-06 2
(EH615033) EST_CSP008xi21f1.ab1 EST_CSP Nicotiana tabacum cD... 56 3e-06 2
(EH615079) EST_CSP008xh11f1.ab1 EST_CSP Nicotiana tabacum cD... 56 3e-06 2
(EB678628) KG9B.105A23F.051128T7 KG9B Nicotiana tabacum cDNA... 56 3e-06 2
(DW002657) KR3B.103I22F.051108T7 KR3B Nicotiana tabacum cDNA... 56 4e-06 2
(EB430929) KL5B.111D13F.060117T7 KL5B Nicotiana tabacum cDNA... 56 4e-06 2
(EB683923) KR3B.113O03F.060119T7 KR3B Nicotiana tabacum cDNA... 56 4e-06 2
(EB693662) NecGex_038C09 Ornamental tobacco (LxS8) Stage 12 ... 56 4e-06 2
(EB694745) NecGex_057G06 Ornamental tobacco (LxS8) Stage 12 ... 56 4e-06 2
(EB683317) KR3B.112D18F.060119T7 KR3B Nicotiana tabacum cDNA... 56 4e-06 2
(EB695622) NecGex_070A02 Ornamental tobacco (LxS8) Stage 12 ... 56 4e-06 2
(BQ588323) E012308-024-008-F12-SP6 MPIZ-ADIS-024-leaf Beta v... 54 4e-05 2
(BQ592162) E012696-024-021-K06-SP6 MPIZ-ADIS-024-developing ... 50 5e-05 2
(FG343236) SF_90-208R Bv_T0 Beta vulgaris subsp. vulgaris cD... 54 5e-05 2
(CV301618) MM10_C09 Young roots probed with 3 week old root ... 54 5e-05 2
(EG552289) MM04F20_RP Sugar Beet germination cDNA library Be... 54 5e-05 2
(EG552173) MM04F20_XP Sugar Beet germination cDNA library Be... 54 5e-05 2
(EG550439) MM05K02_XP Sugar Beet germination cDNA library Be... 54 5e-05 2
(FG345004) SF_08-e01 Bv_T1 Beta vulgaris subsp. vulgaris cDN... 50 5e-05 2
(EG550473) MM05E02_XP Sugar Beet germination cDNA library Be... 54 6e-05 2
(EG549541) MM02G05_RP Sugar Beet germination cDNA library Be... 54 1e-04 2
(EG550815) MM01B03_RP Sugar Beet germination cDNA library Be... 54 1e-04 2
(EG549435) MM01B03_XP Sugar Beet germination cDNA library Be... 54 1e-04 2
(EG550810) MM01F05_RP Sugar Beet germination cDNA library Be... 54 1e-04 2
(EG012316) STDB003A10u STDB Solanum tuberosum cDNA clone STD... 48 2e-04 2
(EL775684) PUNC685TV Pythium ultimum ESTs Pythium ultimum DA... 60 2e-04 1
(EG552600) MM01M11_XP Sugar Beet germination cDNA library Be... 60 2e-04 1
(FF059142) 493450_1511_0151 Pythium ultimum ESTs Pythium ult... 60 2e-04 1
(FF053218) 452403_1909_2171 Pythium ultimum ESTs Pythium ult... 60 2e-04 1
(FF049733) 434518_0493_1332 Pythium ultimum ESTs Pythium ult... 60 2e-04 1
(FF042382) 401333_1762_1091 Pythium ultimum ESTs Pythium ult... 60 2e-04 1
(FE975290) 053194_1552_3394 Pythium ultimum ESTs Pythium ult... 60 2e-04 1
(FH336373) CHO_OF4592xo06r1.ab1 CHO_OF4 Nicotiana tabacum ge... 48 6e-04 2
(EB691143) NecGex_177A10 Ornamental tobacco (LxS8) Stage 6 F... 48 7e-04 2
(EB690714) NecGex_156E04 Ornamental tobacco (LxS8) Stage 6 F... 48 7e-04 2
(AU261665) Dictyostelium discoideum vegetative cDNA clone:VS... 58 8e-04 1
(DW004890) KR3B.109P24F.051111T7 KR3B Nicotiana tabacum cDNA... 48 8e-04 2
(EH623315) CHO_SL014xi07f1.ab1 CHO_SL Nicotiana tabacum cDNA... 48 8e-04 2
(EB434819) TL13.108F13F.060315T7 TL13 Nicotiana tabacum cDNA... 48 8e-04 2
(EB429072) KL5B.001D15F.050901T7 KL5B Nicotiana tabacum cDNA... 48 8e-04 2
(FH129815) CHO_OF3500xo11f1.ab1 CHO_OF3 Nicotiana tabacum ge... 48 0.001 2
(AM824840) Nicotiana tabacum EST, clone nt002307053. 56 0.003 1
(CB080831) qp48g09.b1 Hedyotis terminalis flower - Stage 2 (... 56 0.003 1
(EC634451) AME00005444 Allomyces macrogynus Company Allomyce... 42 0.009 2
(EC634170) AME00000974 Allomyces macrogynus Company Allomyce... 42 0.009 2
(EC635863) AME00005576 Regular, Homemade 1-5kb (lib2_am) All... 42 0.009 2
(EG549641) MM02G05_XP Sugar Beet germination cDNA library Be... 54 0.012 1
(DW710854) EST034335 Trichophyton rubrum cDNA library 8 Tric... 54 0.012 1
(DW707391) EST030872 Trichophyton rubrum cDNA library 7 Tric... 54 0.012 1
(DW707249) EST030730 Trichophyton rubrum cDNA library 7 Tric... 54 0.012 1
(DW704875) EST028356 Trichophyton rubrum cDNA library 7 Tric... 54 0.012 1
(DW703665) EST027146 Trichophyton rubrum cDNA library 7 Tric... 54 0.012 1
(DW702318) EST025799 Trichophyton rubrum cDNA library 7 Tric... 54 0.012 1
(DW698497) EST021978 Trichophyton rubrum cDNA library 6 Tric... 54 0.012 1
(DW697875) EST021356 Trichophyton rubrum cDNA library 6 Tric... 54 0.012 1
(DW697345) EST020826 Trichophyton rubrum cDNA library 6 Tric... 54 0.012 1
(DW696350) EST019831 Trichophyton rubrum cDNA library 5 Tric... 54 0.012 1
(DW694551) EST018032 Trichophyton rubrum cDNA library 4 Tric... 54 0.012 1
(DW693512) EST016993 Trichophyton rubrum cDNA library 3 Tric... 54 0.012 1
(DW691111) EST014592 Trichophyton rubrum cDNA library 2 Tric... 54 0.012 1
(DW685934) EST009415 Trichophyton rubrum cDNA library 1 Tric... 54 0.012 1
(DW680003) EST003484 Trichophyton rubrum cDNA library 0 Tric... 54 0.012 1
(DW679605) EST003086 Trichophyton rubrum cDNA library 0 Tric... 54 0.012 1
(DW678597) EST002078 Trichophyton rubrum cDNA library 0 Tric... 54 0.012 1
(DW407135) EST001556 Trichophyton rubrum cDNA library Tricho... 54 0.012 1
(CV017109) tbt_010701 Normalized Nicotiana tabacum cDNA libr... 42 0.020 2
(BT031414) Phytophthora capsici clone CBOT109-D05 mRNA seque... 52 0.048 1
(AC216701) Solanum lycopersicum chromosome 7 clone C07SLe010... 52 0.048 1
(EG554007) to00238 Tomato CL5915 roots under different devel... 52 0.048 1
(EG553491) to01520 Tomato CL5915 roots under different devel... 52 0.048 1
(EG552937) to00145 Tomato CL5915 roots under different devel... 52 0.048 1
(EG012134) STDB003L16u STDB Solanum tuberosum cDNA clone STD... 52 0.048 1
(DY332350) OB_MEa0008D08.r OB_MEa Ocimum basilicum cDNA clon... 52 0.048 1
(DY332349) OB_MEa0008D08.f OB_MEa Ocimum basilicum cDNA clon... 52 0.048 1
(DB725219) Solanum lycopersicum cDNA, clone: LEFL2048M15, 5'... 52 0.048 1
(CV967046) PC016E11 infected tomato, center of lesion 3 dpi ... 52 0.048 1
(CV965704) PC026F09 infected tomato, center of lesion 3 dpi ... 52 0.048 1
(CV960835) PYrpcy_5750 mycelium, Plich medium Phytophthora i... 52 0.048 1
(CV960416) PXrpxc_8849 mycelium, starved in water Phytophtho... 52 0.048 1
(CV960399) PXrpxc_8829 mycelium, starved in water Phytophtho... 52 0.048 1
(CV959791) PXrpxc_8033 mycelium, starved in water Phytophtho... 52 0.048 1
(CV959251) PXrpxc_7072 mycelium, starved in water Phytophtho... 52 0.048 1
(CV958926) PXrpxc_6680 mycelium, starved in water Phytophtho... 52 0.048 1
(CV958921) PXrpxc_6675 mycelium, starved in water Phytophtho... 52 0.048 1
(CV958356) PXrpxc_5990 mycelium, starved in water Phytophtho... 52 0.048 1
(CV958149) PXrpxc_5754 mycelium, starved in water Phytophtho... 52 0.048 1
(CV957353) PXrpxc_4717 mycelium, starved in water Phytophtho... 52 0.048 1
(CV957056) PXrpxc_4384 mycelium, starved in water Phytophtho... 52 0.048 1
(CV956825) PXrpxc_4131 mycelium, starved in water Phytophtho... 52 0.048 1
(CV955588) PXrpxc_2563 mycelium, starved in water Phytophtho... 52 0.048 1
(CV955477) PXrpxc_2420 mycelium, starved in water Phytophtho... 52 0.048 1
(CV955041) PXrpxc_1890 mycelium, starved in water Phytophtho... 52 0.048 1
(CV954278) PXrpxc_0979 mycelium, starved in water Phytophtho... 52 0.048 1
(CV954191) PXrpxc_0673 mycelium, starved in water Phytophtho... 52 0.048 1
(CV953623) PWrpwa_0324 mycelium, infection mimic Phytophthor... 52 0.048 1
(CV953441) PWrpwa_0120 mycelium, infection mimic Phytophthor... 52 0.048 1
(CV952634) PVrpvb_7003 zoospores, purified Phytophthora infe... 52 0.048 1
(CV952158) PVrpvb_6211 zoospores, purified Phytophthora infe... 52 0.048 1
(CV952143) PVrpvb_5992 zoospores, purified Phytophthora infe... 52 0.048 1
(CV951762) PVrpvb_5553 zoospores, purified Phytophthora infe... 52 0.048 1
(CV950969) PVrpvb_4554 zoospores, purified Phytophthora infe... 52 0.048 1
(CV950585) PVrpvb_3919 zoospores, purified Phytophthora infe... 52 0.048 1
(CV949970) PVrpvb_3153 zoospores, purified Phytophthora infe... 52 0.048 1
(CV948539) PVrpvb_12024 zoospores, purified Phytophthora inf... 52 0.048 1
(CV948228) PVrpvb_11670 zoospores, purified Phytophthora inf... 52 0.048 1
(CV947621) PVrpvb_10904 zoospores, purified Phytophthora inf... 52 0.048 1
(CV947309) PVrpvb_10464 zoospores, purified Phytophthora inf... 52 0.048 1
(CV947296) PVrpvb_10450 zoospores, purified Phytophthora inf... 52 0.048 1
(CV946925) PVrpvb_10005 zoospores, purified Phytophthora inf... 52 0.048 1
(CV946822) PVrpvb_0587 zoospores, purified Phytophthora infe... 52 0.048 1
(CV941773) PMrpct_4329 mating of 88069 (A1) and 618 (A2) Phy... 52 0.048 1
(CV940985) PMrpct_3321 mating of 88069 (A1) and 618 (A2) Phy... 52 0.048 1
(CV940799) PMrpct_3118 mating of 88069 (A1) and 618 (A2) Phy... 52 0.048 1
(CV939535) PMrpct_1124 mating of 88069 (A1) and 618 (A2) Phy... 52 0.048 1
(CV937659) PMrpcm_7487 mating of 88069 (A1) and 618 (A2) Phy... 52 0.048 1
(CV937098) PMrpcm_6829 mating of 88069 (A1) and 618 (A2) Phy... 52 0.048 1
(CV937092) PMrpcm_6822 mating of 88069 (A1) and 618 (A2) Phy... 52 0.048 1
(CV936882) PMrpcm_6467 mating of 88069 (A1) and 618 (A2) Phy... 52 0.048 1
(CV936154) PMrpcm_5513 mating of 88069 (A1) and 618 (A2) Phy... 52 0.048 1
(CV936132) PMrpcm_5486 mating of 88069 (A1) and 618 (A2) Phy... 52 0.048 1
(CV931930) PM060H2 mating of 88069 (A1) and 618 (A2) Phytoph... 52 0.048 1
(CV931871) PM060C1 mating of 88069 (A1) and 618 (A2) Phytoph... 52 0.048 1
(CV931035) PM049D1 mating of 88069 (A1) and 618 (A2) Phytoph... 52 0.048 1
(CV930446) PM041F10 mating of 88069 (A1) and 618 (A2) Phytop... 52 0.048 1
(CV929166) PM024E4 mating of 88069 (A1) and 618 (A2) Phytoph... 52 0.048 1
(CV929123) PM024A7 mating of 88069 (A1) and 618 (A2) Phytoph... 52 0.048 1
(CV929075) PM023D8 mating of 88069 (A1) and 618 (A2) Phytoph... 52 0.048 1
(CV929040) PM023A5 mating of 88069 (A1) and 618 (A2) Phytoph... 52 0.048 1
(CV928741) PL014D10 mycelium, H2O2-treated Phytophthora infe... 52 0.048 1
(CV928472) PL010H3 mycelium, H2O2-treated Phytophthora infes... 52 0.048 1
(CV928328) PL009B2 mycelium, H2O2-treated Phytophthora infes... 52 0.048 1
(CV928316) PL009A1 mycelium, H2O2-treated Phytophthora infes... 52 0.048 1
(CV927942) PL004C3 mycelium, H2O2-treated Phytophthora infes... 52 0.048 1
(CV927552) PK009C10 mycelium, heat treated Phytophthora infe... 52 0.048 1
(CV927508) PK008G9 mycelium, heat treated Phytophthora infes... 52 0.048 1
(CV927015) PK002D4 mycelium, heat treated Phytophthora infes... 52 0.048 1
(CV925937) PJ039D12 sporangia, purified Phytophthora infesta... 52 0.048 1
(CV925517) PJ034F2 sporangia, purified Phytophthora infestan... 52 0.048 1
(CV925457) PJ033H7 sporangia, purified Phytophthora infestan... 52 0.048 1
(CV925429) PJ033F1 sporangia, purified Phytophthora infestan... 52 0.048 1
(CV925393) PJ033B3 sporangia, purified Phytophthora infestan... 52 0.048 1
(CV925188) PJ030F6 sporangia, purified Phytophthora infestan... 52 0.048 1
(CV925119) PJ029F6 sporangia, purified Phytophthora infestan... 52 0.048 1
(CV925086) PJ029C9 sporangia, purified Phytophthora infestan... 52 0.048 1
(CV924341) PJ019E12 sporangia, purified Phytophthora infesta... 52 0.048 1
(CV924141) PJ017A1 sporangia, purified Phytophthora infestan... 52 0.048 1
(CV923857) PJ013E2 sporangia, purified Phytophthora infestan... 52 0.048 1
(CV923654) PJ011A7 sporangia, purified Phytophthora infestan... 52 0.048 1
(CV923640) PJ010F9 sporangia, purified Phytophthora infestan... 52 0.048 1
(CV923376) PJ007B8 sporangia, purified Phytophthora infestan... 52 0.048 1
(CV923327) PJ006F3 sporangia, purified Phytophthora infestan... 52 0.048 1
(CV922650) PHrpch_2437 cysts, germinating Phytophthora infes... 52 0.048 1
(CV922568) PHrpch_2040 cysts, germinating Phytophthora infes... 52 0.048 1
(CV921707) PHrpch_0793 cysts, germinating Phytophthora infes... 52 0.048 1
(CV920912) PH051D4 cysts, germinating Phytophthora infestans... 52 0.048 1
(CV918850) PH013F9 cysts, germinating Phytophthora infestans... 52 0.048 1
(CV918848) PH013F7 cysts, germinating Phytophthora infestans... 52 0.048 1
(CV918639) PH010F9 cysts, germinating Phytophthora infestans... 52 0.048 1
(CV917881) PG020E12 sporangia, germinating Phytophthora infe... 52 0.048 1
(CV917663) PG017H10 sporangia, germinating Phytophthora infe... 52 0.048 1
(CV917593) PG016H7 sporangia, germinating Phytophthora infes... 52 0.048 1
(CV917579) PG016G4 sporangia, germinating Phytophthora infes... 52 0.048 1
(CV917400) PG014G2 sporangia, germinating Phytophthora infes... 52 0.048 1
(CV917255) PG013B2 sporangia, germinating Phytophthora infes... 52 0.048 1
(CV917245) PG013A4 sporangia, germinating Phytophthora infes... 52 0.048 1
(CV917239) PG012H8 sporangia, germinating Phytophthora infes... 52 0.048 1
(CV917073) PG010H10 sporangia, germinating Phytophthora infe... 52 0.048 1
(CV916790) PG007G1 sporangia, germinating Phytophthora infes... 52 0.048 1
(CV916403) PG002B4 sporangia, germinating Phytophthora infes... 52 0.048 1
(CV916324) PG001C6 sporangia, germinating Phytophthora infes... 52 0.048 1
(CV916129) PF059A2 sporangia, cleaving Phytophthora infestan... 52 0.048 1
(CV914026) PF024B12 sporangia, cleaving Phytophthora infesta... 52 0.048 1
(CV913701) PF020D4 sporangia, cleaving Phytophthora infestan... 52 0.048 1
(CV913048) PF012D8 sporangia, cleaving Phytophthora infestan... 52 0.048 1
(CV912400) PF004D7 sporangia, cleaving Phytophthora infestan... 52 0.048 1
(CV912223) PF002C6 sporangia, cleaving Phytophthora infestan... 52 0.048 1
(CV909933) PE007H11 mycelium, carbon starvation Phytophthora... 52 0.048 1
(CV909523) PE003A1 mycelium, carbon starvation Phytophthora ... 52 0.048 1
(CV909210) PDrpcd_5147 mycelium, nitrogen starvation Phytoph... 52 0.048 1
(CV909098) PDrpcd_4880 mycelium, nitrogen starvation Phytoph... 52 0.048 1
(CV909082) PDrpcd_4859 mycelium, nitrogen starvation Phytoph... 52 0.048 1
(CV908951) PDrpcd_4647 mycelium, nitrogen starvation Phytoph... 52 0.048 1
(CV908917) PDrpcd_4593 mycelium, nitrogen starvation Phytoph... 52 0.048 1
(CV908491) PDrpcd_3892 mycelium, nitrogen starvation Phytoph... 52 0.048 1
(CV907412) PDrpcd_2362 mycelium, nitrogen starvation Phytoph... 52 0.048 1
(CV907234) PDrpcd_2170 mycelium, nitrogen starvation Phytoph... 52 0.048 1
(CV906835) PDrpcd_1720 mycelium, nitrogen starvation Phytoph... 52 0.048 1
(CV906600) PDrpcd_1442 mycelium, nitrogen starvation Phytoph... 52 0.048 1
(CV906439) PDrpcd_1246 mycelium, nitrogen starvation Phytoph... 52 0.048 1
(CV906408) PDrpcd_1212 mycelium, nitrogen starvation Phytoph... 52 0.048 1
(CV905921) PDrpcd_0344 mycelium, nitrogen starvation Phytoph... 52 0.048 1
(CV905567) PDpcd_1246 mycelium, nitrogen starvation Phytopht... 52 0.048 1
(CV904920) PDpcd_0344 mycelium, nitrogen starvation Phytopht... 52 0.048 1
(CV904610) PD049E8 mycelium, nitrogen starvation Phytophthor... 52 0.048 1
(CV904381) PD046C11 mycelium, nitrogen starvation Phytophtho... 52 0.048 1
(CV903364) PD032H4 mycelium, nitrogen starvation Phytophthor... 52 0.048 1
(CV902782) PD026C2 mycelium, nitrogen starvation Phytophthor... 52 0.048 1
(CV902639) PD024E7 mycelium, nitrogen starvation Phytophthor... 52 0.048 1
(CV902591) PD023H9 mycelium, nitrogen starvation Phytophthor... 52 0.048 1
(CV901651) PB055C1 mycelium, sporulating growth Phytophthora... 52 0.048 1
(CV900553) PB040C6 mycelium, sporulating growth Phytophthora... 52 0.048 1
(CV900535) PB039H12 mycelium, sporulating growth Phytophthor... 52 0.048 1
(CV899329) PB022G7 mycelium, sporulating growth Phytophthora... 52 0.048 1
(CV899176) PB020G3 mycelium, sporulating growth Phytophthora... 52 0.048 1
(CV899074) PB019E2 mycelium, sporulating growth Phytophthora... 52 0.048 1
(CV898718) PB014D10 mycelium, sporulating growth Phytophthor... 52 0.048 1
(CV898423) PB010G1 mycelium, sporulating growth Phytophthora... 52 0.048 1
(CV897911) PB004A11 mycelium, sporulating growth Phytophthor... 52 0.048 1
(CV897822) PB002F11 mycelium, sporulating growth Phytophthor... 52 0.048 1
(CV897701) PB001D2 mycelium, sporulating growth Phytophthora... 52 0.048 1
(CV896873) PA046E11 mycelium, non-sporulating growth Phytoph... 52 0.048 1
(CV896816) PA045H2 mycelium, non-sporulating growth Phytopht... 52 0.048 1
(CV895875) PA034F11 mycelium, non-sporulating growth Phytoph... 52 0.048 1
(CV895872) PA034F7 mycelium, non-sporulating growth Phytopht... 52 0.048 1
(CV895557) PA031B5 mycelium, non-sporulating growth Phytopht... 52 0.048 1
(CV895526) PA030G6 mycelium, non-sporulating growth Phytopht... 52 0.048 1
(CV895287) PA027G6 mycelium, non-sporulating growth Phytopht... 52 0.048 1
(CV894866) PA022G7 mycelium, non-sporulating growth Phytopht... 52 0.048 1
(CV893911) PA011C7 mycelium, non-sporulating growth Phytopht... 52 0.048 1
(CV893821) PA010B11 mycelium, non-sporulating growth Phytoph... 52 0.048 1
(CV893813) PA010B2 mycelium, non-sporulating growth Phytopht... 52 0.048 1
(CV893606) PA007E3 mycelium, non-sporulating growth Phytopht... 52 0.048 1
(CK717369) 17200 Swollen Stolon Solanum tuberosum cDNA, mRNA... 52 0.048 1
(AJ878345) Solanum tuberosum EST, clone M14. 52 0.048 1
(CF863888) psZS008xJ03f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF860518) psZG010xA05f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF860111) psZG008xK20f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF860075) psZG008xI20f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF859881) psZG007xO04f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF859777) psZG007xJ03f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF859694) psZG007xE19f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF859429) psZG006xG24f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF859210) psZG005xI14f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF859135) psZG005xC06f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF859127) psZG005xB10f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF858988) psZG004xH11f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF858816) psZG003xE01f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF858745) psZG001xO09f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF858739) psZG001xN19f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF858638) psZG001xH11f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF858607) psZG001xF17f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF858540) psZG001xB09f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF858202) psMY010iA08r Agriculture Canada Phytophthora soja... 52 0.048 1
(CF858120) psMY008iH11r Agriculture Canada Phytophthora soja... 52 0.048 1
(CF857916) psMY006iB06r Agriculture Canada Phytophthora soja... 52 0.048 1
(CF855911) psML005xM21f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF854563) psMC012xN09f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF854476) psMC011xO18f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF854446) psMC011xN03f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF853331) psMC008xG23f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF853221) psMC008xB23f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF853000) psMC007xF17f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF852984) psMC007xE23f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF852952) psMC007xC24f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF852291) psMC004xL09f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF851956) psMC003xC02f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF851747) psMC001xJ24f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF851159) psMA018xF15f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF849142) psMA009xI22f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF848971) psMA008xP04f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF848838) psMA008xH04f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF848581) psMA007xD24f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF847755) psMA002xG19f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF846608) psHB039xE03f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF842680) psHB021xC14f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF842660) psHB021xA08f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF842400) psHB019xM23f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF841573) psHB015xB02f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF841377) psHB014xD16f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF840640) psHB009xK02f USDA-IFAFS:Expression of Phytophthor... 52 0.048 1
(CF754415) EST-77-2-32-G11.r.1 Preamplified custom cDNA libr... 52 0.048 1
(AI489222) EST247561 tomato ovary, TAMU Solanum lycopersicum... 52 0.048 1
(BW686492) Solanum lycopersicum cDNA, clone: FC06BB04, 5' en... 52 0.048 1
(BQ506820) EST614235 Generation of a set of potato cDNA clon... 52 0.048 1
(BQ506819) EST614234 Generation of a set of potato cDNA clon... 52 0.048 1
(BP905199) Solanum lycopersicum cDNA, clone: LB13CD03, 5' en... 52 0.048 1
(BP904966) Solanum lycopersicum cDNA, clone: LB12DH07, 5' en... 52 0.048 1
(BP904875) Solanum lycopersicum cDNA, clone: LB12CH11, 5' en... 52 0.048 1
(BP903088) Solanum lycopersicum cDNA, clone: LB02DC11, 5' en... 52 0.048 1
(BP896961) Solanum lycopersicum cDNA, clone: LA12AF02, 5' en... 52 0.048 1
(BP893675) Solanum lycopersicum cDNA, clone: FB13CF12, 5' en... 52 0.048 1
(BP892748) Solanum lycopersicum cDNA, clone: FB11AB09, 5' en... 52 0.048 1
(BP889983) Solanum lycopersicum cDNA, clone: FB02BA04, 5' en... 52 0.048 1
(BM404728) EST579055 potato roots Solanum tuberosum cDNA clo... 52 0.048 1
(BM404578) EST578905 potato roots Solanum tuberosum cDNA clo... 52 0.048 1
(BM113404) EST560940 potato roots Solanum tuberosum cDNA clo... 52 0.048 1
(BM109645) EST557181 potato roots Solanum tuberosum cDNA clo... 52 0.048 1
(BI432500) EST535261 P. infestans-challenged potato leaf, co... 52 0.048 1
(BI210734) EST528774 cTOS Solanum lycopersicum cDNA clone cT... 52 0.048 1
(BI204237) EST522277 cTOS Solanum lycopersicum cDNA clone cT... 52 0.048 1
(BI203454) EST521494 cTOS Solanum lycopersicum cDNA clone cT... 52 0.048 1
(BG643996) EST512190 tomato shoot/meristem Solanum lycopersi... 52 0.048 1
(BG629753) cC-esflcLEL29N11a1 Tomato flower library from a m... 52 0.048 1
(BG629603) cC-esflcLEL29F03a1 Tomato flower library from a m... 52 0.048 1
(BG596474) EST495152 cSTS Solanum tuberosum cDNA clone cSTS1... 52 0.048 1
(BG595004) EST493682 cSTS Solanum tuberosum cDNA clone cSTS9... 52 0.048 1
(BG589518) EST497360 P. infestans-challenged leaf Solanum tu... 52 0.048 1
(BG133771) EST466663 tomato crown gall Solanum lycopersicum ... 52 0.048 1
(BG130068) EST475714 tomato shoot/meristem Solanum lycopersi... 52 0.048 1
(BG129174) EST474820 tomato shoot/meristem Solanum lycopersi... 52 0.048 1
(BG128686) EST474332 tomato shoot/meristem Solanum lycopersi... 52 0.048 1
(BG126442) EST472088 tomato shoot/meristem Solanum lycopersi... 52 0.048 1
(BG126383) EST472029 tomato shoot/meristem Solanum lycopersi... 52 0.048 1
(BG126336) EST471982 tomato shoot/meristem Solanum lycopersi... 52 0.048 1
(BF114194) EST441784 tomato root, plant at pre-anthesis Sola... 52 0.048 1
(BF113490) EST441080 tomato root, plant at pre-anthesis Sola... 52 0.048 1
(BE777291) MY-26-F-08 PinfestansMY Phytophthora infestans cD... 52 0.048 1
(BE776789) MY-20-D-11 PinfestansMY Phytophthora infestans cD... 52 0.048 1
(BE776340) MY-14-E-12 PinfestansMY Phytophthora infestans cD... 52 0.048 1
(BE775931) MY-08-H-01 PinfestansMY Phytophthora infestans cD... 52 0.048 1
(BE583879) 11-11C-HA PsojaeHA Glycine max/Phytophthora sojae... 52 0.048 1
(BE583771) 1-3G-HA PsojaeHA Glycine max/Phytophthora sojae m... 52 0.048 1
(BE582883) 10-8A-MY PsojaeMY Phytophthora sojae cDNA, mRNA s... 52 0.048 1
(BE582856) 8-11H-MY PsojaeMY Phytophthora sojae cDNA, mRNA s... 52 0.048 1
(BE582565) 6-6B-MY PsojaeMY Phytophthora sojae cDNA, mRNA se... 52 0.048 1
(FG057510) CBOU6497.fwd CBOU Phytophthora capsici LT1534 Myc... 52 0.048 1
(FG057509) CBOU6497.rev CBOU Phytophthora capsici LT1534 Myc... 52 0.048 1
(FG054345) CBOU484.fwd CBOU Phytophthora capsici LT1534 Myce... 52 0.048 1
(FG054344) CBOU484.rev CBOU Phytophthora capsici LT1534 Myce... 52 0.048 1
(FG048565) CBOU18219.fwd CBOU Phytophthora capsici LT1534 My... 52 0.048 1
(FG040980) CBOU13184.fwd CBOU Phytophthora capsici LT1534 My... 52 0.048 1
(FG040979) CBOU13184.rev CBOU Phytophthora capsici LT1534 My... 52 0.048 1
(FG035076) CBOT9912.fwd CBOT Phytophthora capsici LT1534 Myc... 52 0.048 1
(FG032455) CBOT8325.fwd CBOT Phytophthora capsici LT1534 Myc... 52 0.048 1
(FG032454) CBOT8325.rev CBOT Phytophthora capsici LT1534 Myc... 52 0.048 1
(FG032278) CBOT8222.fwd CBOT Phytophthora capsici LT1534 Myc... 52 0.048 1
(FG029193) CBOT6454.rev CBOT Phytophthora capsici LT1534 Myc... 52 0.048 1
(FG027370) CBOT5431.fwd CBOT Phytophthora capsici LT1534 Myc... 52 0.048 1
(FG017215) CBOT15550.fwd CBOT Phytophthora capsici LT1534 My... 52 0.048 1
(FG017214) CBOT15550.rev CBOT Phytophthora capsici LT1534 My... 52 0.048 1
(FG014943) CBOT14307.fwd CBOT Phytophthora capsici LT1534 My... 52 0.048 1
(FG014942) CBOT14307.rev CBOT Phytophthora capsici LT1534 My... 52 0.048 1
(FG014228) CBOT13895.fwd CBOT Phytophthora capsici LT1534 My... 52 0.048 1
(FG014227) CBOT13895.rev CBOT Phytophthora capsici LT1534 My... 52 0.048 1
(FG008195) CBOT10489.fwd CBOT Phytophthora capsici LT1534 My... 52 0.048 1
(FG008183) CBOT10482.fwd CBOT Phytophthora capsici LT1534 My... 52 0.048 1
(FG008182) CBOT10482.rev CBOT Phytophthora capsici LT1534 My... 52 0.048 1
(FE979281) 081751_1763_0877 Pythium ultimum ESTs Pythium ult... 52 0.048 1
(FE300366) CANP1580.fwd CANP_Daphnia_pulex_Log50_Library_2 D... 52 0.048 1
(FE300365) CANP1580.rev CANP_Daphnia_pulex_Log50_Library_2 D... 52 0.048 1
(AW626352) EST320259 tomato radicle, 5 d post-imbibition, Co... 52 0.048 1
(AW625582) EST319489 tomato radicle, 5 d post-imbibition, Co... 52 0.048 1
(AW624939) EST313768 tomato radicle, 5 d post-imbibition, Co... 52 0.048 1
(AW623728) EST321673 tomato flower buds 3-8 mm, Cornell Univ... 52 0.048 1
(AW623716) EST321661 tomato flower buds 3-8 mm, Cornell Univ... 52 0.048 1
(AW621960) EST312758 tomato root during/after fruit set, Cor... 52 0.048 1
(AW621215) EST312013 tomato root during/after fruit set, Cor... 52 0.048 1
(AW442755) EST307685 tomato mixed elicitor, BTI Solanum lyco... 52 0.048 1
(EY272425) BF01058B1B05.f1 Normalized subtracted keck librar... 52 0.048 1
(ES896017) LET098_2007-03-01/LET098_D02_005_1 Solanum lycope... 52 0.048 1
(ES894304) LET075_2007-01-31_1/LET075_G03_010_1 Solanum lyco... 52 0.048 1
(ES892315) LET046F8_2005-10-05_1/LET046F8_B03_1 Solanum lyco... 52 0.048 1
(ES890863) LET018F7_2005-09-29_1/LET018F7_F05_1 Solanum lyco... 52 0.048 1
(ES890780) LET017F7_2005-09-15_1/LET017F7_D03_1 Solanum lyco... 52 0.048 1
(AW219863) EST302346 tomato root during/after fruit set, Cor... 52 0.048 1
(AW219862) EST302345 tomato root during/after fruit set, Cor... 52 0.048 1
(AW038790) EST280746 tomato mixed elicitor, BTI Solanum lyco... 52 0.048 1
(EG549429) MM01J19_RP Sugar Beet germination cDNA library Be... 50 0.19 1
(DY865108) ApulSEQ002165 Aureobasidium pullulans pBluescript... 50 0.19 1
(DY863937) ApulSEQ18884 Aureobasidium pullulans pBluescript ... 50 0.19 1
(DY861638) ApulSEQ15365 Aureobasidium pullulans pBluescript ... 50 0.19 1
(DY859564) ApulSEQ12090 Aureobasidium pullulans pBluescript ... 50 0.19 1
(DY856485) ApulSEQ7243 Aureobasidium pullulans pBluescript (... 50 0.19 1
(DC586788) Diospyros kaki cDNA, clone: KA046_C04, 5' end, ex... 50 0.19 1
(CO741534) Hd_mx23_17C11_T7 Hypsibius dujardini mixed stage ... 50 0.19 1
(CO741296) Hd_mx23_14E04_T7 Hypsibius dujardini mixed stage ... 50 0.19 1
(CO508716) Hd_mx24_18H06_T7 Hypsibius dujardini mixed stage ... 50 0.19 1
(CO508548) Hd_mx24_16H05_T7 Hypsibius dujardini mixed stage ... 50 0.19 1
(CO508138) Hd_mx24_09F11_T7 Hypsibius dujardini mixed stage ... 50 0.19 1
(CK326368) Hd_mx23_03G10_T7 Hypsibius dujardini mixed stage ... 50 0.19 1
(CK326300) Hd_mx23_03A02_T7 Hypsibius dujardini mixed stage ... 50 0.19 1
(AJ703472) Zantedeschia aethiopica EST, clone J-18-8. 50 0.19 1
(AJ701344) Zantedeschia aethiopica EST, clone H-18-15. 50 0.19 1
(CF544417) Hd_mx17_65D03_T7 Hypsibius dujardini mixed stage ... 50 0.19 1
(CF076039) Hd_mx17_63C05_T7 Hypsibius dujardini mixed stage ... 50 0.19 1
(BU668497) MC01029H11 MC01 Sesamum indicum cDNA, mRNA sequence. 50 0.19 1
(BU668179) MC01023E02 MC01 Sesamum indicum cDNA, mRNA sequence. 50 0.19 1
(FM170449) Oryzias latipes EST, clone M092--D6_042. 50 0.19 1
(CA517466) KS09080H10 KS09 Capsicum annuum cDNA, mRNA sequence. 38 0.36 2
(CA517250) KS09076E06 KS09 Capsicum annuum cDNA, mRNA sequence. 38 0.42 2
(BM065378) KS07002H10 KS07 Capsicum annuum cDNA, mRNA sequence. 38 0.44 2
(AT001947) Antheraea yamamai posterior silkgland EST clone A... 46 0.49 2
(BW580385) Ciona savignyi cDNA, clone:csef050i05, 5'end, sin... 46 0.52 2
(CA516038) KS09050G04 KS09 Capsicum annuum cDNA, mRNA sequence. 38 0.54 2
(CA522065) KS11039G08 KS11 Capsicum annuum cDNA, mRNA sequence. 38 0.57 2
(CA832916) MCS013H07_151110 Ice plant Lambda Uni-Zap XR expr... 44 0.58 2
(BE034523) MJ02E08 MJ Mesembryanthemum crystallinum cDNA 5',... 44 0.73 2
(Z30162) S.tuberosum mRNA for 60S ribosomal protein L27. 48 0.74 1
(CE052122) tigr-gss-dog-17000358204067 Dog Library Canis lup... 48 0.74 1
(ES559355) GA0a15T3_E05.ab14610461ABI GONIO-CCMP-05 Goniomon... 48 0.74 1
(ES559293) GA0c10T3_A09.ab14910491ABI GONIO-CCMP-05 Goniomon... 48 0.74 1
(ES559153) GA0a20T3_E03.ab14610461ABI GONIO-CCMP-05 Goniomon... 48 0.74 1
(ES559115) GA0a19T3_F02.ab14610461ABI GONIO-CCMP-05 Goniomon... 48 0.74 1
(ES559095) GA0a19T32_G09.ab14610461ABI GONIO-CCMP-05 Goniomo... 48 0.74 1
(ES559092) GA0a19T32_F11.ab14610461ABI GONIO-CCMP-05 Goniomo... 48 0.74 1
(ES559036) GA0a18T3_C04.ab14610461ABI GONIO-CCMP-05 Goniomon... 48 0.74 1
(ES559005) GA0a17T3_F09.ab14610461ABI GONIO-CCMP-05 Goniomon... 48 0.74 1
(ES558975) GA0a17T3_B05.ab14610461ABI GONIO-CCMP-05 Goniomon... 48 0.74 1
(ES558948) GA0a16T32_F01.ab14610461ABI GONIO-CCMP-05 Goniomo... 48 0.74 1
(ES558736) GA0a11T32_g3.ab1 GONIO-CCMP-05 Goniomonas cf. pac... 48 0.74 1
(ES558683) GA0A10T3_C03.ab1 GONIO-CCMP-05 Goniomonas cf. pac... 48 0.74 1
(ES558627) GA0a9T3c3.ab1 GONIO-CCMP-05 Goniomonas cf. pacifi... 48 0.74 1
(ES558276) GA0a3c07T71_20040126.ab1 GONIO-CCMP-05 Goniomonas... 48 0.74 1
(ES558264) GA0a3M13R_H04.ab1 GONIO-CCMP-05 Goniomonas cf. pa... 48 0.74 1
(ES558206) GA0a2b06T31.ab1 GONIO-CCMP-05 Goniomonas cf. paci... 48 0.74 1
(EH057547) THL52h-2957 cDNA library of Tamarix hispida leave... 48 0.74 1
(EH056529) THL52h-2040 cDNA library of Tamarix hispida leave... 48 0.74 1
(EH055255) THL52h-894 cDNA library of Tamarix hispida leaves... 48 0.74 1
(EG973611) THCK-2385 Tamarix hispida roots Tamarix hispida c... 48 0.74 1
(EG972649) THCK-1519 Tamarix hispida roots Tamarix hispida c... 48 0.74 1
(EG971596) THCK-572 Tamarix hispida roots Tamarix hispida cD... 48 0.74 1
(EG966504) TH24-1189 Tamarix hispida roots Tamarix hispida c... 48 0.74 1
(EG013389) SDBT001J05x SDBT Solanum tuberosum cDNA clone SDB... 48 0.74 1
(EG010161) SSBT004M09x SSBT Solanum tuberosum cDNA clone SSB... 48 0.74 1
(EE683291) WFes0013285 Daphnia pDNR-LIB Library HCGSest1 Dap... 48 0.74 1
(EE682221) WFes0013708 Daphnia pDNR-LIB Library HCGSest1 Dap... 48 0.74 1
(EE199589) CC-F01_016_M09 Cherry of different development st... 48 0.74 1
(EE198965) CC-F01_014_I22 Cherry of different development st... 48 0.74 1
(EE197392) CC-F01_008_N04 Cherry of different development st... 48 0.74 1
(EE192671) CC-L01_013_D02 Coffea young leaves Coffea canepho... 48 0.74 1
(EB435303) TL13.110E04F.060320T7 TL13 Nicotiana tabacum cDNA... 48 0.74 1
(DV969164) GC07171 Gracilaria changii cDNA library Gracilari... 48 0.74 1
(DV707074) CGN-54682 Cherry of Early Development Stage Coffe... 48 0.74 1
(DV706543) CGN-53993 Cherry of Early Development Stage Coffe... 48 0.74 1
(DV704609) CGN-51448 Cherry of Early Development Stage Coffe... 48 0.74 1
(DV701207) CGN-47357 Seed of Late Development Stage Coffea c... 48 0.74 1
(DV699228) CGN-45019 Seed of Late Development Stage Coffea c... 48 0.74 1
(DV696662) CGN-41902 Leaf Coffea canephora cDNA clone cccl27... 48 0.74 1
(DV694178) CGN-38576 Leaf Coffea canephora cDNA clone cccl31... 48 0.74 1
(DV688627) CGN-31376 Leaf Coffea canephora cDNA clone cccl23... 48 0.74 1
(DV680215) CGN-18751 Seed of Middle Development Stage Coffea... 48 0.74 1
(DV676704) CGN-13819 Pericarp Coffea canephora cDNA clone cc... 48 0.74 1
(DV668114) CGN-6628 Pericarp Coffea canephora cDNA clone ccc... 48 0.74 1
(DV626122) 96547.1 Cold Sweetening C Solanum tuberosum cDNA ... 48 0.74 1
(DV624960) 95249.1 Cold Sweetening C Solanum tuberosum cDNA ... 48 0.74 1
(DV624105) 93602.1 Cold Sweetening C Solanum tuberosum cDNA ... 48 0.74 1
(DV622715) 92096.1 Cold Sweetening C Solanum tuberosum cDNA ... 48 0.74 1
(DT603823) aam01-37ms1-g05 Aam01 Acorus americanus cDNA clon... 48 0.74 1
(DT576970) aam01-45ms1-i10 Aam01 Acorus americanus cDNA clon... 48 0.74 1
(DN941913) 3771.2 Tuber Skin Solanum tuberosum cDNA clone 37... 48 0.74 1
(DN941377) 55821.2 After-Cooking Darkening C Solanum tuberos... 48 0.74 1
(DN849442) 13150.2 Stolon Solanum tuberosum cDNA clone 13150... 48 0.74 1
(DN743618) 94303.1 Full Length Mixed Tuber Solanum tuberosum... 48 0.74 1
(DN590630) 91602.1 Late Blight-Challenged Tubers Solanum tub... 48 0.74 1
(DN590191) 91028.1 Late Blight-Challenged Tubers Solanum tub... 48 0.74 1
(AM717623) Cucumis melo subsp. melo EST, clone PS_06-A12-M13R. 48 0.74 1
(CX700303) 87162.1 Stolon Solanum tuberosum cDNA clone 87162... 48 0.74 1
(CX699856) 86629.1 Stolon Solanum tuberosum cDNA clone 86629... 48 0.74 1
(CV899665) PB027F8 mycelium, sporulating growth Phytophthora... 48 0.74 1
(CV651557) 75476.1 Low Molecular Weight Solanum tuberosum cD... 48 0.74 1
(CV501507) 66020.1 Mixed Leaf Solanum tuberosum cDNA clone 6... 48 0.74 1
(CV501380) 65885.1 Mixed Leaf Solanum tuberosum cDNA clone 6... 48 0.74 1
(CV497136) 61304.1 Mixed Leaf Solanum tuberosum cDNA clone 6... 48 0.74 1
(CV495976) 73640.1 Cold Sweetening B Solanum tuberosum cDNA ... 48 0.74 1
(CV493861) 38415.1 Cold Sweetening B Solanum tuberosum cDNA ... 48 0.74 1
(CV493316) 37688.1 Cold Sweetening B Solanum tuberosum cDNA ... 48 0.74 1
(CV492157) 36133.1 Cold Sweetening B Solanum tuberosum cDNA ... 48 0.74 1
(CV477758) 57686.1 Developing Tubers Solanum tuberosum cDNA ... 48 0.74 1
(CV473870) 22161.1 Developing Tubers Solanum tuberosum cDNA ... 48 0.74 1
(CV469668) 42368.1 Common Scab-Challenged Tubers Solanum tub... 48 0.74 1
(CV431273) 55424.1 After-Cooking Darkening C Solanum tuberos... 48 0.74 1
(CV431074) 55032.1 After-Cooking Darkening C Solanum tuberos... 48 0.74 1
(CV430943) 54794.1 After-Cooking Darkening C Solanum tuberos... 48 0.74 1
(CV429901) 52828.1 After-Cooking Darkening C Solanum tuberos... 48 0.74 1
(CV286747) 67797.1 After-Cooking Darkening A Solanum tuberos... 48 0.74 1
(CN516909) 548.1 Tuber Skin Solanum tuberosum cDNA clone 548... 48 0.74 1
(CN516823) 5191.1 Tuber Skin Solanum tuberosum cDNA clone 51... 48 0.74 1
(CN516817) 5185.1 Tuber Skin Solanum tuberosum cDNA clone 51... 48 0.74 1
(CN515685) 3787.1 Tuber Skin Solanum tuberosum cDNA clone 37... 48 0.74 1
(CN515671) 3771.1 Tuber Skin Solanum tuberosum cDNA clone 37... 48 0.74 1
(CN515005) 2951.1 Tuber Skin Solanum tuberosum cDNA clone 29... 48 0.74 1
(CN514815) 2720.1 Tuber Skin Solanum tuberosum cDNA clone 27... 48 0.74 1

>(AC116982) Dictyostelium discoideum chromosome 2 map 3622643-3879522
strain AX4, complete sequence.
Length = 256879

Score = 708 bits (357), Expect(2) = 0.0
Identities = 357/357 (100%)
Strand = Plus / Plus


Query: 129 gataaacattcagttaaagctagtattagtgttggtgtaccaaaaaataatgaaaaggtt 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132257 gataaacattcagttaaagctagtattagtgttggtgtaccaaaaaataatgaaaaggtt 132316


Query: 189 ttaacaagaattgaaaatgttaaaggtataatcggttgtattcaattggtatcaggtcat 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132317 ttaacaagaattgaaaatgttaaaggtataatcggttgtattcaattggtatcaggtcat 132376


Query: 249 tatttaatgatattcaaagaacataatcatgttgcaactgtgacaggtaagaaaatctat 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132377 tatttaatgatattcaaagaacataatcatgttgcaactgtgacaggtaagaaaatctat 132436


Query: 309 caaatgaaagatgtcgaattgattccattctttccaaatcagcaatcactagtatcaatc 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132437 caaatgaaagatgtcgaattgattccattctttccaaatcagcaatcactagtatcaatc 132496


Query: 369 cccgatcaagatgccgaggaacaacatttatcgatgattagatggttattgtcgtcagag 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132497 cccgatcaagatgccgaggaacaacatttatcgatgattagatggttattgtcgtcagag 132556


Query: 429 aatttctatttctcatatgactatgatttcactcttacacttcaaagacagtattca 485
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132557 aatttctatttctcatatgactatgatttcactcttacacttcaaagacagtattca 132613

Score = 196 bits (99), Expect(2) = 0.0
Identities = 99/99 (100%)
Strand = Plus / Plus


Query: 503 aagcggatcgtcattaggcgagcgttgtgattcacgtttcttttggaacgaaaagtatgt 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132631 aagcggatcgtcattaggcgagcgttgtgattcacgtttcttttggaacgaaaagtatgt 132690


Query: 563 tacaattttaagtaaagagcatggtttgggtgactggat 601
|||||||||||||||||||||||||||||||||||||||
Sbjct: 132691 tacaattttaagtaaagagcatggtttgggtgactggat 132729

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 906,978,756
Number of extensions: 49209873
Number of successful extensions: 3628485
Number of sequences better than 10.0: 751
Length of query: 1161
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1137
Effective length of database: 96,409,374,237
Effective search space: 109617458507469
Effective search space used: 109617458507469
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.27
Homology vs Protein
Query= Contig-U16177-1 (Contig-U16177-1Q) /CSM_Contig/Contig-U16177-1Q.Seq.d
(1161 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q55AW9) RecName: Full=Phosphatidylinositide phosphatase SAC1; ... 350 7e-95
(Q55BE6) RecName: Full=60S ribosomal protein L27; 286 1e-75
AY682471_1(AY682471|pid:none) Chara globularis 60S ribosomal pro... 148 3e-34
EF083448_1(EF083448|pid:none) Picea sitchensis clone WS02716_F22... 144 5e-33
EU979496_1(EU979496|pid:none) Ornithoctonus huwena clone HWEc247... 142 2e-32
(P0C2H7) RecName: Full=60S ribosomal protein L27-B; &S69638(S69... 142 3e-32
(P0C2H6) RecName: Full=60S ribosomal protein L27-A; &S46790(S46... 141 4e-32
AM479241_1(AM479241|pid:none) Vitis vinifera contig VV78X167717.... 140 9e-32
(P41101) RecName: Full=60S ribosomal protein L27; &Z30162_1(Z30... 139 1e-31
AY857441_1(AY857441|pid:none) Suberites domuncula L27 mRNA, comp... 139 2e-31
AB374965_1(AB374965|pid:none) Solea senegalensis RPL27 mRNA for ... 138 3e-31
AF400191_1(AF400191|pid:none) Spodoptera frugiperda ribosomal pr... 138 3e-31
EU139224_1(EU139224|pid:none) Flustra foliacea putative 60S ribo... 138 3e-31
(P61359) RecName: Full=60S ribosomal protein L27; &AY437394_1(A... 138 4e-31
AB180435_1(AB180435|pid:none) Plutella xylostella mRNA for Ribos... 138 4e-31
EU855137_1(EU855137|pid:none) Ochlerotatus taeniorhynchus clone ... 137 6e-31
AY892447_1(AY892447|pid:none) Synthetic construct Homo sapiens c... 137 6e-31
T06426(T06426) ribosomal protein L27 - garden pea &U10044_1(U10... 137 6e-31
T06431(T06431) ribosomal protein L27-5 - garden pea &U10046_1(U... 137 6e-31
AB043975_1(AB043975|pid:none) Panax ginseng mRNA for ribosomal p... 137 7e-31
CR382128_225(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 137 1e-30
AY292611_1(AY292611|pid:none) Oikopleura dioica 60S ribosomal pr... 137 1e-30
AY769296_1(AY769296|pid:none) Bombyx mori ribosomal protein L27 ... 137 1e-30
AC134322_30(AC134322|pid:none) Medicago truncatula clone mth2-17... 137 1e-30
EF207978_1(EF207978|pid:none) Heliconius melpomene ribosomal pro... 137 1e-30
BT082630_1(BT082630|pid:none) Anoplopoma fimbria clone afim-evh-... 137 1e-30
DQ214759_1(DQ214759|pid:none) Taeniopygia guttata clone 0061P002... 137 1e-30
AY197729_1(AY197729|pid:none) Leishmania major ribosomal protein... 137 1e-30
DQ848865_1(DQ848865|pid:none) Scophthalmus maximus clone kbc35 6... 136 1e-30
AM850117_14(AM850117|pid:none) Nakaseomyces delphensis STP1 regi... 136 1e-30
EF145683_1(EF145683|pid:none) Populus trichocarpa clone WS0112_J... 136 1e-30
BC056506_1(BC056506|pid:none) Xenopus laevis ribosomal protein L... 136 1e-30
AF176558_1(AF176558|pid:none) Trypanosoma cruzi ribosomal protei... 136 1e-30
EU284914_1(EU284914|pid:none) TSA: Elaeis guineensis EgEfMPOB000... 136 1e-30
DQ886845_1(DQ886845|pid:none) Argas monolakensis 60S ribosomal p... 136 1e-30
AM049090_1(AM049090|pid:none) Dascillus cervinus mRNA for riboso... 136 1e-30
BT053531_1(BT053531|pid:none) Medicago truncatula clone MTYFP_FQ... 136 2e-30
DQ214765_1(DQ214765|pid:none) Taeniopygia guttata clone 0061P001... 136 2e-30
AK311792_1(AK311792|pid:none) Homo sapiens cDNA, FLJ92053, highl... 136 2e-30
(Q05462) RecName: Full=60S ribosomal protein L27; &T06451(T0645... 136 2e-30
EU042099_1(EU042099|pid:none) Epinephelus coioides 60S ribosomal... 135 2e-30
AM049095_1(AM049095|pid:none) Timarcha balearica mRNA for riboso... 134 5e-30
DQ214764_1(DQ214764|pid:none) Taeniopygia guttata clone 0058P005... 134 5e-30
T06430(T06430) ribosomal protein L27-4 - garden pea &U10045_1(U... 134 6e-30
CU928171_217(CU928171|pid:none) Kluyveromyces thermotolerans str... 134 6e-30
BT084526_1(BT084526|pid:none) Zea mays full-length cDNA clone ZM... 134 8e-30
BT040341_1(BT040341|pid:none) Zea mays full-length cDNA clone ZM... 134 8e-30
AM049091_1(AM049091|pid:none) Eucinetus sp. APV-2005 mRNA for ri... 133 1e-29
CR380957_279(CR380957|pid:none) Candida glabrata strain CBS138 c... 133 1e-29
FM992688_1144(FM992688|pid:none) Candida dubliniensis CD36 chrom... 132 2e-29
CP001329_16(CP001329|pid:none) Micromonas sp. RCC299 chromosome ... 132 2e-29
AM502250_320(AM502250|pid:none) Leishmania infantum chromosome 3... 132 2e-29
AM049088_1(AM049088|pid:none) Cicindela campestris mRNA for ribo... 132 2e-29
BT048470_1(BT048470|pid:none) Salmo salar clone ssal-eve-518-081... 132 2e-29
DQ413202_1(DQ413202|pid:none) Acyrthosiphon pisum isolate WHAP00... 132 2e-29
EF144398_1(EF144398|pid:none) Populus trichocarpa clone PX0019_E... 132 3e-29
CU638743_697(CU638743|pid:none) Podospora anserina genomic DNA c... 131 4e-29
EF145315_1(EF145315|pid:none) Populus trichocarpa clone WS01123_... 131 4e-29
BX284754_19(BX284754|pid:none) Neurospora crassa DNA linkage gro... 131 5e-29
EU558324_1(EU558324|pid:none) Novocrania anomala putative 60S ri... 131 5e-29
AM049089_1(AM049089|pid:none) Curculio glandium mRNA for ribosom... 130 7e-29
CT005269_281(CT005269|pid:none) Leishmania major strain Friedlin... 130 7e-29
(O14388) RecName: Full=60S ribosomal protein L27-A; &AL049474_7... 130 7e-29
AM049093_1(AM049093|pid:none) Hister sp. APV-2005 mRNA for ribos... 130 9e-29
(P51419) RecName: Full=60S ribosomal protein L27-3; &AK228394_1... 130 9e-29
EF145487_1(EF145487|pid:none) Populus trichocarpa clone WS01125_... 130 9e-29
CR382139_421(CR382139|pid:none) Debaryomyces hansenii strain CBS... 130 9e-29
AJ009699_1(AJ009699|pid:none) Stichodactyla helianthus mRNA for ... 129 2e-28
BT076936_1(BT076936|pid:none) Caligus rogercresseyi clone crog-e... 128 3e-28
(Q8LCL3) RecName: Full=60S ribosomal protein L27-2; &AP001306_1... 128 4e-28
AC084763_16(AC084763|pid:none) Oryza sativa chromosome 10 BAC OS... 127 6e-28
(O74538) RecName: Full=60S ribosomal protein L27-B; &AL031543_7... 127 6e-28
AP007154_367(AP007154|pid:none) Aspergillus oryzae RIB40 genomic... 126 1e-27
AY086536_1(AY086536|pid:none) Arabidopsis thaliana clone 25631 m... 126 2e-27
EF634631_1(EF634631|pid:none) Pristionchus sp. 3 CZ3975 large su... 126 2e-27
BT080462_1(BT080462|pid:none) Caligus clemensi clone ccle-evs-51... 125 2e-27
EF634633_1(EF634633|pid:none) Pristionchus aerivorus large subun... 125 3e-27
BC021886_1(BC021886|pid:none) Homo sapiens ribosomal protein L27... 125 4e-27
EF634634_1(EF634634|pid:none) Pristionchus sp. 6 RS5101 large su... 125 4e-27
EF634632_1(EF634632|pid:none) Pristionchus sp. 4 RS5050 large su... 124 5e-27
EF634637_1(EF634637|pid:none) Pristionchus pseudaerivorus large ... 124 6e-27
EF634639_1(EF634639|pid:none) Pristionchus sp. 11 RS5228 large s... 124 6e-27
EF634629_1(EF634629|pid:none) Pristionchus entomophagus large su... 124 6e-27
(P91914) RecName: Full=60S ribosomal protein L27; &AF003143_5(A... 122 2e-26
EF634636_1(EF634636|pid:none) Pristionchus pauli large subunit r... 121 4e-26
EF634627_1(EF634627|pid:none) Pristionchus maupasi large subunit... 120 7e-26
FN357483_15(FN357483|pid:none) Schistosoma mansoni genome sequen... 120 7e-26
FN315811_1(FN315811|pid:none) Schistosoma japonicum isolate Anhu... 117 8e-25
FJ655906_1(FJ655906|pid:none) Homo sapiens RPL27/NME2 fusion pro... 115 2e-24
FN321675_1(FN321675|pid:none) Schistosoma japonicum isolate Anhu... 115 2e-24
EF634642_1(EF634642|pid:none) Pristionchus sp. 14 RS5230 large s... 115 3e-24
AY735177_1(AY735177|pid:none) Fundulus heteroclitus ribosomal pr... 115 4e-24
AM849528_1(AM849528|pid:none) Pomphorhynchus laevis partial mRNA... 112 3e-23
EU975730_1(EU975730|pid:none) Zea mays clone 498489 unknown mRNA. 110 7e-23
BT048667_1(BT048667|pid:none) Salmo salar clone ssal-rgb2-614-24... 110 1e-22
EU962066_1(EU962066|pid:none) Zea mays clone 240002 60S ribosoma... 109 2e-22
EU885230_1(EU885230|pid:none) Strongyloides vituli ribosomal pro... 109 2e-22
AE014187_577(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 103 2e-20
AM910994_452(AM910994|pid:none) Plasmodium knowlesi strain H chr... 102 2e-20
BT049462_1(BT049462|pid:none) Salmo salar clone ssal-eve-579-357... 90 2e-16
EF525546_1(EF525546|pid:none) Buddenbrockia plumatellae ribosoma... 86 3e-15
EU960653_1(EU960653|pid:none) Zea mays clone 227073 unknown mRNA. 75 3e-12
AF083031_21(AF083031|pid:none) Guillardia theta nucleomorph chro... 75 3e-12
FN357465_12(FN357465|pid:none) Schistosoma mansoni genome sequen... 75 6e-12
FN357465_11(FN357465|pid:none) Schistosoma mansoni genome sequen... 75 6e-12
(Q9W0I6) RecName: Full=Phosphatidylinositide phosphatase SAC1; ... 70 1e-10
AY812696_1(AY812696|pid:none) Schistosoma japonicum SJCHGC02825 ... 68 7e-10
(Q6GM29) RecName: Full=Phosphatidylinositide phosphatase SAC1; ... 67 9e-10
(Q9ES21) RecName: Full=Phosphatidylinositide phosphatase SAC1; ... 66 2e-09
AM049094_1(AM049094|pid:none) Micromalthus debilis partial mRNA ... 66 3e-09
(A6QL88) RecName: Full=Phosphatidylinositide phosphatase SAC1; ... 66 3e-09
AE017353_83(AE017353|pid:none) Cryptococcus neoformans var. neof... 66 3e-09
(A4VCH0) RecName: Full=Phosphatidylinositide phosphatase SAC1-B;... 65 4e-09
AK122390_1(AK122390|pid:none) Mus musculus mRNA for mKIAA0851 pr... 65 4e-09
AL590996_10(AL590996|pid:none) Mouse DNA sequence from clone RP2... 65 5e-09
(Q5R921) RecName: Full=Phosphatidylinositide phosphatase SAC1; ... 64 8e-09
AK291142_1(AK291142|pid:none) Homo sapiens cDNA FLJ76818 complet... 64 1e-08
AL136831_1(AL136831|pid:none) Homo sapiens mRNA; cDNA DKFZp434O1... 64 1e-08
AJ297357_2(AJ297357|pid:none) Homo sapiens partial LIMD1 gene fo... 64 1e-08
Z83220_3(Z83220|pid:none) Caenorhabditis elegans Cosmid C34B7, c... 63 2e-08
T19694(T19694)hypothetical protein C34B7.2 - Caenorhabditis eleg... 63 2e-08
CR382137_843(CR382137|pid:none) Debaryomyces hansenii strain CBS... 62 3e-08
AM920436_1908(AM920436|pid:none) Penicillium chrysogenum Wiscons... 62 4e-08
BX842682_18(BX842682|pid:none) Neurospora crassa DNA linkage gro... 62 4e-08
AF266459_1(AF266459|pid:none) Arabidopsis thaliana SAC1-like pro... 60 1e-07
AK169881_1(AK169881|pid:none) Mus musculus NOD-derived CD11c +ve... 60 1e-07
(Q91WF7) RecName: Full=SAC domain-containing protein 3; AltName:... 60 1e-07
AK155392_1(AK155392|pid:none) Mus musculus NOD-derived CD11c +ve... 60 1e-07
BC114694_1(BC114694|pid:none) Bos taurus FIG4 homolog (S. cerevi... 60 2e-07
AL133472_5(AL133472|pid:none) Human DNA sequence from clone RP1-... 59 3e-07
(Q92562) RecName: Full=SAC domain-containing protein 3; AltName:... 59 3e-07
DQ666853_1(DQ666853|pid:none) Rattus norvegicus SAC3 (Sac3) mRNA... 59 3e-07
FN392319_1414(FN392319|pid:none) Pichia pastoris GS115 chromosom... 59 4e-07
AK291671_1(AK291671|pid:none) Homo sapiens cDNA FLJ76880 complet... 59 4e-07
CP000500_384(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 58 6e-07
AP007162_146(AP007162|pid:none) Aspergillus oryzae RIB40 genomic... 57 1e-06
AF266458_1(AF266458|pid:none) Arabidopsis thaliana SAC1-like pro... 57 2e-06
AB011474_9(AB011474|pid:none) Arabidopsis thaliana genomic DNA, ... 57 2e-06
CR382125_86(CR382125|pid:none) Kluyveromyces lactis strain NRRL ... 56 2e-06
EF576121_1(EF576121|pid:none) Oryza sativa (indica cultivar-grou... 56 2e-06
AP007157_677(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 56 3e-06
CR382131_1372(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 55 4e-06
CU633438_180(CU633438|pid:none) Podospora anserina genomic DNA c... 55 5e-06
AY915402_1(AY915402|pid:none) Schistosoma japonicum SJCHGC05955 ... 55 6e-06
AM270049_10(AM270049|pid:none) Aspergillus niger contig An03c008... 54 8e-06
AE016817_206(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 54 8e-06
(P42837) RecName: Full=Polyphosphoinositide phosphatase; ... 54 1e-05
AE013599_3528(AE013599|pid:none) Drosophila melanogaster chromos... 53 2e-05
AK100127_1(AK100127|pid:none) Oryza sativa Japonica Group cDNA c... 53 2e-05
AF049236_8(AF049236|pid:none) Arabidopsis thaliana putative tran... 53 2e-05
AK318779_1(AK318779|pid:none) Arabidopsis thaliana AT3G51830 mRN... 53 2e-05
BT086272_1(BT086272|pid:none) Zea mays full-length cDNA clone ZM... 52 3e-05
CU928166_30(CU928166|pid:none) Kluyveromyces thermotolerans stra... 52 4e-05
AM464610_1(AM464610|pid:none) Vitis vinifera contig VV78X177514.... 51 7e-05
AP004876_12(AP004876|pid:none) Oryza sativa Japonica Group genom... 50 1e-04
AE014134_790(AE014134|pid:none) Drosophila melanogaster chromoso... 50 1e-04
CU638744_341(CU638744|pid:none) Podospora anserina genomic DNA c... 49 3e-04
AE017345_183(AE017345|pid:none) Cryptococcus neoformans var. neo... 49 3e-04
AC116957_140(AC116957|pid:none) Dictyostelium discoideum chromos... 49 4e-04
FM992688_922(FM992688|pid:none) Candida dubliniensis CD36 chromo... 47 0.001
FB336916_1(FB336916|pid:none) Sequence 4442 from Patent WO200711... 45 0.004
AY736013_1(AY736013|pid:none) Danio rerio synaptojanin 1 mRNA, c... 45 0.004
AK129249_1(AK129249|pid:none) Mus musculus mRNA for mKIAA0966 pr... 44 0.008
(Q8CDA1) RecName: Full=Phosphatidylinositide phosphatase SAC2; ... 44 0.008
AK039468_1(AK039468|pid:none) Mus musculus adult male spinal cor... 44 0.008
AL590444_32(AL590444|pid:none) chromosome IV of strain GB-M1 of ... 44 0.011
EU976916_1(EU976916|pid:none) Zea mays clone 993583 unknown mRNA. 44 0.011
AK316827_1(AK316827|pid:none) Arabidopsis thaliana AT3G14205 mRN... 44 0.011
AP000600_19(AP000600|pid:none) Arabidopsis thaliana genomic DNA,... 44 0.011
CR380957_6(CR380957|pid:none) Candida glabrata strain CBS138 chr... 44 0.011
AB023183_1(AB023183|pid:none) Homo sapiens mRNA for KIAA0966 pro... 44 0.014
AC006551_3(AC006551|pid:none) Arabidopsis thaliana chromosome I ... 43 0.019
AF266460_1(AF266460|pid:none) Arabidopsis thaliana FIG4-like pro... 43 0.019
AC003979_20(AC003979|pid:none) Arabidopsis thaliana chromosome 1... 43 0.019
FB336958_1(FB336958|pid:none) Sequence 4484 from Patent WO200711... 43 0.019
FB336940_1(FB336940|pid:none) Sequence 4466 from Patent WO200711... 43 0.019
FB336962_1(FB336962|pid:none) Sequence 4488 from Patent WO200711... 43 0.019
FB336960_1(FB336960|pid:none) Sequence 4486 from Patent WO200711... 43 0.019
BC136603_1(BC136603|pid:none) Homo sapiens synaptojanin 1, mRNA ... 43 0.025
BC098395_1(BC098395|pid:none) Homo sapiens synaptojanin 1, mRNA ... 43 0.025
AB385401_1(AB385401|pid:none) Synthetic construct DNA, clone: pF... 43 0.025
AF009040_1(AF009040|pid:none) Homo sapiens synaptojanin mRNA, al... 43 0.025
BC019630_1(BC019630|pid:none) Homo sapiens synaptojanin 1, mRNA ... 43 0.025
AK121887_1(AK121887|pid:none) Oryza sativa Japonica Group cDNA c... 42 0.032
CU928179_91(CU928179|pid:none) Zygosaccharomyces rouxii strain C... 42 0.032
EU973116_1(EU973116|pid:none) Zea mays clone 393573 hypothetical... 42 0.032
BT054031_1(BT054031|pid:none) Zea mays full-length cDNA clone ZM... 42 0.055
FB336946_1(FB336946|pid:none) Sequence 4472 from Patent WO200711... 41 0.093
S68448(S68448;S78547;S78527)synaptojanin, 170K - rat 41 0.093
AB093272_1(AB093272|pid:none) Mus musculus premature mRNA for mK... 41 0.093
(Q8CHC4) RecName: Full=Synaptojanin-1; EC=3.1.3.36; Alt... 41 0.093
FB336934_1(FB336934|pid:none) Sequence 4460 from Patent WO200711... 41 0.093
AC079633_19(AC079633|pid:none) Genomic Sequence for Oryza sativa... 40 0.12
EU966015_1(EU966015|pid:none) Zea mays clone 290806 60 ribosomal... 40 0.16
CR940347_321(CR940347|pid:none) Theileria annulata strain Ankara... 40 0.21
(A8E7C5) RecName: Full=Phosphatidylinositide phosphatase SAC2; ... 39 0.36
FN392320_1088(FN392320|pid:none) Pichia pastoris GS115 chromosom... 37 1.0
AE016818_786(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 37 1.0
AM980953_1(AM980953|pid:none) Brachionus plicatilis partial mRNA... 37 1.3
CP000387_1441(CP000387|pid:none) Streptococcus sanguinis SK36, c... 37 1.8
U39947_1(U39947|pid:none) Saccharomyces cerevisiae DOA1 gene, co... 36 2.3
FB336912_1(FB336912|pid:none) Sequence 4438 from Patent WO200711... 36 3.0
EU975449_1(EU975449|pid:none) Zea mays clone 490596 hypothetical... 36 3.0
AC151460_1(AC151460|pid:none) Medicago truncatula clone mth2-6f1... 35 3.9
BA000016_1195(BA000016|pid:none) Clostridium perfringens str. 13... 35 3.9
AB106865_1(AB106865|pid:none) Clostridium stercorarium pel9A gen... 35 3.9
DQ158857_71(DQ158857|pid:none) Bigelowiella natans nucleomorph c... 35 5.1
CP000312_1186(CP000312|pid:none) Clostridium perfringens SM101, ... 35 5.1
U10043_1(U10043|pid:none) Pisum sativum ribosomal protein L27 ho... 35 5.1
CP001333_134(CP001333|pid:none) Micromonas sp. RCC299 chromosome... 35 5.1
AL158014_2(AL158014|pid:none) Human DNA sequence from clone RP11... 35 6.7
CP000679_767(CP000679|pid:none) Caldicellulosiruptor saccharolyt... 35 6.7
(O15056) RecName: Full=Synaptojanin-2; EC=3.1.3.36; Alt... 34 8.7
AL844508_203(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.7
AK294480_1(AK294480|pid:none) Homo sapiens cDNA FLJ60489 complet... 34 8.7
(Q6LV34) RecName: Full=RNA polymerase-associated protein rapA; ... 34 8.7
AY152396_1(AY152396|pid:none) Homo sapiens synaptojanin 2A mRNA,... 34 8.7
AF131910_1(AF131910|pid:none) Leishmania braziliensis L6 ribosom... 34 8.7

>(Q55AW9) RecName: Full=Phosphatidylinositide phosphatase SAC1;
EC=3.1.3.-;
Length = 581

Score = 350 bits (897), Expect = 7e-95
Identities = 172/183 (93%), Positives = 172/183 (93%)
Frame = +3

Query: 51 MNIELINTNERFILINNGNKDKSLNIDKHSVKASISVGVPKNNEKVLTRIENVKGIIGCI 230
MNIELINTNERFILINNGNKDKSLNIDKHSVKASISVGVPKNNEKVLTRIENVKGIIGCI
Sbjct: 1 MNIELINTNERFILINNGNKDKSLNIDKHSVKASISVGVPKNNEKVLTRIENVKGIIGCI 60

Query: 231 QLVSGHYLMIFKEHNHVATVTGKKIYQMKDVELIPFFPNQQSLVSIPDQDAEEQHLSMIR 410
QLVSGHYLMIFKEHNHVATVTGKKIYQMKDVELIPFFPNQQSLVSIPDQDAEEQHLSMIR
Sbjct: 61 QLVSGHYLMIFKEHNHVATVTGKKIYQMKDVELIPFFPNQQSLVSIPDQDAEEQHLSMIR 120

Query: 411 WLLSSENFYFSYDYDFTLTLQRQYXXXXXXXXXXXLGERCDSRFFWNEKYVTILSKEHGL 590
WLLSSENFYFSYDYDFTLTLQRQY LGERCDSRFFWNEKYVTILSKEHGL
Sbjct: 121 WLLSSENFYFSYDYDFTLTLQRQYSTTTTTTSGSSLGERCDSRFFWNEKYVTILSKEHGL 180

Query: 591 GDW 599
GDW
Sbjct: 181 GDW 183

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,753,587,494
Number of extensions: 34881132
Number of successful extensions: 88039
Number of sequences better than 10.0: 218
Number of HSP's gapped: 87483
Number of HSP's successfully gapped: 218
Length of query: 387
Length of database: 1,061,185,681
Length adjustment: 130
Effective length of query: 257
Effective length of database: 636,287,441
Effective search space: 163525872337
Effective search space used: 163525872337
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.55 gvh: 0.33 alm: 0.35 top: 0.53 tms: 0.00 mit: 0.20 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

64.0 %: cytoplasmic
24.0 %: nuclear
4.0 %: cytoskeletal
4.0 %: mitochondrial
4.0 %: peroxisomal

>> prediction for Contig-U16177-1 is cyt

VS (DIR, S) 2
VH (FL, L) 2
VF (FL, S) 2
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 2
FC-IC (SUB) 0