| Contig-U16046-1 |
| Contig ID |
Contig-U16046-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1793 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
4682540 |
| End point |
4684215 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
23 |
| Number of EST |
26 |
| Link to clone list |
U16046 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 3. 8 |
| Homology vs DNA |
Query= Contig-U16046-1 (Contig-U16046-1Q) /CSM_Contig/Contig-U16046-1Q.Seq.d
(1803 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 1657 0.0 1
(BJ430477) Dictyostelium discoideum cDNA clone:ddv7k12, 3' e... 1473 0.0 1
(BJ373955) Dictyostelium discoideum cDNA clone:ddc5g15, 3' e... 1445 0.0 1
(BJ430609) Dictyostelium discoideum cDNA clone:ddv7o20, 3' e... 1425 0.0 1
(BJ428973) Dictyostelium discoideum cDNA clone:ddv1l23, 3' e... 1380 0.0 2
(AU034786) Dictyostelium discoideum slug cDNA, clone SLE328. 1352 0.0 1
(BJ431190) Dictyostelium discoideum cDNA clone:ddv13m03, 3' ... 1318 0.0 1
(AU061457) Dictyostelium discoideum slug cDNA, clone SLE328. 1257 0.0 1
(BJ410802) Dictyostelium discoideum cDNA clone:ddv1l23, 5' e... 1231 0.0 2
(AU261865) Dictyostelium discoideum vegetative cDNA clone:VS... 1215 0.0 1
(BJ411428) Dictyostelium discoideum cDNA clone:ddv4j11, 5' e... 1213 0.0 2
(BJ416830) Dictyostelium discoideum cDNA clone:ddv27p08, 5' ... 1199 0.0 2
(BJ412214) Dictyostelium discoideum cDNA clone:ddv7k12, 5' e... 1197 0.0 2
(BJ417809) Dictyostelium discoideum cDNA clone:ddv28k22, 5' ... 1193 0.0 2
(BJ323421) Dictyostelium discoideum cDNA clone:dda10c17, 5' ... 1160 0.0 2
(BJ412331) Dictyostelium discoideum cDNA clone:ddv7o20, 5' e... 1152 0.0 2
(BJ417025) Dictyostelium discoideum cDNA clone:ddv29m01, 5' ... 1080 0.0 2
(BJ360330) Dictyostelium discoideum cDNA clone:ddc5g15, 5' e... 1025 0.0 2
(BJ411500) Dictyostelium discoideum cDNA clone:ddv4n18, 5' e... 1025 0.0 2
(BJ387286) Dictyostelium discoideum cDNA clone:dds1g11, 5' e... 938 0.0 3
(BJ360224) Dictyostelium discoideum cDNA clone:ddc5d03, 5' e... 620 e-173 1
(BJ398634) Dictyostelium discoideum cDNA clone:dds1g11, 3' e... 127 2e-24 1
(AC115581) Dictyostelium discoideum chromosome 2 map complem... 88 9e-19 10
(BJ432041) Dictyostelium discoideum cDNA clone:ddv17m12, 3' ... 80 3e-16 4
(BJ415346) Dictyostelium discoideum cDNA clone:ddv22d07, 5' ... 88 6e-14 2
(AX344564) Sequence 15 from Patent WO0200932. 32 4e-04 16
(BJ433563) Dictyostelium discoideum cDNA clone:ddv22d07, 3' ... 38 6e-04 4
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 36 0.001 17
(BJ428117) Dictyostelium discoideum cDNA clone:ddv10f21, 3' ... 38 0.002 4
(AU261836) Dictyostelium discoideum vegetative cDNA clone:VS... 44 0.004 2
(AC144288) Macaca mulatta clone CH250-271M12, *** SEQUENCING... 44 0.005 2
(CU633989) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 0.008 2
(DD010736) Diagnosis of known genetic Parameters within the ... 34 0.028 18
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 38 0.035 19
(CU302410) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 0.035 5
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 42 0.041 22
(CR847985) Zebrafish DNA sequence from clone CH211-220F16 in... 42 0.057 2
(FB571326) Sequence 193 from Patent EP1865317. 36 0.068 12
(BJ433596) Dictyostelium discoideum cDNA clone:ddv22i12, 3' ... 38 0.069 3
(AY198133) Spiroplasma kunkelii strain CR2-3x partial genome... 34 0.072 8
(DT484172) WS02524.B21_K11 PT-MB-N-A-15 Populus trichocarpa ... 44 0.12 2
(DT479060) WS02524.BR_K11 PT-MB-N-A-15 Populus trichocarpa c... 44 0.13 2
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 32 0.15 15
(EK396154) 1095469522063 Global-Ocean-Sampling_GS-31-01-01-1... 46 0.16 3
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 32 0.20 14
(AU262399) Dictyostelium discoideum vegetative cDNA clone:VS... 38 0.22 2
(AC006889) Caenorhabditis elegans clone Y65B4, *** SEQUENCIN... 40 0.22 13
(AU271144) Dictyostelium discoideum vegetative cDNA clone:VS... 38 0.23 2
(AU271145) Dictyostelium discoideum vegetative cDNA clone:VS... 38 0.23 2
(DJ386619) Diagnosis of Diseases Associated with Metastasis. 38 0.30 4
(AX348683) Sequence 141 from Patent WO0202807. 38 0.30 4
(AX345982) Sequence 1053 from Patent WO0200928. 38 0.30 4
(AX281415) Sequence 79 from Patent WO0177376. 38 0.30 4
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 32 0.31 14
(FB332198) Sequence 5 from Patent WO2007115213. 32 0.32 17
(CS448321) Sequence 5 from Patent WO2006117381. 32 0.32 17
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 34 0.33 21
(AE014824) Plasmodium falciparum 3D7 chromosome 14 section 9... 34 0.35 13
(FB676003) Sequence 6 from Patent WO2007118704. 32 0.36 17
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 42 0.38 15
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 48 0.38 14
(EK170663) 1095458072360 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.44 2
(AC219538) Bos taurus clone CH240-330G5, WORKING DRAFT SEQUE... 40 0.49 5
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 32 0.63 17
(AP009887) Lotus japonicus genomic DNA, chromosome 3, clone:... 34 1.00 9
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 36 1.1 10
(EA374851) Sequence 87 from patent US 7314971. 48 1.2 1
(CQ815032) Sequence 32 from Patent WO2004039988. 48 1.2 1
(AR898678) Sequence 87 from patent US 7071375. 48 1.2 1
(DT465169) GH_CHX16O15.f GH_CHX Gossypium hirsutum cDNA clon... 48 1.2 1
(CO081754) GR__Ea46A13.r GR__Ea Gossypium raimondii cDNA clo... 48 1.2 1
(ES814404) UFL_282_21 Cotton fiber 0-10 day post anthesis Go... 48 1.2 1
(FB332204) Sequence 11 from Patent WO2007115213. 32 1.2 16
(CS448327) Sequence 11 from Patent WO2006117381. 32 1.2 16
(AE017243) Mycoplasma hyopneumoniae J, complete genome. 34 1.3 21
(FB676007) Sequence 10 from Patent WO2007118704. 32 1.3 16
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 38 1.4 11
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 38 1.5 9
(CS468880) Sequence 71 from Patent EP1748080. 32 1.5 13
(CS419357) Sequence 71 from Patent WO2006094836. 32 1.5 13
(FH007341) CHO_OF407xf02r1.ab1 CHO_OF Nicotiana tabacum geno... 32 1.6 3
(AM432636) Vitis vinifera contig VV78X135053.6, whole genome... 44 1.6 3
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 34 1.7 16
(AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8... 30 1.7 15
(EU557674) Solanum lycopersicum FAS protein (fasciated) mRNA... 46 1.7 2
(AC216674) Populus trichocarpa clone POP021-E05, complete se... 42 1.8 9
(FB571370) Sequence 237 from Patent EP1865317. 32 1.9 9
(FB571314) Sequence 181 from Patent EP1865317. 32 1.9 9
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome. 32 2.1 14
(AK248039) Solanum lycopersicum cDNA, clone: LEFL2036B07, HT... 46 2.1 2
(AX344565) Sequence 16 from Patent WO0200932. 36 2.1 13
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 32 2.4 11
(AM485685) Vitis vinifera contig VV78X003491.4, whole genome... 36 2.5 3
(ED799461) MG__Ba0004F07r MG__Ba Mimulus guttatus genomic, g... 44 2.8 2
(ES279001) PT016E9.XT7 in vitro interaction, P. brassicae Ph... 32 2.9 3
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 34 3.4 14
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 34 3.5 13
(AX346074) Sequence 1145 from Patent WO0200928. 34 3.6 6
(AC113355) Homo sapiens chromosome 5 clone CTD-3007L5, compl... 38 3.7 7
(BG893513) kt10d09.y2 Strongyloides ratti L1 pAMP1 v3 Chiape... 40 4.2 2
(CG136696) PUIET09TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 42 4.3 2
(AL399574) T7 end of clone AS0AA016A04 of library AS0AA from... 46 4.6 1
(AC156835) Mus musculus BAC clone RP23-322L4 from chromosome... 46 4.6 1
(EU557676) Solanum lycopersicum nonfunctional mutant FAS pro... 46 4.6 1
(EU557673) Solanum lycopersicum FAS protein (fasciated) gene... 46 4.6 1
(AC171736) Solanum lycopersicum chromosome 11 clone C11HBa03... 46 4.6 1
(AX323769) Sequence 257 from Patent WO0192565. 46 4.6 1
(AC137231) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 46 4.6 1
(AC133219) Rattus norvegicus clone CH230-2F24, *** SEQUENCIN... 46 4.6 1
(AC110463) Rattus norvegicus clone CH230-290I2, *** SEQUENCI... 46 4.6 1
(AC108539) Rattus norvegicus clone CH230-109E20, *** SEQUENC... 46 4.6 1
(AC101351) Mus musculus clone RP23-111E24, LOW-PASS SEQUENCE... 46 4.6 1
(AC177452) Strongylocentrotus purpuratus clone R3-5M05, WORK... 46 4.6 1
(AC177370) Strongylocentrotus purpuratus clone R3-52L23, WOR... 46 4.6 1
(AC174224) Strongylocentrotus purpuratus clone R3-53C20, WOR... 46 4.6 1
(EK315901) 1095462412836 Global-Ocean-Sampling_GS-31-01-01-1... 46 4.6 1
(EJ851977) 1093017894285 Global-Ocean-Sampling_GS-30-02-01-1... 46 4.6 1
(EJ845751) 1093017854173 Global-Ocean-Sampling_GS-30-02-01-1... 46 4.6 1
(EJ824338) 1093017553370 Global-Ocean-Sampling_GS-30-02-01-1... 46 4.6 1
(EJ730926) 1092960128829 Global-Ocean-Sampling_GS-30-02-01-1... 46 4.6 1
(EJ683200) 1092955151281 Global-Ocean-Sampling_GS-30-02-01-1... 46 4.6 1
(EJ494988) 1095403565495 Global-Ocean-Sampling_GS-28-01-01-1... 46 4.6 1
(EJ363834) 1092963698108 Global-Ocean-Sampling_GS-28-01-01-1... 46 4.6 1
(AL398007) T3 end of clone AS0AA006E01 of library AS0AA from... 46 4.6 1
(CW594591) OA_ABa0130A17.f OA_ABa Oryza australiensis genomi... 46 4.6 1
(BH701358) BOMEJ28TF BO_2_3_KB Brassica oleracea genomic clo... 46 4.6 1
(ES271428) JKBNM5_T7_007_H05_30JUN2004_033 JKBNM5 Brassica n... 46 4.6 1
(EB686109) CP28_F05_044.f1 Citrus paradisi young grapefruit ... 46 4.6 1
(DC896187) Citrus unshiu mRNA, clone: PCC0773, 5'-end sequen... 46 4.6 1
(DC891376) Citrus unshiu mRNA, clone: GSA1950, 5'-end sequen... 46 4.6 1
(DC886090) Citrus unshiu mRNA, clone: BFC4E69, 5'-end sequen... 46 4.6 1
(CX070218) UCRCS08_15E04_g Parent Washington Navel Orange Ca... 46 4.6 1
(CX070217) UCRCS08_15E04_b Parent Washington Navel Orange Ca... 46 4.6 1
(CX050777) UCRCS09_34E03_b Ruby Orange Developing Seed cDNA ... 46 4.6 1
(CX050776) UCRCS09_34E03_g Ruby Orange Developing Seed cDNA ... 46 4.6 1
(CV885310) UCRCS04_2_014050_T3 Ruby Orange Developing Flower... 46 4.6 1
(CK934858) CGF1004225_H02 Developing fruit peel at 38 DAFB C... 46 4.6 1
(CK739842) USDA-FP_6232 Ridge pineapple sweet orange entire ... 46 4.6 1
(AI613170) tw61h05.x1 NCI_CGAP_Ut3 Homo sapiens cDNA clone I... 46 4.6 1
(BW688229) Solanum lycopersicum cDNA, clone: FC11CA04, 5' en... 46 4.6 1
(BW688055) Solanum lycopersicum cDNA, clone: FC11AA02, 5' en... 46 4.6 1
(BG206508) RST25958 Athersys RAGE Library Homo sapiens cDNA,... 46 4.6 1
(BF695684) 601852414F1 NIH_MGC_56 Homo sapiens cDNA clone IM... 46 4.6 1
(FG564986) BN18DYSC_UP_142_G04_3APR2008_020 BN18DYSC Brassic... 46 4.6 1
(FG560531) BN18DYSC_UP_087_A08_5MAR2008_064 BN18DYSC Brassic... 46 4.6 1
(EY859703) CM30-C1-401-022-B06-CT.F Sweet lime leaf, infecte... 46 4.6 1
(EX445579) Volcani_7_10_A1 Volcani07 Citrus reticulata x Cit... 46 4.6 1
(ES918339) 24RDBNH_UP_132_B06_13DEC2006_046 Brassica napus 2... 46 4.6 1
(CT528451) A BAC library has been constructed from cultivar ... 34 4.6 3
(EF457751) Gossypium raimondii transposon Mutator-like, comp... 38 4.6 8
(AL132948) Caenorhabditis elegans YAC Y39B6A. 38 4.7 9
(AC114258) Dictyostelium discoideum chromosome 2 map complem... 36 4.7 6
(AM467805) Vitis vinifera contig VV78X114651.5, whole genome... 38 4.7 2
(AC181389) Strongylocentrotus purpuratus clone R3-4I06, WORK... 38 5.1 6
(AX346974) Sequence 2045 from Patent WO0200928. 40 5.1 6
(AM450983) Vitis vinifera contig VV78X089081.4, whole genome... 38 5.2 4
(BD428887) Method and nucleic acids for pharmacogenomic meth... 36 5.2 4
(AX348366) Sequence 61 from Patent WO0202806. 36 5.2 4
(AX339144) Sequence 11 from Patent WO0176451. 36 5.2 4
(EA681798) Sequence 60677 from patent US 7365185. 38 5.3 2
(CP000361) Arcobacter butzleri RM4018, complete genome. 34 5.4 21
(BZ971641) PUGJC42TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 42 5.4 2
(CG350667) OGWIP41TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 42 5.5 2
(EJ058962) 1095456052212 Global-Ocean-Sampling_GS-26-01-01-1... 36 5.7 3
(BM325265) PIC1_42_E02.b1_A002 Pathogen-infected compatible ... 38 5.8 2
(FG539566) OtL007G04_121306c Onthophagus taurus larval libra... 38 5.8 2
(EE130263) SiJWB06ABY Lausanne fire ant library Solenopsis i... 40 6.0 2
(AC006793) Caenorhabditis elegans clone Y50C1b, *** SEQUENCI... 40 6.1 6
(BJ429731) Dictyostelium discoideum cDNA clone:ddv4o14, 3' e... 40 6.2 2
(EJ798526) 1093017414274 Global-Ocean-Sampling_GS-30-02-01-1... 34 6.2 3
(FC814850) Sr_pAMT7_01g07_T7 S. ratti mixed stage pAMP Stron... 40 6.2 2
(BD453072) Diagnosis of Diseases Associated with tumor suppr... 36 6.2 7
(AX251551) Sequence 519 from Patent WO0168912. 36 6.2 7
(EJ890989) 1093018442622 Global-Ocean-Sampling_GS-30-02-01-1... 34 6.3 3
(AC203060) Acyrthosiphon pisum BAC VMRC38-30-A10 (Benaroya ... 36 6.4 9
(CG244768) OGZAL57TH ZM_0.7_1.5_KB Zea mays genomic clone ZM... 42 6.8 2
(CG453333) OGVHO11TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 42 7.2 2
(AX356496) Sequence 130 from Patent WO0181622. 36 7.3 3
(AX280010) Sequence 32 from Patent WO0177378. 36 7.3 3
(CC354797) PUHMX15TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 42 7.6 2
(CG244778) OGZAL57TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 42 7.7 2
(AC168448) Strongylocentrotus purpuratus clone R3-39A6, WORK... 34 8.3 5
(AC040990) Homo sapiens chromosome 4 clone RP11-109M22 map 4... 32 8.4 2
(EK119164) 1092963324353 Global-Ocean-Sampling_GS-31-01-01-1... 30 8.6 4
(AX347088) Sequence 2159 from Patent WO0200928. 32 8.7 5
(AC108033) Homo sapiens BAC clone RP11-109M22 from 4, comple... 32 8.7 2
(AM488181) Vitis vinifera contig VV78X069136.9, whole genome... 40 8.9 5
(EU404112) Campylobacter jejuni strain RM3437 class Q lipool... 34 9.0 5
(CR450713) Zebrafish DNA sequence from clone DKEY-264H9 in l... 34 9.2 7
(FB571382) Sequence 249 from Patent EP1865317. 32 9.8 12
>(AC116956) Dictyostelium discoideum chromosome 2 map 1418423-1684967
strain AX4, complete sequence.
Length = 266544
Score = 1657 bits (836), Expect = 0.0
Identities = 836/836 (100%)
Strand = Plus / Minus
Query: 221 tattttatgaaacaattgaagatgaattattatgtattgcacatgaaaatgatgttagat 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224921 tattttatgaaacaattgaagatgaattattatgtattgcacatgaaaatgatgttagat 224862
Query: 281 tagtatggggtacaacatttccaattgaaaatcttggtaattcaagttatattgaagaat 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224861 tagtatggggtacaacatttccaattgaaaatcttggtaattcaagttatattgaagaat 224802
Query: 341 ggattcaagaacaaattgaaaaagttcaaagtacatttacagatggtttaaattttgatg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224801 ggattcaagaacaaattgaaaaagttcaaagtacatttacagatggtttaaattttgatg 224742
Query: 401 ttgaaagtccaattacagatccaaccatcgctcaacaatatacagaattagtatcagcaa 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224741 ttgaaagtccaattacagatccaaccatcgctcaacaatatacagaattagtatcagcaa 224682
Query: 461 ctaataaagcatttaaagcaattaatccattctatcaaatttcaatcgatgtagcatggt 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224681 ctaataaagcatttaaagcaattaatccattctatcaaatttcaatcgatgtagcatggt 224622
Query: 521 caccatcatgcattgataaacgttgttatgattatgctggtttagcttcaaattccgatt 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224621 caccatcatgcattgataaacgttgttatgattatgctggtttagcttcaaattccgatt 224562
Query: 581 tccttgtagcaatggactatgatgagagaagtcaagtttttggtgagaaggtgtgtactg 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224561 tccttgtagcaatggactatgatgagagaagtcaagtttttggtgagaaggtgtgtactg 224502
Query: 641 ctggtgcaaattcttcaccctcaaatgccttggctggtataaataattttactgatttag 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224501 ctggtgcaaattcttcaccctcaaatgccttggctggtataaataattttactgatttag 224442
Query: 701 gtattagcactgatcaattggtaatgggtttaccatggtatggttatatttataagaatt 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224441 gtattagcactgatcaattggtaatgggtttaccatggtatggttatatttataagaatt 224382
Query: 761 gtttaaatggtgatgaagcaggtttggaaactgttgtttgtcaaattgaatctgtaccat 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224381 gtttaaatggtgatgaagcaggtttggaaactgttgtttgtcaaattgaatctgtaccat 224322
Query: 821 ttagaggtgcaaattgttcagatgcagctggttcagaatatgattatagttatttggttc 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224321 ttagaggtgcaaattgttcagatgcagctggttcagaatatgattatagttatttggttc 224262
Query: 881 aattattacaagatcaaactataaactcttctgcagttcaatggaatactgaatggcaat 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224261 aattattacaagatcaaactataaactcttctgcagttcaatggaatactgaatggcaat 224202
Query: 941 caccttattttaattatattgaccctataactggtaatgttgatcaagtttggtttgata 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224201 caccttattttaattatattgaccctataactggtaatgttgatcaagtttggtttgata 224142
Query: 1001 atccacaatcattatcaattaaagttcaattagctcaaaaattaaatttaagaggt 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224141 atccacaatcattatcaattaaagttcaattagctcaaaaattaaatttaagaggt 224086
Score = 470 bits (237), Expect(6) = 0.0
Identities = 237/237 (100%)
Strand = Plus / Minus
Query: 1188 tactgatttaggtattagcactgatcaattggtaatgggtttaccatggtatggttatat 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224452 tactgatttaggtattagcactgatcaattggtaatgggtttaccatggtatggttatat 224393
Query: 1248 ttataagaattgtttaaatggtgatgaagcaggtttggaaactgttgtttgtcaaattga 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224392 ttataagaattgtttaaatggtgatgaagcaggtttggaaactgttgtttgtcaaattga 224333
Query: 1308 atctgtaccatttagaggtgcaaattgttcagatgcagctggttcagaatatgattatag 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224332 atctgtaccatttagaggtgcaaattgttcagatgcagctggttcagaatatgattatag 224273
Query: 1368 ttatttggttcaattattacaagatcaaactataaactcttctgcagttcaatggaa 1424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224272 ttatttggttcaattattacaagatcaaactataaactcttctgcagttcaatggaa 224216
Score = 349 bits (176), Expect(6) = 0.0
Identities = 176/176 (100%)
Strand = Plus / Minus
Query: 45 aattgttttcgttgttgctcaaagttcatcatcatcatcctcttcaggatgtccatgtga 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225197 aattgttttcgttgttgctcaaagttcatcatcatcatcctcttcaggatgtccatgtga 225138
Query: 105 ttcatcatatttatgtgaaccacttcaaattgcaccaagacaagagtttttaggtttttc 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225137 ttcatcatatttatgtgaaccacttcaaattgcaccaagacaagagtttttaggtttttc 225078
Query: 165 attaaatagcacgcaatatccaaattattattggaatcaattaacaacacttgcga 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225077 attaaatagcacgcaatatccaaattattattggaatcaattaacaacacttgcga 225022
Score = 242 bits (122), Expect(6) = 0.0
Identities = 122/122 (100%)
Strand = Plus / Minus
Query: 1553 aggtgttgcagtttggaatattgattttttagatttttcagatcaatacaattctcgtcc 1612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223981 aggtgttgcagtttggaatattgattttttagatttttcagatcaatacaattctcgtcc 223922
Query: 1613 aatgtgggatgcattagcttcttttttcccacaatcagcttcaagtgaacaatcattaaa 1672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223921 aatgtgggatgcattagcttcttttttcccacaatcagcttcaagtgaacaatcattaaa 223862
Query: 1673 tt 1674
||
Sbjct: 223861 tt 223860
Score = 242 bits (122), Expect(6) = 0.0
Identities = 122/122 (100%)
Strand = Plus / Minus
Query: 1435 ggcaatcaccttattttaattatattgaccctataactggtaatgttgatcaagtttggt 1494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224207 ggcaatcaccttattttaattatattgaccctataactggtaatgttgatcaagtttggt 224148
Query: 1495 ttgataatccacaatcattatcaattaaagttcaattagctcaaaaattaaatttaagag 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224147 ttgataatccacaatcattatcaattaaagttcaattagctcaaaaattaaatttaagag 224088
Query: 1555 gt 1556
||
Sbjct: 224087 gt 224086
Score = 73.8 bits (37), Expect(6) = 0.0
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 1 atttattattttaccacgatgagaattattttattgc 37
|||||||||||||||||||||||||||||||||||||
Sbjct: 225241 atttattattttaccacgatgagaattattttattgc 225205
Score = 30.2 bits (15), Expect(6) = 0.0
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1787 attttttaaattttt 1801
|||||||||||||||
Sbjct: 32186 attttttaaattttt 32172
Score = 242 bits (122), Expect = 4e-59
Identities = 122/122 (100%)
Strand = Plus / Minus
Query: 1053 aggtgttgcagtttggaatattgattttttagatttttcagatcaatacaattctcgtcc 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223981 aggtgttgcagtttggaatattgattttttagatttttcagatcaatacaattctcgtcc 223922
Query: 1113 aatgtgggatgcattagcttcttttttcccacaatcagcttcaagtgaacaatcattaaa 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223921 aatgtgggatgcattagcttcttttttcccacaatcagcttcaagtgaacaatcattaaa 223862
Query: 1173 tt 1174
||
Sbjct: 223861 tt 223860
Score = 30.2 bits (15), Expect(16) = 8.3
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1514 atcaattaaagttcaatta 1532
||||| |||||||||||||
Sbjct: 45376 atcaaataaagttcaatta 45358
Score = 30.2 bits (15), Expect(16) = 8.3
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1442 accttattttaatta 1456
|||||||||||||||
Sbjct: 106487 accttattttaatta 106473
Score = 30.2 bits (15), Expect(16) = 8.3
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1035 tcaaaaattaaatttaaga 1053
|||||||||||||| ||||
Sbjct: 197640 tcaaaaattaaattcaaga 197622
Score = 30.2 bits (15), Expect(16) = 8.3
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 69 ttcatcatcatcatc 83
|||||||||||||||
Sbjct: 215268 ttcatcatcatcatc 215254
Score = 28.2 bits (14), Expect(16) = 8.3
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 1788 ttttttaaattttt 1801
||||||||||||||
Sbjct: 3466 ttttttaaattttt 3453
Score = 28.2 bits (14), Expect(16) = 8.3
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 1472 tggtaatgttgatc 1485
||||||||||||||
Sbjct: 66963 tggtaatgttgatc 66950
Score = 28.2 bits (14), Expect(16) = 8.3
Identities = 17/18 (94%)
Strand = Plus / Minus
Query: 1259 gtttaaatggtgatgaag 1276
|||| |||||||||||||
Sbjct: 124839 gttttaatggtgatgaag 124822
Score = 26.3 bits (13), Expect(16) = 8.3
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 1662 caatcattaaatt 1674
|||||||||||||
Sbjct: 12834 caatcattaaatt 12822
Score = 26.3 bits (13), Expect(16) = 8.3
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 1585 atttttcagatca 1597
|||||||||||||
Sbjct: 23302 atttttcagatca 23290
Score = 26.3 bits (13), Expect(16) = 8.3
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 1572 attgattttttag 1584
|||||||||||||
Sbjct: 33002 attgattttttag 32990
Score = 26.3 bits (13), Expect(16) = 8.3
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 1212 tcaattggtaatg 1224
|||||||||||||
Sbjct: 139732 tcaattggtaatg 139720
Score = 26.3 bits (13), Expect(16) = 8.3
Identities = 16/17 (94%)
Strand = Plus / Minus
Query: 1071 tattgattttttagatt 1087
|||| ||||||||||||
Sbjct: 144250 tattaattttttagatt 144234
Score = 26.3 bits (13), Expect(16) = 8.3
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 714 tcaattggtaatg 726
|||||||||||||
Sbjct: 200460 tcaattggtaatg 200448
Score = 26.3 bits (13), Expect(16) = 8.3
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 374 catttacagatgg 386
|||||||||||||
Sbjct: 209221 catttacagatgg 209209
Score = 26.3 bits (13), Expect(16) = 8.3
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 297 atttccaattgaa 309
|||||||||||||
Sbjct: 209481 atttccaattgaa 209469
Score = 26.3 bits (13), Expect(16) = 8.3
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 22 agaattattttat 34
|||||||||||||
Sbjct: 251686 agaattattttat 251674
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,250,465,256
Number of extensions: 141856425
Number of successful extensions: 13022759
Number of sequences better than 10.0: 191
Length of query: 1803
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1779
Effective length of database: 96,409,374,237
Effective search space: 171512276767623
Effective search space used: 171512276767623
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.20 |
| Homology vs Protein |
Query= Contig-U16046-1 (Contig-U16046-1Q) /CSM_Contig/Contig-U16046-1Q.Seq.d
(1803 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q8R242) RecName: Full=Di-N-acetylchitobiase; EC=3.2.1.... 258 4e-67
BC088895_1(BC088895|pid:none) Xenopus tropicalis hypothetical LO... 257 9e-67
AY260731_1(AY260731|pid:none) Xenopus laevis putative di-N-acety... 249 3e-64
AB168353_1(AB168353|pid:none) Macaca fascicularis testis cDNA cl... 248 4e-64
BC164759_1(BC164759|pid:none) Danio rerio chitobiase, di-N-acety... 244 6e-63
BC095064_1(BC095064|pid:none) Danio rerio chitobiase, di-N-acety... 244 6e-63
AK314640_1(AK314640|pid:none) Homo sapiens cDNA, FLJ95483, highl... 244 8e-63
BC072723_1(BC072723|pid:none) Danio rerio chitobiase, di-N-acety... 243 2e-62
BC022594_1(BC022594|pid:none) Mus musculus chitobiase, di-N-acet... 226 2e-57
AC115592_28(AC115592|pid:none) Dictyostelium discoideum chromoso... 223 2e-56
AK008791_1(AK008791|pid:none) Mus musculus adult male stomach cD... 176 3e-42
AF085714_1(AF085714|pid:none) Bos taurus lysosomal di-N-acetylch... 132 3e-29
B44102(B44102)di-N-acetylchitobiase (EC 3.2.1.-) - bovine (fragm... 77 3e-12
AE001437_1536(AE001437|pid:none) Clostridium acetobutylicum ATCC... 75 1e-11
DQ407658_1(DQ407658|pid:none) Acanthamoeba castellanii chitobias... 73 4e-11
AY458631_7(AY458631|pid:none) Uncultured marine bacterium 159 cl... 70 3e-10
CP001098_2164(CP001098|pid:none) Halothermothrix orenii H 168, c... 68 1e-09
AP008230_133(AP008230|pid:none) Desulfitobacterium hafniense Y51... 68 1e-09
CP001098_2150(CP001098|pid:none) Halothermothrix orenii H 168, c... 67 2e-09
CP000853_1520(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 61 2e-07
BA000043_2077(BA000043|pid:none) Geobacillus kaustophilus HTA426... 61 2e-07
AX411859_1(AX411859|pid:none) Sequence 20 from Patent WO0222807. 60 3e-07
CP000724_1058(CP000724|pid:none) Alkaliphilus metalliredigens QY... 60 3e-07
AF178772_1(AF178772|pid:none) Dermatophagoides farinae 98kDa HDM... 60 3e-07
CP000560_1225(CP000560|pid:none) Bacillus amyloliquefaciens FZB4... 59 4e-07
(O05495) RecName: Full=Putative sporulation-specific glycosylase... 59 4e-07
AL009126_587(AL009126|pid:none) Bacillus subtilis subsp. subtili... 59 4e-07
(Q9W092) RecName: Full=Probable chitinase 2; EC=3.2.1.1... 59 6e-07
AX411873_1(AX411873|pid:none) Sequence 34 from Patent WO0222807.... 59 8e-07
AX411879_1(AX411879|pid:none) Sequence 40 from Patent WO0222807. 59 8e-07
AP006840_537(AP006840|pid:none) Symbiobacterium thermophilum IAM... 58 1e-06
CP000568_2851(CP000568|pid:none) Clostridium thermocellum ATCC 2... 58 1e-06
A53918(A53918) chitinase (EC 3.2.1.14) precursor - braconid wasp... 57 2e-06
CP000113_1596(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 57 3e-06
Y13234_1(Y13234|pid:none) Chironomus tentans mRNA for chitinase,... 56 4e-06
Y13233_1(Y13233|pid:none) Chironomus tentans mRNA for chitinase,... 56 4e-06
CP001337_1346(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 56 4e-06
CP000909_1654(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 56 5e-06
AP009049_908(AP009049|pid:none) Clostridium kluyveri NBRC 12016 ... 55 8e-06
BC065893_1(BC065893|pid:none) Danio rerio zgc:55406, mRNA (cDNA ... 55 1e-05
CP000382_618(CP000382|pid:none) Clostridium novyi NT, complete g... 54 1e-05
AP007157_332(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 54 2e-05
CP000885_1633(CP000885|pid:none) Clostridium phytofermentans ISD... 54 2e-05
CP001083_1176(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 54 2e-05
AY873915_1(AY873915|pid:none) Tribolium castaneum chitinase 16 (... 54 2e-05
CP000728_1191(CP000728|pid:none) Clostridium botulinum F str. La... 54 2e-05
AY889146_1(AY889146|pid:none) Synthetic construct Homo sapiens c... 53 3e-05
CP000939_1210(CP000939|pid:none) Clostridium botulinum B1 str. O... 53 3e-05
AJ535688_1(AJ535688|pid:none) Oncorhynchus mykiss mRNA for chiti... 53 3e-05
AY891691_1(AY891691|pid:none) Synthetic construct Homo sapiens c... 53 3e-05
AP006627_3104(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 53 3e-05
CP000724_3562(CP000724|pid:none) Alkaliphilus metalliredigens QY... 53 3e-05
(Q6RY07) RecName: Full=Acidic mammalian chitinase; Shor... 53 4e-05
AY873914_1(AY873914|pid:none) Tribolium castaneum chitinase 3 (C... 53 4e-05
CP000612_633(CP000612|pid:none) Desulfotomaculum reducens MI-1, ... 53 4e-05
CP000568_1779(CP000568|pid:none) Clostridium thermocellum ATCC 2... 52 5e-05
DQ307191_1(DQ307191|pid:none) Glossina morsitans morsitans clone... 52 5e-05
EU877961_1(EU877961|pid:none) Oncorhynchus mykiss myeloid cell l... 52 5e-05
AY928055_1(AY928055|pid:none) Toxoneuron nigriceps teratocyte re... 52 5e-05
AM412317_1205(AM412317|pid:none) Clostridium botulinum A str. AT... 52 5e-05
AX930154_1(AX930154|pid:none) Sequence 110 from Patent WO0308714... 52 7e-05
(Q15782) RecName: Full=Chitinase-3-like protein 2; AltName: Full... 52 9e-05
CP001581_1257(CP001581|pid:none) Clostridium botulinum A2 str. K... 52 9e-05
U58515_1(U58515|pid:none) Human chitinase (HUMTCHIT) mRNA, exon ... 52 9e-05
U49835_1(U49835|pid:none) Human YKL-39 precursor mRNA, complete ... 52 9e-05
AK298466_1(AK298466|pid:none) Homo sapiens cDNA FLJ57554 complet... 52 9e-05
AP008981_1842(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 52 9e-05
BC073276_1(BC073276|pid:none) Xenopus laevis MGC80644 protein, m... 52 9e-05
DQ659249_1(DQ659249|pid:none) Tribolium castaneum chitinase 9 mR... 51 1e-04
AY325895_1(AY325895|pid:none) Tenebrio molitor chitinase precurs... 51 1e-04
EU481149_1(EU481149|pid:none) Caenorhabditis remanei strain PB20... 51 1e-04
AY009149_1(AY009149|pid:none) Ustilago maydis chitinase (CTS1) g... 51 1e-04
CP000853_400(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, ... 51 1e-04
AF026492_1(AF026492|pid:none) Aedes aegypti chitinase (CHT2) gen... 51 2e-04
EU481155_1(EU481155|pid:none) Caenorhabditis remanei strain PB24... 51 2e-04
(Q9ULY4) RecName: Full=Acidic mammalian chitinase; Shor... 50 2e-04
AL356387_3(AL356387|pid:none) Human DNA sequence from clone RP5-... 50 2e-04
AK290702_1(AK290702|pid:none) Homo sapiens cDNA FLJ76132 complet... 50 2e-04
AY825504_1(AY825504|pid:none) Homo sapiens chitinase family prot... 50 2e-04
BC024007_1(BC024007|pid:none) Homo sapiens chitobiase, di-N-acet... 50 2e-04
AL356387_1(AL356387|pid:none) Human DNA sequence from clone RP5-... 50 2e-04
EU481151_1(EU481151|pid:none) Caenorhabditis remanei strain PB21... 50 3e-04
AY789444_1(AY789444|pid:none) Homo sapiens chitinase family prot... 50 3e-04
BC139901_1(BC139901|pid:none) Homo sapiens chitinase, acidic, mR... 50 3e-04
AF337908_1(AF337908|pid:none) Glossina morsitans morsitans chiti... 50 3e-04
AE017355_3165(AE017355|pid:none) Bacillus thuringiensis serovar ... 50 4e-04
EU481152_1(EU481152|pid:none) Caenorhabditis remanei strain PB21... 50 4e-04
AF250997_1(AF250997|pid:none) Wuchereria bancrofti cuticular end... 50 4e-04
AP006840_1790(AP006840|pid:none) Symbiobacterium thermophilum IA... 50 4e-04
CP000557_14(CP000557|pid:none) Geobacillus thermodenitrificans N... 49 5e-04
CP000813_508(CP000813|pid:none) Bacillus pumilus SAFR-032, compl... 49 5e-04
CP001638_17(CP001638|pid:none) Geobacillus sp. WCH70, complete g... 49 5e-04
DQ659247_1(DQ659247|pid:none) Tribolium castaneum chitinase 7 mR... 49 5e-04
EF125543_1(EF125543|pid:none) Tribolium castaneum chitinase 4 (C... 49 5e-04
AE008691_219(AE008691|pid:none) Thermoanaerobacter tengcongensis... 49 6e-04
BC056337_1(BC056337|pid:none) Danio rerio zgc:65788, mRNA (cDNA ... 49 6e-04
CP001176_3280(CP001176|pid:none) Bacillus cereus B4264, complete... 49 6e-04
D87757_1(D87757|pid:none) Mus musculus mRNA for ECF-L precursor,... 49 6e-04
FJ377733_1(FJ377733|pid:none) Isaria fumosorosea chitinase mRNA,... 49 6e-04
EU008333_1(EU008333|pid:none) Bacillus megaterium strain QM B155... 49 8e-04
BC065885_1(BC065885|pid:none) Danio rerio zgc:55941, mRNA (cDNA ... 49 8e-04
BA000004_2292(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 49 8e-04
CP000930_1845(CP000930|pid:none) Heliobacterium modesticaldum Ic... 49 8e-04
BC102931_1(BC102931|pid:none) Bos taurus chitinase, acidic, mRNA... 48 0.001
AY398325_1(AY398325|pid:none) Danio rerio clone RK122A1A05 eosin... 48 0.001
AB046385_1(AB046385|pid:none) Bombyx mori BmChiR1 mRNA for chiti... 48 0.001
AK137503_1(AK137503|pid:none) Mus musculus adult male bone cDNA,... 48 0.001
T24898(T24898)hypothetical protein T13H5.3 - Caenorhabditis eleg... 48 0.001
BC171633_1(BC171633|pid:none) Danio rerio zgc:173927, mRNA (cDNA... 48 0.001
BC054942_1(BC054942|pid:none) Danio rerio zgc:63792, mRNA (cDNA ... 48 0.001
Z66524_11(Z66524|pid:none) Caenorhabditis elegans Cosmid T13H5, ... 48 0.001
FM992689_181(FM992689|pid:none) Candida dubliniensis CD36 chromo... 48 0.001
AM420293_3830(AM420293|pid:none) Saccharopolyspora erythraea NRR... 48 0.001
AB121734_1(AB121734|pid:none) Paralichthys olivaceus fChi3 mRNA ... 48 0.001
CP000817_136(CP000817|pid:none) Lysinibacillus sphaericus C3-41,... 47 0.002
BA000028_791(BA000028|pid:none) Oceanobacillus iheyensis HTE831 ... 47 0.002
EU048546_1(EU048546|pid:none) Morone saxatilis gastric chitinase... 47 0.002
BC153462_1(BC153462|pid:none) Danio rerio zgc:173927, mRNA (cDNA... 47 0.002
CP000448_1810(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 47 0.002
DQ661650_1(DQ661650|pid:none) Bacillus subtilis strain Ap113 chi... 47 0.002
EU251051_1(EU251051|pid:none) Artemia franciscana clone 0NM97.05... 47 0.002
BC090382_1(BC090382|pid:none) Xenopus tropicalis chitinase, acid... 47 0.003
CP000560_17(CP000560|pid:none) Bacillus amyloliquefaciens FZB42,... 47 0.003
DQ316096_1(DQ316096|pid:none) Bacillus sp. DAU101 chitinase (chi... 47 0.003
DQ659251_1(DQ659251|pid:none) Tribolium castaneum chitinase 11 m... 47 0.003
AE013599_3311(AE013599|pid:none) Drosophila melanogaster chromos... 46 0.004
CP000826_2716(CP000826|pid:none) Serratia proteamaculans 568, co... 46 0.004
EF088513_1(EF088513|pid:none) Bacillus amyloliquefaciens strain ... 46 0.004
AM743169_3193(AM743169|pid:none) Stenotrophomonas maltophilia K2... 46 0.004
AY069744_1(AY069744|pid:none) Drosophila melanogaster LP07267 fu... 46 0.005
CP000885_3705(CP000885|pid:none) Clostridium phytofermentans ISD... 46 0.005
BC051070_1(BC051070|pid:none) Mus musculus cDNA sequence BC05107... 46 0.005
AE013599_3312(AE013599|pid:none) Drosophila melanogaster chromos... 46 0.005
FJ465148_1(FJ465148|pid:none) Bacillus licheniformis strain DSM ... 46 0.005
AJ487081_1(AJ487081|pid:none) Tenebrio molitor mRNA for chitinas... 46 0.005
CP000001_3103(CP000001|pid:none) Bacillus cereus E33L, complete ... 45 0.007
AB299018_1(AB299018|pid:none) Monochamus alternatus MaChiA mRNA ... 45 0.007
(Q28542) RecName: Full=Oviduct-specific glycoprotein; AltName: F... 45 0.009
CP000968_717(CP000968|pid:none) Candidatus Korarchaeum cryptofil... 45 0.009
EU822303_1(EU822303|pid:none) Bacillus licheniformis strain MY75... 45 0.009
AB252247_1(AB252247|pid:none) Uncultured bacterium chi14 gene fo... 45 0.009
AE016879_3189(AE016879|pid:none) Bacillus anthracis str. Ames, c... 45 0.009
AE014296_594(AE014296|pid:none) Drosophila melanogaster chromoso... 45 0.009
AB428670_1(AB428670|pid:none) Monochamus alternatus MaChiPm2 mRN... 45 0.009
AB110082_1(AB110082|pid:none) Bacillus ehimensis gene for chitin... 45 0.009
CP000804_230(CP000804|pid:none) Roseiflexus castenholzii DSM 139... 45 0.009
AP006840_1982(AP006840|pid:none) Symbiobacterium thermophilum IA... 45 0.011
DQ859055_1(DQ859055|pid:none) Bacillus pumilus chitinase operon,... 45 0.011
(P29030) RecName: Full=Endochitinase; EC=3.2.1.14; AltN... 45 0.011
AP008230_4848(AP008230|pid:none) Desulfitobacterium hafniense Y5... 45 0.011
T29275(T29275) hypothetical protein T01C4.1 - Caenorhabditis ele... 45 0.011
EU314720_1(EU314720|pid:none) Bacillus licheniformis strain A1 c... 45 0.011
FJ179587_1(FJ179587|pid:none) Hypocrea leucopus strain CBS 12249... 45 0.011
AY705927_1(AY705927|pid:none) Lecanicillium lecanii strain DAOM ... 44 0.015
(O31682) RecName: Full=Putative glycosylase ykvQ; EC=3.... 44 0.015
AF285086_1(AF285086|pid:none) Coniothyrium minitans chitinase (C... 44 0.015
(Q9W5U2) RecName: Full=Probable chitinase 3; EC=3.2.1.1... 44 0.015
EF581163_1(EF581163|pid:none) Bacillus thuringiensis serovar kur... 44 0.020
AF188921_1(AF188921|pid:none) Trichoderma atroviride strain DAOM... 44 0.026
CP000282_3860(CP000282|pid:none) Saccharophagus degradans 2-40, ... 44 0.026
AL009126_1430(AL009126|pid:none) Bacillus subtilis subsp. subtil... 44 0.026
CP000113_2223(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 44 0.026
AF395760_1(AF395760|pid:none) Hypocrea virens endochitinase clas... 44 0.026
AB052914_1(AB052914|pid:none) Bombyx mori chiB mRNA for chitinas... 43 0.033
AF157503_1(AF157503|pid:none) Penaeus monodon chitinase 1 (Chi-1... 43 0.033
AF455139_1(AF455139|pid:none) Bombyx mori chitinase precursor (c... 43 0.033
U86876_1(U86876|pid:none) Bombyx mori chitinase-like protein mRN... 43 0.033
AF326596_1(AF326596|pid:none) Bombyx mandarina chitinase mRNA, c... 43 0.044
AY065557_1(AY065557|pid:none) Mus musculus putative secretory pr... 43 0.044
AF416570_1(AF416570|pid:none) Bacillus cereus strain 28-9 chitin... 43 0.044
DQ993175_1(DQ993175|pid:none) Bacillus thuringiensis serovar mor... 43 0.044
AY618901_1(AY618901|pid:none) Hypocrea lixii putative chitinase ... 43 0.044
AY074882_1(AY074882|pid:none) Bacillus thuringiensis chitinase g... 43 0.044
AE016877_359(AE016877|pid:none) Bacillus cereus ATCC 14579, comp... 43 0.044
EF211999_1(EF211999|pid:none) Bacillus thuringiensis strain BT-7... 43 0.044
AY189740_1(AY189740|pid:none) Bacillus thuringiensis serovar kur... 43 0.044
BT053642_1(BT053642|pid:none) Medicago truncatula clone MTYFT1G-... 43 0.044
BC038354_1(BC038354|pid:none) Homo sapiens chitinase 3-like 1 (c... 43 0.044
DQ512474_1(DQ512474|pid:none) Bacillus thuringiensis serovar col... 43 0.044
(Q91Z98) RecName: Full=Chitinase-3-like protein 4; AltName: Full... 43 0.044
CP001176_373(CP001176|pid:none) Bacillus cereus B4264, complete ... 43 0.044
CP000924_1454(CP000924|pid:none) Thermoanaerobacter pseudethanol... 43 0.044
(P36222) RecName: Full=Chitinase-3-like protein 1; AltName: Full... 43 0.044
AF424979_1(AF424979|pid:none) Bacillus thuringiensis chitinase (... 43 0.044
EU382735_1(EU382735|pid:none) Bubalus bubalis oviductin mRNA, co... 42 0.057
(P36362) RecName: Full=Endochitinase; EC=3.2.1.14; Flag... 42 0.057
AM438314_2(AM438314|pid:none) Vitis vinifera contig VV78X272844.... 42 0.057
CP000232_62(CP000232|pid:none) Moorella thermoacetica ATCC 39073... 42 0.074
CP000764_2129(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 42 0.074
FJ899540_1(FJ899540|pid:none) Agrotis ipsilon chitinase mRNA, co... 42 0.074
DQ482669_1(DQ482669|pid:none) Bubalus bubalis oviductin (OVN) mR... 42 0.074
AY634683_1(AY634683|pid:none) Hypocrea lixii class V chitinase m... 42 0.074
AF188932_1(AF188932|pid:none) Hypocrea rufa strain Hy9 42 kDa en... 42 0.097
CP000485_2915(CP000485|pid:none) Bacillus thuringiensis str. Al ... 42 0.097
AY009150_1(AY009150|pid:none) Candida albicans chitinase (CHT4) ... 42 0.097
CP001407_3334(CP001407|pid:none) Bacillus cereus 03BB102, comple... 42 0.097
EU883591_1(EU883591|pid:none) Litopenaeus vannamei chitinase 1 p... 42 0.097
AB199646_1(AB199646|pid:none) Cycas revoluta crchiA mRNA for chi... 41 0.13
DQ885960_1(DQ885960|pid:none) Chaetomium globosum endochitinase ... 41 0.13
(Q28990) RecName: Full=Oviduct-specific glycoprotein; AltName: F... 41 0.13
BA000043_2418(BA000043|pid:none) Geobacillus kaustophilus HTA426... 41 0.13
CP000875_2736(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 41 0.13
AK314074_1(AK314074|pid:none) Homo sapiens cDNA, FLJ94743, highl... 41 0.17
I38605(I38605)oviductal glycoprotein - human 41 0.17
CP001186_361(CP001186|pid:none) Bacillus cereus G9842, complete ... 41 0.17
U58010_1(U58010|pid:none) Human oviductal glycoprotein (OGP) gen... 41 0.17
AY452507_1(AY452507|pid:none) Bacillus thuringiensis serovar ale... 41 0.17
CP000076_1192(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 41 0.17
CP000485_3072(CP000485|pid:none) Bacillus thuringiensis str. Al ... 41 0.17
AF188928_1(AF188928|pid:none) Trichoderma viride strain BBA 6606... 41 0.17
DQ462415_1(DQ462415|pid:none) Trichoderma sp. w512 chitinase (ec... 41 0.17
(Q12889) RecName: Full=Oviduct-specific glycoprotein; AltName: F... 41 0.17
CP000903_3200(CP000903|pid:none) Bacillus weihenstephanensis KBA... 41 0.17
AY665692_1(AY665692|pid:none) Hypocrea flavoconidia isolate CPK4... 41 0.17
CP001407_3531(CP001407|pid:none) Bacillus cereus 03BB102, comple... 41 0.17
AB208783_1(AB208783|pid:none) Homo sapiens mRNA for Oviduct-spec... 41 0.17
AY665691_1(AY665691|pid:none) Hypocrea flavoconidia isolate CPK4... 41 0.17
AE017194_3596(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 41 0.17
U71214_1(U71214|pid:none) Bacillus licheniformis TP chitinase (C... 41 0.17
AY148807_1(AY148807|pid:none) Lutzomyia longipalpis midgut chiti... 40 0.22
CP000001_3280(CP000001|pid:none) Bacillus cereus E33L, complete ... 40 0.22
(Q5RBP6) RecName: Full=Chitinase-3-like protein 1; Flags: Precur... 40 0.22
AY455290_1(AY455290|pid:none) Bacillus thuringiensis serovar can... 40 0.22
AY292527_1(AY292527|pid:none) Verticillium fungicola chitinase (... 40 0.22
AJ620505_1(AJ620505|pid:none) Lacanobia oleracea mRNA for chitin... 40 0.22
AE016877_3430(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 40 0.22
DQ377564_1(DQ377564|pid:none) Hypocrea lixii isolate T0.01 endoc... 40 0.22
AL024486_17(AL024486|pid:none) Arabidopsis thaliana DNA chromoso... 40 0.22
EU877960_1(EU877960|pid:none) Oncorhynchus mykiss gastric chitin... 40 0.22
CP001176_3564(CP001176|pid:none) Bacillus cereus B4264, complete... 40 0.22
DQ377565_1(DQ377565|pid:none) Hypocrea lixii isolate T50 endochi... 40 0.22
AE016879_3359(AE016879|pid:none) Bacillus anthracis str. Ames, c... 40 0.22
AY452506_1(AY452506|pid:none) Bacillus thuringiensis serovar tou... 40 0.28
AY726548_1(AY726548|pid:none) Ostrinia furnacalis chitinase mRNA... 40 0.28
AY665590_1(AY665590|pid:none) Hypocrea viridescens strain CPK947... 40 0.28
(P36718) RecName: Full=Oviduct-specific glycoprotein; AltName: F... 40 0.28
AF208842_1(AF208842|pid:none) Trichoderma viride chitinase gene,... 40 0.28
DQ377562_1(DQ377562|pid:none) Trichoderma longibrachiatum isolat... 40 0.28
FJ436415_1(FJ436415|pid:none) Mamestra brassicae chitinase mRNA,... 40 0.28
AF484550_1(AF484550|pid:none) Macaca radiata glycoprotein mRNA, ... 40 0.28
AY521455_1(AY521455|pid:none) Mus musculus oviduct-specific glyc... 40 0.28
CP001104_1886(CP001104|pid:none) Eubacterium eligens ATCC 27750,... 40 0.28
AY508698_1(AY508698|pid:none) Mythimna separata chitinase mRNA, ... 40 0.37
CP001160_681(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 40 0.37
EF635427_1(EF635427|pid:none) Trichoderma viride chitinase gene,... 40 0.37
AP008955_1068(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 40 0.37
AB252265_1(AB252265|pid:none) Uncultured bacterium chi32 gene fo... 40 0.37
(P20533) RecName: Full=Chitinase A1; EC=3.2.1.14; Flags... 40 0.37
S51591(S51591;S51632;S43119) chitinase (EC 3.2.1.14) / lysozyme ... 40 0.37
AE004437_630(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 40 0.37
AF188926_1(AF188926|pid:none) Trichoderma asperellum strain GJS ... 40 0.37
AF188925_1(AF188925|pid:none) Trichoderma viride strain Tr6 42 k... 40 0.37
AF154827_1(AF154827|pid:none) Bacillus circulans chitinase (chi4... 40 0.37
AF188924_1(AF188924|pid:none) Trichoderma viride strain ATCC 326... 40 0.37
EF090723_1(EF090723|pid:none) Locusta migratoria manilensis midg... 40 0.37
A72838_1(A72838|pid:none) Sequence 1 from Patent WO9505467. 40 0.37
AF265220_1(AF265220|pid:none) Bacillus circulans chitinase (chi1... 39 0.48
AY189737_1(AY189737|pid:none) Homo sapiens oviductin mRNA, compl... 39 0.48
DQ469637_1(DQ469637|pid:none) Transformation vector pYW220, comp... 39 0.48
U88560_1(U88560|pid:none) Trichoderma hamatum endochitinase gene... 39 0.48
AJ971237_1(AJ971237|pid:none) Crassostrea gigas partial mRNA for... 39 0.48
AJ566281_1(AJ566281|pid:none) Trichoderma atroviride, mRNA for e... 39 0.48
AF188920_1(AF188920|pid:none) Trichoderma atroviride strain DAOM... 39 0.48
AK227762_1(AK227762|pid:none) Arabidopsis thaliana mRNA for puta... 39 0.48
DQ469634_1(DQ469634|pid:none) Transformation vector pYW100b, com... 39 0.48
FJ589787_1(FJ589787|pid:none) Pyrus pyrifolia class V chitinase ... 39 0.48
AY325496_1(AY325496|pid:none) Helicoverpa armigera chitinase mRN... 39 0.63
(Q62010) RecName: Full=Oviduct-specific glycoprotein; AltName: F... 39 0.63
AF188923_1(AF188923|pid:none) Hypocrea rufa strain GJS 89-142 42... 39 0.63
AY665693_1(AY665693|pid:none) Trichoderma viride D isolate CPK99... 39 0.63
BA000004_916(BA000004|pid:none) Bacillus halodurans C-125 DNA, c... 39 0.63
AY665712_1(AY665712|pid:none) Trichoderma pubescens endochitinas... 39 0.63
DQ307192_1(DQ307192|pid:none) Glossina morsitans morsitans clone... 39 0.63
CP001407_368(CP001407|pid:none) Bacillus cereus 03BB102, complet... 39 0.63
EU000575_1(EU000575|pid:none) Bionectria ochroleuca chitinase (C... 39 0.82
AF188931_1(AF188931|pid:none) Hypocrea vinosa 42 kDa endochitina... 39 0.82
AY098731_1(AY098731|pid:none) Choristoneura fumiferana chitinase... 39 0.82
AY674096_1(AY674096|pid:none) Uncultured bacterium clone SIS-23 ... 39 0.82
EU753246_1(EU753246|pid:none) Serratia marcescens strain C8-8 ch... 39 0.82
FJ603061_1(FJ603061|pid:none) Trichoderma atroviride isolate GAU... 39 0.82
AF188918_1(AF188918|pid:none) Hypocrea koningii 42 kDa endochiti... 39 0.82
AY911310_1(AY911310|pid:none) Homo sapiens chitinase family prot... 39 0.82
AC116984_202(AC116984|pid:none) Dictyostelium discoideum chromos... 30 0.84
EF203917_1(EF203917|pid:none) Lecanicillium psalliotae chitinase... 38 1.1
BC137995_1(BC137995|pid:none) Mus musculus oviductal glycoprotei... 38 1.1
AE017355_352(AE017355|pid:none) Bacillus thuringiensis serovar k... 38 1.1
AY674133_1(AY674133|pid:none) Uncultured bacterium clone TBS-08 ... 38 1.1
CU633866_70(CU633866|pid:none) Podospora anserina genomic DNA ch... 38 1.1
AB252252_1(AB252252|pid:none) Uncultured bacterium chi19 gene fo... 38 1.1
CP001283_380(CP001283|pid:none) Bacillus cereus AH820, complete ... 38 1.1
CP000001_349(CP000001|pid:none) Bacillus cereus E33L, complete g... 38 1.1
AE014297_2522(AE014297|pid:none) Drosophila melanogaster chromos... 38 1.4
AY527414_1(AY527414|pid:none) Spodoptera frugiperda chitinase mR... 38 1.4
AY217660_1(AY217660|pid:none) Aspergillus fumigatus strain ATCC ... 38 1.4
AY762599_1(AY762599|pid:none) Sus scrofa signal processing prote... 38 1.4
AE017194_496(AE017194|pid:none) Bacillus cereus ATCC 10987, comp... 38 1.4
AE008691_801(AE008691|pid:none) Thermoanaerobacter tengcongensis... 38 1.4
AJ971238_1(AJ971238|pid:none) Crassostrea gigas mRNA for Chit pr... 38 1.4
AY119021_1(AY119021|pid:none) Drosophila melanogaster LP04696 fu... 38 1.4
AY674125_1(AY674125|pid:none) Uncultured bacterium clone SFBW-13... 38 1.4
AY566865_1(AY566865|pid:none) Serratia marcescens strain NIMA en... 37 1.8
AY433954_1(AY433954|pid:none) Serratia marcescens chitinase A pr... 37 1.8
L38484_1(L38484|pid:none) Serratia marcescens basic 21 kDa chiti... 37 1.8
AP008955_1708(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 37 1.8
AY271350_1(AY271350|pid:none) Aspergillus fumigatus strain YJ-40... 37 1.8
AF399871_1(AF399871|pid:none) Serratia liquefaciens chitinase (c... 37 2.4
AF454462_1(AF454462|pid:none) Serratia marcescens endo-chitinase... 37 2.4
DQ282126_1(DQ282126|pid:none) Sanguibacter sp. C4 chitinase (chi... 37 2.4
AY454339_1(AY454339|pid:none) Coccidioides posadasii chitinase 7... 37 2.4
DQ990373_1(DQ990373|pid:none) Serratia marcescens strain 141 chi... 37 2.4
CP000826_3464(CP000826|pid:none) Serratia proteamaculans 568, co... 37 2.4
CP001160_19(CP001160|pid:none) Thalassiosira pseudonana CCMP1335... 37 2.4
CP000647_1173(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 37 2.4
DQ868535_1(DQ868535|pid:none) Serratia marcescens chitinase B (c... 37 2.4
FJ179592_1(FJ179592|pid:none) Hypocrea nybergiana strain CBS 122... 37 2.4
AB015996_1(AB015996|pid:none) Serratia marcescens gene for chiti... 37 2.4
AY040610_1(AY040610|pid:none) Serratia sp. TU09 chitinase (Chi60... 37 2.4
AP006725_1999(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 37 2.4
EU019911_1(EU019911|pid:none) Serratia marcescens chitinase (chi... 37 2.4
T24072(T24072) hypothetical protein R09D1.1 - Caenorhabditis ele... 37 3.1
AY674121_1(AY674121|pid:none) Uncultured bacterium clone SFBW-05... 37 3.1
DQ165083_1(DQ165083|pid:none) Serratia marcescens Bn10 endochiti... 37 3.1
AE014297_1817(AE014297|pid:none) Drosophila melanogaster chromos... 37 3.1
AB274875_1(AB274875|pid:none) Uncultured bacterium chi gene for ... 36 4.1
T19115(T19115) hypothetical protein C08H9.14 - Caenorhabditis el... 36 4.1
AY674126_1(AY674126|pid:none) Uncultured bacterium clone SFBW-15... 36 4.1
(P07254) RecName: Full=Chitinase A; EC=3.2.1.14; Flags:... 36 4.1
AM270222_6(AM270222|pid:none) Aspergillus niger contig An11c0050... 36 4.1
AY674123_1(AY674123|pid:none) Uncultured bacterium clone SFBW-10... 36 4.1
FN392321_104(FN392321|pid:none) Pichia pastoris GS115 chromosome... 36 4.1
AB274864_1(AB274864|pid:none) Uncultured bacterium chi gene for ... 36 4.1
AF334683_1(AF334683|pid:none) Serratia liquefaciens endochitinas... 36 4.1
CP000675_423(CP000675|pid:none) Legionella pneumophila str. Corb... 36 5.3
AB121733_1(AB121733|pid:none) Paralichthys olivaceus fChi2 mRNA ... 36 5.3
AY674120_1(AY674120|pid:none) Uncultured bacterium clone SFBW-02... 36 5.3
AY665591_1(AY665591|pid:none) Hypocrea rufa strain CBS119326 end... 36 5.3
(Q29411) RecName: Full=Chitinase-3-like protein 1; AltName: Full... 35 6.9
(P11797) RecName: Full=Chitinase B; EC=3.2.1.14; Flags:... 35 6.9
AF188922_1(AF188922|pid:none) Hypocrea rufa strain GJS 89-127 42... 35 6.9
DQ531051_1(DQ531051|pid:none) Trichoderma sp. YMF1.01694 endochi... 35 6.9
EU019912_1(EU019912|pid:none) Serratia marcescens chitinase (chi... 35 6.9
AM113506_1(AM113506|pid:none) Hypocrea virens chit-G1 gene for e... 35 6.9
(Q54NK8) RecName: Full=GPN-loop GTPase 3 homolog; AltName: Full=... 35 9.1
AM910991_170(AM910991|pid:none) Plasmodium knowlesi strain H chr... 35 9.1
CP000927_227(CP000927|pid:none) Caulobacter sp. K31, complete ge... 35 9.1
FJ179593_1(FJ179593|pid:none) Hypocrea pachybasioides strain C.P... 35 9.1
AJ971655_1(AJ971655|pid:none) Nigeriella excavata partial coi ge... 35 9.1
>(Q8R242) RecName: Full=Di-N-acetylchitobiase; EC=3.2.1.-;
Flags: Precursor; &DQ100383_1(DQ100383|pid:none)
&DQ100384_1(DQ100384|pid:none)
Length = 366
Score = 258 bits (660), Expect = 4e-67
Identities = 134/350 (38%), Positives = 204/350 (58%), Gaps = 5/350 (1%)
Frame = +1
Query: 94 CPCDSSYLCEPLQIAPRQEFLGFSLNSTQYPNYYWNQLTTLAIFYETIEDELLCIAHEND 273
CPC + LC+P++ P E F + + +Y W+Q+TT+A F + + EL+C AH
Sbjct: 25 CPCSEAALCQPIRHRPDFEVFVFDVGQKTWKSYDWSQITTVAAFGK-YDPELMCYAHSKG 83
Query: 274 VRLVWGTTFPIENLGNSSYIEEWIQEQIEKVQSTFTDGLNFDVESPITDPTIAQQ-YTEL 450
R+V ++N+ + ++ WI ++++ ++ + DG+N D+E + + + T L
Sbjct: 84 ARVVLKGDISLKNIIDPTFRASWIAQKVDLAKAQYMDGINIDIEQEVNCSSPEYEALTAL 143
Query: 451 VSATNKAFKAINPFYQISIDVAWSPSCIDKRCYDYAGLASNSDFLVAMDYDERSQVFGEK 630
V T ++F+ Q++ DVAWSP IDKRCY+Y G+A DFL M YDE+SQ++ E
Sbjct: 144 VKETTESFQREIEGSQVTFDVAWSPKRIDKRCYNYTGIADACDFLFVMSYDEQSQIWSE- 202
Query: 631 VCTAGANSSPSNALAGINNFTDLGISTDQLVMGLPWYGYIYKNCLNGDEAGLETVVCQIE 810
C A AN+ + L G ++ +GIS +LVMG+PWYGY Y CLN + +C I
Sbjct: 203 -CIAAANAPYNQTLTGYIDYIKMGISPKKLVMGVPWYGYDY-ICLNLSKDD----ICTIT 256
Query: 811 SVPFRGANCSDAAGSEYDYSYLVQLLQDQTINSSAVQWNTEWQSPYFNYIDPITGNVDQV 990
VPFRGA CSDAAG + Y +++ + S QWN + Q+PY+NY DP G QV
Sbjct: 257 KVPFRGAPCSDAAGHQVPYKVIMKQVNGSV---SGSQWNKDQQAPYYNYKDP-AGRFHQV 312
Query: 991 WFDNPQSLSIKVQLAQKLNLRGVAVWNIDFLDFSD----QYNSRPMWDAL 1128
W+DNPQS+S+K + LRG+ +WN + LD+SD + ++ MW AL
Sbjct: 313 WYDNPQSISLKAAYVKNYGLRGIGMWNANCLDYSDDALAREQTQEMWGAL 362
Score = 68.2 bits (165), Expect(2) = 5e-22
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Frame = +3
Query: 1437 QSPYFNYIDPITGNVDQVWFDNPQSLSIKVQLAQKLNLRGVAVWNIDFLDFSD----QYN 1604
Q+PY+NY DP G QVW+DNPQS+S+K + LRG+ +WN + LD+SD +
Sbjct: 296 QAPYYNYKDP-AGRFHQVWYDNPQSISLKAAYVKNYGLRGIGMWNANCLDYSDDALAREQ 354
Query: 1605 SRPMWDAL 1628
++ MW AL
Sbjct: 355 TQEMWGAL 362
Score = 61.6 bits (148), Expect(2) = 5e-22
Identities = 34/76 (44%), Positives = 44/76 (57%)
Frame = +1
Query: 1195 LGISTDQLVMGLPWYGYIYKNCLNGDEAGLETVVCQIESVPFRGANCSDAAGSEYDYSYL 1374
+GIS +LVMG+PWYGY Y CLN + +C I VPFRGA CSDAAG + Y +
Sbjct: 224 MGISPKKLVMGVPWYGYDYI-CLNLSKDD----ICTITKVPFRGAPCSDAAGHQVPYKVI 278
Query: 1375 VQLLQDQTINSSAVQW 1422
++ + S QW
Sbjct: 279 MKQVNGSV---SGSQW 291
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,643,062,633
Number of extensions: 51109683
Number of successful extensions: 119925
Number of sequences better than 10.0: 347
Number of HSP's gapped: 119533
Number of HSP's successfully gapped: 463
Length of query: 601
Length of database: 1,051,180,864
Length adjustment: 134
Effective length of query: 467
Effective length of database: 617,481,958
Effective search space: 288364074386
Effective search space used: 288364074386
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
4 |
| VH (FL, L) |
0 |
| VF (FL, S) |
14 |
| AH (FL, L) |
0 |
| AF (FL, S) |
1 |
| SL (DIR, L) |
1 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
1 |
| CH (FL, L) |
0 |
| CF (FL, S) |
2 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |