Contig-U16167-1
Contig ID Contig-U16167-1
Contig update 2004. 6.11
Contig sequence
>Contig-U16167-1 (Contig-U16167-1Q) /CSM_Contig/Contig-U16167-1Q.Seq.d
ATTACCTTTTAATATAAATATTTTATATATACATATATTTTACATAAAAT
ATCATTTTCTTTTTTTTTTTTGTTTTTATTTTTTTTATTATTATAAAAAG
TTATAGATCAAAATAAATAAAAAATTTAANCAGAATGTCAACTTCAGTTT
CTCCAAATTATTTGGACTTGGTTCCAATTGATTTTATGATGAAATTATTA
CCATCAGAATATACTTTTCAAAGTTTATTTGAAGTCGATTACAGTAAATG
GGATTGGAGTCAATTAATCCCATCAAAAGATTTCAAATTTATCGAGGGTG
TTNCACCATTCACAAATAAAAATTTCATCTTTATGTCTATTTTCCTTTAT
CTTTTAACTGTTTTATCAATTAAAGTTTTATTTAATGTTTTAAATATAAA
AGGATGGAGACTTGGTATGATATCAGGTATTCATAATTNAATTTTATGNG
TTNGGCCATTTGTTATGNGCGCAGGTTTATCATATGATCTTTTACTTTTA
TTC----------GAAGAGAATTAATTTTCTTACAATTGCATGGACATGG
TTACCAGGAGTTGCATATGCAAGTGTTGGTATGTTTGCCAATACATTAGT
TCATGTATTTATGTATTACTATTATTTTAGAACATCAATTAATCCATCAG
TTAGAATTTGGTGGAAATCATATCTTACAAGTGGTCAATTATTCCAATTT
TCAATGTCATTCGTATTAGCAATTCCATTCCTCTTACAAGATATTTCTTT
AAATCAAACCCCTGGTAAATTTAATCATTCATGTAAAGGTTGGGGTGCAT
TTGGTTTCACAATGGTAAACAATTTAATATTTTTAATTTTATTCATTAAT
TTCTATATTCAAACATATGTTAATAGAAAATCTTCAACAAAATCAAAATT
AAAATCTGAATAAAAAAAAAATAAAAAAAGAGAATAGGCAAAAAAAATTT
TTTTATTTATATATTTAACACCTCAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAA

Gap gap included
Contig length 1009
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 8141352
End point 8142259
Strand (PLUS/MINUS) PLUS
Number of clones 3
Number of EST 4
Link to clone list U16167
List of clone(s)

est1=VFH486F,1,503
est2=FC-AJ10E,504,1009
est3=FC-BB10Z,556,1009
est4=VFH486Z,565,937
Translated Amino Acid sequence
ylli*ifyiyiyft*niifffffvfiffiiiksyrsk*IKNLXRMSTSVSPNYLDLVPID
FMMKLLPSEYTFQSLFEVDYSKWDWSQLIPSKDFKFIEGVXPFTNKNFIFMSIFLYLLTV
LSIKVLFNVLNIKGWRLGMISGIHNXILXVXPFVMXAGLSYDLLLLF---

---KRINFLTIAWTWLPGVAYASVGMFANTLVHVFMYYYYFRTSINPSVRIWWKSYLTSG
QLFQFSMSFVLAIPFLLQDISLNQTPGKFNHSCKGWGAFGFTMVNNLIFLILFINFYIQT
YVNRKSSTKSKLKSE*kknkkre*akkiflfiyltpqkkkkkkkkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
itf*ykyfiytyilhkisfsffflflfflll*kvidqnk*ki*xecqlqflqiiwtwfql
il**nyyhqnilfkvylksitvngigvn*shqkisnlsrvxhhsqikisslclfsfif*l
fyqlkfylmf*i*kdgdlv*yqvfiixfyxxghllxaqvyhmifyfy---

---een*fsyncmdmvtrscickcwyvcqyissciyvlllf*nin*sis*nlveiisykw
siipifnvirisnsipltryffksnpw*i*sfm*rlgciwfhngkqfnifnfih*flysn
ic**kifnkikiki*ikkk*kkrigkknffiyifntskkkkkkkkkkkkkk

Frame B:
lpfninilyihifyikyhflfffcfyffyyykkl*ikinkkfxqnvnfsfsklfglgsn*
fydeiitiriyfskfi*srlq*mglesinpikrfqiyrgcxtihk*kfhlyvyfplsfnc
fin*sfi*cfkykrmetwydirys*xnfmxxaicyxrrfii*sftfi---

---KRINFLTIAWTWLPGVAYASVGMFANTLVHVFMYYYYFRTSINPSVRIWWKSYLTSG
QLFQFSMSFVLAIPFLLQDISLNQTPGKFNHSCKGWGAFGFTMVNNLIFLILFINFYIQT
YVNRKSSTKSKLKSE*kknkkre*akkiflfiyltpqkkkkkkkkkkkkkk

Frame C:
ylli*ifyiyiyft*niifffffvfiffiiiksyrsk*IKNLXRMSTSVSPNYLDLVPID
FMMKLLPSEYTFQSLFEVDYSKWDWSQLIPSKDFKFIEGVXPFTNKNFIFMSIFLYLLTV
LSIKVLFNVLNIKGWRLGMISGIHNXILXVXPFVMXAGLSYDLLLLF---

---reliflqlhghgyqelhmqvlvclpih*fmylcitiilehqlihqlefggnhilqvv
nysnfqchsy*qfhssykifl*ikplvnliihvkvgvhlvsqw*ti*yf*fyslisifkh
mlienlqqnqn*nlnkkkikkenrqkkffylyi*hlkkkkkkkkkkkkkkk

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U16167-1 (Contig-U16167-1Q)
/CSM_Contig/Contig-U16167-1Q.Seq.d
(1019 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U16167-1 (Contig-U16167-1Q) /CSM_Contig/Conti... 1469 0.0
Contig-U05396-1 (Contig-U05396-1Q) /CSM_Contig/Conti... 54 4e-07
Contig-U06466-1 (Contig-U06466-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U09591-1 (Contig-U09591-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U03592-1 (Contig-U03592-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U15844-1 (Contig-U15844-1Q) /CSM_Contig/Conti... 38 0.026
Contig-U15738-1 (Contig-U15738-1Q) /CSM_Contig/Conti... 38 0.026
Contig-U15662-1 (Contig-U15662-1Q) /CSM_Contig/Conti... 38 0.026
Contig-U15308-1 (Contig-U15308-1Q) /CSM_Contig/Conti... 38 0.026
Contig-U14663-1 (Contig-U14663-1Q) /CSM_Contig/Conti... 38 0.026

>Contig-U16167-1 (Contig-U16167-1Q) /CSM_Contig/Contig-U16167-1Q.Seq.d
Length = 1019

Score = 1469 bits (741), Expect = 0.0
Identities = 789/789 (100%)
Strand = Plus / Plus


Query: 87 attattataaaaagttatagatcaaaataaataaaaaatttaancagaatgtcaacttca 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 attattataaaaagttatagatcaaaataaataaaaaatttaancagaatgtcaacttca 146


Query: 147 gtttctccaaattatttggacttggttccaattgattttatgatgaaattattaccatca 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gtttctccaaattatttggacttggttccaattgattttatgatgaaattattaccatca 206


Query: 207 gaatatacttttcaaagtttatttgaagtcgattacagtaaatgggattggagtcaatta 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaatatacttttcaaagtttatttgaagtcgattacagtaaatgggattggagtcaatta 266


Query: 267 atcccatcaaaagatttcaaatttatcgagggtgttncaccattcacaaataaaaatttc 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atcccatcaaaagatttcaaatttatcgagggtgttncaccattcacaaataaaaatttc 326


Query: 327 atctttatgtctattttcctttatcttttaactgttttatcaattaaagttttatttaat 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 atctttatgtctattttcctttatcttttaactgttttatcaattaaagttttatttaat 386


Query: 387 gttttaaatataaaaggatggagacttggtatgatatcaggtattcataattnaatttta 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gttttaaatataaaaggatggagacttggtatgatatcaggtattcataattnaatttta 446


Query: 447 tgngttnggccatttgttatgngcgcaggtttatcatatgatcttttacttttattcnnn 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgngttnggccatttgttatgngcgcaggtttatcatatgatcttttacttttattcnnn 506


Query: 507 nnnnnnngaagagaattaattttcttacaattgcatggacatggttaccaggagttgcat 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 nnnnnnngaagagaattaattttcttacaattgcatggacatggttaccaggagttgcat 566


Query: 567 atgcaagtgttggtatgtttgccaatacattagttcatgtatttatgtattactattatt 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atgcaagtgttggtatgtttgccaatacattagttcatgtatttatgtattactattatt 626


Query: 627 ttagaacatcaattaatccatcagttagaatttggtggaaatcatatcttacaagtggtc 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ttagaacatcaattaatccatcagttagaatttggtggaaatcatatcttacaagtggtc 686


Query: 687 aattattccaattttcaatgtcattcgtattagcaattccattcctcttacaagatattt 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 aattattccaattttcaatgtcattcgtattagcaattccattcctcttacaagatattt 746


Query: 747 ctttaaatcaaacccctggtaaatttaatcattcatgtaaaggttggggtgcatttggtt 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ctttaaatcaaacccctggtaaatttaatcattcatgtaaaggttggggtgcatttggtt 806


Query: 807 tcacaatggtaaacaatttaatatttttaattttattcattaatttctatattcaaacat 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 tcacaatggtaaacaatttaatatttttaattttattcattaatttctatattcaaacat 866


Query: 867 atgttaata 875
|||||||||
Sbjct: 867 atgttaata 875


>Contig-U05396-1 (Contig-U05396-1Q) /CSM_Contig/Contig-U05396-1Q.Seq.d
Length = 1086

Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus


Query: 590 aatacattagttcatgtatttatgtattact 620
|||||||| ||||||||||||||||||||||
Sbjct: 653 aatacattcgttcatgtatttatgtattact 683


>Contig-U06466-1 (Contig-U06466-1Q) /CSM_Contig/Contig-U06466-1Q.Seq.d
Length = 456

Score = 42.1 bits (21), Expect = 0.002
Identities = 21/21 (100%)
Strand = Plus / Minus


Query: 823 tttaatatttttaattttatt 843
|||||||||||||||||||||
Sbjct: 450 tttaatatttttaattttatt 430


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 29,592
Number of Sequences: 8402
Number of extensions: 29592
Number of successful extensions: 4546
Number of sequences better than 10.0: 692
length of query: 1019
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1003
effective length of database: 7,941,110
effective search space: 7964933330
effective search space used: 7964933330
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 3.19
Homology vs DNA
Query= Contig-U16167-1 (Contig-U16167-1Q) /CSM_Contig/Contig-U16167-1Q.Seq.d
(1019 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AC117073) Dictyostelium discoideum chromosome 2 map 6045872... 656 0.0 5
(C23663) Dictyostelium discoideum gamete cDNA, clone FC-AJ10. 718 0.0 1
(BJ413489) Dictyostelium discoideum cDNA clone:ddv15l22, 5' ... 470 e-173 2
(AU284526) Dictyostelium discoideum gamete cDNA clone:FC-BB1... 593 e-165 1
(BJ431879) Dictyostelium discoideum cDNA clone:ddv15l22, 3' ... 454 e-139 2
(CR962127) Medicago truncatula chromosome 5 clone mth2-181n9... 44 0.007 6
(AC115584) Dictyostelium discoideum chromosome 2 map complem... 38 0.007 7
(BM883828) rc23c11.y1 Meloidogyne hapla egg pAMP1 v1 Meloido... 54 0.011 1
(AU261824) Dictyostelium discoideum vegetative cDNA clone:VS... 46 0.029 2
(ER351375) 1092347001781 Global-Ocean-Sampling_GS-34-01-01-1... 36 0.034 2
(AU263823) Dictyostelium discoideum vegetative cDNA clone:VS... 46 0.039 2
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome. 32 0.087 9
(AU262827) Dictyostelium discoideum vegetative cDNA clone:VS... 46 0.11 2
(AQ945516) Sheared DNA-45J12.TR Sheared DNA Trypanosoma bruc... 46 0.12 2
(AM477557) Vitis vinifera contig VV78X095071.3, whole genome... 36 0.12 5
(AC190138) Trichinella spiralis BAC clone TS195-49H12 from c... 50 0.16 1
(AL359332) Human chromosome 14 DNA sequence BAC R-403E10 of ... 50 0.16 1
(AL359212) Human chromosome 14 DNA sequence BAC R-10A2 of li... 50 0.16 1
(AC119756) Rattus norvegicus clone CH230-189P9, *** SEQUENCI... 50 0.16 1
(AC090073) Homo sapiens chromosome 5 clone CTD-3221I19, WORK... 50 0.16 1
(AC016481) Homo sapiens clone RP11-30H11, WORKING DRAFT SEQU... 50 0.16 1
(EF533701) Glycine max clone BAC GM_WBb095P01, complete sequ... 44 0.17 5
(AF260826) Cochliomyia hominivorax mitochondrion, complete g... 32 0.22 6
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 36 0.29 7
(AC154203) Mus musculus BAC clone RP24-387L1 from chromosome... 38 0.36 2
(U88631) Lucilia cuprina acetylcholinesterase mRNA, complete... 34 0.44 2
(CU062492) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.54 4
(EK508898) 1095515468971 Global-Ocean-Sampling_GS-32-01-01-1... 38 0.63 2
(BX321910) Zebrafish DNA sequence from clone DKEYP-25B4 in l... 48 0.65 1
(AP008213) Oryza sativa (japonica cultivar-group) genomic DN... 48 0.65 1
(AP004668) Oryza sativa Japonica Group genomic DNA, chromoso... 48 0.65 1
(AP004395) Oryza sativa Japonica Group genomic DNA, chromoso... 48 0.65 1
(AL445487) Human DNA sequence from clone RP11-417L14 on chro... 48 0.65 1
(AL157763) Human DNA sequence from clone RP11-27D9 on chromo... 48 0.65 1
(AC149752) Bos taurus clone CH240-336F19, WORKING DRAFT SEQU... 48 0.65 1
(CU929247) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.65 1
(AC068376) Homo sapiens chromosome 3 clone RP11-817B15 map 3... 48 0.65 1
(CR391963) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.65 1
(CR352211) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.65 1
(AC164960) Bos taurus clone CH240-162J18, WORKING DRAFT SEQU... 48 0.65 1
(EJ515454) 1092955085023 Global-Ocean-Sampling_GS-29-01-01-1... 48 0.65 1
(CP000776) Campylobacter hominis ATCC BAA-381, complete genome. 48 0.65 1
(ER859288) POTL491TF Solanum tuberosum RHPOTKEY BAC ends Sol... 34 0.75 3
(AM426893) Vitis vinifera contig VV78X229083.12, whole genom... 40 0.84 3
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s... 40 0.87 10
(AC218602) Bos taurus clone CH240-29C6, WORKING DRAFT SEQUEN... 42 0.87 6
(BX470119) Zebrafish DNA sequence from clone CH211-225L4 in ... 40 0.99 2
(AC114258) Dictyostelium discoideum chromosome 2 map complem... 40 1.0 4
(ET950472) CHO_OF449xn08f2.ab1 CHO_OF Nicotiana tabacum geno... 32 1.1 3
(AX348912) Sequence 370 from Patent WO0202807. 42 1.1 4
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 34 1.1 5
(AC008603) Homo sapiens chromosome 5 clone CTB-107P3, comple... 34 1.3 5
(CU695126) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 1.3 2
(BX548009) Zebrafish DNA sequence from clone CH211-237K17 in... 36 1.4 2
(CU424451) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 1.4 4
(AC202826) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB... 44 1.5 7
(AZ530928) ENTBR71TR Entamoeba histolytica Sheared DNA Entam... 32 1.7 2
(CU570992) Zebrafish DNA sequence from clone DKEY-37N24 in l... 42 1.7 5
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7... 40 1.8 8
(BP160923) Sus scrofa mRNA, clone:THY010043B04, 5' end, expr... 36 1.8 2
(CZ544219) SRAA-aad54f05.g1 Strongyloides ratti whole genome... 38 1.8 2
(AJ422212) Lucilia sericata complete mitochondrial genome. 32 1.9 5
(AC130805) Medicago truncatula clone mth2-9n1, complete sequ... 38 1.9 5
(CR762421) Zebrafish DNA sequence from clone DKEYP-15D8 in l... 40 2.0 3
(DC219005) Plasmodium berghei strain ANKA cDNA clone:MZ00036... 38 2.0 2
(DC218941) Plasmodium berghei strain ANKA cDNA clone:MZ00027... 38 2.1 2
(AC137822) Medicago truncatula clone mth2-31e20, complete se... 40 2.1 4
(EJ043257) 1095454102943 Global-Ocean-Sampling_GS-26-01-01-1... 42 2.2 2
(EK391801) 1095469505123 Global-Ocean-Sampling_GS-31-01-01-1... 38 2.2 2
(AE017263) Mesoplasma florum L1 complete genome. 32 2.2 15
(AM441691) Vitis vinifera, whole genome shotgun sequence, co... 34 2.4 3
(BX936436) Zebrafish DNA sequence from clone DKEY-16H19 in l... 46 2.6 1
(AC132083) Mus musculus BAC clone RP24-540G23 from chromosom... 46 2.6 1
(AC122522) Mus musculus BAC clone RP24-486D23 from chromosom... 46 2.6 1
(AC202610) Macaca mulatta BAC CH250-366O3 (Children's Hospi... 46 2.6 1
(AM474428) Vitis vinifera contig VV78X056850.3, whole genome... 46 2.6 1
(AM469105) Vitis vinifera contig VV78X055418.6, whole genome... 46 2.6 1
(Z22180) Caenorhabditis elegans Cosmid K11H3. 46 2.6 1
(AF067608) Caenorhabditis elegans cosmid B0511, complete seq... 46 2.6 1
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 46 2.6 1
(AC108174) Homo sapiens chromosome 5 clone RP11-78C3, comple... 46 2.6 1
(AC004843) Homo sapiens PAC clone RP4-612F12 from 7, complet... 46 2.6 1
(AC133918) Homo sapiens chromosome 16 clone RP11-188C14, WOR... 46 2.6 1
(AC098506) Rattus norvegicus clone CH230-64B13, *** SEQUENCI... 46 2.6 1
(CU570718) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.6 1
(CU062562) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.6 1
(AC222779) Bos taurus clone CH240-439B21, WORKING DRAFT SEQU... 46 2.6 1
(AC212364) Zea mays chromosome 2 clone CH201-292L14; ZMMBBc0... 46 2.6 1
(AC203828) Zea mays chromosome 2 clone CH201-548L3; ZMMBBc05... 46 2.6 1
(AZ137858) SP_0180_A2_D06_T7A Strongylocentrotus purpuratus,... 46 2.6 1
(ER565340) 1093015766980 Global-Ocean-Sampling_GS-36-01-01-2... 46 2.6 1
(ER489524) 1093015319922 Global-Ocean-Sampling_GS-35-01-01-1... 46 2.6 1
(EK358209) 1095468758375 Global-Ocean-Sampling_GS-31-01-01-1... 46 2.6 1
(EJ857443) 1093017951882 Global-Ocean-Sampling_GS-30-02-01-1... 46 2.6 1
(EJ150518) 1092343756394 Global-Ocean-Sampling_GS-27-01-01-1... 46 2.6 1
(CT563039) A BAC library has been constructed from cultivar ... 46 2.6 1
(CT329789) Sus scrofa genomic clone CH242-356N20, genomic su... 46 2.6 1
(CR912496) Sus scrofa BES. 46 2.6 1
(AG634853) Macaca fuscata fuscata DNA, clone: MSB2-038J01_R,... 46 2.6 1
(CL107179) ISB1-47O14_T7.1 ISB1 Xenopus (Silurana) tropicali... 46 2.6 1
(CG373416) OG5BD61TC ZM_0.7_1.5_KB Zea mays genomic clone ZM... 46 2.6 1
(CG144240) PUFOG54TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 46 2.6 1
(BZ964687) PUDFC83TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 46 2.6 1
(AG195423) Pan troglodytes DNA, clone: RP43-074G09.T7. 46 2.6 1
(ES546671) TF1004C01pTV TF1 Tribolium castaneum cDNA, mRNA s... 46 2.6 1
(ES545202) TB1005F01pTV TB1 Tribolium castaneum cDNA, mRNA s... 46 2.6 1
(DT796254) 127416656 TL1 Tribolium castaneum cDNA clone 83I1... 46 2.6 1
(DN755970) GL-Cf-12766 GLGC-LIB0001-cf Canis familiaris Norm... 46 2.6 1
(CT808283) Paramecium tetraurelia 5-PRIME EST from clone LK0... 46 2.6 1
(CT781628) Paramecium tetraurelia 5-PRIME EST from clone LK0... 46 2.6 1
(CD451011) USDA-FP_103049 Adult Alate Brown Citrus Aphid Tox... 46 2.6 1
(GE324731) OXBB-aaa52e01.b1 Oxytricha_pSMART_OXBB Sterkiella... 46 2.6 1
(FC676771) CAXX11543.fwd CAXX Lottia gigantea from male gona... 46 2.6 1
(CP000896) Acholeplasma laidlawii PG-8A, complete genome. 46 2.6 1
(AC140960) Papio anubis clone RP41-467F17, WORKING DRAFT SEQ... 40 2.6 8
(AL356112) Human DNA sequence *** SEQUENCING CANCELLED *** f... 34 2.7 4
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 34 2.7 7
(BX469896) Zebrafish DNA sequence from clone DKEY-52L6 in li... 38 2.7 4
(AM435322) Vitis vinifera contig VV78X047008.4, whole genome... 36 2.8 2
(AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5... 36 2.8 7
(AL590155) Zebrafish DNA sequence from clone RP71-79P20 in l... 40 2.9 4
(AM450616) Vitis vinifera contig VV78X061582.5, whole genome... 40 3.1 2
(AP000638) Homo sapiens genomic DNA, chromosome 11q22 clone:... 42 3.1 3
(AB217841) Clostridium botulinum D phage DNA, downstream reg... 44 3.2 2
(CU442752) Pig DNA sequence from clone CH242-52J8 on chromos... 38 3.6 4
(DX555839) GH_MBb0081K02f GH_MBb Gossypium hirsutum genomic ... 44 3.6 2
(CU469301) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 3.8 4
(AC132771) Rattus norvegicus clone CH230-54J13, *** SEQUENCI... 36 3.9 8
(AC186383) Pan troglodytes BAC clone CH251-720I22 from chrom... 40 3.9 4
(AJ606780) Mesobuthus gibbosus partial lys-C gene for lysozy... 34 4.0 3
(AC185970) Pan troglodytes chromosome 6 clone CH251-677J18, ... 40 4.3 4
(AM440624) Vitis vinifera contig VV78X065467.16, whole genom... 32 4.4 5
(CR936985) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 32 4.6 2
(AC220635) Bos taurus clone CH240-351E9, WORKING DRAFT SEQUE... 40 4.7 4
(EK060408) 1092960075558 Global-Ocean-Sampling_GS-31-01-01-1... 32 4.7 3
(CR387933) Zebrafish DNA sequence from clone DKEY-81L17 in l... 32 4.8 2
(BX936333) Zebrafish DNA sequence from clone CH211-90O16 in ... 32 4.9 2
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 42 5.2 17
(AM466931) Vitis vinifera contig VV78X112207.5, whole genome... 36 5.2 2
(AC216413) Populus trichocarpa clone POP035-J17, complete se... 32 5.3 7
(CR932968) Medicago truncatula chromosome 5 clone mth2-8e17,... 36 5.4 4
(AM486718) Vitis vinifera contig VV78X171089.11, whole genom... 40 5.7 3
(EK026368) 1092955368531 Global-Ocean-Sampling_GS-31-01-01-1... 32 5.7 3
(CK241644) rx32a06.y1 Meloidogyne paranaensis egg SL1 pGEM M... 38 6.2 2
(AC146397) Pan troglodytes chromosome 7 clone RP43-52G7, WOR... 40 6.2 5
(CK241501) rx30d01.y1 Meloidogyne paranaensis egg SL1 pGEM M... 38 6.2 2
(BX957233) Zebrafish DNA sequence from clone DKEY-224H10 in ... 34 6.4 5
(BX169875) Danio rerio genomic clone DKEY-176J17, genomic su... 32 6.5 2
(DR392066) USDA-FP_151998 Adult Alate Aphis gossypii (WHAGA)... 34 6.5 2
(DR392518) USDA-FP_152450 Adult Alate Aphis gossypii (WHAGA)... 34 6.6 2
(DR392923) USDA-FP_152855 Adult Alate Aphis gossypii (WHAGA)... 34 6.6 2
(DR390188) USDA-FP_150008 Adult Alate Aphis gossypii (WHAGA)... 34 6.6 2
(DR390917) USDA-FP_150849 Adult Alate Aphis gossypii (WHAGA)... 34 6.6 2
(DR396509) USDA-FP_156447 Adult Alate Aphis gossypii (WHAGA)... 34 6.6 2
(DR396601) USDA-FP_156540 Adult Alate Aphis gossypii (WHAGA)... 34 6.6 2
(DR395281) USDA-FP_155216 Adult Alate Aphis gossypii (WHAGA)... 34 6.6 2
(DR393518) USDA-FP_153450 Adult Alate Aphis gossypii (WHAGA)... 34 6.6 2
(DR396026) USDA-FP_155961 Adult Alate Aphis gossypii (WHAGA)... 34 6.6 2
(DR389605) USDA-FP_149425 Adult Alate Aphis gossypii (WHAGA)... 34 6.6 2
(DR389368) USDA-FP_149188 Adult Alate Aphis gossypii (WHAGA)... 34 6.7 2
(DR390101) USDA-FP_149921 Adult Alate Aphis gossypii (WHAGA)... 34 6.7 2
(DR394614) USDA-FP_154549 Adult Alate Aphis gossypii (WHAGA)... 34 6.7 2
(BV021210) S212P60516FF11.T0 CZECHII/Ei Mus musculus STS gen... 34 6.8 2
(AC208287) Nomascus leucogenys leucogenys clone CH271-98A15,... 42 7.3 3
(AC150022) Papio anubis clone RP41-3B24, WORKING DRAFT SEQUE... 40 7.3 3
(CW397771) fsbb001f086o19k0 Sorghum methylation filtered lib... 34 7.5 2
(AM442512) Vitis vinifera contig VV78X149751.2, whole genome... 32 7.5 5
(AM438664) Vitis vinifera contig VV78X157959.20, whole genom... 34 7.5 4
(EJ789621) 1093017370646 Global-Ocean-Sampling_GS-30-02-01-1... 42 7.7 2
(ED749227) GM_WBb0114O10.r GM_WBb Glycine max genomic clone ... 42 7.9 2
(AE014852) Plasmodium falciparum 3D7 chromosome 12, section ... 36 7.9 9
(ED792089) GM_WBb0175M09.f GM_WBb Glycine max genomic clone ... 42 8.0 2
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 36 8.1 9
(AB284537) Polistes chinensis gene for 16S rRNA, partial seq... 38 8.1 2
(AX346287) Sequence 1358 from Patent WO0200928. 40 8.2 4
(AC166027) Oryctolagus cuniculus clone LB1-6G14, WORKING DRA... 44 8.3 5
(AC073210) Homo sapiens BAC clone RP11-460N20 from 7, comple... 40 8.3 3
(EI483643) PV_GBa0097A17.f PV_GBa Phaseolus vulgaris genomic... 30 8.6 3
(BX640463) Zebrafish DNA sequence from clone DKEY-29P10 in l... 34 8.7 6
(AL035476) Plasmodium falciparum MAL4P3. 40 9.1 11
(EJ082568) 1095460058856 Global-Ocean-Sampling_GS-26-01-01-1... 42 9.2 2
(EK336769) 1095467045065 Global-Ocean-Sampling_GS-31-01-01-1... 40 9.2 2
(EJ463967) 1095388004011 Global-Ocean-Sampling_GS-28-01-01-1... 38 9.3 2
(EJ987786) 1093023023510 Global-Ocean-Sampling_GS-30-02-01-1... 42 9.3 2
(EJ810624) 1093017487518 Global-Ocean-Sampling_GS-30-02-01-1... 42 9.3 2
(EJ799286) 1093017418110 Global-Ocean-Sampling_GS-30-02-01-1... 42 9.3 2
(EJ844125) 1093017846614 Global-Ocean-Sampling_GS-30-02-01-1... 42 9.4 2
(CR735103) Zebrafish DNA sequence from clone CH211-13L14 in ... 32 9.6 7
(AC209189) Populus trichocarpa clone POP078-I10, complete se... 38 9.7 4
(CS468863) Sequence 54 from Patent EP1748080. 36 9.7 7
(CS419340) Sequence 54 from Patent WO2006094836. 36 9.7 7
(EJ827221) 1093017566516 Global-Ocean-Sampling_GS-30-02-01-1... 42 9.9 2

>(AC117073) Dictyostelium discoideum chromosome 2 map 6045872-6061342
strain AX4, complete sequence.
Length = 15470

Score = 656 bits (331), Expect(5) = 0.0
Identities = 334/335 (99%)
Strand = Plus / Plus


Query: 542 tggacatggttaccaggagttgcatatgcaagtgttggtatgtttgccaatacattagtt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4660 tggacatggttaccaggagttgcatatgcaagtgttggtatgtttgccaatacattagtt 4719


Query: 602 catgtatttatgtattactattattttagaacatcaattaatccatcagttagaatttgg 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4720 catgtatttatgtattactattattttagaacatcaattaatccatcagttagaatttgg 4779


Query: 662 tggaaatcatatcttacaagtggtcaattattccaattttcaatgtcattcgtattagca 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4780 tggaaatcatatcttacaagtggtcaattattccaattttcaatgtcattcgtattagca 4839


Query: 722 attccattcctcttacaagatatttctttaaatcaaacccctggtaaatttaatcattca 781
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4840 attccattcctcttacaagatatttctttaaatcaaaccactggtaaatttaatcattca 4899


Query: 782 tgtaaaggttggggtgcatttggtttcacaatggtaaacaatttaatatttttaatttta 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4900 tgtaaaggttggggtgcatttggtttcacaatggtaaacaatttaatatttttaatttta 4959


Query: 842 ttcattaatttctatattcaaacatatgttaatag 876
|||||||||||||||||||||||||||||||||||
Sbjct: 4960 ttcattaatttctatattcaaacatatgttaatag 4994

Score = 377 bits (190), Expect(5) = 0.0
Identities = 192/193 (99%)
Strand = Plus / Plus


Query: 137 gtcaacttcagtttctccaaattatttggacttggttccaattgattttatgatgaaatt 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3845 gtcaacttcagtttctccaaattatttggacttggttccaattgattttatgatgaaatt 3904


Query: 197 attaccatcagaatatacttttcaaagtttatttgaagtcgattacagtaaatgggattg 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3905 attaccatcagaatatacttttcaaagtttatttgaagtcgattacagtaaatgggattg 3964


Query: 257 gagtcaattaatcccatcaaaagatttcaaatttatcgagggtgttncaccattcacaaa 316
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3965 gagtcaattaatcccatcaaaagatttcaaatttatcgagggtgttacaccattcacaaa 4024


Query: 317 taaaaatttcatc 329
|||||||||||||
Sbjct: 4025 taaaaatttcatc 4037

Score = 170 bits (86), Expect(5) = 0.0
Identities = 97/102 (95%)
Strand = Plus / Plus


Query: 402 ggatggagacttggtatgatatcaggtattcataattnaattttatgngttnggccattt 461
||||||||||||||||||||||||||||||||||||| ||||||||| ||| || |||||
Sbjct: 4270 ggatggagacttggtatgatatcaggtattcataatttaattttatgtgtttggtcattt 4329


Query: 462 gttatgngcgcaggtttatcatatgatcttttacttttattc 503
|||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4330 gttatgtgcgcaggtttatcatatgatcttttacttttattc 4371

Score = 95.6 bits (48), Expect(5) = 0.0
Identities = 50/51 (98%)
Strand = Plus / Plus


Query: 87 attattataaaaagttatagatcaaaataaataaaaaatttaancagaatg 137
||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3547 attattataaaaagttatagatcaaaataaataaaaaatttaaacagaatg 3597

Score = 40.1 bits (20), Expect(5) = 0.0
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 516 agagaattaattttcttaca 535
||||||||||||||||||||
Sbjct: 4606 agagaattaattttcttaca 4625

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 988,632,945
Number of extensions: 71628220
Number of successful extensions: 7012838
Number of sequences better than 10.0: 196
Length of query: 1019
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 995
Effective length of database: 96,409,374,237
Effective search space: 95927327365815
Effective search space used: 95927327365815
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.20
Homology vs Protein
Query= Contig-U16167-1 (Contig-U16167-1Q) /CSM_Contig/Contig-U16167-1Q.Seq.d
(1019 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC117073_2(AC117073|pid:none) Dictyostelium discoideum chromosom... 224 4e-57
BT076365_1(BT076365|pid:none) Caligus rogercresseyi clone crog-e... 59 2e-07
(A1L3X0) RecName: Full=Elongation of very long chain fatty acids... 56 2e-06
BT080978_1(BT080978|pid:none) Caligus clemensi clone ccle-evs-50... 56 2e-06
AC116957_93(AC116957|pid:none) Dictyostelium discoideum chromoso... 56 2e-06
BT076352_1(BT076352|pid:none) Caligus rogercresseyi clone crog-e... 55 3e-06
AK037162_1(AK037162|pid:none) Mus musculus 6 days neonate skin c... 55 4e-06
BC072173_1(BC072173|pid:none) Xenopus laevis hypothetical protei... 55 4e-06
BT077118_1(BT077118|pid:none) Caligus rogercresseyi clone crog-e... 54 7e-06
BT080790_1(BT080790|pid:none) Caligus clemensi clone ccle-evs-50... 54 7e-06
BC044967_1(BC044967|pid:none) Xenopus laevis hypothetical protei... 54 7e-06
AY605098_1(AY605098|pid:none) Xenopus laevis polyunsaturated fat... 54 7e-06
BT078005_1(BT078005|pid:none) Lepeophtheirus salmonis Pacific fo... 54 1e-05
(Q2KJD9) RecName: Full=Elongation of very long chain fatty acids... 53 1e-05
EU747336_1(EU747336|pid:none) Sus scrofa elongase mRNA, partial ... 53 2e-05
AK302948_1(AK302948|pid:none) Homo sapiens cDNA FLJ52813 complet... 53 2e-05
(Q8BHI7) RecName: Full=Elongation of very long chain fatty acids... 53 2e-05
AK045274_1(AK045274|pid:none) Mus musculus 9.5 days embryo parth... 53 2e-05
(Q9NYP7) RecName: Full=Elongation of very long chain fatty acids... 53 2e-05
AK088153_1(AK088153|pid:none) Mus musculus 2 days neonate thymus... 53 2e-05
BT077152_1(BT077152|pid:none) Caligus rogercresseyi clone crog-e... 53 2e-05
(Q4R516) RecName: Full=Elongation of very long chain fatty acids... 53 2e-05
BC154147_1(BC154147|pid:none) Danio rerio zgc:112263, mRNA (cDNA... 52 3e-05
CT025742_10(CT025742|pid:none) Zebrafish DNA sequence from clone... 52 3e-05
AE013599_2922(AE013599|pid:none) Drosophila melanogaster chromos... 52 3e-05
(Q920L7) RecName: Full=Elongation of very long chain fatty acids... 52 3e-05
BC054983_1(BC054983|pid:none) Xenopus laevis hypothetical protei... 52 4e-05
AB449110_1(AB449110|pid:none) Mortierella alpina MAELO gene for ... 52 4e-05
AF268031_1(AF268031|pid:none) Mortierella alpina long chain fatt... 52 4e-05
AY660880_1(AY660880|pid:none) Clarias gariepinus fatty acid elon... 51 6e-05
AY660881_1(AY660881|pid:none) Gadus morhua fatty acid elongase m... 51 6e-05
BC155281_1(BC155281|pid:none) Danio rerio ELOVL family member 7,... 51 6e-05
BT077312_1(BT077312|pid:none) Caligus rogercresseyi clone crog-e... 51 6e-05
BC155205_1(BC155205|pid:none) Danio rerio elongation of very lon... 51 7e-05
CR760398_1(CR760398|pid:none) Xenopus tropicalis finished cDNA, ... 51 7e-05
BC049330_1(BC049330|pid:none) Danio rerio elongation of very lon... 51 7e-05
FN357308_40(FN357308|pid:none) Schistosoma mansoni genome sequen... 50 1e-04
BT080322_1(BT080322|pid:none) Caligus clemensi clone ccle-evs-51... 50 1e-04
BT076206_1(BT076206|pid:none) Caligus rogercresseyi clone crog-e... 50 1e-04
AM920436_1883(AM920436|pid:none) Penicillium chrysogenum Wiscons... 50 1e-04
AE014297_1080(AE014297|pid:none) Drosophila melanogaster chromos... 50 1e-04
AY605099_1(AY605099|pid:none) Ciona intestinalis polyunsaturated... 50 1e-04
AE013599_2923(AE013599|pid:none) Drosophila melanogaster chromos... 50 2e-04
BC051608_1(BC051608|pid:none) Danio rerio ELOVL family member 7,... 49 2e-04
AE014297_1079(AE014297|pid:none) Drosophila melanogaster chromos... 49 3e-04
DQ216939_1(DQ216939|pid:none) Taeniopygia guttata clone 0064P001... 49 4e-04
BT078466_1(BT078466|pid:none) Lepeophtheirus salmonis Pacific fo... 49 4e-04
(P39540) RecName: Full=Elongation of fatty acids protein 1; &S4... 49 4e-04
AF532782_1(AF532782|pid:none) Danio rerio polyunsaturated fatty ... 49 4e-04
AB264656_1(AB264656|pid:none) Papilio xuthus mRNA for similar to... 48 5e-04
AJ851805_1(AJ851805|pid:none) Gallus gallus mRNA for hypothetica... 48 5e-04
DQ067616_1(DQ067616|pid:none) Oncorhynchus masou putative polyun... 48 5e-04
AE014296_2020(AE014296|pid:none) Drosophila melanogaster chromos... 48 5e-04
AE014297_3303(AE014297|pid:none) Drosophila melanogaster chromos... 48 5e-04
AE014296_2019(AE014296|pid:none) Drosophila melanogaster chromos... 48 5e-04
AK342964_1(AK342964|pid:none) Acyrthosiphon pisum ACYPI003344 mR... 48 6e-04
AF336793_1(AF336793|pid:none) Homo sapiens SSC1/ELOVL1 mRNA, com... 47 8e-04
AK001653_1(AK001653|pid:none) Homo sapiens cDNA FLJ10791 fis, cl... 47 8e-04
AK298163_1(AK298163|pid:none) Homo sapiens cDNA FLJ51720 complet... 47 8e-04
(Q9BW60) RecName: Full=Elongation of very long chain fatty acids... 47 8e-04
AK003743_1(AK003743|pid:none) Mus musculus 18-day embryo whole b... 47 8e-04
(Q9JLJ5) RecName: Full=Elongation of very long chain fatty acids... 47 8e-04
AY660879_1(AY660879|pid:none) Sparus aurata fatty acid elongase ... 47 8e-04
AF104033_1(AF104033|pid:none) Mus musculus MUEL protein mRNA, pa... 47 8e-04
BC083417_1(BC083417|pid:none) Danio rerio elongation of very lon... 47 0.001
AY318871_68(AY318871|pid:none) Canarypox virus strain ATCC VR-11... 47 0.001
AK341724_1(AK341724|pid:none) Acyrthosiphon pisum ACYPI007931 mR... 47 0.001
AY170326_1(AY170326|pid:none) Oreochromis niloticus putative pol... 47 0.001
AE014297_100(AE014297|pid:none) Drosophila melanogaster chromoso... 46 0.002
(Q32NI8) RecName: Full=Elongation of very long chain fatty acids... 46 0.002
(Q9EQC4) RecName: Full=Elongation of very long chain fatty acids... 46 0.002
AE017343_12(AE017343|pid:none) Cryptococcus neoformans var. neof... 46 0.002
FJ440239_1(FJ440239|pid:none) Rachycentron canadum polyunsaturat... 46 0.002
AY576803_1(AY576803|pid:none) Hortaea werneckii putative fatty a... 46 0.002
AK222498_1(AK222498|pid:none) Homo sapiens mRNA for elongation o... 46 0.002
CU640366_1226(CU640366|pid:none) Podospora anserina genomic DNA ... 46 0.002
AY605100_1(AY605100|pid:none) Oncorhynchus mykiss polyunsaturate... 46 0.002
AE014297_1081(AE014297|pid:none) Drosophila melanogaster chromos... 46 0.002
FJ156735_1(FJ156735|pid:none) Thunnus maccoyii fatty acid elonga... 45 0.003
BC100190_1(BC100190|pid:none) Xenopus laevis hypothetical protei... 45 0.003
(Q5M8U1) RecName: Full=Elongation of very long chain fatty acids... 45 0.003
CS020089_1(CS020089|pid:none) Sequence 43 from Patent WO20050123... 45 0.004
FJ952143_1(FJ952143|pid:none) Nibea mitsukurii polyunsaturated f... 45 0.004
BC152203_1(BC152203|pid:none) Danio rerio elongation of very lon... 45 0.004
FN392321_615(FN392321|pid:none) Pichia pastoris GS115 chromosome... 45 0.004
AB270614_1(AB270614|pid:none) Pichia angusta HpELO2 gene for fat... 45 0.004
BX294020_14(BX294020|pid:none) Neurospora crassa DNA linkage gro... 45 0.005
X78326_1(X78326|pid:none) S.cerevisiae SUR4 gene. 45 0.005
EF055875_1(EF055875|pid:none) Marsupenaeus japonicus elongation ... 45 0.005
FM992688_1180(FM992688|pid:none) Candida dubliniensis CD36 chrom... 45 0.005
BC080108_1(BC080108|pid:none) Xenopus laevis MGC84669 protein, m... 45 0.005
BC060809_1(BC060809|pid:none) Homo sapiens elongation of very lo... 44 0.007
BC114786_1(BC114786|pid:none) Bos taurus elongation of very long... 44 0.007
BC136017_1(BC136017|pid:none) Xenopus tropicalis elongation of v... 44 0.007
FN357317_24(FN357317|pid:none) Schistosoma mansoni genome sequen... 44 0.007
AK014803_1(AK014803|pid:none) Mus musculus adult male testis cDN... 44 0.007
FJ237532_1(FJ237532|pid:none) Salmo salar polyunsaturated fatty ... 44 0.007
AY591338_1(AY591338|pid:none) Thalassiosira pseudonana polyunsat... 44 0.009
CS020131_1(CS020131|pid:none) Sequence 85 from Patent WO20050123... 44 0.009
CS020107_1(CS020107|pid:none) Sequence 61 from Patent WO20050123... 44 0.009
DQ439986_1(DQ439986|pid:none) Aedes aegypti clone AE-11159 fatty... 44 0.009
BC095785_1(BC095785|pid:none) Danio rerio elongation of very lon... 44 0.009
BC115092_1(BC115092|pid:none) Danio rerio elongation of very lon... 44 0.009
AE016819_857(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 44 0.009
BC059658_1(BC059658|pid:none) Danio rerio zgc:73341, mRNA (cDNA ... 44 0.009
AF187070_1(AF187070|pid:none) Dictyostelium discoideum steroid i... 44 0.012
CR382128_803(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 43 0.015
AE014297_3312(AE014297|pid:none) Drosophila melanogaster chromos... 43 0.015
AF465520_1(AF465520|pid:none) Scophthalmus maximus polyunsaturat... 43 0.015
CR382123_151(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 43 0.020
(P25358) RecName: Full=Elongation of fatty acids protein 2; AltN... 43 0.020
BX323588_5(BX323588|pid:none) Zebrafish DNA sequence from clone ... 43 0.020
CU928168_569(CU928168|pid:none) Kluyveromyces thermotolerans str... 43 0.020
AM989988_4(AM989988|pid:none) Zygosaccharomyces rouxii strain CB... 42 0.026
CR380958_355(CR380958|pid:none) Candida glabrata strain CBS138 c... 42 0.026
CP000496_187(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 42 0.026
CU928170_156(CU928170|pid:none) Kluyveromyces thermotolerans str... 42 0.026
FM992689_297(FM992689|pid:none) Candida dubliniensis CD36 chromo... 42 0.026
CR382122_310(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 42 0.026
AY591336_1(AY591336|pid:none) Ostreococcus tauri polyunsaturated... 42 0.034
CR954209_255(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 42 0.034
CS020125_1(CS020125|pid:none) Sequence 79 from Patent WO20050123... 42 0.034
EF123104_1(EF123104|pid:none) Aureobasidium pullulans putative f... 42 0.034
FN392321_239(FN392321|pid:none) Pichia pastoris GS115 chromosome... 42 0.045
DQ517337_46(DQ517337|pid:none) Trichoplusia ni ascovirus 2c, com... 42 0.045
AX814556_1(AX814556|pid:none) Sequence 1 from Patent WO03064638.... 41 0.058
FJ851689_1(FJ851689|pid:none) Parietochloris incisa isolate H430... 41 0.058
FJ539086_1(FJ539086|pid:none) Parietochloris incisa delta-6 poly... 41 0.058
AE014297_3374(AE014297|pid:none) Drosophila melanogaster chromos... 40 0.100
BT023370_1(BT023370|pid:none) Drosophila melanogaster IP10355 fu... 40 0.100
AK074748_1(AK074748|pid:none) Homo sapiens cDNA FLJ90267 fis, cl... 40 0.13
AE014297_3541(AE014297|pid:none) Drosophila melanogaster chromos... 40 0.13
CR382139_442(CR382139|pid:none) Debaryomyces hansenii strain CBS... 40 0.13
BT022383_1(BT022383|pid:none) Drosophila melanogaster IP08078 fu... 40 0.13
EF541114_1(EF541114|pid:none) Phaeodactylum tricornutum delta-6-... 40 0.13
AY746355_1(AY746355|pid:none) Phaeodactylum tricornutum delta-6-... 40 0.13
AE016819_819(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 40 0.17
AB238914_1(AB238914|pid:none) Physcomitrella patens PSE1 gene fo... 40 0.17
CU928174_311(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 40 0.17
EF486525_1(EF486525|pid:none) Pavlova viridis C20 elongase (ELKJ... 39 0.22
Z68749_3(Z68749|pid:none) Caenorhabditis elegans Cosmid F56H11, ... 39 0.22
FN357422_17(FN357422|pid:none) Schistosoma mansoni genome sequen... 39 0.29
GN042640_1(GN042640|pid:none) Sequence 5 from Patent WO2009016208. 39 0.38
(Q7LKX0) RecName: Full=Putative elongation of fatty acids protei... 39 0.38
CP001329_254(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 38 0.49
CP001332_234(CP001332|pid:none) Micromonas sp. RCC299 chromosome... 38 0.65
AY630573_1(AY630573|pid:none) Pavlova sp. CCMP459 C20-polyunsatu... 38 0.65
GM840770_1(GM840770|pid:none) Sequence 410 from Patent WO2008124... 37 1.4
GM840543_1(GM840543|pid:none) Sequence 183 from Patent WO2008124... 37 1.4
AF206662_1(AF206662|pid:none) Mortierella alpina long chain poly... 37 1.4
CU633900_552(CU633900|pid:none) Podospora anserina genomic DNA c... 36 1.9
AJ608934_1(AJ608934|pid:none) Gossypium hirsutum mRNA for long c... 36 1.9
AP007157_171(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 36 1.9
CP000582_340(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 36 2.5
AM502223_117(AM502223|pid:none) Leishmania infantum chromosome 5. 36 2.5
AY591335_1(AY591335|pid:none) Ostreococcus tauri polyunsaturated... 35 3.2
FB661741_1(FB661741|pid:none) Sequence 25 from Patent WO20071239... 35 3.2
EU846098_1(EU846098|pid:none) Myrmecia incisa polyunsaturated fa... 35 4.2
FJ039823_1(FJ039823|pid:none) Kabatiella microsticta strain CBS ... 34 9.3
FJ039841_1(FJ039841|pid:none) Aureobasidium pullulans var. nov. ... 34 9.3
FJ039848_1(FJ039848|pid:none) Kabatiella microsticta strain CBS ... 34 9.3
FJ039810_1(FJ039810|pid:none) Aureobasidium pullulans var. melan... 34 9.3
FJ039813_1(FJ039813|pid:none) Aureobasidium pullulans var. melan... 34 9.3
FJ039819_1(FJ039819|pid:none) Aureobasidium pullulans var. melan... 34 9.3
FJ039847_1(FJ039847|pid:none) Selenophoma mahoniae strain CBS 38... 34 9.3
FJ039820_1(FJ039820|pid:none) Aureobasidium pullulans var. melan... 34 9.3
FJ039812_1(FJ039812|pid:none) Aureobasidium pullulans var. melan... 34 9.3
FJ039816_1(FJ039816|pid:none) Aureobasidium pullulans var. melan... 34 9.3

>AC117073_2(AC117073|pid:none) Dictyostelium discoideum chromosome 2
map 6045872-6061342 strain AX4, complete sequence.
Length = 313

Score = 224 bits (571), Expect = 4e-57
Identities = 111/117 (94%), Positives = 111/117 (94%)
Frame = +3

Query: 138 STSVSPNYLDLVPIDFMMKLLPSEYTFQSLFEVDYSKWDWSQLIPSKDFKFIEGVXPFTN 317
STSVSPNYLDLVPIDFMMKLLPSEYTFQSLFEVDYSKWDWSQLIPSKDFKFIEGV PFTN
Sbjct: 3 STSVSPNYLDLVPIDFMMKLLPSEYTFQSLFEVDYSKWDWSQLIPSKDFKFIEGVTPFTN 62

Query: 318 KNFIFMSIFLYLLTVLSIKVLFNVLNIKGWRLGMISGIHNXILXVXPFVMXAGLSYD 488
KNFIFMSIFLYLLTVLSIKVLFNVLNIKGWRLGMISGIHN IL V FVM AGLSYD
Sbjct: 63 KNFIFMSIFLYLLTVLSIKVLFNVLNIKGWRLGMISGIHNLILCVWSFVMCAGLSYD 119

Score = 211 bits (536), Expect = 4e-53
Identities = 100/114 (87%), Positives = 100/114 (87%)
Frame = +2

Query: 536 IAWTWLPGVAYASVGMFANTLVHVFMYYYYFRTSINPSVRIWWKSYLTSGQLFQFSMSFV 715
I WTWLPGVAYASVGMFANTLVHVFMYYYYFRTSINPSVRIWWKSYLTSGQLFQFSMSFV
Sbjct: 189 IVWTWLPGVAYASVGMFANTLVHVFMYYYYFRTSINPSVRIWWKSYLTSGQLFQFSMSFV 248

Query: 716 LAIPFLLQDISLNQTPGKFNHSCKGWGAFGFTMVXXXXXXXXXXXXYIQTYVNR 877
LAIPFLLQDISLNQT GKFNHSCKGWGAFGFTMV YIQTYVNR
Sbjct: 249 LAIPFLLQDISLNQTTGKFNHSCKGWGAFGFTMVNNLIFLILFINFYIQTYVNR 302

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,308,705,447
Number of extensions: 24200492
Number of successful extensions: 50160
Number of sequences better than 10.0: 168
Number of HSP's gapped: 49957
Number of HSP's successfully gapped: 171
Length of query: 339
Length of database: 1,051,180,864
Length adjustment: 129
Effective length of query: 210
Effective length of database: 633,664,753
Effective search space: 133069598130
Effective search space used: 133069598130
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.80 gvh: 0.40 alm: 0.26 top: 0.67 tms: 0.20 mit: 0.42 mip: 0.02
nuc: 0.00 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 1.00 m_ : 0.00

28.0 %: plasma membrane
28.0 %: endoplasmic reticulum
12.0 %: vacuolar
12.0 %: nuclear
8.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: Golgi
4.0 %: cytoplasmic

>> prediction for Contig-U16167-1 is pla

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 2
FC-IC (SUB) 0