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Dicty_cDB
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
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Contig-U16089-1
Contig ID Contig-U16089-1
Contig update 2004. 6.11
Contig sequence 
>Contig-U16089-1 (Contig-U16089-1Q) /CSM_Contig/Contig-U16089-1Q.Seq.d
AAAATCTAATTAACAGCTTTTTTTTTAACACCTTTTGTTATATAATAAAT
ATTCATTGTATATAATAACTTTTTTTTGTTTATTTAATAACAATTTCAAA
AAAAAAAAAAAAAAAAAAAGAAAACATTTTTATTTTTAAAGAGCGAAGCA
TTAAAAAAAAAAATATAATAGAAAATATCATTTTTTTTTTTTTTTACACA
TTCAGTCATAATTTTAGTTATATAACATAATACATATATATCAGTATTTC
AATATATATATATAAAGACTTTAATAGAAATAAAAATTTTAGTTTTTTCA
AAACATCAACACACCTTTTCAAAAGAACAACAACAACAATAACAGTATTT
TAAATATAGTTAAAAGAAAAATGTCAACAACAAGAGCAATTCCAGTATCT
TTAAAGGATAGATCAGATATCGATTTTTCAACATCATTAGGTGGCACTTT
ATATGGTACTACTCCAGGTGGCACAAAGATTGTTTATGATCGTAATGCCT
TATTACAATATCGTAATTCACCACTCTCAAAAACTCCACCACCACAATTA
GCTCATATTACAAATACTGAATTAAACAAGAAAGTTGAAAAATCCACTAC
AACTCCAACTACTACAACTCCACCAACTACCACCGCTAAACCAAAACCAA
CTAACGACGATGATATTTTCACAATGGAATAAGGGGAGAAAGAAAGAAAG
AGAAAGTAGTATTGTATAAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAATTAATTA----------TAATAATAATAATAATAA
TAATAATAATATAAAATGAAAATAATAATAACTTATTTGGTATATCTTTT
AAAAGATCCAAAAAAGAAAAAAATATATATTTATTTGAAATAAATTTGTA
TAAATAGAATA
Gap gap included
Contig length 901
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 1031261
End point 1032082
Strand (PLUS/MINUS) PLUS
Number of clones 12
Number of EST 13
Link to clone list U16089
List of clone(s) 

est1=VHE843F,1,162
est2=VSI448F,8,107
est3=SSA681E,14,727
est4=FC-AK24E,16,724
est5=SSB201Z,165,725
est6=SLC753F,217,606
est7=SSM607Z,253,725
est8=SSL115Z,255,730
est9=SSM665Z,255,727
est10=VSC738Z,277,725
est11=SSI340F,380,772
est12=VSJ859F,521,733
est13=SLC753Z,773,901
Translated Amino Acid sequence 
ki*ltaffltpfvi**ifivynnfflfi**qfqkkkkkkkktflflksealkkki**kis
fffffthsviilvi*hntyisvfqyiyiktlieikilvfskhqhtfskeqqqq*qyfkys
*kknvnnksnssifkg*iryrffniirwhfiwyysrwhkdcl*s*clitis*fttlknst
ttissyyky*ikqes*kihynsnyynstnyhr*tktn*rr*YFHNGIRGERKKEKVVLYK
FKKKKKKKKKKKKKKLI---

---NNNNNNNNNIK*k***liwyif*kiqkrkkyifi*nkfv*ie
Translated Amino Acid sequence (All Frames) 
Frame A:
ki*ltaffltpfvi**ifivynnfflfi**qfqkkkkkkkktflflksealkkki**kis
fffffthsviilvi*hntyisvfqyiyiktlieikilvfskhqhtfskeqqqq*qyfkys
*kknvnnksnssifkg*iryrffniirwhfiwyysrwhkdcl*s*clitis*fttlknst
ttissyyky*ikqes*kihynsnyynstnyhr*tktn*rr*YFHNGIRGERKKEKVVLYK
FKKKKKKKKKKKKKKLI---

---*********ykmkiiitylvyllkdpkkkkiyiylk*icinri

Frame B:
ksn*qlff*hlllynkyslyiitffclfnnnfkkkkkkkrkhfyf*rakh*kkkynrkyh
fffflhiqs*f*lyniihiyqyfniyi*rl**k*kf*ffqnintpfqknnnnnnsilniv
krkmsttraipvslkdrsdidfstslggtlygttpggtkivydrnallqyrnsplsktpp
pqlahitntelnkkvekstttpttttpptttakpkptndddiftme*gekerkrk*ycin
lkkkkkkkkkkkkkn*l---

---NNNNNNNNNIK*k***liwyif*kiqkrkkyifi*nkfv*ie

Frame C:
nlinsfffntfcyiinihci**lffvylitiskkkkkkkenififkersikkkniienii
ffffytfshnfsyit*yiyisisiyiykdfnrnknfsffktsthlfkrttttitvf*i*l
kekcqqqeqfqyl*ridqisifqhh*valymvllqvaqrlfmivmpyynivihhsqklhh
hn*lilqiln*trklknplqlqllqlhqlpplnqnqlttmifsqwnkgrkkeressiv*i
*kkkkkkkkkkkkkin---

---iiiiiiiii*nennnnlfgisfkrskkekniylfeinlyk*n
own update 2004. 6.23
Homology vs CSM-cDNA 
Query= Contig-U16089-1 (Contig-U16089-1Q)
/CSM_Contig/Contig-U16089-1Q.Seq.d
         (911 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U16089-1 (Contig-U16089-1Q) /CSM_Contig/Conti...   910  0.0
Contig-U10335-1 (Contig-U10335-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U16477-1 (Contig-U16477-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U12163-1 (Contig-U12163-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U11477-1 (Contig-U11477-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U10975-1 (Contig-U10975-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U02001-1 (Contig-U02001-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U01842-1 (Contig-U01842-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U16297-1 (Contig-U16297-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U15666-1 (Contig-U15666-1Q) /CSM_Contig/Conti...    40  0.006

>Contig-U16089-1 (Contig-U16089-1Q) /CSM_Contig/Contig-U16089-1Q.Seq.d
          Length = 911

 Score =  910 bits (459), Expect = 0.0
 Identities = 459/459 (100%)
 Strand = Plus / Plus

                                                                       
Query: 265 aagactttaatagaaataaaaattttagttttttcaaaacatcaacacaccttttcaaaa 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagactttaatagaaataaaaattttagttttttcaaaacatcaacacaccttttcaaaa 324

                                                                       
Query: 325 gaacaacaacaacaataacagtattttaaatatagttaaaagaaaaatgtcaacaacaag 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaacaacaacaacaataacagtattttaaatatagttaaaagaaaaatgtcaacaacaag 384

                                                                       
Query: 385 agcaattccagtatctttaaaggatagatcagatatcgatttttcaacatcattaggtgg 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agcaattccagtatctttaaaggatagatcagatatcgatttttcaacatcattaggtgg 444

                                                                       
Query: 445 cactttatatggtactactccaggtggcacaaagattgtttatgatcgtaatgccttatt 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cactttatatggtactactccaggtggcacaaagattgtttatgatcgtaatgccttatt 504

                                                                       
Query: 505 acaatatcgtaattcaccactctcaaaaactccaccaccacaattagctcatattacaaa 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acaatatcgtaattcaccactctcaaaaactccaccaccacaattagctcatattacaaa 564

                                                                       
Query: 565 tactgaattaaacaagaaagttgaaaaatccactacaactccaactactacaactccacc 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tactgaattaaacaagaaagttgaaaaatccactacaactccaactactacaactccacc 624

                                                                       
Query: 625 aactaccaccgctaaaccaaaaccaactaacgacgatgatattttcacaatggaataagg 684
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aactaccaccgctaaaccaaaaccaactaacgacgatgatattttcacaatggaataagg 684

                                                  
Query: 685 ggagaaagaaagaaagagaaagtagtattgtataaattt 723
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggagaaagaaagaaagagaaagtagtattgtataaattt 723


 Score = 93.7 bits (47), Expect = 5e-19
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                      
Query: 27 aacaccttttgttatataataaatattcattgtatataataacnnnnnnnngtttattta 86
          |||||||||||||||||||||||||||||||||||||||||||        |||||||||
Sbjct: 27 aacaccttttgttatataataaatattcattgtatataataacttttttttgtttattta 86

                     
Query: 87 ataacaatttc 97
          |||||||||||
Sbjct: 87 ataacaatttc 97


 Score = 75.8 bits (38), Expect = 1e-13
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                 
Query: 874 tatatatttatttgaaataaatttgtataaatagaata 911
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 874 tatatatttatttgaaataaatttgtataaatagaata 911


 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                            
Query: 120 gaaaacatttttatttttaaagagcgaagcatt 152
           |||||||||||||||||||||||||||||||||
Sbjct: 120 gaaaacatttttatttttaaagagcgaagcatt 152


 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 832 cttatttggtatatcttttaaaagatcc 859
           ||||||||||||||||||||||||||||
Sbjct: 832 cttatttggtatatcttttaaaagatcc 859


 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 196 acacattcagtcataattttagt 218
           |||||||||||||||||||||||
Sbjct: 196 acacattcagtcataattttagt 218


>Contig-U10335-1 (Contig-U10335-1Q) /CSM_Contig/Contig-U10335-1Q.Seq.d
          Length = 1353

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 327 acaacaacaacaataacagtattttaaata 356
           |||||||||||||||||| ||||| |||||
Sbjct: 688 acaacaacaacaataacaatatttcaaata 717


>Contig-U16477-1 (Contig-U16477-1Q) /CSM_Contig/Contig-U16477-1Q.Seq.d
          Length = 2468

 Score = 42.1 bits (21), Expect = 0.001
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 318 ttcaaaagaacaacaacaacaataa 342
           ||||||| |||||||||||||||||
Sbjct: 633 ttcaaaacaacaacaacaacaataa 657


 Score = 38.2 bits (19), Expect = 0.023
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 326 aacaacaacaacaataacagtat 348
           ||||||||||||| |||||||||
Sbjct: 713 aacaacaacaacattaacagtat 735


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 36,090
Number of Sequences: 8402
Number of extensions: 36090
Number of successful extensions: 11246
Number of sequences better than 10.0: 1131
length of query: 911
length of database: 8,075,542
effective HSP length: 16
effective length of query: 895
effective length of database: 7,941,110
effective search space: 7107293450
effective search space used: 7107293450
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 3.12
Homology vs DNA 
Query= Contig-U16089-1 (Contig-U16089-1Q) /CSM_Contig/Contig-U16089-1Q.Seq.d
         (911 letters)

Database: ddbj_B
           98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AB038152) Dictyostelium discoideum Dd4E-BP mRNA for 4E-bind...   494   0.0    7
(C22782) Dictyostelium discoideum gamete cDNA, clone FC-AK24.     448   0.0    9
(AU037043) Dictyostelium discoideum slug cDNA, clone SSB201.      494   e-177  4
(C89692) Dictyostelium discoideum slug cDNA, clone SSA681.        480   e-171  4
(C93356) Dictyostelium discoideum slug cDNA, clone SSM665.        494   e-171  3
(C93308) Dictyostelium discoideum slug cDNA, clone SSM607.        494   e-171  3
(C94507) Dictyostelium discoideum slug cDNA, clone SSL115.        494   e-170  3
(AU262761) Dictyostelium discoideum vegetative cDNA clone:VS...   494   e-168  2
(AU270587) Dictyostelium discoideum vegetative cDNA clone:VS...   145   2e-63  2
(BJ420750) Dictyostelium discoideum cDNA clone:ddv40f12, 5' ...    86   2e-23  3
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    76   2e-20  2
(AU034366) Dictyostelium discoideum slug cDNA, clone SLC753.       76   3e-20  2
(AU268712) Dictyostelium discoideum vegetative cDNA clone:VS...    86   1e-18  2
(AU263920) Dictyostelium discoideum vegetative cDNA clone:VS...    76   1e-15  2
(AU268726) Dictyostelium discoideum vegetative cDNA clone:VS...    52   1e-08  2
(AC193916) Pan troglodytes BAC clone CH251-600P4 from chromo...    46   0.002  2
(AC214814) Pan troglodytes BAC clone CH251-513G15 from chrom...    46   0.002  2
(AL450468) Human DNA sequence from clone RP11-195M16 on chro...    46   0.002  2
(AX345402) Sequence 473 from Patent WO0200928.                     46   0.002  2
(CU463787) Drosophila DNA sequence from clone XX-CHORI221_29...    54   0.009  1
(CP000331) Drosophila melanogaster genomic scaffold 21100002...    54   0.009  1
(CT971576) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   0.027  6
(AC173417) Bos taurus clone CH240-278B13, WORKING DRAFT SEQU...    40   0.035  5
(AC124546) Mus musculus BAC clone RP23-273G17 from chromosom...    50   0.15   1
(AG140815) Pan troglodytes DNA, clone: PTB-155L12.F.               50   0.15   1
(AL772290) Mouse DNA sequence from clone RP23-66O4 on chromo...    44   0.19   3
(AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3...    38   0.30   8
(AC200056) Zea mays chromosome 10 clone CH201-326J9; ZMMBBc0...    40   0.31   2
(AB152452) Homo sapiens DNA, STS on chromosome 21, D21S0324i...    40   0.33   2
(AC134466) Mus musculus BAC clone RP23-463E4 from chromosome...    40   0.44   3
(AC079794) Homo sapiens BAC clone RP11-588F18 from 4, comple...    36   0.57   3
(AC007777) Homo sapiens chromosome 18 clone RP11-493O9 map 1...    44   0.57   5
(AL928611) Mouse DNA sequence from clone RP23-263O5 on chrom...    48   0.58   1
(EU153401) Felis catus FLA extended class II, class II, clas...    48   0.58   1
(AC117007) Rattus norvegicus clone CH230-358N16, WORKING DRA...    48   0.58   1
(AC100326) Mus musculus clone RP23-125L10, LOW-PASS SEQUENCE...    48   0.58   1
(CU928332) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.58   1
(AC178949) Strongylocentrotus purpuratus clone R3-3121G11, W...    48   0.58   1
(AC162935) Mus musculus chromosome 8 clone RP23-125L10, WORK...    48   0.58   1
(BH422789) BOHEA48TR BOHE Brassica oleracea genomic clone BO...    48   0.58   1
(AZ555086) RPCI-23-177L24.TJ RPCI-23 Mus musculus genomic cl...    48   0.58   1
(AZ533845) ENTBI03TF Entamoeba histolytica Sheared DNA Entam...    48   0.58   1
(AZ020970) RPCI-23-335L18.TJ RPCI-23 Mus musculus genomic cl...    48   0.58   1
(EI996413) SB_BBc110-B20.F SB_BBc Sorghum bicolor genomic 5'...    48   0.58   1
(AG624025) Macaca fuscata fuscata DNA, clone: MSB2-019I20_F,...    48   0.58   1
(CE143179) tigr-gss-dog-17000371261159 Dog Library Canis lup...    48   0.58   1
(AG393591) Mus musculus molossinus DNA, clone:MSMg01-212B24....    48   0.58   1
(AG303918) Mus musculus molossinus DNA, clone:MSMg01-083O19....    48   0.58   1
(DT929971) S29-21536 Hematopoietic stem cells Mus musculus c...    48   0.58   1
(GD772491) 454GmaGlobSeed515140 Soybean Seeds Containing Glo...    48   0.58   1
(BB118540) Mus musculus adult male urinary bladder cDNA, RIK...    48   0.58   1
(AC092940) Homo sapiens 3 BAC RP11-128L14 (Roswell Park Canc...    42   0.64   5
(AC164162) Mus musculus BAC clone RP23-253E17 from chromosom...    46   0.74   4
(CZ529102) SRAA-aac59c07.b1 Strongyloides ratti whole genome...    34   0.89   3
(AL356137) Human DNA sequence from clone RP11-515I12 on chro...    42   0.92   3
(CT027693) Mouse DNA sequence from clone RP24-120H1 on chrom...    46   0.95   5
(CR354432) Zebrafish DNA sequence from clone CH211-66E2 in l...    40   0.96   4
(CR381603) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    40   0.96   4
(BV313034) S236P6127FC10.T0 AlaskanMalamute Canis familiaris...    42   0.97   2
(CE779384) tigr-gss-dog-17000317050018 Dog Library Canis lup...    40   1.1    2
(AC202814) Macaca mulatta clone CH250-341P17, WORKING DRAFT ...    40   1.1    3
(AC125120) Mus musculus BAC clone RP24-267M16 from chromosom...    32   1.2    2
(AC126798) Mus musculus BAC clone RP24-229N7 from chromosome...    32   1.2    2
(AC181616) Bos taurus clone CH240-330A19, WORKING DRAFT SEQU...    42   1.2    3
(AC100638) Mus musculus clone RP23-162B9, LOW-PASS SEQUENCE ...    32   1.3    2
(AC133096) Mus musculus BAC clone RP23-271C13 from chromosom...    40   1.4    2
(CE785882) tigr-gss-dog-17000330846614 Dog Library Canis lup...    40   1.4    2
(AC015503) Homo sapiens clone RP11-21H2, WORKING DRAFT SEQUE...    42   1.6    4
(AG389836) Mus musculus molossinus DNA, clone:MSMg01-206B14....    36   1.6    2
(CU862009) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   1.8    6
(CZ961432) 307962 Tomato EcoRI BAC Library Solanum lycopersi...    38   2.1    2
(AK042597) Mus musculus 7 days neonate cerebellum cDNA, RIKE...    40   2.1    2
(CR450717) Zebrafish DNA sequence from clone CH211-33E4 in l...    46   2.3    1
(BX927169) Zebrafish DNA sequence from clone DKEY-115P24 in ...    46   2.3    1
(BX004818) Zebrafish DNA sequence from clone DKEY-64O12.           46   2.3    1
(CT485609) Mouse DNA sequence from clone RP23-74C21 on chrom...    46   2.3    1
(AL772160) Mouse DNA sequence from clone RP23-85H5 on chromo...    46   2.3    1
(AL603889) Mouse DNA sequence from clone RP23-407M20 on chro...    46   2.3    1
(AC165972) Mus musculus BAC clone RP23-87D12 from chromosome...    46   2.3    1
(AC164983) Mus musculus BAC clone RP23-16J24 from chromosome...    46   2.3    1
(AC161268) Mus musculus BAC clone RP23-198F11 from chromosom...    46   2.3    1
(AC160987) Mus musculus BAC clone RP23-248O24 from chromosom...    46   2.3    1
(AC158383) Mus musculus BAC clone RP23-135O16 from chromosom...    46   2.3    1
(AC157021) Mus musculus 10 BAC RP24-328K10 (Roswell Park Can...    46   2.3    1
(AC155270) Mus musculus BAC clone RP23-195H19 from chromosom...    46   2.3    1
(AC132404) Mus musculus BAC clone RP23-328O21 from chromosom...    46   2.3    1
(AC125129) Mus musculus BAC clone RP24-308H8 from chromosome...    46   2.3    1
(AC124632) Mus musculus chromosome 19, clone RP23-445I14, co...    46   2.3    1
(AC121917) Mus musculus BAC clone RP24-194F23 from 5, comple...    46   2.3    1
(AC121845) Mus musculus BAC clone RP24-82B23 from 5, complet...    46   2.3    1
(AC121091) Mus musculus chromosome 1, clone RP24-191N24, com...    46   2.3    1
(AC118541) Mus musculus strain 129/SvJ chromosome 17 clone m...    46   2.3    1
(AC099636) Mus musculus chromosome 19, clone RP24-149H13, co...    46   2.3    1
(AC202728) Rhesus Macaque  BAC CH250-345C1 () complete seque...    46   2.3    1
(EU967021) Zea mays clone 298899 unknown mRNA.                     46   2.3    1
(AM488492) Vitis vinifera, whole genome shotgun sequence, co...    46   2.3    1
(DJ334088) THERAPEUTIC GPCR TARGETS IN CANCER.                     46   2.3    1
(CS788976) Sequence 232 from Patent WO2005031001.                  46   2.3    1
(CQ868601) Sequence 13 from Patent WO2004074321.                   46   2.3    1
(AX345369) Sequence 440 from Patent WO0200928.                     46   2.3    1
(AR554150) Sequence 9281 from patent US 6747137.                   46   2.3    1
(CU463126) Pig DNA sequence from clone CH242-460K5 on chromo...    46   2.3    1
(AL133299) Human chromosome 14 DNA sequence BAC R-62H20 of l...    46   2.3    1
(AC206480) Homo sapiens FOSMID clone ABC9-44034900E1 from ch...    46   2.3    1
(AC096669) Homo sapiens BAC clone RP11-380G16 from 2, comple...    46   2.3    1
(AC090573) Homo sapiens chromosome 8, clone RP11-440B23, com...    46   2.3    1
(AC010980) Homo sapiens BAC clone RP11-384O8 from 2, complet...    46   2.3    1
(AC144675) Rattus norvegicus clone CH230-103J11, *** SEQUENC...    46   2.3    1
(AC141207) Rattus norvegicus clone CH230-374A12, WORKING DRA...    46   2.3    1
(AC134667) Mus musculus chromosome 16 clone RP24-549B4 map 1...    46   2.3    1
(AC129611) Rattus norvegicus clone CH230-145H4, WORKING DRAF...    46   2.3    1
(AC128845) Rattus norvegicus clone CH230-454C18, WORKING DRA...    46   2.3    1
(AC125926) Rattus norvegicus clone CH230-460A3, WORKING DRAF...    46   2.3    1
(AC120764) Rattus norvegicus clone CH230-109K14, *** SEQUENC...    46   2.3    1
(AC120695) Rattus norvegicus clone CH230-19P15, *** SEQUENCI...    46   2.3    1
(AC120270) Rattus norvegicus clone CH230-503O14, *** SEQUENC...    46   2.3    1
(AC109698) Rattus norvegicus clone CH230-225F6, *** SEQUENCI...    46   2.3    1
(AC107597) Rattus norvegicus clone CH230-142A16, WORKING DRA...    46   2.3    1
(AC097922) Rattus norvegicus clone CH230-48B17, *** SEQUENCI...    46   2.3    1
(AC096615) Rattus norvegicus clone CH230-84O16, WORKING DRAF...    46   2.3    1
(AC094652) Rattus norvegicus clone CH230-4O21, WORKING DRAFT...    46   2.3    1
(CU633840) Pig DNA sequence *** SEQUENCING CANCELLED *** fro...    46   2.3    1
(AC074145) Mus musculus clone RP23-104I11, WORKING DRAFT SEQ...    46   2.3    1
(CU469152) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   2.3    1
(CU468595) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   2.3    1
(AC207884) Zea mays chromosome 3 clone CH201-90I6; ZMMBBc009...    46   2.3    1
(AC202614) Macaca mulatta clone CH250-3K6, WORKING DRAFT SEQ...    46   2.3    1
(AC198823) Nomascus leucogenys leucogenys clone CH271-148K17...    46   2.3    1
(AC193710) Nomascus leucogenys leucogenys clone CH271-332I6,...    46   2.3    1
(AC182041) Bos taurus clone CH240-510D18, WORKING DRAFT SEQU...    46   2.3    1
(AC179095) Strongylocentrotus purpuratus clone R3-4011B5, WO...    46   2.3    1
(AC173814) Bos taurus clone CH240-82P19, WORKING DRAFT SEQUE...    46   2.3    1
(AC172382) Strongylocentrotus purpuratus clone R3-1004I17, W...    46   2.3    1
(AC172197) Bos taurus clone CH240-97P22, WORKING DRAFT SEQUE...    46   2.3    1
(AC165297) Mus musculus chromosome 1 clone RP24-291N10 map 1...    46   2.3    1
(AC024087) Homo sapiens chromosome 8 clone RP11-440B23, WORK...    46   2.3    1
(AC004469) Homo sapiens clone CTB-58E15, WORKING DRAFT SEQUE...    46   2.3    1
(AZ557059) RPCI-23-178C13.TV RPCI-23 Mus musculus genomic cl...    46   2.3    1
(ET000907) ZMMBHp0004P15.r ZMMBHp Zea mays genomic clone ZMM...    46   2.3    1
(DX872788) ZMMBLf0004F06.r ZMMBLf Zea mays genomic clone ZMM...    46   2.3    1
(DX872209) ZMMBLf0003A14.f ZMMBLf Zea mays genomic clone ZMM...    46   2.3    1
(DX871426) ZMMBLf0001C09.f ZMMBLf Zea mays genomic clone ZMM...    46   2.3    1
(DX406136) GR_Sa0006C21.b1 Gossypium raimondii WGS library G...    46   2.3    1
(DX405918) GR_Sa0004L02.b1 Gossypium raimondii WGS library G...    46   2.3    1
(CZ360976) ZMMBF0103C06f ZMMBF Zea mays genomic clone ZMMBF0...    46   2.3    1
(CZ285238) cp40b03.r Candida parapsilosis Random Genomic Lib...    46   2.3    1
(CZ285237) cp40b03.f Candida parapsilosis Random Genomic Lib...    46   2.3    1
(CU124565) Equus caballus GSS, BAC clone CH241-239B20, T7 en...    46   2.3    1
(CT295073) Sus scrofa genomic clone CH242-64I16, genomic sur...    46   2.3    1
(AG731406) Macaca fuscata fuscata DNA, clone: MSB2-186P24_R,...    46   2.3    1
(CE666710) tigr-gss-dog-17000313692640 Dog Library Canis lup...    46   2.3    1
(CC385689) PUEHH21TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    46   2.3    1
(B49533) RPCI11-6N24.TV RPCI-11 Homo sapiens genomic clone R...    46   2.3    1
(B49528) RPCI11-6N20.TV RPCI-11 Homo sapiens genomic clone R...    46   2.3    1
(BZ784967) PUGAN93TB ZM_0.6_1.0_KB Zea mays genomic clone ZM...    46   2.3    1
(BZ145256) CH230-503O14.TV CHORI-230 Segment 2 Rattus norveg...    46   2.3    1
(EE258126) 9837 Zea mays embryo sac cDNA library Zea mays cD...    46   2.3    1
(EC865846) zea441B05 Normalized cDNA library from mix tissue...    46   2.3    1
(DV509240) ZM_BFb0188D17.f ZM_BFb Zea mays cDNA 3', mRNA seq...    46   2.3    1
(DT652887) ZM_BFb0119I16.f ZM_BFb Zea mays cDNA 3', mRNA seq...    46   2.3    1
(CO500809) KH01014G08 KH01 Ipomoea batatas cDNA, mRNA sequence.    46   2.3    1
(CK145022) 3530_1_15_1_C03.x_12 3530 - Full length cDNA libr...    46   2.3    1
(CF638234) zmrww00_0B20-015-c07.s1 zmrww00 Zea mays cDNA 3',...    46   2.3    1
(CF625370) zmrws05_0A20-016-a12.s4 zmrws05 Zea mays cDNA 3',...    46   2.3    1
(CD978327) QAF41g10.yg QAF Zea mays cDNA clone QAF41g10, mRN...    46   2.3    1
(CD977420) QAF2d07.yg QAF Zea mays cDNA clone QAF2d07, mRNA ...    46   2.3    1
(CD976123) QAF13b03.yg QAF Zea mays cDNA clone QAF13b03, mRN...    46   2.3    1
(CD976121) QAF13b01.yg QAF Zea mays cDNA clone QAF13b01, mRN...    46   2.3    1
(FL479356) 2685418 CERES-197 Zea mays cDNA clone 298899 3', ...    46   2.3    1
(FE151421) LV_LO_RA009P23f Litopenaeus vannamei lymphoid org...    46   2.3    1
(FE151420) LV_LO_RA009L23r Litopenaeus vannamei lymphoid org...    46   2.3    1
(EY320423) CAWX7379.rev CAWX Helobdella robusta Primary Earl...    46   2.3    1
(EY313346) CAWX24904.rev CAWX Helobdella robusta Primary Ear...    46   2.3    1
(EY299202) CAWX14334.rev CAWX Helobdella robusta Primary Ear...    46   2.3    1
(EY292852) CAWX10792.rev CAWX Helobdella robusta Primary Ear...    46   2.3    1
(EY292012) CAWX10320.rev CAWX Helobdella robusta Primary Ear...    46   2.3    1
(AC181340) Strongylocentrotus purpuratus clone R3-4019M16, W...    42   2.6    7
(CU466535) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   2.6    4
(AC175870) Strongylocentrotus purpuratus clone R3-15F19, WOR...    40   2.8    3
(DX556218) GH_MBb0053N16f GH_MBb Gossypium hirsutum genomic ...    42   2.8    2
(AC106786) Homo sapiens chromosome 5 clone RP11-359P5, compl...    42   2.9    2
(AC189388) Brassica rapa subsp. pekinensis clone KBrB053D06,...    44   3.0    4
(AC173631) Strongylocentrotus purpuratus clone R3-3074I1, WO...    44   3.0    2
(AL591475) Human DNA sequence from clone RP11-314C16 on chro...    40   3.2    6
(AC174129) Strongylocentrotus purpuratus clone R3-1023C6, WO...    44   3.3    3
(AC020629) Homo sapiens 12q BAC RP11-76E16 (Roswell Park Can...    40   3.4    3
(AM483868) Vitis vinifera, whole genome shotgun sequence, co...    42   3.5    3
(CU302287) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   3.7    4
(AC127217) Rattus norvegicus clone CH230-11M5, WORKING DRAFT...    40   3.7    4
(AC204739) Pan troglodytes BAC clone CH251-288P6 from chromo...    40   3.8    2
(BG220434) RST40218 Athersys RAGE Library Homo sapiens cDNA,...    40   3.8    2
(AC073883) Mus musculus strain C57BL/6J chromosome 3 clone r...    40   3.9    4
(AC091842) Homo sapiens chromosome 5 clone CTD-2155B8, compl...    44   4.0    2
(AC156408) Bos taurus clone CH240-58G21, WORKING DRAFT SEQUE...    40   4.0    3
(AC024908) Homo sapiens 10 BAC RP11-446F3 (Roswell Park Canc...    40   4.1    3
(AC119985) Mus musculus chromosome 5, clone RP24-502C10, com...    40   4.1    4
(BG194023) RST13165 Athersys RAGE Library Homo sapiens cDNA,...    40   4.2    2
(BG218555) RST38181 Athersys RAGE Library Homo sapiens cDNA,...    40   4.2    2
(BG207915) RST27403 Athersys RAGE Library Homo sapiens cDNA,...    40   4.2    2
(BX000989) Mouse DNA sequence from clone RP23-33D17 on chrom...    34   4.3    2
(AC222524) Macaca mulatta clone CH250-49B4, WORKING DRAFT SE...    40   4.3    2
(AC073958) Homo sapiens BAC clone RP11-533L22 from 7, comple...    34   4.4    2
(AC010808) Homo sapiens clone RP11-3C7, WORKING DRAFT SEQUEN...    34   4.4    2
(AP009325) Musa balbisiana genomic DNA, BAC clone:MBP_71C19.       34   4.4    2
(AC186557) Pan troglodytes BAC clone CH251-51L5 from chromos...    42   4.4    2
(AC177505) Strongylocentrotus purpuratus clone R3-9D2, WORKI...    40   4.4    3
(AC158542) Pan troglodytes BAC clone CH251-262O17 from chrom...    42   4.5    2
(AC092513) Papio anubis clone RP41-474E21, WORKING DRAFT SEQ...    42   4.5    2
(AC163766) Pan troglodytes BAC clone CH251-115P4 from chromo...    42   4.7    2
(AC162819) Bos taurus clone CH240-126C8, WORKING DRAFT SEQUE...    40   4.8    2
(AC224890) Bos taurus clone CH240-473O2, WORKING DRAFT SEQUE...    38   4.9    2
(CR154150) Forward strand read from insert in 3'HPRT inserti...    42   4.9    2
(AC010550) Homo sapiens chromosome 16 clone RP11-550L9, WORK...    42   5.0    2
(CE653434) tigr-gss-dog-17000367975954 Dog Library Canis lup...    40   5.1    2
(AC184175) Pan troglodytes BAC clone CH251-620C8 from chromo...    42   5.2    2
(AC146462) Saimiri boliviensis boliviensis clone CH254-219L2...    40   5.3    2
(CR751550) Human DNA sequence from clone DASS-94P17 on chrom...    42   5.3    3
(AC163736) Pan troglodytes BAC clone CH251-545J2 from chromo...    42   5.4    3
(AC157654) Mus musculus BAC clone RP24-286J10 from chromosom...    40   5.5    4
(CR059629) Forward strand read from insert in 3'HPRT inserti...    42   5.6    2
(AP001793) Homo sapiens genomic DNA, chromosome 18 clone:RP1...    42   5.8    3
(CE234467) tigr-gss-dog-17000333372193 Dog Library Canis lup...    40   5.8    2
(AC072055) Homo sapiens chromosome 7 clone RP11-48C19, WORKI...    40   5.9    6
(AC113431) Homo sapiens chromosome 5 clone RP11-90F2, comple...    40   6.0    4
(AC212688) Pongo abelii chromosome UNKNOWN clone CH276-38I20...    44   6.1    3
(AC093929) Rattus norvegicus clone CH230-4B1, WORKING DRAFT ...    38   6.2    5
(AC096137) Rattus norvegicus clone CH230-26O5, *** SEQUENCIN...    40   6.3    4
(AC132780) Rattus norvegicus clone CH230-74L18, WORKING DRAF...    38   6.5    5
(AC015676) Homo sapiens chromosome 18 clone RP11-168M18 map ...    42   6.5    3
(AC008009) Homo sapiens 3 BAC RP11-436A20 (Roswell Park Canc...    40   6.6    3
(BH964463) odj09d02.g1 B.oleracea002 Brassica oleracea genom...    32   6.9    3
(BX470179) Human DNA sequence *** SEQUENCING CANCELLED *** f...    40   6.9    5
(AE014846) Plasmodium falciparum 3D7 chromosome 12, section ...    40   7.0    8
(AL109612) Human DNA sequence from clone RP5-1018A4 on chrom...    44   7.1    3
(AC164571) Pan troglodytes BAC clone CH251-967O8 from chromo...    42   7.3    3
(AC168964) Sorex araneus clone SA_Ba-226L10, WORKING DRAFT S...    40   7.4    6
(AC130747) Rattus norvegicus clone CH230-40M2, *** SEQUENCIN...    44   7.5    5
(CZ513150) GMW2-61A16a.g1 GMW2 Glycine max genomic, genomic ...    36   7.5    2
(CT574591) Pan troglodytes chromosome X clone RP43-006G14 ma...    40   7.9    2
(AC206076) Nomascus leucogenys leucogenys clone CH271-364L2,...    40   7.9    4
(AC146114) Pan troglodytes BAC clone RP43-22O2 from chromoso...    40   8.0    4
(AC215704) Homo sapiens FOSMID clone ABC11-49345800A3 from c...    42   8.1    4
(AL022099) Human DNA sequence from clone RP1-57E3 on chromos...    40   8.2    3
(AC177621) Strongylocentrotus purpuratus clone R3-1021A13, W...    38   8.3    4
(AZ499679) 1M0337P03R Mouse 10kb plasmid UUGC1M library Mus ...    40   8.6    2
(AC225374) Nomascus leucogenys chromosome UNK clone CH271-11...    40   8.6    4
(AL365499) Human DNA sequence from clone RP11-227E22 on chro...    40   8.6    2
(DQ826710) Perca flavescens clone PL3A7 microsatellite seque...    44   9.0    1
(DQ480435) Nesospiza wilkinsi clone 2 microsatellite sequence.     44   9.0    1
(CU855758) Zebrafish DNA sequence from clone CH211-247I17 in...    44   9.0    1
(CT027700) Zebrafish DNA sequence from clone DKEY-208F19 in ...    44   9.0    1
(CR792457) Zebrafish DNA sequence from clone DKEY-228B2 in l...    44   9.0    1
(BX537102) Zebrafish DNA sequence from clone DKEY-276L17 in ...    44   9.0    1
(BX294160) Zebrafish DNA sequence from clone CH211-285I13 in...    44   9.0    1
(BX005278) Zebrafish DNA sequence from clone CH211-194P15.         44   9.0    1
(CR933735) Mouse DNA sequence from clone DN-199E5 on chromos...    44   9.0    1
(AY158230) Mus musculus strain 129/SvJ chromosome 10 clone 1...    44   9.0    1
(AL935150) Mouse DNA sequence from clone RP24-482A24 on chro...    44   9.0    1
(AL929393) Mouse DNA sequence from clone RP23-94P7 on chromo...    44   9.0    1
(AL844222) Mouse DNA sequence from clone RP23-44P13 on chrom...    44   9.0    1
(AL807759) Mouse DNA sequence from clone RP23-373H1 on chrom...    44   9.0    1
(AL626765) Mouse DNA sequence from clone RP23-179N14 on chro...    44   9.0    1
(AL596117) Mouse DNA sequence from clone RP23-326P7 on chrom...    44   9.0    1
(AC163661) Mus musculus BAC clone RP23-288B18 from chromosom...    44   9.0    1
(AC162295) Mus musculus chromosome 1, clone RP24-232K22, com...    44   9.0    1
(AC154426) Mus musculus BAC clone RP24-199A21 from chromosom...    44   9.0    1
(AC147560) Mus musculus BAC clone RP23-451A8 from 9, complet...    44   9.0    1
(AC140487) Mus musculus BAC clone RP24-139I9 from chromosome...    44   9.0    1
(AC140376) Mus musculus BAC clone RP24-78P21 from 12, comple...    44   9.0    1
(AC140243) Mus musculus BAC clone RP23-470F3 from 9, complet...    44   9.0    1
(AC133459) Mus musculus chromosome 12, clone RP23-383O15, co...    44   9.0    1
(AC133184) Mus musculus BAC clone RP24-186A17 from chromosom...    44   9.0    1
(AC130659) Mus musculus chromosome 1, clone RP23-326C19, com...    44   9.0    1
(AC125488) Mus musculus BAC clone RP23-75M24 from 12, comple...    44   9.0    1
(AC124627) Mus musculus chromosome 19, clone RP23-435K14, co...    44   9.0    1
(AC122734) Mus musculus chromosome 10, clone RP24-108E17, co...    44   9.0    1
(AC122050) Mus musculus BAC clone RP24-457L7 from chromosome...    44   9.0    1
(AC121926) Mus musculus BAC clone RP24-202B3 from chromosome...    44   9.0    1
(AC092498) Mus musculus strain C57BL/6J chromosome 9 clone r...    44   9.0    1
(AC091681) Mus musculus strain C57BL/6J chromosome 10 clone ...    44   9.0    1
(AB057422) Mus musculus gene for tesmin, complete cds, strai...    44   9.0    1
(CT574566) Pan troglodytes chromosome X clone CH251-413C05 m...    44   9.0    1
(CT573418) Pan troglodytes chromosome X clone PTB-046H01 map...    44   9.0    1
(BS000659) Pan troglodytes chromosome Y clone:PTBY-005K16, c...    44   9.0    1
(AC214252) Macaca mulatta  BAC CH250-384L17 (Children's Hosp...    44   9.0    1
(AC205921) Pongo abelii BAC clone CH276-479M4 from chromosom...    44   9.0    1
(AC200467) Rhesus Macaque  BAC CH250-310K20 () complete sequ...    44   9.0    1
(AC198055) Pongo abelii BAC clone CH276-116C6 from chromosom...    44   9.0    1
(AC194567) Pan troglodytes BAC clone CH251-114B1 from chromo...    44   9.0    1
(AC194563) Pan troglodytes BAC clone CH251-330J20 from chrom...    44   9.0    1
(AC191745) Pan troglodytes BAC clone CH251-449L7 from chromo...    44   9.0    1
(AC183602) Pan troglodytes BAC clone CH251-350L8 from chromo...    44   9.0    1
(AC146203) Pan troglodytes BAC clone CH251-417F24 from Y, co...    44   9.0    1
(AC144026) Rhesus Macaque  BAC CH250-271J18 () complete sequ...    44   9.0    1
(CR382136) Debaryomyces hansenii strain CBS767 chromosome A ...    44   9.0    1
(AM989980) Zygosaccharomyces rouxii strain CBS 732 Contig1.        44   9.0    1
(DJ433176) Method of screening for a substance capable of en...    44   9.0    1
(AX647009) Sequence 1201 from Patent EP1270724.                    44   9.0    1
(AX646785) Sequence 977 from Patent EP1270724.                     44   9.0    1
(AC187328) Canis Familiaris chromosome 16, clone XX-28F20, c...    44   9.0    1
(AE014134) Drosophila melanogaster chromosome 2L, complete s...    44   9.0    1
(AC093195) Drosophila melanogaster clone BACR16J09, complete...    44   9.0    1
(AC092219) Drosophila melanogaster, chromosome 2L, region 28...    44   9.0    1
(AC005834) Drosophila melanogaster DNA sequence (P1s DS01589...    44   9.0    1
(CT476837) Human DNA sequence from clone CH507-146P16 on chr...    44   9.0    1
(CR382285) Human DNA sequence from clone bP-21201H5 on chrom...    44   9.0    1
(AP006183) Homo sapiens genomic DNA, chromosome 8p12, clone:...    44   9.0    1
(AP004287) Homo sapiens genomic DNA, chromosome 8q23, clone:...    44   9.0    1
(AP003970) Homo sapiens genomic DNA, chromosome 11 clone:RP1...    44   9.0    1
(AP003127) Homo sapiens genomic DNA, chromosome 11q clone:RP...    44   9.0    1
(AP001034) Homo sapiens genomic DNA, chromosome 11q clone:RP...    44   9.0    1
(AL672040) Human DNA sequence from clone RP11-449L4 on chrom...    44   9.0    1
(AL603838) Human DNA sequence from clone RP11-35D17 on chrom...    44   9.0    1
(AL592188) Human DNA sequence from clone RP11-337M7 on chrom...    44   9.0    1
(AL445238) Human DNA sequence from clone RP11-394A14 on chro...    44   9.0    1
(AL391684) Human DNA sequence from clone RP11-441O15 on chro...    44   9.0    1
(AL391517) Human chromosome 14 DNA sequence BAC R-322L20 of ...    44   9.0    1
(AL365201) Human DNA sequence from clone RP11-39C22 on chrom...    44   9.0    1
(AL358235) Human DNA sequence from clone RP11-196N24 on chro...    44   9.0    1
(AL355586) Human DNA sequence from clone RP11-59I9 on chromo...    44   9.0    1
(AL353644) Human DNA sequence from clone RP11-164K15 on chro...    44   9.0    1
(AL158212) Human DNA sequence from clone RP11-57H14 on chrom...    44   9.0    1
(AL030999) Human DNA sequence from clone RP4-593F22 on chrom...    44   9.0    1
(AL023754) Human DNA sequence from clone RP1-272L16 on chrom...    44   9.0    1
(AC231843) Homo sapiens BAC clone RP11-135D3 from chromosome...    44   9.0    1
(AC225589) Homo sapiens FOSMID clone ABC14-1080422D13 from c...    44   9.0    1
(AC137794) Homo sapiens chromosome 5 clone RP11-434D11, comp...    44   9.0    1
(AC119043) Homo sapiens 3 BAC RP11-582I9 (Roswell Park Cance...    44   9.0    1
(AC118650) Homo sapiens chromosome 8, clone CTD-2326I15, com...    44   9.0    1
(AC108924) Homo sapiens chromosome 8, clone RP11-1113C19, co...    44   9.0    1
(AC105226) Homo sapiens chromosome 8, clone RP11-970F14, com...    44   9.0    1
(AC098860) Homo sapiens BAC clone RP11-229G4 from 4, complet...    44   9.0    1
(AC096726) Homo sapiens BAC clone RP11-25P15 from 4, complet...    44   9.0    1
(AC096632) Homo sapiens chromosome 1 clone RP11-38O14, compl...    44   9.0    1
(AC092673) Homo sapiens BAC clone RP11-624A4 from 4, complet...    44   9.0    1
(AC091189) Homo sapiens chromosome 8, clone RP11-606D13, com...    44   9.0    1
(AC090196) Homo sapiens chromosome 8, clone RP11-766A10, com...    44   9.0    1
(AC090114) Homo sapiens BAC clone RP11-212P7 from 7, complet...    44   9.0    1
(AC084026) Homo sapiens chromosome 8, clone RP11-486M23, com...    44   9.0    1
(AC083872) Homo sapiens chromosome 7 clone RP11-639H21, comp...    44   9.0    1
(AC080038) Homo sapiens chromosome 17, clone CTD-3035K23, co...    44   9.0    1
(AC073055) Homo sapiens BAC clone RP11-111J8 from 7, complet...    44   9.0    1
(AC068314) Homo sapiens chromosome 3 clone RP11-194D21 map 3...    44   9.0    1
(AC024060) Homo sapiens chromosome 3 clone RP11-97C16 map 3p...    44   9.0    1
(AC023812) Homo sapiens chromosome 3 clone 95e11 map 3p, com...    44   9.0    1
(AC020751) Homo sapiens chromosome 3 clone RP11-10H6 map 3p,...    44   9.0    1
(AC018646) Homo sapiens chromosome 7 clone RP11-344L16, comp...    44   9.0    1
(AC012158) Homo sapiens 12 BAC RP11-290I21 (Roswell Park Can...    44   9.0    1
(AC011443) Homo sapiens chromosome 19 clone CTC-218B8, compl...    44   9.0    1
(AC010605) Homo sapiens chromosome 19 clone CTB-189B5, compl...    44   9.0    1
(AC010281) Homo sapiens chromosome 5 clone CTC-553B9, comple...    44   9.0    1
(AC010135) Homo sapiens BAC clone RP11-128D13 from Y, comple...    44   9.0    1
(AC009495) Homo sapiens BAC clone RP11-490I2 from 2, complet...    44   9.0    1
(AC005821) Homo sapiens chromosome 17, clone hRPK.156_L_14, ...    44   9.0    1
(AC005138) Homo sapiens chromosome 17, clone hRPK.261_A_13, ...    44   9.0    1
(AC002528) Human BAC clone GS1-542D18 from 7q31-q32, complet...    44   9.0    1
(AC002523) Homo sapiens Xq28 BACs 360 F12, GSHB-555C13, comp...    44   9.0    1
(AC002316) Homo sapiens chromosome 17, clone CTB-11O23, comp...    44   9.0    1
(AC162743) Loxodonta africana clone VMRC15-377M21, WORKING D...    44   9.0    1
(AC159058) Bos taurus clone CH240-54L15, WORKING DRAFT SEQUE...    44   9.0    1
(AC157394) Bos taurus clone CH240-46H2, WORKING DRAFT SEQUEN...    44   9.0    1
(AC152858) Papio anubis clone RP41-112D10, WORKING DRAFT SEQ...    44   9.0    1
(AC152020) Papio anubis clone RP41-182F1, WORKING DRAFT SEQU...    44   9.0    1
(AC151525) Medicago truncatula clone mth2-77j8, WORKING DRAF...    44   9.0    1
(AC149980) Strongylocentrotus purpuratus clone R3-32A6, WORK...    44   9.0    1
(AC146531) Pongo abelii clone CH253-65C24, WORKING DRAFT SEQ...    44   9.0    1
(AC139973) Rattus norvegicus clone CH230-262K17, WORKING DRA...    44   9.0    1
(AC136816) Rattus norvegicus clone CH230-88H24, *** SEQUENCI...    44   9.0    1
(AC132051) Rattus norvegicus clone CH230-138P5, *** SEQUENCI...    44   9.0    1
(AC131905) Homo sapiens chromosome 8 clone CTD-2306G23 map 8...    44   9.0    1
(AC129087) Rattus norvegicus clone CH230-42D20, *** SEQUENCI...    44   9.0    1
(AC128524) Rattus norvegicus clone CH230-25A8, *** SEQUENCIN...    44   9.0    1
(AC128495) Rattus norvegicus clone CH230-14C15, *** SEQUENCI...    44   9.0    1
(AC128078) Rattus norvegicus clone CH230-101K2, WORKING DRAF...    44   9.0    1
(AC125742) Rattus norvegicus clone CH230-11E4, *** SEQUENCIN...    44   9.0    1
(AC123495) Rattus norvegicus clone CH230-103I13, *** SEQUENC...    44   9.0    1
(AC120735) Rattus norvegicus clone CH230-255L7, *** SEQUENCI...    44   9.0    1
(AC119937) Mus musculus clone RP24-264L3, WORKING DRAFT SEQU...    44   9.0    1
(AC116930) Papio anubis clone RP41-133I1, WORKING DRAFT SEQU...    44   9.0    1
(AC116260) Rattus norvegicus clone CH230-152M4, *** SEQUENCI...    44   9.0    1
(AC114176) Rattus norvegicus clone CH230-184C10, *** SEQUENC...    44   9.0    1
(AC114133) Rattus norvegicus clone CH230-132M15, *** SEQUENC...    44   9.0    1
(AC112403) Rattus norvegicus clone CH230-191A1, *** SEQUENCI...    44   9.0    1
(AC111739) Rattus norvegicus clone CH230-65C22, *** SEQUENCI...    44   9.0    1
(AC107413) Rattus norvegicus clone CH230-89G13, WORKING DRAF...    44   9.0    1
(AC106272) Rattus norvegicus clone CH230-229F7, *** SEQUENCI...    44   9.0    1
(AC103457) Rattus norvegicus clone CH230-42P7, *** SEQUENCIN...    44   9.0    1
(AC102870) Mus musculus clone RP24-555O5, LOW-PASS SEQUENCE ...    44   9.0    1
(AC101029) Mus musculus clone RP23-84I16, LOW-PASS SEQUENCE ...    44   9.0    1
(AC099274) Rattus norvegicus clone CH230-23O6, *** SEQUENCIN...    44   9.0    1
(AC097684) Rattus norvegicus clone CH230-64B2, *** SEQUENCIN...    44   9.0    1
(AC097651) Homo sapiens chromosome 4 clone RP11-130F6, WORKI...    44   9.0    1
(AC096177) Rattus norvegicus clone CH230-11D4, *** SEQUENCIN...    44   9.0    1
(AC096166) Rattus norvegicus clone CH230-11H6, *** SEQUENCIN...    44   9.0    1
(AC095639) Rattus norvegicus clone CH230-8K8, *** SEQUENCING...    44   9.0    1
(AC095231) Rattus norvegicus clone CH230-10G22, *** SEQUENCI...    44   9.0    1
(AC095197) Rattus norvegicus clone CH230-9K18, *** SEQUENCIN...    44   9.0    1
(AC094647) Rattus norvegicus clone CH230-4N1, WORKING DRAFT ...    44   9.0    1
(FP085377) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.0    1
(CU915387) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.0    1
(CU915386) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.0    1
(CU915257) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.0    1
(CU633971) Human DNA sequence *** SEQUENCING IN PROGRESS ***...    44   9.0    1
(CU607023) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.0    1
(AC091476) Mus musculus chromosome 11 clone RP23-396K24 map ...    44   9.0    1
(AC090401) Homo sapiens chromosome 11 clone RP11-729B4 map 11.     44   9.0    1
(AC087107) Homo sapiens chromosome 4 clone CTD-2320N4 map 4,...    44   9.0    1
(AC073224) Homo sapiens chromosome 8 clone RP11-606D13, WORK...    44   9.0    1
(AC068881) Homo sapiens chromosome 2 clone RP11-372E22 map 2...    44   9.0    1
(AC068586) Homo sapiens chromosome 1 clone RP11-275B16 map 1...    44   9.0    1
(AC068443) Homo sapiens chromosome 17 clone RP11-462C21 map ...    44   9.0    1
(AC055724) Homo sapiens chromosome 12 clone RP11-985O23, WOR...    44   9.0    1
(AC027787) Homo sapiens chromosome 11 clone RP11-196E16 map ...    44   9.0    1
(AC026561) Homo sapiens chromosome 8 clone RP11-517N21 map 8...    44   9.0    1
(CU570744) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.0    1
(CU499016) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.0    1
(CU487223) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.0    1
(CU481219) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.0    1
(CU468029) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.0    1
(CU467569) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.0    1
(CT961051) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.0    1
(CT025629) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***...    44   9.0    1
(AP007850) Lotus japonicus genomic DNA, chromosome 1, clone:...    44   9.0    1
(AL590137) Human DNA sequence *** SEQUENCING IN PROGRESS ***...    44   9.0    1
(AL355134) Human DNA sequence *** SEQUENCING CANCELLED *** f...    44   9.0    1
(AL158162) Human DNA sequence *** SEQUENCING CANCELLED *** f...    44   9.0    1
(AF277372) Homo sapiens chromosome 8 clone RP11-766A10 map 8...    44   9.0    1
(AC225735) Pan troglodytes clone CH251-496J18, WORKING DRAFT...    44   9.0    1
(AC218063) Callithrix jacchus clone CH259-368B23, WORKING DR...    44   9.0    1
(AC217759) Procavia capensis clone CH280-284L15, WORKING DRA...    44   9.0    1
(AC217389) Pongo abelii chromosome UNKNOWN clone CH276-519C1...    44   9.0    1
(AC214870) Pongo abelii clone CH253-492B14, WORKING DRAFT SE...    44   9.0    1
(AC213817) Oryza glaberrima clone OG_BBa0067H16, *** SEQUENC...    44   9.0    1
(AC212957) Chlorocebus aethiops clone CH252-342M1, WORKING D...    44   9.0    1
(AC210744) Pongo abelii chromosome UNKNOWN clone CH276-98O16...    44   9.0    1
(AC209594) Chlorocebus aethiops clone CH252-194N17, WORKING ...    44   9.0    1
(AC203733) Sorex araneus clone SA_Ba-176G14, WORKING DRAFT S...    44   9.0    1
(AC202759) Callithrix jacchus clone CH259-54B7, WORKING DRAF...    44   9.0    1
(AC200920) Strongylocentrotus purpuratus clone R3-1013N9, WO...    44   9.0    1
(AC199461) Macaca mulatta clone CH250-137H17, WORKING DRAFT ...    44   9.0    1
(AC196282) Pan troglodytes chromosome 7 clone CH251-503P6, W...    44   9.0    1
(AC195719) Sorex araneus clone SA_Ba-100P21, WORKING DRAFT S...    44   9.0    1
(AC195048) Callicebus moloch clone LB5-322H2, WORKING DRAFT ...    44   9.0    1
(AC194526) Sorex araneus clone SA_Ba-218B18, WORKING DRAFT S...    44   9.0    1
(AC193707) Aotus nancymaae clone CH258-193M6, WORKING DRAFT ...    44   9.0    1
(AC193076) Aotus nancymaae clone CH258-461E2, WORKING DRAFT ...    44   9.0    1
(AC191910) Sorex araneus clone SA_Ba-601C1, WORKING DRAFT SE...    44   9.0    1
(AC188290) Aotus nancymaae clone CH258-479N20, WORKING DRAFT...    44   9.0    1
(AC180743) Strongylocentrotus purpuratus clone R3-3083B11, W...    44   9.0    1
(AC179787) Strongylocentrotus purpuratus clone R3-1015C19, W...    44   9.0    1
(AC179280) Strongylocentrotus purpuratus clone R3-45F02, WOR...    44   9.0    1
(AC178846) Strongylocentrotus purpuratus clone R3-26F6, WORK...    44   9.0    1
(AC174960) Pan troglodytes chromosome UNKNOWN clone CH251-81...    44   9.0    1
(AC174253) Strongylocentrotus purpuratus clone R3-3039P7, WO...    44   9.0    1
(AC172600) Bos taurus clone CH240-260L13, WORKING DRAFT SEQU...    44   9.0    1
(AC172108) Macaca mulatta clone CH250-275F21, *** SEQUENCING...    44   9.0    1
(AC171063) Macaca mulatta clone CH250-360B11, WORKING DRAFT ...    44   9.0    1
(AC169164) Loxodonta africana clone VMRC15-290K7, WORKING DR...    44   9.0    1
(AC166199) Colobus guereza clone CH272-14P14, WORKING DRAFT ...    44   9.0    1
(AC163732) Pan troglodytes chromosome Y clone CH251-1000O3, ...    44   9.0    1
(AC163717) Pan troglodytes chromosome Y clone CH251-864E18, ...    44   9.0    1
(AC163674) Mus musculus chromosome 12 clone RP23-19B13, WORK...    44   9.0    1
(AC021240) Homo sapiens clone RP11-344N2, WORKING DRAFT SEQU...    44   9.0    1
(AC020715) Homo sapiens chromosome 19 clone RP11-446K10, WOR...    44   9.0    1
(AC020004) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    44   9.0    1
(AC016916) Homo sapiens chromosome 6 clone RP11-687L3, WORKI...    44   9.0    1
(AC015840) Homo sapiens clone RP11-24D1, WORKING DRAFT SEQUE...    44   9.0    1
(AC008678) Homo sapiens chromosome 5 clone CTB-47E15, WORKIN...    44   9.0    1
(BH269465) CH230-82O16.TV CHORI-230 Segment 1 Rattus norvegi...    44   9.0    1
(AZ971799) 2M0245K24F Mouse 10kb plasmid UUGC2M library Mus ...    44   9.0    1
(AZ467684) 1M0279C15F Mouse 10kb plasmid UUGC1M library Mus ...    44   9.0    1
(AZ196933) SP_1033_B1_E10_SP6E Strongylocentrotus purpuratus...    44   9.0    1
(AQ739944) HS_5506_A1_D08_T7A RPCI-11 Human Male BAC Library...    44   9.0    1
(AQ583332) RPCI-11-461A17.TV RPCI-11 Homo sapiens genomic cl...    44   9.0    1
(AQ472504) CITBI-E1-2587L14.TR CITBI-E1 Homo sapiens genomic...    44   9.0    1
(AQ428459) CITBI-E1-2564L5.TF CITBI-E1 Homo sapiens genomic ...    44   9.0    1
(ER766434) SB_BBc222-E24.R SB_BBc Sorghum bicolor genomic 3'...    44   9.0    1
(ER476561) 1093015240392 Global-Ocean-Sampling_GS-35-01-01-1...    44   9.0    1
(EJ753492) 1092963054839 Global-Ocean-Sampling_GS-30-02-01-1...    44   9.0    1
(EJ740918) 1092962017630 Global-Ocean-Sampling_GS-30-02-01-1...    44   9.0    1
(EJ578230) 1092960127900 Global-Ocean-Sampling_GS-29-01-01-1...    44   9.0    1
(EJ371695) 1092963726889 Global-Ocean-Sampling_GS-28-01-01-1...    44   9.0    1
(ED534287) KBrB126H15R KBrB, Brassica rapa BamHI BAC library...    44   9.0    1
(ED488502) MUGQ_CH252P117G12T7_CN76_042 CHORI-252 Vervet Mon...    44   9.0    1
(AG983237) Hemicentrotus pulcherrimus BAC clone: BUB1-04A06_...    44   9.0    1
(DE175777) Bombyx mori genomic DNA, Fosmid clone:RO0326-M02_R.     44   9.0    1
(CT415185) Sus scrofa genomic clone CH242-300L21, genomic su...    44   9.0    1
(CT353526) Sus scrofa genomic clone CH242-465B10, genomic su...    44   9.0    1
(CT062930) Sus scrofa genomic clone PigE-50J1, genomic surve...    44   9.0    1
(CT062891) Sus scrofa genomic clone PigE-50I1, genomic surve...    44   9.0    1
(AG586743) Mus musculus molossinus DNA, clone:MSMg01-514D05....    44   9.0    1
(AG507118) Mus musculus molossinus DNA, clone:MSMg01-409L02....    44   9.0    1
(AG505765) Mus musculus molossinus DNA, clone:MSMg01-407O19....    44   9.0    1
(AG495938) Mus musculus molossinus DNA, clone:MSMg01-395A07....    44   9.0    1
(CE849091) tigr-gss-dog-17000332980532 Dog Library Canis lup...    44   9.0    1
(CE752678) tigr-gss-dog-17000369628412 Dog Library Canis lup...    44   9.0    1
(CE645580) tigr-gss-dog-17000367170499 Dog Library Canis lup...    44   9.0    1
(CE570745) tigr-gss-dog-17000327505980 Dog Library Canis lup...    44   9.0    1
(CE338024) tigr-gss-dog-17000334058204 Dog Library Canis lup...    44   9.0    1
(CE309951) tigr-gss-dog-17000360574665 Dog Library Canis lup...    44   9.0    1

>(AB038152) Dictyostelium discoideum Dd4E-BP mRNA for 4E-binding
           protein homolog, complete cds.
          Length = 714

 Score =  494 bits (249), Expect(7) = 0.0
 Identities = 249/249 (100%)
 Strand = Plus / Plus


Query: 345 gtattttaaatatagttaaaagaaaaatgtcaacaacaagagcaattccagtatctttaa 404
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gtattttaaatatagttaaaagaaaaatgtcaacaacaagagcaattccagtatctttaa 391


Query: 405 aggatagatcagatatcgatttttcaacatcattaggtggcactttatatggtactactc 464
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aggatagatcagatatcgatttttcaacatcattaggtggcactttatatggtactactc 451


Query: 465 caggtggcacaaagattgtttatgatcgtaatgccttattacaatatcgtaattcaccac 524
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 caggtggcacaaagattgtttatgatcgtaatgccttattacaatatcgtaattcaccac 511


Query: 525 tctcaaaaactccaccaccacaattagctcatattacaaatactgaattaaacaagaaag 584
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tctcaaaaactccaccaccacaattagctcatattacaaatactgaattaaacaagaaag 571


Query: 585 ttgaaaaat 593
           |||||||||
Sbjct: 572 ttgaaaaat 580

 Score =  135 bits (68), Expect(7) = 0.0
 Identities = 68/68 (100%)
 Strand = Plus / Plus


Query: 656 gacgatgatattttcacaatggaataaggggagaaagaaagaaagagaaagtagtattgt 715
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gacgatgatattttcacaatggaataaggggagaaagaaagaaagagaaagtagtattgt 702


Query: 716 ataaattt 723
           ||||||||
Sbjct: 703 ataaattt 710

 Score = 85.7 bits (43), Expect(7) = 0.0
 Identities = 43/43 (100%)
 Strand = Plus / Plus


Query: 27 aacaccttttgttatataataaatattcattgtatataataac 69
          |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 aacaccttttgttatataataaatattcattgtatataataac 56

 Score = 46.1 bits (23), Expect(7) = 0.0
 Identities = 23/23 (100%)
 Strand = Plus / Plus


Query: 196 acacattcagtcataattttagt 218
           |||||||||||||||||||||||
Sbjct: 183 acacattcagtcataattttagt 205

 Score = 40.1 bits (20), Expect(7) = 0.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus


Query: 78 gtttatttaataacaatttc 97
          ||||||||||||||||||||
Sbjct: 65 gtttatttaataacaatttc 84

 Score = 34.2 bits (17), Expect(7) = 0.0
 Identities = 17/17 (100%)
 Strand = Plus / Plus


Query: 164 tataatagaaaatatca 180
           |||||||||||||||||
Sbjct: 151 tataatagaaaatatca 167

 Score = 34.2 bits (17), Expect(7) = 0.0
 Identities = 17/17 (100%)
 Strand = Plus / Plus


Query: 265 aagactttaatagaaat 281
           |||||||||||||||||
Sbjct: 252 aagactttaatagaaat 268

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 742,242,467
Number of extensions: 54376734
Number of successful extensions: 7586255
Number of sequences better than 10.0: 523
Length of query: 911
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 887
Effective length of database: 96,409,374,237
Effective search space: 85515114948219
Effective search space used: 85515114948219
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.20
Homology vs Protein 
Query= Contig-U16089-1 (Contig-U16089-1Q) /CSM_Contig/Contig-U16089-1Q.Seq.d
         (911 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB038152_1(AB038152|pid:none) Dictyostelium discoideum Dd4E-BP m...   123   1e-26
(Q54DU8) RecName: Full=Eukaryotic translation initiation factor ...   120   5e-26
AM498288_1(AM498288|pid:none) Strongylocentrotus purpuratus mRNA...    44   0.006
BC064150_1(BC064150|pid:none) Xenopus tropicalis eukaryotic tran...    44   0.008
BT043700_1(BT043700|pid:none) Salmo salar clone HM5_2305 eukaryo...    42   0.022
BC075198_1(BC075198|pid:none) Xenopus laevis MGC83416 protein, m...    41   0.049
AM161045_1(AM161045|pid:none) Sphaerechinus granularis partial m...    41   0.064
BT043540_1(BT043540|pid:none) Salmo salar clone HM4_1852 eukaryo...    40   0.11
AL929330_7(AL929330|pid:none) Zebrafish DNA sequence from clone ...    39   0.19
BT074096_1(BT074096|pid:none) Oncorhynchus mykiss clone omyk-evo...    39   0.24
BT049639_1(BT049639|pid:none) Salmo salar clone ssal-eve-543-228...    39   0.32
CR542240_1(CR542240|pid:none) Homo sapiens full open reading fra...    38   0.54
(P70445) RecName: Full=Eukaryotic translation initiation factor ...    38   0.54
AK313724_1(AK313724|pid:none) Homo sapiens cDNA, FLJ94321, highl...    38   0.54
BC100638_1(BC100638|pid:none) Rattus norvegicus eukaryotic trans...    38   0.54
BT044888_1(BT044888|pid:none) Salmo salar clone ssal-rgf-506-262...    38   0.54
AK133912_1(AK133912|pid:none) Mus musculus 8 days embryo whole b...    38   0.54
BT079121_1(BT079121|pid:none) Esox lucius clone eluc-evq-521-169...    37   0.92
(Q98TT6) RecName: Full=Eukaryotic translation initiation factor ...    37   1.2
AK013033_1(AK013033|pid:none) Mus musculus 10, 11 days embryo wh...    37   1.2
BT050141_1(BT050141|pid:none) Salmo salar clone ssal-plnb-012-05...    37   1.2
BT043810_1(BT043810|pid:none) Salmo salar clone HM4_0556 eukaryo...    36   1.6
AF337389_1(AF337389|pid:none) Sus scrofa translation initiation ...    36   1.6
(Q0P5A7) RecName: Full=Eukaryotic translation initiation factor ...    36   1.6
(Q13541) RecName: Full=Eukaryotic translation initiation factor ...    36   1.6
AY892051_1(AY892051|pid:none) Synthetic construct Homo sapiens c...    36   1.6
(Q80VV3) RecName: Full=Eukaryotic translation initiation factor ...    36   2.1
BT075373_1(BT075373|pid:none) Osmerus mordax clone omor-eva-518-...    36   2.1
BT075642_1(BT075642|pid:none) Osmerus mordax clone omor-eva-512-...    35   2.7
BT075225_1(BT075225|pid:none) Osmerus mordax clone omor-rgc-516-...    35   3.5
AK167836_1(AK167836|pid:none) Mus musculus CRL-1722 L5178Y-R cDN...    35   3.5
BC057433_1(BC057433|pid:none) Danio rerio zgc:64137, mRNA (cDNA ...    34   7.8

>AB038152_1(AB038152|pid:none) Dictyostelium discoideum Dd4E-BP mRNA
           for 4E-binding protein homolog, complete cds.
          Length = 103

 Score =  123 bits (308), Expect = 1e-26
 Identities = 67/102 (65%), Positives = 67/102 (65%)
 Frame = +2

Query: 371 MSTTRAIPVSLKDRSDIDFXXXXXXXXXXXXXXXXKIVYDRNALLQYRNSPLSKTPPPQL 550
           MSTTRAIPVSLKDRSDIDF                KIVYDRNALLQYRNSPLSKTPPPQL
Sbjct: 1   MSTTRAIPVSLKDRSDIDFSTSLGGTLYGTTPGGTKIVYDRNALLQYRNSPLSKTPPPQL 60

Query: 551 AHITNTELNKKVEKSXXXXXXXXXXXXXXXXXXXNDDDIFTM 676
           AHITNTELNKKVEKS                   NDDDIFTM
Sbjct: 61  AHITNTELNKKVEKSTTTPTTTTPPTTTAKPKPTNDDDIFTM 102

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 777,314,763
Number of extensions: 9595273
Number of successful extensions: 21864
Number of sequences better than 10.0: 32
Number of HSP's gapped: 21797
Number of HSP's successfully gapped: 32
Length of query: 303
Length of database: 1,051,180,864
Length adjustment: 128
Effective length of query: 175
Effective length of database: 636,901,312
Effective search space: 111457729600
Effective search space used: 111457729600
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.47  gvh: -0.25  alm: 0.76  top: 0.53  tms: 0.00  mit: 0.25  mip: 0.03
 nuc: 1.02  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 76.0 %: nuclear
	 12.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: plasma membrane

>> prediction for Contig-U16089-1 is nuc
VS (DIR, S) 3
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 6
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 0