| Contig-U16145-1 |
| Contig ID |
Contig-U16145-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1650 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
1400225 |
| End point |
1401767 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
11 |
| Number of EST |
17 |
| Link to clone list |
U16145 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 3.18 |
| Homology vs DNA |
Query= Contig-U16145-1 (Contig-U16145-1Q) /CSM_Contig/Contig-U16145-1Q.Seq.d
(1660 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AC115607) Dictyostelium discoideum chromosome 2 map 4559693... 1346 0.0 1
(C85040) Dictyostelium discoideum slug cDNA, clone SSC687. 1340 0.0 1
(BJ428335) Dictyostelium discoideum cDNA clone:ddv11f16, 3' ... 1289 0.0 2
(BJ377038) Dictyostelium discoideum cDNA clone:ddc22i10, 3' ... 1265 0.0 1
(C90340) Dictyostelium discoideum slug cDNA, clone SSI274. 1116 0.0 1
(AU037870) Dictyostelium discoideum slug cDNA, clone SSE389. 1100 0.0 1
(BJ345103) Dictyostelium discoideum cDNA clone:dda21j15, 3' ... 819 0.0 3
(BJ362758) Dictyostelium discoideum cDNA clone:ddc23i10, 5' ... 400 0.0 4
(BJ410863) Dictyostelium discoideum cDNA clone:ddv2k05, 5' e... 400 0.0 5
(BJ410188) Dictyostelium discoideum cDNA clone:ddv11f16, 5' ... 400 0.0 4
(BJ417420) Dictyostelium discoideum cDNA clone:ddv30f17, 5' ... 400 0.0 3
(BJ345544) Dictyostelium discoideum cDNA clone:dda28d03, 3' ... 188 5e-43 1
(BJ429033) Dictyostelium discoideum cDNA clone:ddv2k05, 3' e... 92 5e-23 2
(BJ328395) Dictyostelium discoideum cDNA clone:dda28d03, 5' ... 58 0.001 1
(BJ327748) Dictyostelium discoideum cDNA clone:dda21j15, 5' ... 58 0.001 1
(BJ388801) Dictyostelium discoideum cDNA clone:dds16e09, 5' ... 54 0.017 1
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 46 0.063 18
(FC698093) CAXX6507.fwd CAXX Lottia gigantea from male gonad... 50 0.27 1
(FC684035) CAXX17401.fwd CAXX Lottia gigantea from male gona... 50 0.27 1
(AF466304) Dictyostelium discoideum ABC transporter AbcB1 (a... 32 0.27 5
(AM607317) Entamoeba invadens IP1 GSS, clone inv076a09.q1k. 34 0.28 4
(AC111193) Homo sapiens BAC clone RP11-397D21 from 4, comple... 48 1.1 1
(ET487846) fcg2x.pk426.h4.f C. graminicola genomic sequence ... 48 1.1 1
(ET487328) fcg2x.pk423.g5.f C. graminicola genomic sequence ... 48 1.1 1
(ET463900) fcg2x.pk244.b12.f C. graminicola genomic sequence... 48 1.1 1
(ET446275) fcg2x.pk165.a5 C. graminicola genomic sequence Gl... 48 1.1 1
(AC125629) Homo sapiens 12 BAC RP11-359K6 (Roswell Park Canc... 42 1.1 4
(AM441941) Vitis vinifera contig VV78X036116.11, whole genom... 42 1.2 2
(AC178155) Strongylocentrotus purpuratus clone R3-3081D23, W... 34 1.5 9
(AC195103) Rhesus Macaque BAC CH250-335B10 () complete sequ... 36 2.1 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 38 2.4 8
(CU463977) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 3.2 3
(AC115750) Mus musculus chromosome 10, clone RP23-16F5, comp... 46 4.2 1
(AC157326) Dasypus novemcinctus, clone Dasypus novemcinctus-... 46 4.2 1
(BC064961) Homo sapiens tropomodulin 2 (neuronal), mRNA (cDN... 46 4.2 1
(BC036184) Homo sapiens tropomodulin 2 (neuronal), mRNA (cDN... 46 4.2 1
(AK054930) Homo sapiens cDNA FLJ30368 fis, clone BRACE2007799. 46 4.2 1
(AC090971) Homo sapiens chromosome 15 clone RP11-56B16 map 1... 46 4.2 1
(AC084854) Homo sapiens chromosome 15, clone CTD-3006F8, com... 46 4.2 1
(AC034277) Homo sapiens chromosome 3 clone RP11-335I3 map 3,... 46 4.2 1
(AC027736) Homo sapiens chromosome 15 clone RP11-297N1 map 1... 46 4.2 1
(CU407257) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 4.2 1
(AC222878) Bos taurus clone CH240-436G8, WORKING DRAFT SEQUE... 46 4.2 1
(AC222852) Bos taurus clone CH240-436I1, WORKING DRAFT SEQUE... 46 4.2 1
(AC222805) Bos taurus clone CH240-437N3, WORKING DRAFT SEQUE... 46 4.2 1
(AC222576) Bos taurus clone CH240-445G2, WORKING DRAFT SEQUE... 46 4.2 1
(AC173782) Bos taurus clone CH240-217M2, WORKING DRAFT SEQUE... 46 4.2 1
(AC022824) Homo sapiens chromosome 15 clone RP11-81I17 map 1... 46 4.2 1
(AC011639) Homo sapiens clone RP11-13H19, WORKING DRAFT SEQU... 46 4.2 1
(AC009679) Homo sapiens clone RP11-56B16, WORKING DRAFT SEQU... 46 4.2 1
(ED085409) AUAC-aao78d09.g1 Ascaris suum whole genome shotgu... 46 4.2 1
(ED063672) AUAC-aao26f06.b1 Ascaris suum whole genome shotgu... 46 4.2 1
(DU472588) 1098415686691 CHORI-243 Ovis aries genomic clone ... 46 4.2 1
(CR047520) Reverse strand read from insert in 3'HPRT inserti... 46 4.2 1
(CR043776) Reverse strand read from insert in 3'HPRT inserti... 46 4.2 1
(CR025304) Reverse strand read from insert in 3'HPRT inserti... 46 4.2 1
(EC312096) OVARYF089477N24 POSSUM_01-POSSUM-C-OVARY-2KB Tric... 46 4.2 1
(DA059713) Homo sapiens cDNA clone BRACE2007799, 5' end, mRN... 46 4.2 1
(AL603560) Homo sapiens mRNA; EST DKFZp686P167_r1 (from clo... 46 4.2 1
(AI623265) tu50c01.x1 NCI_CGAP_Pr28 Homo sapiens cDNA clone ... 46 4.2 1
(BX953848) Homo sapiens mRNA; EST DKFZp781O044_r1 (from clo... 46 4.2 1
(BP610546) Arabidopsis thaliana cDNA clone:RAFL16-11-O13, 3'... 46 4.2 1
(AA830383) oc64h02.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone ... 46 4.2 1
(AW978560) EST390669 MAGE resequences, MAGP Homo sapiens cDN... 46 4.2 1
(FF147370) Sm20A6 Cell cultures of Saussurea medusa Saussure... 46 4.2 1
(AA279816) zs92c06.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone ... 46 4.2 1
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 46 4.2 1
(EU492905) Francisella piscicida strain GM2212 16S ribosomal... 42 4.4 3
(DQ102703) Coreana raphaelis mitochondrion, complete genome. 40 4.8 3
(BX000438) Zebrafish DNA sequence from clone CH211-209M20 in... 38 5.4 6
(AP001950) Homo sapiens genomic DNA, chromosome 4q22-q24, cl... 40 5.5 6
(AZ670282) ENTMN84TF Entamoeba histolytica Sheared DNA Entam... 44 6.2 2
(AM632812) Entamoeba dispar GSS, clone dispar94g02.p1k. 44 6.2 2
(CC842604) NDL.108D15.T7 Notre Dame Liverpool Aedes aegypti ... 38 7.1 2
(AC190720) Zea mays chromosome 8 clone CH201-170A7; ZMMBBc01... 34 7.7 2
(AC206210) Zea mays chromosome 8 clone CH201-173H22; ZMMBBc0... 34 7.7 2
(AC204304) Zea mays chromosome 2 clone CH201-71I14; ZMMBBc00... 34 7.7 2
(AC217205) Oryza punctata clone OP__Ba0077L04, *** SEQUENCIN... 34 7.7 2
(AC155559) Zea mays strain B73 clone ZMMBBc0170A07, *** SEQU... 34 7.7 2
(AC206641) Zea mays chromosome 5 clone ZMMBBb-146H22; ZMMBBb... 34 7.9 2
(AM428899) Vitis vinifera contig VV79X000450.6, whole genome... 38 8.1 2
(AC159705) Medicago truncatula clone mth2-156l20, WORKING DR... 38 8.4 7
(CX054145) tai98d03.x2 Hydra EST UCI 5 ALP Hydra magnipapill... 34 9.9 3
>(AC115607) Dictyostelium discoideum chromosome 2 map 4559693-4624405
strain AX4, complete sequence.
Length = 64707
Score = 1346 bits (679), Expect = 0.0
Identities = 679/679 (100%)
Strand = Plus / Plus
Query: 815 agattatataatggtcatcatacaccaatggatgttattgcaggtttaattgtcgcaatt 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17319 agattatataatggtcatcatacaccaatggatgttattgcaggtttaattgtcgcaatt 17378
Query: 875 acatcaatattagcaacaacatatcaacttagatattttattgaaggaatggtattatct 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17379 acatcaatattagcaacaacatatcaacttagatattttattgaaggaatggtattatct 17438
Query: 935 gaaacctttttatttggaccaatgctttatattgcaattttatcagcaattttgtttttc 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17439 gaaacctttttatttggaccaatgctttatattgcaattttatcagcaattttgtttttc 17498
Query: 995 catccacaagcaaacactggaccaacaccagcatatccagagactggtttggtttgtggt 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17499 catccacaagcaaacactggaccaacaccagcatatccagagactggtttggtttgtggt 17558
Query: 1055 gcaagtttaggttctttaattagtttatggcttcatgctcaacatccatgtccattaatg 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17559 gcaagtttaggttctttaattagtttatggcttcatgctcaacatccatgtccattaatg 17618
Query: 1115 aatcaagaattattattattagaagctaattatgattcaatagtttcaacaattcattca 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17619 aatcaagaattattattattagaagctaattatgattcaatagtttcaacaattcattca 17678
Query: 1175 attccattattacttcatggtagtagaattttaattggtttggttttagttggtatagca 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17679 attccattattacttcatggtagtagaattttaattggtttggttttagttggtatagca 17738
Query: 1235 aaagttttctcaaagaaattctttttctttgcttatgatttggtaattagagcaaataca 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17739 aaagttttctcaaagaaattctttttctttgcttatgatttggtaattagagcaaataca 17798
Query: 1295 aataatgaacaatctcaaccaatcactacagtttcattcgatccaaataaaaagatcata 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17799 aataatgaacaatctcaaccaatcactacagtttcattcgatccaaataaaaagatcata 17858
Query: 1355 gtcactccaacaattgaagctttctcaaaattgtttgtttacacttgtgttagtttcact 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17859 gtcactccaacaattgaagctttctcaaaattgtttgtttacacttgtgttagtttcact 17918
Query: 1415 atcgtttcaatgccatacttattttattatttaaatattcaaacttctgctgatgtaaca 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17919 atcgtttcaatgccatacttattttattatttaaatattcaaacttctgctgatgtaaca 17978
Query: 1475 agatattattaggaaattt 1493
|||||||||||||||||||
Sbjct: 17979 agatattattaggaaattt 17997
Score = 400 bits (202), Expect(8) = 0.0
Identities = 202/202 (100%)
Strand = Plus / Plus
Query: 484 catattagcattaccaattagtacatggtgtgttgcaacacaattaggagttgaattatg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16901 catattagcattaccaattagtacatggtgtgttgcaacacaattaggagttgaattatg 16960
Query: 544 tgtggtgttagcacttacaattggtggtggaaatatactaaagaatacatttacattacc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16961 tgtggtgttagcacttacaattggtggtggaaatatactaaagaatacatttacattacc 17020
Query: 604 tcgtccaccaccaaatatagtttggaccaatacagcacatcaaaaagatcatggtttacc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17021 tcgtccaccaccaaatatagtttggaccaatacagcacatcaaaaagatcatggtttacc 17080
Query: 664 atcaactcatacagcatcagca 685
||||||||||||||||||||||
Sbjct: 17081 atcaactcatacagcatcagca 17102
Score = 250 bits (126), Expect(8) = 0.0
Identities = 126/126 (100%)
Strand = Plus / Plus
Query: 290 aatataggaagctatagtagtgataaagatggtgaatataaaaagtttagattttcaaaa 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16531 aatataggaagctatagtagtgataaagatggtgaatataaaaagtttagattttcaaaa 16590
Query: 350 acctcaattagaggttttctattaaaagaatatgaaagagaagtaccaattattgttaaa 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16591 acctcaattagaggttttctattaaaagaatatgaaagagaagtaccaattattgttaaa 16650
Query: 410 attcaa 415
||||||
Sbjct: 16651 attcaa 16656
Score = 58.0 bits (29), Expect(8) = 0.0
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 atttcaccccccattacaaacgacacaac 29
|||||||||||||||||||||||||||||
Sbjct: 16242 atttcaccccccattacaaacgacacaac 16270
Score = 50.1 bits (25), Expect(8) = 0.0
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 792 ggtcaacaagtgtaatgtttagcag 816
|||||||||||||||||||||||||
Sbjct: 17209 ggtcaacaagtgtaatgtttagcag 17233
Score = 36.2 bits (18), Expect(8) = 0.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 730 cccaacaattggtgaatc 747
||||||||||||||||||
Sbjct: 17147 cccaacaattggtgaatc 17164
Score = 28.2 bits (14), Expect(8) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 416 agttatagaaataa 429
||||||||||||||
Sbjct: 16833 agttatagaaataa 16846
Score = 28.2 bits (14), Expect(8) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 1122 aattattattatta 1135
||||||||||||||
Sbjct: 43005 aattattattatta 43018
Score = 26.3 bits (13), Expect(8) = 0.0
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 1436 ttttattatttaa 1448
|||||||||||||
Sbjct: 55053 ttttattatttaa 55065
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,522,653,824
Number of extensions: 99446764
Number of successful extensions: 11034052
Number of sequences better than 10.0: 84
Length of query: 1660
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1636
Effective length of database: 96,409,374,237
Effective search space: 157725736251732
Effective search space used: 157725736251732
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.20 |
| Homology vs Protein |
Query= Contig-U16145-1 (Contig-U16145-1Q) /CSM_Contig/Contig-U16145-1Q.Seq.d
(1660 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q55A00) RecName: Full=Probable sphingosine-1-phosphate phosphat... 747 0.0
(Q9P6N5) RecName: Full=Dihydrosphingosine 1-phosphate phosphatas... 93 3e-17
CR382131_869(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 86 3e-15
CU638743_428(CU638743|pid:none) Podospora anserina genomic DNA c... 84 2e-14
AM270325_48(AM270325|pid:none) Aspergillus niger contig An14c018... 83 3e-14
(P47013) RecName: Full=Dihydrosphingosine 1-phosphate phosphatas... 83 3e-14
CR380955_177(CR380955|pid:none) Candida glabrata strain CBS138 c... 81 1e-13
CR380957_352(CR380957|pid:none) Candida glabrata strain CBS138 c... 80 2e-13
BC106904_1(BC106904|pid:none) Homo sapiens sphingosine-1-phospha... 79 4e-13
AL669987_7(AL669987|pid:none) Neurospora crassa DNA linkage grou... 79 4e-13
FM992688_128(FM992688|pid:none) Candida dubliniensis CD36 chromo... 79 5e-13
BC171059_1(BC171059|pid:none) Xenopus tropicalis sphingosine-1-p... 78 1e-12
BC126582_1(BC126582|pid:none) Bos taurus sphingosine-1-phosphate... 75 9e-12
CP000924_1515(CP000924|pid:none) Thermoanaerobacter pseudethanol... 71 1e-10
(Q99P55) RecName: Full=Sphingosine-1-phosphate phosphatase 1; ... 69 4e-10
AB239190_1(AB239190|pid:none) Arabidopsis thaliana AtSPP1 mRNA f... 69 7e-10
AM502250_281(AM502250|pid:none) Leishmania infantum chromosome 32. 68 9e-10
CU928170_239(CU928170|pid:none) Kluyveromyces thermotolerans str... 67 3e-09
AE008691_697(AE008691|pid:none) Thermoanaerobacter tengcongensis... 67 3e-09
AM494969_252(AM494969|pid:none) Leishmania braziliensis chromoso... 66 3e-09
AF349315_1(AF349315|pid:none) Homo sapiens sphingosine-1-phospha... 65 1e-08
AF329638_1(AF329638|pid:none) Rattus norvegicus sphingosine-1-ph... 64 2e-08
EU969736_1(EU969736|pid:none) Zea mays clone 334829 phosphoric e... 63 4e-08
AE017346_289(AE017346|pid:none) Cryptococcus neoformans var. neo... 60 3e-07
BT038318_1(BT038318|pid:none) Zea mays full-length cDNA clone ZM... 60 3e-07
BT055172_1(BT055172|pid:none) Zea mays full-length cDNA clone ZM... 59 5e-07
CP000885_3641(CP000885|pid:none) Clostridium phytofermentans ISD... 56 4e-06
AK154116_1(AK154116|pid:none) Mus musculus NOD-derived CD11c +ve... 53 3e-05
CP000875_4948(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 51 1e-04
AE010300_2952(AE010300|pid:none) Leptospira interrogans serovar ... 47 0.002
AK227239_1(AK227239|pid:none) Arabidopsis thaliana mRNA for hypo... 47 0.003
CP000903_2082(CP000903|pid:none) Bacillus weihenstephanensis KBA... 46 0.005
CP000922_415(CP000922|pid:none) Anoxybacillus flavithermus WK1, ... 46 0.005
DQ517846_1(DQ517846|pid:none) Lissotriton vulgaris lantzi vouche... 45 0.006
AE001437_596(AE001437|pid:none) Clostridium acetobutylicum ATCC ... 45 0.006
CP001186_2136(CP001186|pid:none) Bacillus cereus G9842, complete... 45 0.008
CP000896_385(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 45 0.010
DQ517848_1(DQ517848|pid:none) Lissotriton vulgaris vulgaris vouc... 44 0.018
AE016877_2114(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 44 0.018
DQ517768_1(DQ517768|pid:none) Cynops cyanurus voucher MVZ219759 ... 44 0.018
CP001177_2194(CP001177|pid:none) Bacillus cereus AH187, complete... 44 0.023
EU880339_1(EU880339|pid:none) Lissotriton vulgaris mitochondrion... 44 0.023
AE017194_2324(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 44 0.023
DQ517847_1(DQ517847|pid:none) Lissotriton vulgaris lantzi vouche... 43 0.030
AE016879_2122(AE016879|pid:none) Bacillus anthracis str. Ames, c... 43 0.030
CP001407_2229(CP001407|pid:none) Bacillus cereus 03BB102, comple... 43 0.030
CP000485_1954(CP000485|pid:none) Bacillus thuringiensis str. Al ... 43 0.030
CP000851_3770(CP000851|pid:none) Shewanella pealeana ATCC 700345... 43 0.039
CP001114_379(CP001114|pid:none) Deinococcus deserti VCD115, comp... 43 0.039
Z82004_1(Z82004|pid:none) R.erythropolis DNA, 20S proteasome str... 43 0.039
S01073(S01073) hypothetical protein 2 (23S rRNA 3' region) - Des... 42 0.051
CP000505_1(CP000505|pid:none) Thermofilum pendens Hrk 5, complet... 42 0.051
DQ517809_1(DQ517809|pid:none) Paramesotriton sp. FMNH259125 tRNA... 42 0.067
AY585339_1(AY585339|pid:none) Discoglossus galganoi mitochondrio... 42 0.067
DQ517792_1(DQ517792|pid:none) Neurergus strauchii strauchii vouc... 42 0.067
AE001437_2363(AE001437|pid:none) Clostridium acetobutylicum ATCC... 42 0.087
AB218687_1(AB218687|pid:none) Gnathopogon elongatus mitochondria... 42 0.087
DQ517807_1(DQ517807|pid:none) Paramesotriton hongkongensis vouch... 42 0.087
DQ517805_1(DQ517805|pid:none) Paramesotriton hongkongensis vouch... 42 0.087
AB218688_1(AB218688|pid:none) Aphyocypris chinensis mitochondria... 42 0.087
CP000227_2142(CP000227|pid:none) Bacillus cereus Q1, complete ge... 41 0.11
AP006841_4536(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 41 0.11
EU880327_1(EU880327|pid:none) Paramesotriton deloustali mitochon... 41 0.11
AY458597_1(AY458597|pid:none) Paramesotriton hongkongensis mitoc... 41 0.11
DQ517844_1(DQ517844|pid:none) Ommatotriton ophyrticus ophryticus... 41 0.15
CP000358_253(CP000358|pid:none) Deinococcus geothermalis DSM 113... 41 0.15
CP000923_618(CP000923|pid:none) Thermoanaerobacter sp. X514, com... 41 0.15
CP000962_3402(CP000962|pid:none) Clostridium botulinum A3 str. L... 41 0.15
EU380997_1(EU380997|pid:none) Trimma caesiura NADH dehydrogenase... 40 0.19
BA000035_2713(BA000035|pid:none) Corynebacterium efficiens YS-31... 40 0.19
DQ517819_1(DQ517819|pid:none) Salamandra infraimmaculata voucher... 40 0.19
AY523786_1(AY523786|pid:none) Spea multiplicata 16S ribosomal RN... 40 0.25
AJ310141_1(AJ310141|pid:none) Heterodontus francisci complete mi... 40 0.25
CP000117_315(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 40 0.25
CP000880_1988(CP000880|pid:none) Salmonella enterica subsp. ariz... 40 0.33
AB239593_1(AB239593|pid:none) Alburnus alburnus mitochondrial DN... 40 0.33
EU880315_1(EU880315|pid:none) Echinotriton chinhaiensis mitochon... 40 0.33
AY523761_1(AY523761|pid:none) Discoglossus pictus 16S ribosomal ... 40 0.33
CP000609_1758(CP000609|pid:none) Methanococcus maripaludis C5, c... 40 0.33
CP001111_1525(CP001111|pid:none) Stenotrophomonas maltophilia R5... 39 0.56
CP000141_1798(CP000141|pid:none) Carboxydothermus hydrogenoforma... 39 0.56
CP000975_1452(CP000975|pid:none) Methylacidiphilum infernorum V4... 39 0.56
AF391425_1(AF391425|pid:none) Barbulifer ceuthoecus NADH dehydro... 39 0.56
CP001348_1519(CP001348|pid:none) Clostridium cellulolyticum H10,... 39 0.74
AM849034_1297(AM849034|pid:none) Clavibacter michiganensis subsp... 39 0.74
CP000117_4998(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 39 0.74
CP001039_139(CP001039|pid:none) Nostoc punctiforme PCC 73102 pla... 38 0.96
CP001227_466(CP001227|pid:none) Rickettsia peacockii str. Rustic... 38 0.96
AP002925_1(AP002925|pid:none) Trachipterus trachipterus mitochon... 38 0.96
DQ023143_1(DQ023143|pid:none) Scleropages formosus mitochondrion... 38 1.3
CU207366_1209(CU207366|pid:none) Gramella forsetii KT0803 comple... 38 1.3
AG1640(AG1640) hypothetical protein homolog lin1664 [imported] -... 38 1.3
AE011190_123(AE011190|pid:none) Bacillus anthracis str. A2012 pl... 38 1.3
CU207366_508(CU207366|pid:none) Gramella forsetii KT0803 complet... 37 1.6
FJ657485_1(FJ657485|pid:none) Saxicola torquata axillaris isolat... 37 1.6
CP001230_440(CP001230|pid:none) Persephonella marina EX-H1, comp... 37 1.6
FJ657486_1(FJ657486|pid:none) Saxicola rubicola isolate AV7 NADH... 37 1.6
AM711867_1938(AM711867|pid:none) Clavibacter michiganensis subsp... 37 1.6
CP000024_262(CP000024|pid:none) Streptococcus thermophilus CNRZ1... 37 1.6
(Q57819) RecName: Full=Uncharacterized protein MJ0374; &F64346(... 37 1.6
AY456250_1(AY456250|pid:none) Gegeneophis ramaswamii mitochondri... 37 2.1
AP008934_1322(AP008934|pid:none) Staphylococcus saprophyticus su... 37 2.1
AY789013_1(AY789013|pid:none) Xenopus tropicalis mitochondrion, ... 37 2.1
FJ489332_1(FJ489332|pid:none) Agalychnis callidryas isolate uvi9... 37 2.1
FJ489306_1(FJ489306|pid:none) Agalychnis callidryas isolate pav8... 37 2.1
AB042952_1(AB042952|pid:none) Amia calva mitochondrial DNA, comp... 37 2.1
BA000032_129(BA000032|pid:none) Vibrio parahaemolyticus RIMD 221... 37 2.1
CP000769_420(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, co... 37 2.8
CP000822_2211(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 37 2.8
CP000023_263(CP000023|pid:none) Streptococcus thermophilus LMG 1... 37 2.8
AJ310140_1(AJ310140|pid:none) Chimaera monstrosa complete mitoch... 37 2.8
AY659992_1(AY659992|pid:none) Ambystoma tigrinum tigrinum mitoch... 37 2.8
AY523769_1(AY523769|pid:none) Brachytarsophrys feae 16S ribosoma... 37 2.8
CP000472_439(CP000472|pid:none) Shewanella piezotolerans WP3, co... 37 2.8
AE017355_2161(AE017355|pid:none) Bacillus thuringiensis serovar ... 37 2.8
AF449345_1(AF449345|pid:none) Floridichthys carpio isolate F.car... 36 3.7
AP006744_1(AP006744|pid:none) Canthigaster rivulata mitochondria... 36 3.7
AY605473_1(AY605473|pid:none) Rhineura floridana voucher MVZ 233... 36 3.7
AP002928_1(AP002928|pid:none) Percopsis transmontana mitochondri... 36 3.7
FJ472837_1(FJ472837|pid:none) Epinephelus lanceolatus mitochondr... 36 3.7
AF391453_1(AF391453|pid:none) Acanthogobius flavimanus NADH dehy... 36 4.8
L25421_1(L25421|pid:none) Treponema denticola phosphatase gene, ... 36 4.8
AE017226_2165(AE017226|pid:none) Treponema denticola ATCC 35405,... 36 4.8
CP001131_4077(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 36 4.8
CP001107_1505(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 36 4.8
CP000359_1363(CP000359|pid:none) Deinococcus geothermalis DSM 11... 36 4.8
CP001026_24(CP001026|pid:none) Burkholderia ambifaria MC40-6 chr... 36 4.8
CP000903_4475(CP000903|pid:none) Bacillus weihenstephanensis KBA... 36 4.8
CP000040_369(CP000040|pid:none) Bacillus cereus E33L plasmid pE3... 36 4.8
CP000745_872(CP000745|pid:none) Methanococcus maripaludis C7, co... 36 4.8
AC1698(AC1698) hypothetical protein homolog lin2125 [imported] -... 36 4.8
AP009526_1(AP009526|pid:none) Takifugu niphobles mitochondrial D... 36 4.8
AB034826_1(AB034826|pid:none) Polymixia japonica mitochondrial D... 36 4.8
DQ517826_1(DQ517826|pid:none) Taricha torosa voucher MVZ230652 t... 36 4.8
AP009525_1(AP009525|pid:none) Takifugu chrysops mitochondrial DN... 35 6.2
CP000939_3420(CP000939|pid:none) Clostridium botulinum B1 str. O... 35 6.2
EU166921_1(EU166921|pid:none) Aeronautes saxatalis tRNA-Leu gene... 35 6.2
AY523778_1(AY523778|pid:none) Xenopus tropicalis 16S ribosomal R... 35 6.2
(Q5UQ40) RecName: Full=Probable bifunctional E2/E3 enzyme R795; ... 35 6.2
CP000441_1759(CP000441|pid:none) Burkholderia ambifaria AMMD chr... 35 6.2
AP009530_1(AP009530|pid:none) Takifugu stictonotus mitochondrial... 35 6.2
CP001407_2575(CP001407|pid:none) Bacillus cereus 03BB102, comple... 35 6.2
CP000867_1028(CP000867|pid:none) Methanococcus maripaludis C6, c... 35 6.2
CP000961_4708(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 35 6.2
AP009533_1(AP009533|pid:none) Takifugu xanthopterus mitochondria... 35 6.2
CP001339_2703(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ... 35 6.2
FJ542151_1(FJ542151|pid:none) Dendropsophus ebraccatus isolate c... 35 6.2
AP009540_1(AP009540|pid:none) Takifugu exascurus mitochondrial D... 35 6.2
AP009193_7(AP009193|pid:none) Diomedea chrysostoma mitochondrial... 35 6.2
AP010904_2749(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 35 6.2
CP000139_3192(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 35 8.1
AE017355_4446(AE017355|pid:none) Bacillus thuringiensis serovar ... 35 8.1
AF362763_7(AF362763|pid:none) Eudyptula minor mitochondrion, com... 35 8.1
CP001176_2529(CP001176|pid:none) Bacillus cereus B4264, complete... 35 8.1
CR382122_235(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 35 8.1
CP000029_969(CP000029|pid:none) Staphylococcus epidermidis RP62A... 35 8.1
CP000159_1494(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 35 8.1
AP004356_1(AP004356|pid:none) Hiodon alosoides mitochondrial DNA... 35 8.1
(O21403) RecName: Full=Cytochrome c oxidase subunit 3; ... 35 8.1
AY525783_1(AY525783|pid:none) Raja porosa mitochondrion, complet... 35 8.1
CP000152_3158(CP000152|pid:none) Burkholderia sp. 383 chromosome... 35 8.1
AF069429_7(AF069429|pid:none) Struthio camelus tRNA-Phe gene, pa... 35 8.1
FJ542194_1(FJ542194|pid:none) Dendropsophus ebraccatus isolate u... 35 8.1
CP000108_1998(CP000108|pid:none) Chlorobium chlorochromatii CaD3... 35 8.1
CP001157_811(CP001157|pid:none) Azotobacter vinelandii DJ, compl... 35 8.1
CP000243_1517(CP000243|pid:none) Escherichia coli UTI89, complet... 35 8.1
AF391424_1(AF391424|pid:none) Risor ruber isolate RISRUBII NADH ... 35 8.1
AE015929_1109(AE015929|pid:none) Staphylococcus epidermidis ATCC... 35 8.1
FJ489329_1(FJ489329|pid:none) Agalychnis callidryas isolate uvi8... 35 8.1
>(Q55A00) RecName: Full=Probable sphingosine-1-phosphate phosphatase;
Short=SPPase; EC=3.1.3.-;
Length = 406
Score = 747 bits (1929), Expect = 0.0
Identities = 379/406 (93%), Positives = 379/406 (93%)
Frame = +2
Query: 266 MEKIKKQNNIGSYSSDKDGEYKKFRFSKTSIRGFLLKEYEREVPIIVKIQSYRNKFLDFY 445
MEKIKKQNNIGSYSSDKDGEYKKFRFSKTSIRGFLLKEYEREVPIIVKIQSYRNKFLDFY
Sbjct: 1 MEKIKKQNNIGSYSSDKDGEYKKFRFSKTSIRGFLLKEYEREVPIIVKIQSYRNKFLDFY 60
Query: 446 FKMASILGEEVFFILALPISTWCVATQLGVELCVVLALTIGGGNILKNTFTLPRPPPNIV 625
FKMASILGEEVFFILALPISTWCVATQLGVELCVVLALTIGGGNILKNTFTLPRPPPNIV
Sbjct: 61 FKMASILGEEVFFILALPISTWCVATQLGVELCVVLALTIGGGNILKNTFTLPRPPPNIV 120
Query: 626 WTNTAHQKDHGLPSTHTASAXXXXXXXXXXXXXXXXXIGESFNISLLSMFFIVLFWSTSV 805
WTNTAHQKDHGLPSTHTASA IGESFNISLLSMFFIVLFWSTSV
Sbjct: 121 WTNTAHQKDHGLPSTHTASAFGLTFYFLIYTYFLFPTIGESFNISLLSMFFIVLFWSTSV 180
Query: 806 MFSRLYNGHHTPMDVIAGLIVAITSILATTYQLRYFIEGMVLSETFLFGPMLYIAILSAI 985
MFSRLYNGHHTPMDVIAGLIVAITSILATTYQLRYFIEGMVLSETFLFGPMLYIAILSAI
Sbjct: 181 MFSRLYNGHHTPMDVIAGLIVAITSILATTYQLRYFIEGMVLSETFLFGPMLYIAILSAI 240
Query: 986 LFFHPQANTGPTPAYPETGLVCGASLGSLISLWLHAQHPCPLMNQELLLLEANYDSIVST 1165
LFFHPQANTGPTPAYPETGLVCGASLGSLISLWLHAQHPCPLMNQELLLLEANYDSIVST
Sbjct: 241 LFFHPQANTGPTPAYPETGLVCGASLGSLISLWLHAQHPCPLMNQELLLLEANYDSIVST 300
Query: 1166 IHSIPLLLHGSRILIGLVLVGIAXXXXXXXXXXAYDLVIRANTNNEQSQPITTVSFDPNK 1345
IHSIPLLLHGSRILIGLVLVGIA AYDLVIRANTNNEQSQPITTVSFDPNK
Sbjct: 301 IHSIPLLLHGSRILIGLVLVGIAKVFSKKFFFFAYDLVIRANTNNEQSQPITTVSFDPNK 360
Query: 1346 KIIVTPTIEAFSKLFVYTCVSFTIVSMPYLFYYLNIQTSADVTRYY 1483
KIIVTPTIEAFSKLFVYTCVSFTIVSMPYLFYYLNIQTSADVTRYY
Sbjct: 361 KIIVTPTIEAFSKLFVYTCVSFTIVSMPYLFYYLNIQTSADVTRYY 406
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,973,087,559
Number of extensions: 34923267
Number of successful extensions: 89307
Number of sequences better than 10.0: 169
Number of HSP's gapped: 89217
Number of HSP's successfully gapped: 170
Length of query: 553
Length of database: 1,051,180,864
Length adjustment: 134
Effective length of query: 419
Effective length of database: 617,481,958
Effective search space: 258724940402
Effective search space used: 258724940402
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
3 |
| AH (FL, L) |
0 |
| AF (FL, S) |
2 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
3 |
| SH (FL, L) |
0 |
| SF (FL, S) |
1 |
| CH (FL, L) |
2 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |