Contig-U16080-1
Contig ID Contig-U16080-1
Contig update 2004. 6.11
Contig sequence
>Contig-U16080-1 (Contig-U16080-1Q) /CSM_Contig/Contig-U16080-1Q.Seq.d
TATTTGCTCCAACTGCATTTGGTGGCAATGCACCACCAACAACTTCAACT
GCTGTTGAATCTTCAAAATTATTTGGCGGCGGTGGTATTACTTTCAATGC
ACCAAATATATTCGGTAACAATAGTAATCCATCAAACTTATTTGGCAGTG
GTAATAACAATTCTTCATCACTATTTGGTGGTAATTCAACAACCAATCCT
CCTCCATTATTTGGAAATAAATCTGATGTCAAAACTGAGGAATCAGAAAA
GAAGGCTGAAGCATGTACTCCATCACCATCAACCACATCAGGTAAATTAA
TTTGGAAATGTTTATGTTGTGAAACTGAAAATTCAGAAAAAGAAAAAAGC
TGCTCCGTTTGTATGGTCCCATTACCAAAGAATGTCAAATTTGAATCACC
AGCTTCTGAATCAAATACTAAACCATCATCAATATTTGCTCCAACTGCAT
TTGGTGGCAATGCACCACCAACAACTTCAACTGCTGTTGACTCTTCTAAA
TTATTTGGTGGTGGCGGCAGTAATACTATTACTTTCAACGCACCAACTTT
ATTCGGTAACAATAACAATAGTAATCCATCAAACTTATTTGGCAGTGGTA
ATAACAATTCTTCATCACTATTTGGTGGCAATTCAACAACCATCCAACCA
TCGCAATCATTATTTGGAACTAAGTCAACTGAAACCAAATCTGATGACCC
AATGTCGCTTAAAGAAATGTCAAATACAATTCAAGATAATGATGCTCAAA
ATTCAGATTCAGAATCACATGAAGAATTAGAATCAGGATCAGAAGAAGAA
GAAGAACAACAACAACAACCAAAAGTTACATTGTTATCATCTTCATTTAC
TCCCCCATCATTTGCTCCTCCATCATTTGCTCCATCATCATTTGCTCCAT
CATCATTTGCTCCTCCATCATTTGCTCCTCCAAAACCTGAAAATACATCA
ACACCAACATCATCAATCTTTGGATCATTTAGTTCTCAACCAAGTGGTGG
TGGTATTTCAGCATTTGGACCAGTTTCTAGTAATTCATCATCGTCTCCAT
TTGGAAGTGCATTTGGAAGCTCATTCGGTTCAACAACAATTCCATCATTT
GGACAATCTCAAGTTAATCCATTAACAATCAATCCAACCTCAACTTCTCC
AACACCAGTATTTGGAGGTTCAACTACCTCTCAATTCTCATCATCATCAC
CAGCACCAATTTTCGGCTCAACTGCAACTATTAAAACATTTGGTGATTTA
TCAAAATCATCCTCATCAAATAATGAAAATAAAGACCAACCATCATCATC
ACCTTCAAAACCATCACCATCACCATCAAATCCAACTTTTGAATCTATTA
ACAAAGAAAAAGAAAGTGTTGAGGATAAAAACCAAGAAAAAGATGAGTTA
AAAGATGAAAAAGATGAATTAAAAGATGAAAAGAAAAGAAAGAGAAAAGA
AAAGAAAGAAGAAACTGTCGAATCAGACAAAGAAAAAGAAAAAGAAGAAA
CATTAGAAGAAACTAAACAATCAATTGAATCTGATAAAAAAGAAGAGAAA
AAAGAAGAAAAATTAGAAGAAATTGTTCAATCAGACAAAGAAAAAGAAAA
AGAAGAAACTTTGGAAGAAACTAAACAATCAATTGAATCTGATAAAAAAG
AAGATGAAAAAGAAGAAAAGTTAGAAGAAATTGTTGAATCAGACAAAGAA
AAGGAAAAAGAAGAAACTTTAGAAGAAACCAAACAATCAATTGAATCTTG
ATAAAAAAGAAGATGAAAAAGAGAATGAAACAGAACCAGAAAAACATATT
GATAATGAAAAGAAAGATGAAAATGAAAAGAAAAATGAAGATGAAAAGAA
AGAAGAAGAAACTGTTGAATCAGACCAAGAAAAAGAAAAAGAAGAAACTA
AACAATCAATTGAATCTGAATCTGATAAAAAAGAAGATGAAATGGAAAAA
GAATTTTCAAGAATTGAAGAAACTATAAAACCAAACTTTTTTTCAACCAA
TAAAGATGAAAAAGATCAAGAAACCAAAGAAGATAATGGCAACAGTGACA
ACAAC----------GAAACACAACGGCCAGCACAGGAACACACCGACCC
CCACCGGAAGGCAGCCGGAAGCCAACGGACAAACAACGAACCCACACGGG
ACAACACAAGCGAACCCACGGACANCCAACCCAAACCCCAACACCACCAA
CACCAGTAGTTGGAGGTCCAACCACCGCCCAAGCCCCAGCACCACCACCA
GCACCAACCCCCGGCACAACAGCAACCACCAAAACACCCGGAGACCTAGC
AAAAACACCCACNGCAAATAAGGGGGACAAAGACCAACCATCATCATCAC
CATCACCAACAAAACCAACGCCTGAATCTACCACCAAAGAAGANAAAGCT
GATAATGTTGAAGACAAAACCGACNAAATAGAAGGGNANAAAGAAGATAG
TGAAGATGAGAAAGTTATCACTGAAGACACAAATAACCAAAGTGAAATAA
AAGTCGAAGAAAATAAAGAAGAAAATAAAGAAGAAAATAAAGAAGAAAAT
AAAGAANAAAATAAAGAAGT

Gap gap included
Contig length 2560
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 1054399
End point 1051831
Strand (PLUS/MINUS) MINUS
Number of clones 6
Number of EST 8
Link to clone list U16080
List of clone(s)

est1=AHG528F,1,664
est2=SFJ849E,76,1510
est3=SHL287Z,746,1447
est4=SLJ781Z,1259,1514
est5=SLJ127Z,1445,1744
est6=SLA341F,1586,1824
est7=SLJ781F,1721,2040
est8=SLA341Z,2056,2560
Translated Amino Acid sequence
yllqlhlvamhhqqlqlllnlqnylaavvllsmhqiysvtivihqtylavvitilhhylv
viqqpillhyleinlmsklrnqkrrlkhvlhhhqphqvn*fgnvyvvklkiqkkkkaapf
vwshyqrmsnlnhqllnqilnhhqyllqlhlvamhhqqlqllltllnylvvaavilllst
hqlysvtitivihqtylavvitilhhylvaiqqpsnhrnhylelsqlkpnlmtqcrlkkc
qiqfkimmlkiqiqnhmkn*nqdqkkkknnnnnqklhcyhlhllphhlllhhllhhhllh
hhlllhhlllqnlkihqhqhhqsldhlvlnqvvvvfqhldqflvihhrlhlevhleahsv
qqqfhhldnlklih*qsiqpqllqhqylevqlplnshhhhqhqfsaqlqllkhlviyqnh
phqimkiktnhhhhlqnhhhhhqiqllnlltkkkkvlriktkkkms*kmkkmn*kmkrke
rekkrkkklsnqtkkkkkkkh*kklnnqlnlikkkrkkkkn*kklfnqtkkkkkkklwkk
lnnqlnlikkkmkkkks*kkllnqtkkrkkkkl*KKPNNQLNLDKKEDEKENETEPEKHI
DNEKKDENEKKNEDEKKEEETVESDQEKEKEETKQSIESESDKKEDEMEKEFSRIEETIK
PNFFSTNKDEKDQETKEDNGNSDNN---

---NTTASTGTHRPPPEGSRKPTDKQRTHTGQHKRTHGXPTQTPTPPTPVVGGPTTAQAP
APPPAPTPGTTATTKTPGDLAKTPTANKGDKDQPSSSPSPTKPTPESTTKEXKADNVEDK
TDXIEGXKEDSEDEKVITEDTNNQSEIKVEENKEENKEENKEENKEXNKE


Translated Amino Acid sequence (All Frames)
Frame A:
yllqlhlvamhhqqlqlllnlqnylaavvllsmhqiysvtivihqtylavvitilhhylv
viqqpillhyleinlmsklrnqkrrlkhvlhhhqphqvn*fgnvyvvklkiqkkkkaapf
vwshyqrmsnlnhqllnqilnhhqyllqlhlvamhhqqlqllltllnylvvaavilllst
hqlysvtitivihqtylavvitilhhylvaiqqpsnhrnhylelsqlkpnlmtqcrlkkc
qiqfkimmlkiqiqnhmkn*nqdqkkkknnnnnqklhcyhlhllphhlllhhllhhhllh
hhlllhhlllqnlkihqhqhhqsldhlvlnqvvvvfqhldqflvihhrlhlevhleahsv
qqqfhhldnlklih*qsiqpqllqhqylevqlplnshhhhqhqfsaqlqllkhlviyqnh
phqimkiktnhhhhlqnhhhhhqiqllnlltkkkkvlriktkkkms*kmkkmn*kmkrke
rekkrkkklsnqtkkkkkkkh*kklnnqlnlikkkrkkkkn*kklfnqtkkkkkkklwkk
lnnqlnlikkkmkkkks*kkllnqtkkrkkkkl*KKPNNQLNLDKKEDEKENETEPEKHI
DNEKKDENEKKNEDEKKEEETVESDQEKEKEETKQSIESESDKKEDEMEKEFSRIEETIK
PNFFSTNKDEKDQETKEDNGNSDNN---

---etqrpaqehtdphrkaagsqrtnneptrdntseptdxqpkpqhhqhq*levqpppkp
qhhhqhqppaqqqppkhpet*qkhpxqirgtktnhhhhhhqqnqrlnlppkkxklimlkt
kptk*kgxkkivkmrklslktqitkvk*kskkikkkikkkikkkikxkikk

Frame B:
icsnciwwqcttnnfncc*ifkiiwrrwyyfqctkyir*q**sikliwqw**qffitiww
*fnnqsssiiwk*i*cqn*girkeg*smysitinhir*inlemfml*n*kfrkrkkllrl
ygpitkecqi*itsf*iky*tiinicsnciwwqcttnnfncc*lf*iiwwwrq*yyyfqr
tnfir*q*q**sikliwqw**qffitiwwqfnnhptiaiiiwn*vn*nqi**pnva*rnv
kynsr**cskfrfrit*riririrrrrrtttttksyiviifiyspiicssiicsiiicsi
iicssiicsskt*kyintniinlwii*fstkwwwyfsiwtsf**fiivsiwkciwklirf
nnnsiiwtiss*sinnqsnlnfsntsiwrfnylsiliiitstnfrlncny*niw*fikii
lik**k*rptiiitfktititiksnf*iy*qrkrkc*g*kprkr*vkr*kr*ikr*kekk
ekrkerrncrirqrkrkrrnirrn*tin*i**krrekrrkirrncsirqrkrkrrnfgrn
*tin*i**krr*krrkvrrnc*irqrkgkrrnfrrnqtin*ilikkkmkkrmkqnqknil
imkrkmkmkrkmkmkrkkkkllnqtkkkkkkklnnqlnlnlikkkmkwkknfqelkkl*n
qtffqpikmkkikkpkkimatvtt---

---khngqhrntptptgrqpeangqttnphgttqanprtxnpnpnttntsswrsnhrpsp
stttstnprhnsnhqntrrpsknthxk*ggqrptiiititnktna*iyhqrrxs**c*rq
nrxnrrxxrr**r*esyh*rhk*pk*nksrrk*rrk*rrk*rrk*rxk*rs

Frame C:
faptafggnappttstavessklfggggitfnapnifgnnsnpsnlfgsgnnnssslfgg
nsttnppplfgnksdvkteesekkaeactpspsttsgkliwkclccetensekekscsvc
mvplpknvkfespasesntkpssifaptafggnappttstavdssklfggggsntitfna
ptlfgnnnnsnpsnlfgsgnnnssslfggnsttiqpsqslfgtkstetksddpmslkems
ntiqdndaqnsdsesheelesgseeeeeqqqqpkvtllsssftppsfappsfapssfaps
sfappsfappkpentstptssifgsfssqpsgggisafgpvssnsssspfgsafgssfgs
ttipsfgqsqvnpltinptstsptpvfggsttsqfsssspapifgstatiktfgdlskss
ssnnenkdqpssspskpspspsnptfesinkekesvedknqekdelkdekdelkdekkrk
rkekkeetvesdkekekeetleetkqsiesdkkeekkeekleeivqsdkekekeetleet
kqsiesdkkedekeekleeivesdkekekeetleetkqsies**krr*kre*nrtrkty*
**ker*k*kek*r*kerrrnc*irprkrkrrn*tin*i*i**krr*ngkrifkn*rnykt
klffnq*r*krsrnqrr*wqq*qq---

---NTTASTGTHRPPPEGSRKPTDKQRTHTGQHKRTHGXPTQTPTPPTPVVGGPTTAQAP
APPPAPTPGTTATTKTPGDLAKTPTANKGDKDQPSSSPSPTKPTPESTTKEXKADNVEDK
TDXIEGXKEDSEDEKVITEDTNNQSEIKVEENKEENKEENKEENKEXNKE

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U16080-1 (Contig-U16080-1Q)
/CSM_Contig/Contig-U16080-1Q.Seq.d
(2570 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U16080-1 (Contig-U16080-1Q) /CSM_Contig/Conti... 1631 0.0
Contig-U15936-1 (Contig-U15936-1Q) /CSM_Contig/Conti... 672 0.0
Contig-U15158-1 (Contig-U15158-1Q) /CSM_Contig/Conti... 62 5e-09
Contig-U14955-1 (Contig-U14955-1Q) /CSM_Contig/Conti... 52 4e-06
Contig-U13001-1 (Contig-U13001-1Q) /CSM_Contig/Conti... 52 4e-06
Contig-U15270-1 (Contig-U15270-1Q) /CSM_Contig/Conti... 48 7e-05
Contig-U16304-1 (Contig-U16304-1Q) /CSM_Contig/Conti... 46 3e-04
Contig-U08964-1 (Contig-U08964-1Q) /CSM_Contig/Conti... 46 3e-04
Contig-U16268-1 (Contig-U16268-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U15751-1 (Contig-U15751-1Q) /CSM_Contig/Conti... 44 0.001

>Contig-U16080-1 (Contig-U16080-1Q) /CSM_Contig/Contig-U16080-1Q.Seq.d
Length = 2570

Score = 1631 bits (823), Expect = 0.0
Identities = 847/859 (98%)
Strand = Plus / Plus


Query: 1 tatttgctccaactgcatttggtggcaatgcaccaccaacaacttcaactgctgttgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatttgctccaactgcatttggtggcaatgcaccaccaacaacttcaactgctgttgaat 60


Query: 61 cttcaaaattatttggcggcggtggtattactttcaatgcaccaaatatattcggtaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttcaaaattatttggcggcggtggtattactttcaatgcaccaaatatattcggtaaca 120


Query: 121 atagtaatccatcaaacttatttggcagtggtaataacaattcttcatcactatttggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atagtaatccatcaaacttatttggcagtggtaataacaattcttcatcactatttggtg 180


Query: 181 gtaattcaacaaccaatcctcctccattatttggaaataaatctgatgtcaaaactgagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtaattcaacaaccaatcctcctccattatttggaaataaatctgatgtcaaaactgagg 240


Query: 241 aatcagaaaagaaggctgaagcatgtactccatcaccatcaaccacatcaggtaaattaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatcagaaaagaaggctgaagcatgtactccatcaccatcaaccacatcaggtaaattaa 300


Query: 301 tttggaaatgtttatgttgtgaaactgaaaattcagnnnnnnnnnnnngctgctccgttt 360
|||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 301 tttggaaatgtttatgttgtgaaactgaaaattcagaaaaagaaaaaagctgctccgttt 360


Query: 361 gtatggtcccattaccaaagaatgtcaaatttgaatcaccagcttctgaatcaaatacta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtatggtcccattaccaaagaatgtcaaatttgaatcaccagcttctgaatcaaatacta 420


Query: 421 aaccatcatcaatatttgctccaactgcatttggtggcaatgcaccaccaacaacttcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaccatcatcaatatttgctccaactgcatttggtggcaatgcaccaccaacaacttcaa 480


Query: 481 ctgctgttgactcttctaaattatttggtggtggcggcagtaatactattactttcaacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgctgttgactcttctaaattatttggtggtggcggcagtaatactattactttcaacg 540


Query: 541 caccaactttattcggtaacaataacaatagtaatccatcaaacttatttggcagtggta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caccaactttattcggtaacaataacaatagtaatccatcaaacttatttggcagtggta 600


Query: 601 ataacaattcttcatcactatttggtggcaattcaacaaccatccaaccatcgcaatcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ataacaattcttcatcactatttggtggcaattcaacaaccatccaaccatcgcaatcat 660


Query: 661 tatttggaactaagtcaactgaaaccaaatctgatgacccaatgtcgcttaaagaaatgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tatttggaactaagtcaactgaaaccaaatctgatgacccaatgtcgcttaaagaaatgt 720


Query: 721 caaatacaattcaagataatgatgctcaaaattcagattcagaatcacatgaagaattag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 caaatacaattcaagataatgatgctcaaaattcagattcagaatcacatgaagaattag 780


Query: 781 aatcaggatcagaagaagaagaagaacaacaacaacaaccaaaagttacattgttatcat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aatcaggatcagaagaagaagaagaacaacaacaacaaccaaaagttacattgttatcat 840


Query: 841 cttcatttactcccccatc 859
|||||||||||||||||||
Sbjct: 841 cttcatttactcccccatc 859


Score = 852 bits (430), Expect = 0.0
Identities = 430/430 (100%)
Strand = Plus / Plus


Query: 922 ttgctcctccaaaacctgaaaatacatcaacaccaacatcatcaatctttggatcattta 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 ttgctcctccaaaacctgaaaatacatcaacaccaacatcatcaatctttggatcattta 981


Query: 982 gttctcaaccaagtggtggtggtatttcagcatttggaccagtttctagtaattcatcat 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 gttctcaaccaagtggtggtggtatttcagcatttggaccagtttctagtaattcatcat 1041


Query: 1042 cgtctccatttggaagtgcatttggaagctcattcggttcaacaacaattccatcatttg 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 cgtctccatttggaagtgcatttggaagctcattcggttcaacaacaattccatcatttg 1101


Query: 1102 gacaatctcaagttaatccattaacaatcaatccaacctcaacttctccaacaccagtat 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 gacaatctcaagttaatccattaacaatcaatccaacctcaacttctccaacaccagtat 1161


Query: 1162 ttggaggttcaactacctctcaattctcatcatcatcaccagcaccaattttcggctcaa 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 ttggaggttcaactacctctcaattctcatcatcatcaccagcaccaattttcggctcaa 1221


Query: 1222 ctgcaactattaaaacatttggtgatttatcaaaatcatcctcatcaaataatgaaaata 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1222 ctgcaactattaaaacatttggtgatttatcaaaatcatcctcatcaaataatgaaaata 1281


Query: 1282 aagaccaaccatcatcatcaccttcaaaaccatcaccatcaccatcaaatccaacttttg 1341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 aagaccaaccatcatcatcaccttcaaaaccatcaccatcaccatcaaatccaacttttg 1341


Query: 1342 aatctattaa 1351
||||||||||
Sbjct: 1342 aatctattaa 1351


Score = 525 bits (265), Expect = e-148
Identities = 312/319 (97%)
Strand = Plus / Plus


Query: 1898 ctaaacaatcaattgaatctgaatctgataaaaaagaagatgaaatggaaaaagaatttt 1957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1898 ctaaacaatcaattgaatctgaatctgataaaaaagaagatgaaatggaaaaagaatttt 1957


Query: 1958 caagaattgaagaaactataaaaccaaacnnnnnnncaaccaataaagatgaaaaagatc 2017
||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1958 caagaattgaagaaactataaaaccaaactttttttcaaccaataaagatgaaaaagatc 2017


Query: 2018 aagaaaccaaagaagataatggcaacagtgacaacaacnnnnnnnnnngaaacacaacgg 2077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2018 aagaaaccaaagaagataatggcaacagtgacaacaacnnnnnnnnnngaaacacaacgg 2077


Query: 2078 ccagcacaggaacacaccgacccccaccggaaggcagccggaagccaacggacaaacaac 2137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2078 ccagcacaggaacacaccgacccccaccggaaggcagccggaagccaacggacaaacaac 2137


Query: 2138 gaacccacacgggacaacacaagcgaacccacggacanccaacccaaaccccaacaccac 2197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2138 gaacccacacgggacaacacaagcgaacccacggacanccaacccaaaccccaacaccac 2197


Query: 2198 caacaccagtagttggagg 2216
|||||||||||||||||||
Sbjct: 2198 caacaccagtagttggagg 2216


Score = 383 bits (193), Expect = e-105
Identities = 208/208 (100%)
Strand = Plus / Plus


Query: 2281 aaaacacccggagacctagcaaaaacacccacngcaaataagggggacaaagaccaacca 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 aaaacacccggagacctagcaaaaacacccacngcaaataagggggacaaagaccaacca 2340


Query: 2341 tcatcatcaccatcaccaacaaaaccaacgcctgaatctaccaccaaagaaganaaagct 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 tcatcatcaccatcaccaacaaaaccaacgcctgaatctaccaccaaagaaganaaagct 2400


Query: 2401 gataatgttgaagacaaaaccgacnaaatagaagggnanaaagaagatagtgaagatgag 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 gataatgttgaagacaaaaccgacnaaatagaagggnanaaagaagatagtgaagatgag 2460


Query: 2461 aaagttatcactgaagacacaaataacc 2488
||||||||||||||||||||||||||||
Sbjct: 2461 aaagttatcactgaagacacaaataacc 2488


Score = 77.8 bits (39), Expect = 8e-14
Identities = 39/39 (100%)
Strand = Plus / Plus


Query: 1717 ctttagaagaaaccaaacaatcaattgaatcttgataaa 1755
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1717 ctttagaagaaaccaaacaatcaattgaatcttgataaa 1755


Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Plus


Query: 1609 ctttggaagaaactaaacaatcaattgaatctgat 1643
|||||||||||||||||||||||||||||||||||
Sbjct: 1609 ctttggaagaaactaaacaatcaattgaatctgat 1643


Score = 67.9 bits (34), Expect = 7e-11
Identities = 34/34 (100%)
Strand = Plus / Plus


Query: 1501 cattagaagaaactaaacaatcaattgaatctga 1534
||||||||||||||||||||||||||||||||||
Sbjct: 1501 cattagaagaaactaaacaatcaattgaatctga 1534


Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus


Query: 1505 agaagaaactaaacaatcaattgaatctga 1534
||||||||||||||||||||||||||||||
Sbjct: 1890 agaagaaactaaacaatcaattgaatctga 1919


Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus


Query: 1614 gaagaaactaaacaatcaattgaatctgat 1643
||||||||||||||||||||||||||||||
Sbjct: 1506 gaagaaactaaacaatcaattgaatctgat 1535


Score = 58.0 bits (29), Expect = 7e-08
Identities = 29/29 (100%)
Strand = Plus / Plus


Query: 1614 gaagaaactaaacaatcaattgaatctga 1642
|||||||||||||||||||||||||||||
Sbjct: 1891 gaagaaactaaacaatcaattgaatctga 1919


Score = 58.0 bits (29), Expect = 7e-08
Identities = 29/29 (100%)
Strand = Plus / Plus


Query: 1506 gaagaaactaaacaatcaattgaatctga 1534
|||||||||||||||||||||||||||||
Sbjct: 1614 gaagaaactaaacaatcaattgaatctga 1642


Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus


Query: 1719 ttagaagaaaccaaacaatcaattgaatct 1748
||||||||||| ||||||||||||||||||
Sbjct: 1503 ttagaagaaactaaacaatcaattgaatct 1532


Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus


Query: 1503 ttagaagaaactaaacaatcaattgaatct 1532
||||||||||| ||||||||||||||||||
Sbjct: 1719 ttagaagaaaccaaacaatcaattgaatct 1748


Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus


Query: 1917 tgaatctgataaaaaagaagatgaaa 1942
||||||||||||||||||||||||||
Sbjct: 1634 tgaatctgataaaaaagaagatgaaa 1659


Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Plus


Query: 1609 ctttggaagaaactaaacaatcaattgaatct 1640
|||| |||||||| ||||||||||||||||||
Sbjct: 1717 ctttagaagaaaccaaacaatcaattgaatct 1748


Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Plus


Query: 1717 ctttagaagaaaccaaacaatcaattgaatct 1748
|||| |||||||| ||||||||||||||||||
Sbjct: 1609 ctttggaagaaactaaacaatcaattgaatct 1640


Score = 48.1 bits (24), Expect = 7e-05
Identities = 27/28 (96%)
Strand = Plus / Plus


Query: 1721 agaagaaaccaaacaatcaattgaatct 1748
||||||||| ||||||||||||||||||
Sbjct: 1890 agaagaaactaaacaatcaattgaatct 1917


Score = 46.1 bits (23), Expect = 3e-04
Identities = 38/43 (88%), Gaps = 5/43 (11%)
Strand = Plus / Plus


Query: 1900 aaacaatcaattgaatctgaatctgataaaaaagaagatgaaa 1942
|||||||||||||||||| ||||||||||||||||||||
Sbjct: 1731 aaacaatcaattgaatct-----tgataaaaaagaagatgaaa 1768


Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 1281 aaagaccaaccatcatcatcacc 1303
|||||||||||||||||||||||
Sbjct: 2329 aaagaccaaccatcatcatcacc 2351


Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 2329 aaagaccaaccatcatcatcacc 2351
|||||||||||||||||||||||
Sbjct: 1281 aaagaccaaccatcatcatcacc 1303


Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 1898 ctaaacaatcaattgaatctga 1919
||||||||||||||||||||||
Sbjct: 1621 ctaaacaatcaattgaatctga 1642


Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 1898 ctaaacaatcaattgaatctga 1919
||||||||||||||||||||||
Sbjct: 1513 ctaaacaatcaattgaatctga 1534


Score = 42.1 bits (21), Expect = 0.004
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 1917 tgaatctgataaaaaagaaga 1937
|||||||||||||||||||||
Sbjct: 1526 tgaatctgataaaaaagaaga 1546


Score = 36.2 bits (18), Expect = 0.26
Identities = 24/26 (92%)
Strand = Plus / Plus


Query: 1149 ccaacaccagtatttggaggttcaac 1174
|||||||||||| |||||||| ||||
Sbjct: 2197 ccaacaccagtagttggaggtccaac 2222


Score = 34.2 bits (17), Expect = 1.0
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 2345 catcaccatcaccaacaaaaccaac 2369
|||||||||||||| |||| |||||
Sbjct: 1312 catcaccatcaccatcaaatccaac 1336


Score = 34.2 bits (17), Expect = 1.0
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 1312 catcaccatcaccatcaaatccaac 1336
|||||||||||||| |||| |||||
Sbjct: 2345 catcaccatcaccaacaaaaccaac 2369


Score = 34.2 bits (17), Expect = 1.0
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 1189 catcatcatcaccagcaccaa 1209
|||||||||||||| ||||||
Sbjct: 2339 catcatcatcaccatcaccaa 2359


Score = 34.2 bits (17), Expect = 1.0
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 2339 catcatcatcaccatcaccaa 2359
|||||||||||||| ||||||
Sbjct: 1189 catcatcatcaccagcaccaa 1209


Score = 32.2 bits (16), Expect = 4.1
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 1309 aaccatcaccatcaccatca 1328
|||||||| |||||||||||
Sbjct: 2336 aaccatcatcatcaccatca 2355


Score = 32.2 bits (16), Expect = 4.1
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 2336 aaccatcatcatcaccatca 2355
|||||||| |||||||||||
Sbjct: 1309 aaccatcaccatcaccatca 1328


Score = 32.2 bits (16), Expect = 4.1
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 2197 ccaacaccagtagttggagg 2216
|||||||||||| |||||||
Sbjct: 1149 ccaacaccagtatttggagg 1168


>Contig-U15936-1 (Contig-U15936-1Q) /CSM_Contig/Contig-U15936-1Q.Seq.d
Length = 2161

Score = 672 bits (339), Expect = 0.0
Identities = 342/343 (99%)
Strand = Plus / Plus


Query: 517 gcagtaatactattactttcaacgcaccaactttattcggtaacaataacaatagtaatc 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcagtaatactattactttcaacgcaccaactttattcggtaacaataacaatagtaatc 540


Query: 577 catcaaacttatttggcagtggtaataacaattcttcatcactatttggtggcaattcaa 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 catcaaacttatttggcagtggtaataacaattcttcatcactatttggtggcaattcaa 600


Query: 637 caaccatccaaccatcgcaatcattatttggaactaagtcaactgaaaccaaatctgatg 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caaccatccaaccatcgcaatcattatttggaactaagtcaactgaaaccaaatctgatg 660


Query: 697 acccaatgtcgcttaaagaaatgtcaaatacaattcaagataatgatgctcaaaattcag 756
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 661 acccaatgtcgcttaaagaaatgtcaaatacaattcaagataatgatgatcaaaattcag 720


Query: 757 attcagaatcacatgaagaattagaatcaggatcagaagaagaagaagaacaacaacaac 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 attcagaatcacatgaagaattagaatcaggatcagaagaagaagaagaacaacaacaac 780


Query: 817 aaccaaaagttacattgttatcatcttcatttactcccccatc 859
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aaccaaaagttacattgttatcatcttcatttactcccccatc 823


Score = 412 bits (208), Expect = e-114
Identities = 260/278 (93%)
Strand = Plus / Plus


Query: 1074 ttcggttcaacaacaattccatcatttggacaatctcaagttaatccattaacaatcaat 1133
||||||||| || |||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1083 ttcggttcagcatcaataccatcatttggacaatctcaagttaacccattaacaatcaat 1142


Query: 1134 ccaacctcaacttctccaacaccagtatttggaggttcaactacctctcaattctcatca 1193
||||| ||||||||||||||| | |||||||||||||||||||| |||||||||||||||
Sbjct: 1143 ccaacttcaacttctccaacagccgtatttggaggttcaactacttctcaattctcatca 1202


Query: 1194 tcatcaccagcaccaattttcggctcaactgcaactattaaaacatttggtgatttatca 1253
|||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 1203 tcatcaccagcaccaatttttggttcaactgcaactattaaaacatttggcgatttatcg 1262


Query: 1254 aaatcatcctcatcaaataatgaaaataaagaccaaccatcatcatcaccttcaaaacca 1313
||| |||| | ||||||||||||||||||||||||| | |||||||||| ||||||||||
Sbjct: 1263 aaaccatcnttatcaaataatgaaaataaagaccaaacttcatcatcacnttcaaaacca 1322


Query: 1314 tcaccatcaccatcaaatccaacttttgaatctattaa 1351
||||||||||||||||||||||||||||||||||||||
Sbjct: 1323 tcaccatcaccatcaaatccaacttttgaatctattaa 1360


Score = 246 bits (124), Expect = 1e-64
Identities = 135/138 (97%), Gaps = 3/138 (2%)
Strand = Plus / Plus


Query: 922 ttgctcctccaaaacctgaaaatacatcaacaccaacatcatcaatctttggatcattta 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 ttgctcctccaaaacctgaaaatacatcaacaccaacatcatcaatctttggatcattta 1005


Query: 982 gttctcaaccaagtggtggtggtatttcagcatttggaccagtttctagtaattcatcat 1041
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 gttctcaaccaagtggtggtggtatttcagcatttggaccagtttctagtaattcatca- 1064


Query: 1042 cgtctccatttggaagtg 1059
||||||||||||||||
Sbjct: 1065 --tctccatttggaagtg 1080


Score = 153 bits (77), Expect = 2e-36
Identities = 106/116 (91%), Gaps = 6/116 (5%)
Strand = Plus / Plus


Query: 86 tattactttcaatgcaccaaatatattcggtaacaata------gtaatccatcaaactt 139
|||||||||||| ||||||| | ||||||||||||||| ||||||||||||||||
Sbjct: 491 tattactttcaacgcaccaactttattcggtaacaataacaatagtaatccatcaaactt 550


Query: 140 atttggcagtggtaataacaattcttcatcactatttggtggtaattcaacaacca 195
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 551 atttggcagtggtaataacaattcttcatcactatttggtggcaattcaacaacca 606


Score = 123 bits (62), Expect = 1e-27
Identities = 79/87 (90%)
Strand = Plus / Plus


Query: 1900 aaacaatcaattgaatctgaatctgataaaaaagaagatgaaatggaaaaagaattttca 1959
|||||||||||||||||||||||||||| | |||| ||| ||||||||| |||||||
Sbjct: 1744 aaacaatcaattgaatctgaatctgatananaagangatnnnntggaaaaagtattttca 1803


Query: 1960 agaattgaagaaactataaaaccaaac 1986
|||||||||||||||||||||||||||
Sbjct: 1804 agaattgaagaaactataaaaccaaac 1830


Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Plus


Query: 1609 ctttggaagaaactaaacaatcaattgaatctgat 1643
|||||||||||||||||||||||||||||||||||
Sbjct: 1513 ctttggaagaaactaaacaatcaattgaatctgat 1547


Score = 67.9 bits (34), Expect = 7e-11
Identities = 34/34 (100%)
Strand = Plus / Plus


Query: 1501 cattagaagaaactaaacaatcaattgaatctga 1534
||||||||||||||||||||||||||||||||||
Sbjct: 1940 cattagaagaaactaaacaatcaattgaatctga 1973


Score = 61.9 bits (31), Expect = 5e-09
Identities = 31/31 (100%)
Strand = Plus / Plus


Query: 1717 ctttagaagaaaccaaacaatcaattgaatc 1747
|||||||||||||||||||||||||||||||
Sbjct: 1621 ctttagaagaaaccaaacaatcaattgaatc 1651


Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus


Query: 1614 gaagaaactaaacaatcaattgaatctgat 1643
||||||||||||||||||||||||||||||
Sbjct: 1945 gaagaaactaaacaatcaattgaatctgat 1974


Score = 58.0 bits (29), Expect = 7e-08
Identities = 29/29 (100%)
Strand = Plus / Plus


Query: 1506 gaagaaactaaacaatcaattgaatctga 1534
|||||||||||||||||||||||||||||
Sbjct: 1518 gaagaaactaaacaatcaattgaatctga 1546


Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus


Query: 1717 ctttagaagaaaccaaacaatcaattgaatct 1748
|||||||||||| |||||||||||||||||||
Sbjct: 1730 ctttagaagaaatcaaacaatcaattgaatct 1761


Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus


Query: 1719 ttagaagaaaccaaacaatcaattgaatct 1748
||||||||||| ||||||||||||||||||
Sbjct: 1942 ttagaagaaactaaacaatcaattgaatct 1971


Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus


Query: 1917 tgaatctgataaaaaagaagatgaaa 1942
||||||||||||||||||||||||||
Sbjct: 1538 tgaatctgataaaaaagaagatgaaa 1563


Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus


Query: 1917 tgaatctgataaaaaagaagatgaaa 1942
||||||||||||||||||||||||||
Sbjct: 1965 tgaatctgataaaaaagaagatgaaa 1990


Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus


Query: 1503 ttagaagaaactaaacaatcaattgaatc 1531
||||||||||| |||||||||||||||||
Sbjct: 1623 ttagaagaaaccaaacaatcaattgaatc 1651


Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Plus


Query: 1503 ttagaagaaactaaacaatcaattgaatctga 1534
|||||||||||||||||| |||||||| ||||
Sbjct: 2050 ttagaagaaactaaacaaccaattgaaactga 2081


Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Plus


Query: 1717 ctttagaagaaaccaaacaatcaattgaatct 1748
|||| |||||||| ||||||||||||||||||
Sbjct: 1513 ctttggaagaaactaaacaatcaattgaatct 1544


Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Plus


Query: 1503 ttagaagaaactaaacaatcaattgaatctga 1534
|||||||||| ||||||||||||||||||||
Sbjct: 1732 ttagaagaaatcaaacaatcaattgaatctga 1763


Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Plus


Query: 1609 ctttggaagaaactaaacaatcaattgaatc 1639
|||| |||||||| |||||||||||||||||
Sbjct: 1621 ctttagaagaaaccaaacaatcaattgaatc 1651


Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Plus


Query: 1609 ctttggaagaaactaaacaatcaattgaatctgat 1643
|||| ||||||||||||||| |||||||| |||||
Sbjct: 2048 ctttagaagaaactaaacaaccaattgaaactgat 2082


Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus


Query: 1609 ctttggaagaaactaaacaatcaattgaatctga 1642
|||| ||||||| ||||||||||||||||||||
Sbjct: 1730 ctttagaagaaatcaaacaatcaattgaatctga 1763


Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 1917 tgaatctgataaaaaagaagatgaaa 1942
|||| |||||||||||||||||||||
Sbjct: 2073 tgaaactgataaaaaagaagatgaaa 2098


Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 1898 ctaaacaatcaattgaatctga 1919
||||||||||||||||||||||
Sbjct: 1525 ctaaacaatcaattgaatctga 1546


Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 1898 ctaaacaatcaattgaatctga 1919
||||||||||||||||||||||
Sbjct: 1952 ctaaacaatcaattgaatctga 1973


Score = 42.1 bits (21), Expect = 0.004
Identities = 27/29 (93%)
Strand = Plus / Plus


Query: 1717 ctttagaagaaaccaaacaatcaattgaa 1745
||||||||||||| |||||| ||||||||
Sbjct: 2048 ctttagaagaaactaaacaaccaattgaa 2076


Score = 38.2 bits (19), Expect = 0.066
Identities = 37/43 (86%), Gaps = 5/43 (11%)
Strand = Plus / Plus


Query: 1900 aaacaatcaattgaatctgaatctgataaaaaagaagatgaaa 1942
||||||||||||||||| | |||||||||||||||||||
Sbjct: 1635 aaacaatcaattgaatcgg-----gataaaaaagaagatgaaa 1672


Score = 34.2 bits (17), Expect = 1.0
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 2339 catcatcatcaccatcaccaa 2359
|||||||||||||| ||||||
Sbjct: 1198 catcatcatcaccagcaccaa 1218


Score = 34.2 bits (17), Expect = 1.0
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 2345 catcaccatcaccaacaaaaccaac 2369
|||||||||||||| |||| |||||
Sbjct: 1321 catcaccatcaccatcaaatccaac 1345


Score = 32.2 bits (16), Expect = 4.1
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 2336 aaccatcatcatcaccatca 2355
|||||||| |||||||||||
Sbjct: 1318 aaccatcaccatcaccatca 1337


>Contig-U15158-1 (Contig-U15158-1Q) /CSM_Contig/Contig-U15158-1Q.Seq.d
Length = 774

Score = 61.9 bits (31), Expect = 5e-09
Identities = 61/71 (85%)
Strand = Plus / Plus


Query: 1901 aacaatcaattgaatctgaatctgataaaaaagaagatgaaatggaaaaagaattttcaa 1960
||||||| ||||||||||| |||||||||| |||| |||||||||| | |||||||||
Sbjct: 65 aacaatctattgaatctgagtctgataaaagagaaaatgaaatggaggataaattttcaa 124


Query: 1961 gaattgaagaa 1971
|||||||||
Sbjct: 125 agattgaagaa 135


Score = 48.1 bits (24), Expect = 7e-05
Identities = 50/56 (89%), Gaps = 2/56 (3%)
Strand = Plus / Plus


Query: 1904 aatcaattgaatctgaa-tctgataaaaaagaagat-gaaatggaaaaagaatttt 1957
||||||| ||||||||| ||||||||||||| ||| | |||||||||||||||||
Sbjct: 335 aatcaatcgaatctgaaatctgataaaaaaggagaaagtaatggaaaaagaatttt 390


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 66,376
Number of Sequences: 8402
Number of extensions: 66376
Number of successful extensions: 17257
Number of sequences better than 10.0: 837
length of query: 2570
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2553
effective length of database: 7,932,708
effective search space: 20252203524
effective search space used: 20252203524
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 3.11
Homology vs DNA
Query= Contig-U16080-1 (Contig-U16080-1Q) /CSM_Contig/Contig-U16080-1Q.Seq.d
(2570 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ333867) Dictyostelium discoideum cDNA clone:dda44g07, 5' ... 666 0.0 6
(BJ389898) Dictyostelium discoideum cDNA clone:dds20b14, 5' ... 718 0.0 5
(BJ408775) Dictyostelium discoideum cDNA clone:dds46m22, 3' ... 644 0.0 2
(BJ397610) Dictyostelium discoideum cDNA clone:dds46m22, 5' ... 416 0.0 4
(BJ402100) Dictyostelium discoideum cDNA clone:dds20b14, 3' ... 315 e-155 6
(AU040063) Dictyostelium discoideum slug cDNA, clone SLA341. 333 e-121 2
(BJ369742) Dictyostelium discoideum cDNA clone:ddc51i13, 5' ... 218 e-119 4
(BJ385268) Dictyostelium discoideum cDNA clone:ddc54k09, 3' ... 301 8e-84 4
(AU060305) Dictyostelium discoideum slug cDNA, clone SLJ127. 244 1e-59 1
(AU053842) Dictyostelium discoideum slug cDNA, clone SLJ781. 174 2e-46 2
(AU060456) Dictyostelium discoideum slug cDNA, clone SLJ781. 123 3e-23 1
(BB930356) Trifolium pratense cDNA clone:RCC01987. 44 0.003 3
(BB929152) Trifolium pratense cDNA clone:RCC00516. 44 0.004 3
(BH327522) CH230-174H21.TV CHORI-230 Segment 1 Rattus norveg... 44 0.006 3
(BZ164233) CH230-246O13.TJB CHORI-230 Segment 2 Rattus norve... 40 0.007 3
(CQ346213) Sequence 20307 from Patent WO0157275. 34 0.007 3
(CQ309605) Sequence 20710 from Patent WO0186003. 34 0.007 3
(CQ271971) Sequence 20232 from Patent WO0157277. 34 0.007 3
(CQ234274) Sequence 21113 from Patent WO0157273. 34 0.007 3
(CQ185016) Sequence 16412 from Patent WO0157274. 34 0.007 3
(CQ150932) Sequence 20954 from Patent WO0157276. 34 0.007 3
(CQ112113) Sequence 20972 from Patent WO0157272. 34 0.007 3
(CQ079774) Sequence 15574 from Patent WO0157278. 34 0.007 3
(CQ333548) Sequence 7642 from Patent WO0157275. 34 0.008 3
(CQ297189) Sequence 8294 from Patent WO0186003. 34 0.008 3
(CQ259463) Sequence 7724 from Patent WO0157277. 34 0.008 3
(CQ221368) Sequence 8207 from Patent WO0157273. 34 0.008 3
(CQ175158) Sequence 6554 from Patent WO0157274. 34 0.008 3
(CQ137994) Sequence 8016 from Patent WO0157276. 34 0.008 3
(CQ099062) Sequence 7921 from Patent WO0157272. 34 0.008 3
(CQ070594) Sequence 6394 from Patent WO0157278. 34 0.008 3
(EB324296) CNSN01-F-102315-501 Normalized CNS library (juven... 40 0.011 3
(DQ307242) Penaeus monodon microsatellite 10CG sequence. 44 0.013 2
(L30166) Human STS UT7983, sequence tagged site. 34 0.014 3
(CV413566) RC2-HT0252-271099-017-d11 HT0252 Homo sapiens cDN... 36 0.015 4
(CQ341000) Sequence 15094 from Patent WO0157275. 40 0.017 3
(CQ303669) Sequence 14774 from Patent WO0186003. 40 0.017 3
(CQ266718) Sequence 14979 from Patent WO0157277. 40 0.017 3
(CQ228562) Sequence 15401 from Patent WO0157273. 40 0.017 3
(CQ205183) Sequence 7460 from Patent WO0157271. 40 0.017 3
(CQ180806) Sequence 12202 from Patent WO0157274. 40 0.017 3
(CQ145368) Sequence 15390 from Patent WO0157276. 40 0.017 3
(CQ106714) Sequence 15573 from Patent WO0157272. 40 0.017 3
(CQ075733) Sequence 11533 from Patent WO0157278. 40 0.017 3
(CQ056467) Sequence 7287 from Patent WO0157270. 40 0.017 3
(AG300331) Mus musculus molossinus DNA, clone:MSMg01-079C24.... 44 0.019 3
(CN807759) HDAH10E03.F Leech Haementeria depressa library HD... 38 0.021 3
(ED557291) MUGQ_CH252P134B17T7_CN121_079 CHORI-252 Vervet Mo... 44 0.024 3
(FI177524) MUGQ_CH252P251H04T7_CN507_010 CHORI-252 Vervet Mo... 44 0.027 3
(CQ338942) Sequence 13036 from Patent WO0157275. 44 0.029 2
(CQ301738) Sequence 12843 from Patent WO0186003. 44 0.029 2
(CQ264650) Sequence 12911 from Patent WO0157277. 44 0.029 2
(CQ226508) Sequence 13347 from Patent WO0157273. 44 0.029 2
(CQ203146) Sequence 5423 from Patent WO0157271. 44 0.029 2
(CQ178803) Sequence 10199 from Patent WO0157274. 44 0.029 2
(CQ143311) Sequence 13333 from Patent WO0157276. 44 0.029 2
(CQ104603) Sequence 13462 from Patent WO0157272. 44 0.029 2
(CQ073715) Sequence 9515 from Patent WO0157278. 44 0.029 2
(CQ054473) Sequence 5293 from Patent WO0157270. 44 0.029 2
(BB929383) Trifolium pratense cDNA clone:RCC00809. 44 0.033 3
(BB930777) Trifolium pratense cDNA clone:RCC02481. 44 0.033 3
(BB930324) Trifolium pratense cDNA clone:RCC01938. 44 0.033 3
(BB929141) Trifolium pratense cDNA clone:RCC00504. 44 0.033 3
(AQ171567) HS_3163_B1_C02_MR CIT Approved Human Genomic Sper... 44 0.035 2
(CQ326130) Sequence 224 from Patent WO0157275. 44 0.040 2
(CQ289137) Sequence 242 from Patent WO0186003. 44 0.040 2
(CQ251990) Sequence 251 from Patent WO0157277. 44 0.040 2
(CQ213410) Sequence 249 from Patent WO0157273. 44 0.040 2
(CQ197952) Sequence 229 from Patent WO0157271. 44 0.040 2
(CQ168836) Sequence 230 from Patent WO0157274. 44 0.040 2
(CQ130211) Sequence 233 from Patent WO0157276. 44 0.040 2
(CQ091381) Sequence 240 from Patent WO0157272. 44 0.040 2
(CQ064436) Sequence 236 from Patent WO0157278. 44 0.040 2
(CQ049410) Sequence 230 from Patent WO0157270. 44 0.040 2
(CT582945) Pinus pinaster bud EST. 46 0.046 2
(CE170732) tigr-gss-dog-17000326655266 Dog Library Canis lup... 40 0.049 2
(CF605814) RADIC01_001570 Grape Root pSPORT1 Library Vitis v... 34 0.050 4
(FE139367) LV_HP_RA34N22f Litopenaeus vannamei hepatopancrea... 44 0.051 2
(BB931008) Trifolium pratense cDNA clone:RCC02762. 44 0.052 3
(EF715437) Mus musculus C57BL/6N IST10065A4BBR1 gene trap em... 44 0.052 2
(BH275362) CH230-177P15.TV CHORI-230 Segment 1 Rattus norveg... 44 0.053 2
(AL049708) Human DNA sequence from clone XX-PRYM736A3A on ch... 48 0.054 2
(CE013424) tigr-gss-dog-17000321075157 Dog Library Canis lup... 40 0.054 2
(DY664342) SA_MF_09_G01 SA_MF Senecio aethnensis cDNA 5', mR... 44 0.054 2
(G93166) S209P6268FG7.T0 C3H/HeJ Mus musculus STS genomic, s... 44 0.055 2
(EY364270) CAWZ9239.fwd CAWZ Helobdella robusta Primary Late... 44 0.055 2
(CT120512) Sus scrofa genomic clone PigE-122D21, genomic sur... 38 0.058 3
(CE162627) tigr-gss-dog-17000371439200 Dog Library Canis lup... 44 0.063 2
(AG317772) Mus musculus molossinus DNA, clone:MSMg01-102L05.... 44 0.063 2
(AL184136) Tetraodon nigroviridis genome survey sequence T7 ... 44 0.068 2
(AF046247) AF046247 Mus musculus 129Sv/Ev Mus musculus cDNA ... 40 0.073 3
(ER986607) CMHD-GT_436A1-3 GTL_R1_pNMDi4 Mus musculus cDNA c... 40 0.074 3
(EY388143) CAXA7140.fwd CAXA Helobdella robusta Subtracted L... 44 0.076 2
(GE571430) CCHT558.b1_L19.ab1 CCHT Niger Seed Guizotia abyss... 34 0.077 3
(GE049137) 454GmaGlobSeed791785 Soybean Seeds Containing Glo... 32 0.078 4
(AX647437) Sequence 1629 from Patent EP1270724. 36 0.11 5
(CQ328278) Sequence 2372 from Patent WO0157275. 40 0.11 3
(CQ291161) Sequence 2266 from Patent WO0186003. 40 0.11 3
(CQ254150) Sequence 2411 from Patent WO0157277. 40 0.11 3
(CQ215557) Sequence 2396 from Patent WO0157273. 40 0.11 3
(CQ200076) Sequence 2353 from Patent WO0157271. 40 0.11 3
(CQ170925) Sequence 2321 from Patent WO0157274. 40 0.11 3
(CQ132360) Sequence 2382 from Patent WO0157276. 40 0.11 3
(CQ093586) Sequence 2445 from Patent WO0157272. 40 0.11 3
(CQ066540) Sequence 2340 from Patent WO0157278. 40 0.11 3
(CQ051492) Sequence 2312 from Patent WO0157270. 40 0.11 3
(BQ793870) EST 2808 Veraison Grape berries Lambda Zap II Lib... 34 0.12 4
(BY534383) Mus musculus NOD-derived CD11c +ve dendritic cell... 44 0.13 2
(CE076003) tigr-gss-dog-17000324329877 Dog Library Canis lup... 44 0.13 2
(DH775032) Rattus norvegicus DNA, BAC clone: RNB1-361E21, 3'... 38 0.14 4
(AC176497) Strongylocentrotus purpuratus clone R3-3072G14, W... 40 0.15 6
(DW543533) EST_ssal_rgb2_7952 rgb2 Salmo salar cDNA clone ss... 36 0.16 3
(AC011152) Homo sapiens clone RP11-7H4, WORKING DRAFT SEQUEN... 44 0.17 2
(EJ181630) 1092344127358 Global-Ocean-Sampling_GS-27-01-01-1... 44 0.17 2
(BZ229613) CH230-305D20.TJ CHORI-230 Segment 2 Rattus norveg... 44 0.18 2
(EY307847) CAWX20698.rev CAWX Helobdella robusta Primary Ear... 34 0.19 3
(AY325245) Rattus norvegicus Cc2-5 mRNA, complete cds. 44 0.19 2
(DR383963) 11441399 CERES-AN65 Arabidopsis thaliana cDNA clo... 34 0.20 3
(CR163825) Reverse strand read from insert in 5'HPRT inserti... 36 0.20 3
(EY303520) CAWX16757.rev CAWX Helobdella robusta Primary Ear... 44 0.20 2
(BB086955) Mus musculus 12 days embryo embryonic body betwee... 44 0.21 2
(AY753023) Penaeus monodon clone t2801 microsatellite sequence. 44 0.21 2
(EY303521) CAWX16757.fwd CAWX Helobdella robusta Primary Ear... 44 0.21 2
(CE290415) tigr-gss-dog-17000333845940 Dog Library Canis lup... 36 0.21 3
(AP001470) Homo sapiens genomic DNA, chromosome 21 clone:PCR... 44 0.21 2
(BB101504) Mus musculus 12 days embryo embryonic body betwee... 44 0.21 2
(FC843034) CBHN2333.fwd CBHN Metridium senile tentacle Metri... 42 0.22 2
(EY296273) CAWX12715.rev CAWX Helobdella robusta Primary Ear... 34 0.22 3
(DH633832) Rattus norvegicus DNA, BAC clone: RNB1-170P01, 3'... 44 0.22 2
(FF611839) G825P5162RH12.T0 Acorn worm normalized gastrula p... 38 0.22 3
(GE605799) CCPX2877.b1_J23.ab1 CCP(UWX) Globe Artichoke Cyna... 46 0.23 2
(DT265028) JGI_CAAU13438.fwd CAAU Pimephales promelas brain ... 40 0.24 2
(EY309749) CAWX21767.rev CAWX Helobdella robusta Primary Ear... 44 0.24 2
(AZ608659) 1M0433G04F Mouse 10kb plasmid UUGC1M library Mus ... 36 0.25 3
(EL487529) CHUS2751.b1_M15.ab1 CHU(LMS) puzzle sunflower Hel... 34 0.25 3
(EY309750) CAWX21767.fwd CAWX Helobdella robusta Primary Ear... 44 0.25 2
(EB555841) AGENCOURT_51803401 D. virilis EST Drosophila viri... 38 0.25 3
(AC141176) Rattus norvegicus clone CH230-428G14, WORKING DRA... 48 0.25 4
(AB030033) Dictyostelium discoideum gene for AmiB, complete ... 32 0.26 6
(DT299974) JGI_CAAW10064.fwd CAAW Pimephales promelas testis... 40 0.26 2
(AG988822) Hemicentrotus pulcherrimus BAC clone: BUB1-12F09_... 44 0.27 2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 44 0.27 14
(FD716105) CAAA2012.rev CAAA Petromyzon marinus Petromyzon m... 48 0.27 4
(GE606498) CCPX3593.b1_B11.ab1 CCP(UWX) Globe Artichoke Cyna... 46 0.27 2
(GD681757) 454GmaGlobSeed424406 Soybean Seeds Containing Glo... 32 0.28 4
(BZ190079) CH230-278P4.TV CHORI-230 Segment 2 Rattus norvegi... 38 0.29 3
(DU237878) 1098574152823 CHORI-243 Ovis aries genomic clone ... 40 0.29 2
(EY327203) CAWY12459.fwd CAWY Helobdella robusta Subtracted ... 40 0.30 3
(EY312663) CAWX24138.rev CAWX Helobdella robusta Primary Ear... 34 0.31 3
(EV486215) 095G10 Cotton Lambda Zap Express Library Gossypiu... 38 0.31 2
(EK766629) 1093017103857 Global-Ocean-Sampling_GS-33-01-01-1... 38 0.32 2
(BZ253576) CH230-499H15.TJ CHORI-230 Segment 2 Rattus norveg... 44 0.34 2
(FM172656) Oryzias latipes EST, clone M074--C11_091. 38 0.36 3
(EY337829) CAWY8594.fwd CAWY Helobdella robusta Subtracted E... 34 0.36 3
(AK155141) Mus musculus NOD-derived CD11c +ve dendritic cell... 44 0.36 2
(CC586704) CH240_384I7.T7 CHORI-240 Bos taurus genomic clone... 40 0.37 3
(AY143618) Amphipholis squamata clone AI1 microsatellite seq... 34 0.39 3
(AC177620) Strongylocentrotus purpuratus clone R3-1020P15, W... 42 0.42 6
(AC125255) Mus musculus chromosome 5, clone RP24-332C17, com... 50 0.42 1
(CR933104) Medicago truncatula chromosome 5 clone mth2-25b3,... 50 0.42 1
(AC128389) Rattus norvegicus clone CH230-137B13, WORKING DRA... 50 0.42 1
(AC107438) Rattus norvegicus clone CH230-160A14, *** SEQUENC... 50 0.42 1
(AC178616) Strongylocentrotus purpuratus clone R3-3021F5, WO... 50 0.42 1
(AC178282) Strongylocentrotus purpuratus clone R3-3093O17, W... 50 0.42 1
(AC176659) Strongylocentrotus purpuratus clone R3-3084G5, WO... 50 0.42 1
(EE441299) 6ETGS6H_UP_026_E10_04FEB2005_072 Brassica napus 6... 50 0.42 1
(DW068258) CLLY8022.b1_L14.ab1 CLL(XYZ) lettuce saligna Lact... 50 0.42 1
(FE488829) CAOT3175.fwd CAOT Selaginella moellendorffii mixe... 50 0.42 1
(FE484536) CAOT10071.rev CAOT Selaginella moellendorffii mix... 50 0.42 1
(FE442898) CAOS10729.rev CAOS Selaginella moellendorffii mix... 50 0.42 1
(FE438093) CAOP7839.rev CAOP Selaginella moellendorffii mixe... 50 0.42 1
(FE437660) CAOP7593.fwd CAOP Selaginella moellendorffii mixe... 50 0.42 1
(FE437659) CAOP7593.rev CAOP Selaginella moellendorffii mixe... 50 0.42 1
(EY147958) CBTN11047.g1_N02.ab1:P Triphysaria pusilla root t... 50 0.42 1
(EV159632) 0083494 Brassica napus Bud library Brassica napus... 50 0.42 1
(BF910948) CM1-UT0039-041100-436-e11 UT0039 Homo sapiens cDN... 34 0.43 3
(EA117033) Sequence 1217 from patent US 7205146. 40 0.45 2
(EB908803) 9179489 ZF31 Danio rerio cDNA clone 3255587, mRNA... 44 0.46 2
(BH501561) BOGOS73TR BOGO Brassica oleracea genomic clone BO... 40 0.47 2
(AC196636) Homo sapiens chromosome 19 PCR product, complete ... 44 0.48 2
(BI045684) MR3-FN0206-300101-004-h10 FN0206 Homo sapiens cDN... 38 0.48 2
(CB706639) AMGNNUC:SRPB2-00154-A2-A srpb2 (10220) Rattus nor... 44 0.48 2
(EC384037) PMAH-aaa91f02.g1 Lamprey_EST_Olfactory Petromyzon... 36 0.49 3
(DK283386) Drosophila auraria mRNA, adult full-length cDNA c... 46 0.51 2
(DY799840) PMAL-aaa92e11.g1 Lamprey_EST_Tissues Petromyzon m... 44 0.53 2
(CD310595) StrPu691.003959 Sea urchin larva cDNA library MPM... 36 0.53 3
(CU137653) Human DNA sequence from clone XX-C0511C0695L on c... 38 0.53 4
(BT012284) Arabidopsis thaliana At3g26932 gene, complete cds. 34 0.54 3
(CQ326669) Sequence 763 from Patent WO0157275. 44 0.56 2
(CQ289698) Sequence 803 from Patent WO0186003. 44 0.56 2
(CQ252552) Sequence 813 from Patent WO0157277. 44 0.56 2
(CQ213968) Sequence 807 from Patent WO0157273. 44 0.56 2
(CQ198504) Sequence 781 from Patent WO0157271. 44 0.56 2
(CQ169368) Sequence 764 from Patent WO0157274. 44 0.56 2
(CQ130759) Sequence 781 from Patent WO0157276. 44 0.56 2
(CQ091943) Sequence 802 from Patent WO0157272. 44 0.56 2
(CQ064990) Sequence 790 from Patent WO0157278. 44 0.56 2
(CQ049952) Sequence 772 from Patent WO0157270. 44 0.56 2
(BF566802) UI-R-BJ0p-afm-d-10-0-UI.r1 UI-R-BJ0p Rattus norve... 40 0.57 2
(EE062925) C1G04719 Mixture of buds, little clusters and fru... 32 0.60 4
(DW405368) ES-N-S03-0263-W Penaeus monodon Eyestalk cDNA lib... 40 0.61 2
(EF207620) Excirolana hirsuticauda clone Ehir7 microsatellit... 44 0.63 2
(CD314803) StrPu621.005167 Sea urchin unfertilised egg cDNA ... 40 0.63 2
(CQ300108) Sequence 11213 from Patent WO0186003. 44 0.64 3
(CQ263075) Sequence 11336 from Patent WO0157277. 44 0.64 3
(CQ177361) Sequence 8757 from Patent WO0157274. 44 0.64 3
(CQ102890) Sequence 11749 from Patent WO0157272. 44 0.64 3
(CQ072197) Sequence 7997 from Patent WO0157278. 44 0.64 3
(AY753053) Penaeus monodon clone zt113 microsatellite sequence. 44 0.64 2
(EE274993) PMAO-aac77d06.g1 Lamprey_EST_Embryo Petromyzon ma... 44 0.67 2
(BY529665) Mus musculus NOD-derived CD11c +ve dendritic cell... 44 0.68 2
(CQ342731) Sequence 16825 from Patent WO0157275. 40 0.70 2
(CQ305543) Sequence 16648 from Patent WO0186003. 40 0.70 2
(CQ268507) Sequence 16768 from Patent WO0157277. 40 0.70 2
(CQ230373) Sequence 17212 from Patent WO0157273. 40 0.70 2
(CQ206930) Sequence 9207 from Patent WO0157271. 40 0.70 2
(CQ182522) Sequence 13918 from Patent WO0157274. 40 0.70 2
(CQ147139) Sequence 17161 from Patent WO0157276. 40 0.70 2
(CQ108507) Sequence 17366 from Patent WO0157272. 40 0.70 2
(CQ077489) Sequence 13289 from Patent WO0157278. 40 0.70 2
(CQ058163) Sequence 8983 from Patent WO0157270. 40 0.70 2
(AY232267) Dictyostelium discoideum putative protein Roco5 (... 32 0.70 6
(FD719326) CAAA3924.fwd CAAA Petromyzon marinus Petromyzon m... 44 0.71 2
(DH819890) Rattus norvegicus DNA, BAC clone: RNB1-423F22, 5'... 40 0.72 2
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 34 0.73 10
(ET449609) fcg2x.pk193.d8 C. graminicola genomic sequence Gl... 40 0.73 2
(DQ471453) Takifugu rubripes immunoglobulin light chain T2a ... 40 0.74 3
(BH111301) RPCI-24-340J13.TV RPCI-24 Mus musculus genomic cl... 38 0.74 2
(BZ241111) CH230-324L22.TV CHORI-230 Segment 2 Rattus norveg... 44 0.75 2
(AC171134) Helobdella robusta clone CH306-1A5, complete sequ... 38 0.75 7
(BV311286) S236P6244FA8.T0 AlaskanMalamute Canis familiaris ... 36 0.76 3
(DH521845) Rattus norvegicus DNA, BAC clone: RNB1-019I20, 5'... 34 0.78 3
(BE067327) PM1-BT0350-281299-002-b07 BT0350 Homo sapiens cDN... 36 0.80 2
(DH514353) Rattus norvegicus DNA, BAC clone: RNB1-009I02, 3'... 40 0.83 2
(DH686092) Rattus norvegicus DNA, BAC clone: RNB1-241C03, 3'... 40 0.85 2
(DH446993) Macropus eugenii DNA with T3 primer, fosmid clone... 44 0.86 2
(DH544630) Rattus norvegicus DNA, BAC clone: RNB1-050L03, 5'... 40 0.87 2
(DH801469) Rattus norvegicus DNA, BAC clone: RNB1-397C03, 5'... 40 0.88 2
(AK035038) Mus musculus 12 days embryo embryonic body betwee... 44 0.88 2
(AK034558) Mus musculus 12 days embryo embryonic body betwee... 44 0.88 2
(AG337749) Mus musculus molossinus DNA, clone:MSMg01-129N13.... 36 0.88 3
(BK001933) TPA_inf: Drosophila melanogaster HDC08426 (HDC084... 40 0.91 2
(FC844712) CBHN3277.fwd CBHN Metridium senile tentacle Metri... 40 0.91 2
(AY209187) Trypanosoma cruzi RNA-binding protein 6 (rbp-6) m... 40 0.91 3
(ET589192) fcg3x.307650j23.f C. graminicola genomic sequence... 40 0.92 2
(EY336470) CAWY7703.fwd CAWY Helobdella robusta Subtracted E... 36 0.93 3
(ER110930) 1095521942354 Global-Ocean-Sampling_GS-33-01-01-1... 40 0.95 2
(DE926834) Macropus eugenii DNA, BAC clone: MEB1-116B15_F, 5... 40 0.97 2
(AK222128) Arabidopsis thaliana mRNA for putative protein, c... 34 0.98 3
(DE894236) Macropus eugenii DNA, BAC clone: MEB1-072A13_F, 5... 40 0.98 2
(BH476628) BOGQW24TF BOGQ Brassica oleracea genomic clone BO... 40 0.99 2
(AZ558244) RPCI-23-218G20.TV RPCI-23 Mus musculus genomic cl... 40 1.0 2
(CO543556) LyEST11171 Sea lamprey LyEST Petromyzon marinus c... 46 1.0 2
(AK035842) Mus musculus 16 days neonate cerebellum cDNA, RIK... 44 1.0 2
(BF753619) CM1-CT0039-031000-451-h08 CT0039 Homo sapiens cDN... 34 1.0 3
(EY339002) CAWY9397.fwd CAWY Helobdella robusta Subtracted E... 36 1.0 3
(CT164674) Sus scrofa genomic clone CH242-125A23, genomic su... 38 1.0 2
(DH114075) Oryzias latipes Fosmid clone:GOLWFno374_i07, forw... 40 1.1 2
(EY359984) CAWZ6793.fwd CAWZ Helobdella robusta Primary Late... 38 1.1 3
(CR343587) mte1-76F24RM1 BAC end, cultivar Jemalong A17 of M... 40 1.1 3
(AJ463497) Hordeum vulgare EST clone S0000200037B08F1. 36 1.1 2
(AJ460531) Hordeum vulgare EST clone S0000200052C01F1. 36 1.1 2
(EY369331) CAXA12303.fwd CAXA Helobdella robusta Subtracted ... 38 1.2 3
(AU060639) Dictyostelium discoideum slug cDNA, clone SLK715. 40 1.2 3
(AP006547) Homo sapiens genomic DNA, chromosome 8q23, clone:... 44 1.2 2
(CQ339122) Sequence 13216 from Patent WO0157275. 40 1.2 2
(CQ301927) Sequence 13032 from Patent WO0186003. 40 1.2 2
(CQ264838) Sequence 13099 from Patent WO0157277. 40 1.2 2
(CQ226696) Sequence 13535 from Patent WO0157273. 40 1.2 2
(CQ203331) Sequence 5608 from Patent WO0157271. 40 1.2 2
(CQ178982) Sequence 10378 from Patent WO0157274. 40 1.2 2
(CQ143492) Sequence 13514 from Patent WO0157276. 40 1.2 2
(CQ104790) Sequence 13649 from Patent WO0157272. 40 1.2 2
(CQ073900) Sequence 9700 from Patent WO0157278. 40 1.2 2
(CQ054655) Sequence 5475 from Patent WO0157270. 40 1.2 2
(AL185394) Tetraodon nigroviridis genome survey sequence PUC... 40 1.2 2
(AX647377) Sequence 1569 from Patent EP1270724. 44 1.3 3
(EY389198) CAXA7719.fwd CAXA Helobdella robusta Subtracted L... 38 1.3 3
(CQ340101) Sequence 14195 from Patent WO0157275. 40 1.4 2
(CQ302920) Sequence 14025 from Patent WO0186003. 40 1.4 2
(CQ265844) Sequence 14105 from Patent WO0157277. 40 1.4 2
(CQ227675) Sequence 14514 from Patent WO0157273. 40 1.4 2
(CQ204326) Sequence 6603 from Patent WO0157271. 40 1.4 2
(CQ179957) Sequence 11353 from Patent WO0157274. 40 1.4 2
(CQ144471) Sequence 14493 from Patent WO0157276. 40 1.4 2
(CQ105786) Sequence 14645 from Patent WO0157272. 40 1.4 2
(CQ074873) Sequence 10673 from Patent WO0157278. 40 1.4 2
(CQ055613) Sequence 6433 from Patent WO0157270. 40 1.4 2
(EY369824) CAXA1257.fwd CAXA Helobdella robusta Subtracted L... 38 1.4 3
(EY389250) CAXA7747.fwd CAXA Helobdella robusta Subtracted L... 38 1.5 3
(AL233375) Tetraodon nigroviridis genome survey sequence T7 ... 42 1.5 3
(BH303057) CH230-36P14.TJ CHORI-230 Segment 1 Rattus norvegi... 38 1.5 2
(DW618107) CLJ302-E04.x1d-t SHGC-CLJ2 Gasterosteus aculeatus... 40 1.5 3
(AZ196050) SP_1031_A2_E05_SP6E Strongylocentrotus purpuratus... 34 1.5 4
(AU060595) Dictyostelium discoideum slug cDNA, clone SLK568. 40 1.5 3
(BH276418) CH230-178C15.TJ CHORI-230 Segment 1 Rattus norveg... 38 1.5 2
(BB930817) Trifolium pratense cDNA clone:RCC02532. 44 1.6 2
(CV462441) Lr_JV2CF_45G05_SKplus Juvenile Earthworm Library ... 38 1.6 3
(BQ665129) HX02D17u HX Hordeum vulgare subsp. vulgare cDNA c... 36 1.6 2
(AC136285) Homo sapiens chromosome 16 clone RP11-899L11, com... 40 1.7 4
(AL691461) Mouse DNA sequence from clone RP23-162E10 on chro... 48 1.7 1
(AC200467) Rhesus Macaque BAC CH250-310K20 () complete sequ... 48 1.7 1
(AP004984) Lotus japonicus genomic DNA, chromosome 1, clone:... 48 1.7 1
(AL513463) Neurospora crassa DNA linkage group V Cosmid cont... 48 1.7 1
(Z97192) Human DNA sequence from clone RP1-29C18 on chromoso... 48 1.7 1
(AL031055) Human DNA sequence from clone RP1-28H20 on chromo... 48 1.7 1
(AC140769) Rattus norvegicus clone CH230-77O18, *** SEQUENCI... 48 1.7 1
(AC133991) Rattus norvegicus clone CH230-17F14, *** SEQUENCI... 48 1.7 1
(AC127109) Rattus norvegicus clone CH230-242F21, WORKING DRA... 48 1.7 1
(AC125986) Rattus norvegicus clone CH230-3K20, WORKING DRAFT... 48 1.7 1
(AC125929) Rattus norvegicus clone CH230-118D11, *** SEQUENC... 48 1.7 1
(AC115181) Rattus norvegicus clone CH230-106B6, WORKING DRAF... 48 1.7 1
(AC113218) Rattus norvegicus clone CH230-354G24, WORKING DRA... 48 1.7 1
(AC111901) Rattus norvegicus clone CH230-65B24, WORKING DRAF... 48 1.7 1
(AC094796) Rattus norvegicus clone CH230-4N17, WORKING DRAFT... 48 1.7 1
(CU861652) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 1.7 1
(AL669909) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 48 1.7 1
(AC188220) Callithrix jacchus clone CH259-80M8, WORKING DRAF... 48 1.7 1
(AC025598) Homo sapiens chromosome 2 clone RP11-747D16 map 2... 48 1.7 1
(AC024966) Mus musculus chromosome 11 clone RP23-328K9 map 1... 48 1.7 1
(AY810137) Schistosoma japonicum SJCHGC05035 protein mRNA, p... 48 1.7 1
(FH903529) CHO_ONF015xp06f1.ab1 CHO_ONF Nicotiana tabacum ge... 48 1.7 1
(DT242391) JGI_CAAT12484.fwd CAAT Pimephales promelas brain ... 48 1.7 1
(DB623265) Halocynthia roretzi cDNA clone:mae36o22, 3' end. 48 1.7 1
(DB606864) Halocynthia roretzi cDNA clone:mae7d22, 5' end. 48 1.7 1
(DB601080) Halocynthia roretzi cDNA clone:ma329f04, 3' end. 48 1.7 1
(BU778777) SJEEGH05 SJE Schistosoma japonicum cDNA, mRNA seq... 48 1.7 1
(BU774481) SJEAFE01 SJE Schistosoma japonicum cDNA, mRNA seq... 48 1.7 1
(AC120785) Mus musculus chromosome 8, clone RP23-336P3, comp... 44 1.7 4
(AC100804) Homo sapiens chromosome 8, clone CTD-3119E5, comp... 44 1.7 4
(DK276594) Drosophila auraria mRNA, adult full-length cDNA c... 44 1.7 2
(CN807714) HDAH03A02.F Leech Haementeria depressa library HD... 44 1.8 2
(BM100421) EBma01_SQ005_C19_R maternal, 4 DPA, no treatment,... 36 1.9 2
(AJ477986) Hordeum vulgare EST clone S0001000056K03F1. 36 1.9 2
(EG964077) AU_Ich_001A_G11 Whole organism normalized cDNA li... 38 2.0 2
(CR313616) mte1-36B10RM1 BAC end, cultivar Jemalong A17 of M... 36 2.1 3
(DJ471693) Method for analysing genome using microsatellite ... 38 2.1 2
(CQ327354) Sequence 1448 from Patent WO0157275. 40 2.1 2
(CQ290388) Sequence 1493 from Patent WO0186003. 40 2.1 2
(CQ253252) Sequence 1513 from Patent WO0157277. 40 2.1 2
(CQ214644) Sequence 1483 from Patent WO0157273. 40 2.1 2
(CQ199199) Sequence 1476 from Patent WO0157271. 40 2.1 2
(CQ170052) Sequence 1448 from Patent WO0157274. 40 2.1 2
(CQ131438) Sequence 1460 from Patent WO0157276. 40 2.1 2
(CQ092633) Sequence 1492 from Patent WO0157272. 40 2.1 2
(CQ065660) Sequence 1460 from Patent WO0157278. 40 2.1 2
(CQ050616) Sequence 1436 from Patent WO0157270. 40 2.1 2
(BF815007) RC6-CI0190-301100-011-D09 CI0190 Homo sapiens cDN... 36 2.1 3
(FL641392) TS04-B2 Reticulitermes flavipes symbiont library ... 38 2.1 2
(AC020134) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 40 2.1 3
(CQ342489) Sequence 16583 from Patent WO0157275. 34 2.2 3
(CQ305288) Sequence 16393 from Patent WO0186003. 34 2.2 3
(CQ268254) Sequence 16515 from Patent WO0157277. 34 2.2 3
(CQ230106) Sequence 16945 from Patent WO0157273. 34 2.2 3
(CQ206688) Sequence 8965 from Patent WO0157271. 34 2.2 3
(CQ182292) Sequence 13688 from Patent WO0157274. 34 2.2 3
(CQ146881) Sequence 16903 from Patent WO0157276. 34 2.2 3
(CQ108252) Sequence 17111 from Patent WO0157272. 34 2.2 3
(CQ077251) Sequence 13051 from Patent WO0157278. 34 2.2 3
(CQ057943) Sequence 8763 from Patent WO0157270. 34 2.2 3
(EI203873) MUGQ_CH252P196O23T7_CN303_082 CHORI-252 Vervet Mo... 38 2.2 2
(AJ469046) Hordeum vulgare EST clone S0000800201F02F1. 36 2.2 2
(CQ329987) Sequence 4081 from Patent WO0157275. 40 2.2 2
(CQ293013) Sequence 4118 from Patent WO0186003. 40 2.2 2
(CQ255916) Sequence 4177 from Patent WO0157277. 40 2.2 2
(CQ217353) Sequence 4192 from Patent WO0157273. 40 2.2 2
(CQ201800) Sequence 4077 from Patent WO0157271. 40 2.2 2
(CQ172616) Sequence 4012 from Patent WO0157274. 40 2.2 2
(CQ134106) Sequence 4128 from Patent WO0157276. 40 2.2 2
(CQ095358) Sequence 4217 from Patent WO0157272. 40 2.2 2
(CQ068279) Sequence 4079 from Patent WO0157278. 40 2.2 2
(CQ053165) Sequence 3985 from Patent WO0157270. 40 2.2 2
(AZ725535) RPCI-24-113B23.TJ RPCI-24 Mus musculus genomic cl... 36 2.2 3
(AX647633) Sequence 1825 from Patent EP1270724. 40 2.2 3
(BJ361114) Dictyostelium discoideum cDNA clone:ddc9l23, 5' e... 38 2.2 3
(CO865035) LM_SM5_005969 Locusta migratoria solitarious phas... 44 2.3 2
(CK567819) HO08A05w HO Hordeum vulgare cDNA clone HO08A05 3-... 36 2.3 2
(BF910950) CM1-UT0039-041100-436-g11 UT0039 Homo sapiens cDN... 32 2.3 3
(AL783698) Xenopus tropicalis EST, clone TNeu066k14 5'. 40 2.4 2
(FD032374) CBCZ4473.b1 CBCZ: cDNA library made from Channel ... 44 2.5 2
(AC180540) Strongylocentrotus purpuratus clone R3-3098M2, WO... 44 2.5 5
(BG639745) SD05368.3prime SD Drosophila melanogaster Schneid... 40 2.5 2
(BJ427165) Dictyostelium discoideum cDNA clone:ddv61c14, 5' ... 38 2.5 3
(BQ764671) EBca01_SQ004_F16_R carpel, pre-anthesis, no treat... 36 2.6 2
(AZ093214) RPCI-23-445M10.TV RPCI-23 Mus musculus genomic cl... 40 2.6 2
(AZ725604) RPCI-24-113C23.TJ RPCI-24 Mus musculus genomic cl... 36 2.6 3
(BU982063) HA25G17r HA Hordeum vulgare subsp. vulgare cDNA c... 36 2.7 2
(DQ471454) Takifugu rubripes immunoglobulin light chain T2b ... 40 2.8 3
(CR251565) Reverse strand read from insert in 5'HPRT inserti... 38 2.9 2
(AZ371035) 1M0122I24F Mouse 10kb plasmid UUGC1M library Mus ... 38 2.9 2
(ED706965) GM_WBb0052E18.r GM_WBb Glycine max genomic clone ... 40 2.9 2
(CQ344623) Sequence 18717 from Patent WO0157275. 40 2.9 2
(CQ307782) Sequence 18887 from Patent WO0186003. 40 2.9 2
(CQ270525) Sequence 18786 from Patent WO0157277. 40 2.9 2
(CQ232470) Sequence 19309 from Patent WO0157273. 40 2.9 2
(CQ184184) Sequence 15580 from Patent WO0157274. 40 2.9 2
(CQ149194) Sequence 19216 from Patent WO0157276. 40 2.9 2
(CQ110466) Sequence 19325 from Patent WO0157272. 40 2.9 2
(CQ079091) Sequence 14891 from Patent WO0157278. 40 2.9 2
(EY481894) CBBP12023.fwd CBBP Hirudo medicinalis hermaphrodi... 42 2.9 2
(CQ341417) Sequence 15511 from Patent WO0157275. 40 2.9 2
(CQ304146) Sequence 15251 from Patent WO0186003. 40 2.9 2
(CQ267120) Sequence 15381 from Patent WO0157277. 40 2.9 2
(CQ229000) Sequence 15839 from Patent WO0157273. 40 2.9 2
(CQ205581) Sequence 7858 from Patent WO0157271. 40 2.9 2
(CQ181238) Sequence 12634 from Patent WO0157274. 40 2.9 2
(CQ145785) Sequence 15807 from Patent WO0157276. 40 2.9 2
(CQ107119) Sequence 15978 from Patent WO0157272. 40 2.9 2
(CQ076134) Sequence 11934 from Patent WO0157278. 40 2.9 2
(CQ056868) Sequence 7688 from Patent WO0157270. 40 2.9 2
(AC184435) Strongylocentrotus purpuratus clone R3-3094B2, WO... 44 2.9 6
(EY337929) CAWY8665.rev CAWY Helobdella robusta Subtracted E... 36 3.0 3
(EI709831) IGBR11H01TR BAC library from the recurrent gliobl... 40 3.0 2
(BI955438) HVSMEm0023C05f Hordeum vulgare green seedling EST... 36 3.0 2
(EY514021) CAPF11691.fwd CAPF Capitella sp. I ECS-2004 whole... 44 3.1 2
(DH828766) Rattus norvegicus DNA, BAC clone: RNB1-435F13, 3'... 40 3.1 2
(AG300329) Mus musculus molossinus DNA, clone:MSMg01-079C23.... 36 3.1 3
(EY373880) CAXA14789.rev CAXA Helobdella robusta Subtracted ... 34 3.1 3
(AL178892) Tetraodon nigroviridis genome survey sequence PUC... 44 3.1 2
(AZ359307) 1M0102O06F Mouse 10kb plasmid UUGC1M library Mus ... 38 3.1 2
(AM522569) Paracentrotus lividus EST, clone MPMGp1171G0221Q,... 42 3.2 2
(EY940491) RS2E747TF RS2(RS) Raphanus sativus cDNA 5', mRNA ... 38 3.2 2
(FD857840) CBHA7143.rev CBHA Volvox carteri f. nagariensis i... 42 3.2 2
(FD844573) CBHA12067.rev CBHA Volvox carteri f. nagariensis ... 42 3.2 2
(FD857841) CBHA7143.fwd CBHA Volvox carteri f. nagariensis i... 42 3.2 2
(FD844574) CBHA12067.fwd CBHA Volvox carteri f. nagariensis ... 42 3.2 2
(FD840241) CBGZ8487.fwd CBGZ Volvox carteri f. nagariensis i... 42 3.2 2
(AG362775) Mus musculus molossinus DNA, clone:MSMg01-164D18.... 42 3.3 2
(FD916367) CBOX19213.fwd CBOX Volvox carteri f. nagariensis ... 42 3.3 2
(DH660811) Rattus norvegicus DNA, BAC clone: RNB1-207D07, 3'... 44 3.3 2
(AC181363) Strongylocentrotus purpuratus clone R3-112K1, WOR... 34 3.3 2
(AC179294) Strongylocentrotus purpuratus clone R3-1105F19, W... 36 3.3 2
(DH713936) Rattus norvegicus DNA, BAC clone: RNB1-278L18, 5'... 42 3.3 2
(FD809935) CBGZ1482.rev CBGZ Volvox carteri f. nagariensis i... 42 3.3 2
(AC158552) Mus musculus chromosome 3, clone RP23-97D22, comp... 44 3.3 3
(FD926076) CBOX602.rev CBOX Volvox carteri f. nagariensis in... 42 3.4 2
(BZ158473) CH230-301K11.TJ CHORI-230 Segment 2 Rattus norveg... 36 3.4 2
(AL079301) Human DNA sequence from clone RP4-753M9 on chromo... 44 3.4 2
(FD914187) CBOX18045.fwd CBOX Volvox carteri f. nagariensis ... 42 3.4 2
(BX012809) Single read from an extremity of a full-length cD... 44 3.4 2
(FD908265) CBOX14706.fwd CBOX Volvox carteri f. nagariensis ... 42 3.4 2
(FD820799) CBGZ21508.rev CBGZ Volvox carteri f. nagariensis ... 42 3.4 2
(BX322573) Human DNA sequence from clone RP11-343N7 on chrom... 36 3.4 2
(FD916366) CBOX19213.rev CBOX Volvox carteri f. nagariensis ... 42 3.4 2
(DH542813) Rattus norvegicus DNA, BAC clone: RNB1-048D06, 3'... 40 3.4 2
(FD908264) CBOX14706.rev CBOX Volvox carteri f. nagariensis ... 42 3.4 2
(AC141387) Rattus norvegicus clone CH230-228E17, WORKING DRA... 40 3.4 4
(AG557428) Mus musculus molossinus DNA, clone:MSMg01-475K10.... 36 3.4 3
(FD857258) CBHA6834.rev CBHA Volvox carteri f. nagariensis i... 42 3.4 2
(BG300530) HVSMEb0017G03f Hordeum vulgare seedling shoot EST... 36 3.5 2
(AG982655) Hemicentrotus pulcherrimus BAC clone: BUB1-03B09_... 44 3.5 2
(CO545658) LyEST1456 Sea lamprey LyEST Petromyzon marinus cD... 46 3.5 2
(FD857259) CBHA6834.fwd CBHA Volvox carteri f. nagariensis i... 42 3.5 2
(CR203046) Reverse strand read from insert in 5'HPRT inserti... 38 3.6 2
(CQ343826) Sequence 17920 from Patent WO0157275. 40 3.6 2
(CQ306918) Sequence 18023 from Patent WO0186003. 40 3.6 2
(CQ269782) Sequence 18043 from Patent WO0157277. 40 3.6 2
(CQ231603) Sequence 18442 from Patent WO0157273. 40 3.6 2
(CQ148339) Sequence 18361 from Patent WO0157276. 40 3.6 2
(CQ109650) Sequence 18509 from Patent WO0157272. 40 3.6 2
(BZ217219) CH230-517P22.TV CHORI-230 Segment 2 Rattus norveg... 38 3.6 2
(EY343618) CAWZ12603.fwd CAWZ Helobdella robusta Primary Lat... 36 3.7 3
(DH592296) Rattus norvegicus DNA, BAC clone: RNB1-115C03, 5'... 40 3.8 3
(AG299199) Mus musculus molossinus DNA, clone:MSMg01-076K21.... 36 3.8 3
(AZ805656) 2M0067I12F Mouse 10kb plasmid UUGC1M library Mus ... 36 3.8 2
(EY386385) CAXA6195.rev CAXA Helobdella robusta Subtracted L... 38 4.0 3
(AX647283) Sequence 1475 from Patent EP1270724. 38 4.0 3
(BV570402) G591P65997RC1.T0 Clint Pan troglodytes verus STS ... 42 4.0 2
(BH356455) CH230-163J19.TV CHORI-230 Segment 1 Rattus norveg... 34 4.0 3
(EY331432) CAWY417.rev CAWY Helobdella robusta Subtracted Ea... 36 4.1 3
(EY337930) CAWY8665.fwd CAWY Helobdella robusta Subtracted E... 36 4.1 3
(CQ328712) Sequence 2806 from Patent WO0157275. 40 4.2 2
(CQ291656) Sequence 2761 from Patent WO0186003. 40 4.2 2
(CQ254568) Sequence 2829 from Patent WO0157277. 40 4.2 2
(CQ216011) Sequence 2850 from Patent WO0157273. 40 4.2 2
(CQ200487) Sequence 2764 from Patent WO0157271. 40 4.2 2
(CQ171376) Sequence 2772 from Patent WO0157274. 40 4.2 2
(CQ132793) Sequence 2815 from Patent WO0157276. 40 4.2 2
(CQ094005) Sequence 2864 from Patent WO0157272. 40 4.2 2
(CQ066955) Sequence 2755 from Patent WO0157278. 40 4.2 2
(CQ051911) Sequence 2731 from Patent WO0157270. 40 4.2 2
(AG986382) Hemicentrotus pulcherrimus BAC clone: BUB1-08N05_... 40 4.2 2
(EY344391) CAWZ13064.fwd CAWZ Helobdella robusta Primary Lat... 38 4.2 3
(EH012217) USDA-FP_185139 Lysiphlebus testaceipes adult whol... 32 4.3 3
(BZ223258) CH230-496O4.TVB CHORI-230 Segment 2 Rattus norveg... 36 4.3 2
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 38 4.3 12
(Z95308) C.hyalina microsatellite marker DNA (id T8). 36 4.4 2
(AC181850) Strongylocentrotus purpuratus clone R3-1022C20, W... 36 4.4 8
(EF207629) Excirolana hirsuticauda clone Ehir16 microsatelli... 32 4.6 3
(CR475781) RZPD Rattus norvegicus cDNA clone LIONp463H01391 ... 40 4.7 2
(EF747530) Mus musculus C57BL/6N IST10255E4BBF1 gene trap em... 36 4.8 2
(EB392924) PMAO-aaa49c06.g1 Lamprey_EST_Embryo Petromyzon ma... 40 4.8 2
(CD086566) MC1-0025T-R085-G05-U.G MC1-0025 Schistosoma manso... 34 4.9 3
(DH611327) Rattus norvegicus DNA, BAC clone: RNB1-140N08, 3'... 32 4.9 3
(GD417013) 454PCS0044704 Scarlet Runner Bean globular-stage ... 40 5.1 2
(EF424219) Homo sapiens cell-line somatic cell hybrid F1H4 c... 32 5.2 4
(DV415149) NADW181TR Aedes aegypti infected with Dengue viru... 42 5.3 2
(AC179467) Strongylocentrotus purpuratus clone R3-63K14, WOR... 36 5.3 4
(AL451000) Human DNA sequence from clone RP11-223J15 on chro... 44 5.3 5
(CX691857) ydd36e07.y2 Sea urchin EST Lib1 Strongylocentrotu... 36 5.3 2

>(BJ333867) Dictyostelium discoideum cDNA clone:dda44g07, 5' end,
single read.
Length = 657

Score = 666 bits (336), Expect(6) = 0.0
Identities = 336/336 (100%)
Strand = Plus / Plus


Query: 1 tatttgctccaactgcatttggtggcaatgcaccaccaacaacttcaactgctgttgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatttgctccaactgcatttggtggcaatgcaccaccaacaacttcaactgctgttgaat 60


Query: 61 cttcaaaattatttggcggcggtggtattactttcaatgcaccaaatatattcggtaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttcaaaattatttggcggcggtggtattactttcaatgcaccaaatatattcggtaaca 120


Query: 121 atagtaatccatcaaacttatttggcagtggtaataacaattcttcatcactatttggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atagtaatccatcaaacttatttggcagtggtaataacaattcttcatcactatttggtg 180


Query: 181 gtaattcaacaaccaatcctcctccattatttggaaataaatctgatgtcaaaactgagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtaattcaacaaccaatcctcctccattatttggaaataaatctgatgtcaaaactgagg 240


Query: 241 aatcagaaaagaaggctgaagcatgtactccatcaccatcaaccacatcaggtaaattaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatcagaaaagaaggctgaagcatgtactccatcaccatcaaccacatcaggtaaattaa 300


Query: 301 tttggaaatgtttatgttgtgaaactgaaaattcag 336
||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttggaaatgtttatgttgtgaaactgaaaattcag 336

Score = 111 bits (56), Expect(6) = 0.0
Identities = 68/72 (94%)
Strand = Plus / Plus


Query: 425 atcatcaatatttgctccaactgcatttggtggcaatgcaccaccaacaacttcaactgc 484
||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 422 atcatcattattcgctccaactgcatttggtggcaatgcaccaccaactacttcaactgc 481


Query: 485 tgttgactcttc 496
|||||| |||||
Sbjct: 482 tgttgaatcttc 493

Score = 105 bits (53), Expect(6) = 0.0
Identities = 68/73 (93%)
Strand = Plus / Plus


Query: 357 gtttgtatggtcccattaccaaagaatgtcaaatttgaatcaccagcttctgaatcaaat 416
||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gtttgtatggttccagttccaaagaatgtcaaatttgaatcaccagcttctgaatcaaat 416


Query: 417 actaaaccatcat 429
|| ||| ||||||
Sbjct: 417 accaaatcatcat 429

Score = 71.9 bits (36), Expect(6) = 0.0
Identities = 45/48 (93%)
Strand = Plus / Plus


Query: 563 taacaatagtaatccatcaaacttatttggcagtggtaataacaattc 610
|||||||| ||||||||||||||||||||| | |||||||||||||||
Sbjct: 553 taacaataataatccatcaaacttatttggaaatggtaataacaattc 600

Score = 46.1 bits (23), Expect(6) = 0.0
Identities = 35/39 (89%)
Strand = Plus / Plus


Query: 527 tattactttcaacgcaccaactttattcggtaacaataa 565
|||||||||||| |||| || | ||||||||||||||||
Sbjct: 523 tattactttcaatgcacgaaatatattcggtaacaataa 561

Score = 30.2 bits (15), Expect(6) = 0.0
Identities = 17/18 (94%)
Strand = Plus / Plus


Query: 624 ggtggcaattcaacaacc 641
||||| ||||||||||||
Sbjct: 617 ggtggnaattcaacaacc 634

Score = 151 bits (76), Expect(3) = 6e-76
Identities = 79/80 (98%)
Strand = Plus / Plus


Query: 563 taacaatagtaatccatcaaacttatttggcagtggtaataacaattcttcatcactatt 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 taacaatagtaatccatcaaacttatttggcagtggtaataacaattcttcatcactatt 175


Query: 623 tggtggcaattcaacaacca 642
|||||| |||||||||||||
Sbjct: 176 tggtggtaattcaacaacca 195

Score = 135 bits (68), Expect(3) = 6e-76
Identities = 74/76 (97%)
Strand = Plus / Plus


Query: 433 tatttgctccaactgcatttggtggcaatgcaccaccaacaacttcaactgctgttgact 492
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 tatttgctccaactgcatttggtggcaatgcaccaccaacaacttcaactgctgttgaat 60


Query: 493 cttctaaattatttgg 508
|||| |||||||||||
Sbjct: 61 cttcaaaattatttgg 76

Score = 52.0 bits (26), Expect(3) = 6e-76
Identities = 35/38 (92%)
Strand = Plus / Plus


Query: 527 tattactttcaacgcaccaactttattcggtaacaata 564
|||||||||||| ||||||| | |||||||||||||||
Sbjct: 86 tattactttcaatgcaccaaatatattcggtaacaata 123

Score = 129 bits (65), Expect(4) = 9e-62
Identities = 77/81 (95%)
Strand = Plus / Plus


Query: 83 tggtattactttcaatgcaccaaatatattcggtaacaatagtaatccatcaaacttatt 142
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 520 tggtattactttcaatgcacgaaatatattcggtaacaataataatccatcaaacttatt 579


Query: 143 tggcagtggtaataacaattc 163
||| | |||||||||||||||
Sbjct: 580 tggaaatggtaataacaattc 600

Score = 115 bits (58), Expect(4) = 9e-62
Identities = 64/66 (96%)
Strand = Plus / Plus


Query: 1 tatttgctccaactgcatttggtggcaatgcaccaccaacaacttcaactgctgttgaat 60
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 430 tattcgctccaactgcatttggtggcaatgcaccaccaactacttcaactgctgttgaat 489


Query: 61 cttcaa 66
||||||
Sbjct: 490 cttcaa 495

Score = 34.2 bits (17), Expect(4) = 9e-62
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 198 cctcctccattatttgg 214
|||||||||||||||||
Sbjct: 641 cctcctccattatttgg 657

Score = 30.2 bits (15), Expect(4) = 9e-62
Identities = 17/18 (94%)
Strand = Plus / Plus


Query: 177 ggtggtaattcaacaacc 194
||||| ||||||||||||
Sbjct: 617 ggtggnaattcaacaacc 634

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,753,528,610
Number of extensions: 112455777
Number of successful extensions: 11227910
Number of sequences better than 10.0: 715
Length of query: 2570
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 2545
Effective length of database: 96,311,147,814
Effective search space: 245111871186630
Effective search space used: 245111871186630
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.20
Homology vs Protein
Query= Contig-U16080-1 (Contig-U16080-1Q) /CSM_Contig/Contig-U16080-1Q.Seq.d
(2570 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC117075_92(AC117075|pid:none) Dictyostelium discoideum chromoso... 57 4e-06
CR555306_4110(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 39 0.73
(P38739) RecName: Full=Cell wall integrity and stress response c... 39 1.2
AM920437_715(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 38 1.6
CT005268_122(CT005268|pid:none) Leishmania major strain Friedlin... 38 2.1
AM502249_158(AM502249|pid:none) Leishmania infantum chromosome 31. 37 2.8
BT064752_1(BT064752|pid:none) Zea mays full-length cDNA clone ZM... 37 2.8
AE017341_447(AE017341|pid:none) Cryptococcus neoformans var. neo... 37 3.6
CR382127_358(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 36 6.2
FN392322_144(FN392322|pid:none) Pichia pastoris GS115 chromosome... 36 6.2
FN318991_1(FN318991|pid:none) Schistosoma japonicum isolate Anhu... 36 6.2

>AC117075_92(AC117075|pid:none) Dictyostelium discoideum chromosome
2 map 5201047-5455781 strain AX4, complete sequence.
Length = 786

Score = 56.6 bits (135), Expect = 4e-06
Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 4/167 (2%)
Frame = +3

Query: 240 ESEKKAEACT----PSPSTTSGKLIWKCLCCETENSEKEKSCSVCMVPLPKNVKFESPAS 407
E ++K CT P WKC CCETE+S+K+ +C+VCMVP PK
Sbjct: 496 EHDEKVNTCTVCMVPRLKKKPEDSKWKCACCETEHSDKDNTCTVCMVPRPK--------- 546

Query: 408 ESNTKPSSIFAPTAFGGNAPPTTSTAVDSSKLFGGGGSNTITFNAPTXXXXXXXXXXXXX 587
+++T S++ P VDS+ LF S ++ F+ P+
Sbjct: 547 QNSTAASAVVPP-------------KVDSASLFSAKPSASL-FSTPSTNTSNASDLFSKP 592

Query: 588 XXXXXXXXXXXXXXXXTTIQPSQSLFGTKSTETKSDDPMSLKEMSNT 728
+P SLF T +T T + + S S+T
Sbjct: 593 PQSLFSTTTTPTNASDLFSKPPPSLFSTTTTPTNASNLFSKPPPSST 639

Score = 50.4 bits (119), Expect = 3e-04
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 16/120 (13%)
Frame = +3

Query: 198 PPP---LFGNKSDVKTEESEKKAE---ACTPSPSTTSGKLI-----WKCLCCETENSEKE 344
PPP S EE +KK + TP+ + T+ K W C CE EN K
Sbjct: 634 PPPSSTTTSTNSSKPNEEEKKKTNPILSTTPTAAVTTTKTTKKDEKWICNSCENENDPKL 693

Query: 345 KSCSVCMVPLPKNVKFESPASESNTKPSSIFAPTAFGGN---APPTT--STAVDSSKLFG 509
KSC CMVP K K E+P K +S+F+ G N PP + S++ +++ LFG
Sbjct: 694 KSCDTCMVPRLK--KKETP------KTNSLFSAPVNGSNLFSQPPQSLFSSSTNTANLFG 745

Score = 47.8 bits (112), Expect = 0.002
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Frame = +3

Query: 240 ESEKKAEACT----PSPSTTSGKLIWKCLCCETENSEKEKSCSVCMVP----LPKNVKFE 395
E ++K CT P S + WKC CCE E+ EK +C+VCMVP P+ K++
Sbjct: 430 EHDEKVNTCTVCMVPRLKKKSEEAKWKCACCEAEHDEKVTTCTVCMVPRLKKKPEEAKWK 489

Query: 396 SPASES 413
E+
Sbjct: 490 CACCEA 495

Score = 46.6 bits (109), Expect = 0.005
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +3

Query: 294 KLIWKCLCCETENSEKEKSCSVCMVPLP 377
K +W+C CCET+N EK+K+CSVC V P
Sbjct: 756 KDLWRCPCCETDNDEKDKNCSVCAVQKP 783

Score = 46.2 bits (108), Expect = 0.006
Identities = 25/64 (39%), Positives = 33/64 (51%)
Frame = +3

Query: 207 LFGNKSDVKTEESEKKAEACTPSPSTTSGKLIWKCLCCETENSEKEKSCSVCMVPLPKNV 386
LFG + + +E+K T S T WKC CCE E+ EK +C+VCMVP K
Sbjct: 397 LFGPSTSTTIKPNEQKK---TESQDQTK----WKCACCEAEHDEKVNTCTVCMVPRLKKK 449

Query: 387 KFES 398
E+
Sbjct: 450 SEEA 453

Score = 45.8 bits (107), Expect = 0.008
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Frame = +3

Query: 303 WKCLCCETENSEKEKSCSVCMVP----LPKNVKFESPASESNTKPSSIFAPTAFGGNAPP 470
WKC CCE E+ EK +C+VCMVP P++ K++ E+
Sbjct: 177 WKCACCEAEHDEKVNTCTVCMVPRLKKKPEDSKWKCACCEAEHDEKVNTCTVCMVPRLKK 236

Query: 471 TTSTA-------VDSSKLFGGGGSNTITFNAPT 548
++TA VDS+ LF S ++ F+AP+
Sbjct: 237 NSTTASAVVPPKVDSASLFSAKPSASL-FSAPS 268

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,360,901,463
Number of extensions: 41942175
Number of successful extensions: 161854
Number of sequences better than 10.0: 11
Number of HSP's gapped: 157691
Number of HSP's successfully gapped: 16
Length of query: 856
Length of database: 1,051,180,864
Length adjustment: 137
Effective length of query: 719
Effective length of database: 607,772,281
Effective search space: 436988270039
Effective search space used: 436988270039
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.09 gvh: -0.20 alm: 0.60 top: 0.53 tms: 0.00 mit: 0.20 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: nuclear
36.0 %: cytoplasmic
8.0 %: mitochondrial
4.0 %: cytoskeletal

>> prediction for Contig-U16080-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 0
SL (DIR, L) 3
SS (DIR, S) 0
SH (FL, L) 1
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0