NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U16030-1
Contig ID Contig-U16030-1
Contig update 2004. 6.11
Contig sequence 
>Contig-U16030-1 (Contig-U16030-1Q) /CSM_Contig/Contig-U16030-1Q.Seq.d
AAATTCATTTTCAAAACAACAATTCATATATAATAAATAATGGCAGAAAC
AAAAGTTGCACCAAATCTTACTGGTATTGAGCAAACCAAGGCAGGTCAAT
CCTTCACTGAAAAATTATCAGCTGAAGCTATGGAATTTTTCTGTAATGTT
GCCAAATTACCATTCTCACAACAAGCTGTTCACTTTTTGAATGCTTATTG
GGCTGAAGTTAGCAAAGAAGCTGAATTCATCTATTCCGTTGGTTGGGAAA
CAATCAAATATGCTGATATGCATTGCAAAGGTATCCAACTCGTTTTCAAA
TACGATGAAGGTAACGATTTGGATTTCGATATTGCTCTCTATTTCTATGA
ACAATTATGCAAATTCTGTGAAGATCCAAAGAACAAAAACTATGCAACCA
CCTACCCAATCTCTCAACCACAAATGTTGACTGCTCTCAAACGTAAACAA
GAATTAAGAGAAAAAGTCGATGTCAATTTCGATGGTCGTGTCTCTTTCCT
CGAATATCTCTTATATCAATACAAAGATTTCGCCAATCCAGCTGATTTCT
GTACTCGTTCAATGAACCACGATGAACATCCAGAAATCAAAAAAGCTCGT
TTAGCTCTCGAAGAAGTCAACAAACGTATTCGTGCTTACGAAGAAGAAAA
AGCCCGTTTAACCGAAGAATCAAAGATTCCAGGTGTCAAAGGTCTCGGTG
CCACAAACATGCTCGCTCAAATTGATAGTGGTCCATTAAAGGAACAACTC
AACTTTGCCCTTATCTCTGCTGAAGCTGCTGTTCGTACTGCTTCAAAGAA
ATATGGTGGTGCTGCTTATTCAGGTGGTGCTGGTGATGCTGGTGCTGGTT
CCTCTGCTGGTGCCATTTGGTGGATGAATCGTGATTTAGAAGAAAAGAAA
AAGAGATACGGTCCACAAAAGAAATAAATATTCTATTTGCCCGAACAATT
TAATTTGTAAAACAGAATATAAAAATCAAAAAAAAAATTGTAAAAATAAA
ACCTTAAAAAAAAAAAATAATAATAAATATATATTTATTAAAACACTTGG
TGTTTTCATCTGCCATATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA----------AAAAAAAAAAAAAAAAAANNCGGNCCCCNAAAAA
AANNAANNTTTTTTTTGCCCNANCNATTTTNTTTNNNAAACNNAANANNA
AAATCNAAAAAAAAATTGNNAAAATNAACCCCCNAAAAAAAAAAAAAAAA
AAAAAAAAGCTTGT
Gap gap included
Contig length 1254
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 1591933
End point 1590809
Strand (PLUS/MINUS) MINUS
Number of clones 36
Number of EST 47
Link to clone list U16030
List of clone(s) 

est1=SHK572E,1,1002
est2=VFL541F,2,508
est3=SFD875F,3,525
est4=SFF690E,7,1058
est5=SHI591F,7,612
est6=VFE805F,7,524
est7=VFK771F,7,532
est8=CFD553F,9,527
est9=VFH678E,9,968
est10=VFM761F,10,615
est11=VHE736E,13,855
est12=VHN133F,14,613
est13=SHD143E,18,1002
est14=VSI777E,19,1005
est15=FC-IC0150F,22,555
est16=FC-IC1559F,23,556
est17=FC-IC1559Z,23,555
est18=VFJ688F,28,616
est19=VFM861F,31,579
est20=VSI511F,32,475
est21=SLJ277F,37,289
est22=SLD534F,43,256
est23=FC-AZ05F,44,497
est24=VSD421E,44,986
est25=VSI346F,53,616
est26=SLD631F,202,496
est27=VHA660Z,250,1002
est28=SLG242F,384,911
est29=VSC819Z,416,978
est30=FC-AW12Z,477,1095
est31=VFM761Z,521,1047
est32=VFJ688Z,528,941
est33=SLG528F,549,967
est34=FC-AZ05Z,573,1102
est35=VFE805Z,637,1058
est36=VFL541Z,640,1058
est37=VHN133Z,644,1061
est38=VSI346Z,650,986
est39=SLD631Z,766,1005
est40=VFK771Z,786,1061
est41=VSI511Z,786,1023
est42=FC-IC1499F,790,1041
est43=SLJ821E,791,1005
est44=SLD534Z,828,1070
est45=SLF787Z,935,1106
est46=SFD875Z,965,1080
est47=FC-IC1499Z,1107,1254
Translated Amino Acid sequence 
nsfskqqfiynk*wqkqklhqillvlskprqvnpslknyqlklwnfsvmlpnyhshnklf
tf*mliglklakklnssiplvgkqsnmliciakvsnsfsntmkvtiwisillsismnnya
nsvkiqrtktmqpptqslnhkc*llsnvnkn*ekksmsismvvslssnisyintkispiq
lisvlvq*ttmniqkskklv*lskkstnvfvltkkkkpv*pknqrfqvskvsvpqtcslk
livvh*rnnstlplsllkllfvllqrnmvvlliqvvlvmlvlvpllvpfgg*ivi*KKRK
RDTVHKRNKYSICPNNLICKTEYKNQKKNCKNKTLKKKNNNKYIFIKTLGVFICHIKKKK
KKKKKKKK---

---KKKKKKXGPXKKXXFFLPXXFXXXNXXXKSKKKLXKXTPXKKKKKKKSL
Translated Amino Acid sequence (All Frames) 
Frame A:
kfifkttihi**imaetkvapnltgieqtkagqsfteklsaeameffcnvaklpfsqqav
hflnaywaevskeaefiysvgwetikyadmhckgiqlvfkydegndldfdialyfyeqlc
kfcedpknknyattypisqpqmltalkrkqelrekvdvnfdgrvsfleyllyqykdfanp
adfctrsmnhdehpeikkarlaleevnkrirayeeekarlteeskipgvkglgatnmlaq
idsgplkeqlnfalisaeaavrtaskkyggaaysggagdagagssagaiwwmnrdleekk
krygpqkk*ifylpeqfnl*nri*kskkkl*k*nlkkkk***iyiy*ntwcfhlpykkkk
kkkkkkkk---

---KKKKKKXGPXKKXXFFLPXXFXXXNXXXKSKKKLXKXTPXKKKKKKKSL

Frame B:
nsfskqqfiynk*wqkqklhqillvlskprqvnpslknyqlklwnfsvmlpnyhshnklf
tf*mliglklakklnssiplvgkqsnmliciakvsnsfsntmkvtiwisillsismnnya
nsvkiqrtktmqpptqslnhkc*llsnvnkn*ekksmsismvvslssnisyintkispiq
lisvlvq*ttmniqkskklv*lskkstnvfvltkkkkpv*pknqrfqvskvsvpqtcslk
livvh*rnnstlplsllkllfvllqrnmvvlliqvvlvmlvlvpllvpfgg*ivi*KKRK
RDTVHKRNKYSICPNNLICKTEYKNQKKNCKNKTLKKKNNNKYIFIKTLGVFICHIKKKK
KKKKKKKK---

---kkkkkxxxpxkxxxffcpxxfxxxtxxxnxkknxxnxppkkkkkkkkac

Frame C:
ihfqnnnsyiinngrnksctksywy*anqgrsilh*kiis*sygifl*ccqitilttscs
lfecllg*s*qrs*ihlfrwlgnnqic*yalqryptrfqir*r*rfgfrycslfl*timq
il*rskeqklcnhlpnlsttnvdcsqt*trikrksrcqfrwsclfprislisiqrfrqss
*flysfnepr*tsrnqkssfssrrsqqtysclrrrkspfnrrikdsrcqrsrchkharsn
**wsikgttqlcpylc*sccsycfkeiwwcclfrwcw*cwcwflcwchlvdes*frrkek
eirstkeinilfarti*fvkqnikikkkivkikp*kkkiiiniyllkhlvfssai*kkkk
kkkkkkkk---

---kkkkkxrxpkkxxxffaxxixfxkxxxkixkkixkxnpxkkkkkkkkl
own update 2004. 6.23
Homology vs CSM-cDNA 
Query= Contig-U16030-1 (Contig-U16030-1Q)
/CSM_Contig/Contig-U16030-1Q.Seq.d
         (1264 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U16030-1 (Contig-U16030-1Q) /CSM_Contig/Conti...  1588  0.0
Contig-U15732-1 (Contig-U15732-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U09480-1 (Contig-U09480-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U15610-1 (Contig-U15610-1Q) /CSM_Contig/Conti...    38  0.032
Contig-U16413-1 (Contig-U16413-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U15061-1 (Contig-U15061-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U12916-1 (Contig-U12916-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U15747-1 (Contig-U15747-1Q) /CSM_Contig/Conti...    34  0.50
Contig-U15225-1 (Contig-U15225-1Q) /CSM_Contig/Conti...    34  0.50
Contig-U15134-1 (Contig-U15134-1Q) /CSM_Contig/Conti...    34  0.50

>Contig-U16030-1 (Contig-U16030-1Q) /CSM_Contig/Contig-U16030-1Q.Seq.d
          Length = 1264

 Score = 1588 bits (801), Expect = 0.0
 Identities = 801/801 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaattcattttcaaaacaacaattcatatataataaataatggcagaaacaaaagttgca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aaattcattttcaaaacaacaattcatatataataaataatggcagaaacaaaagttgca 60

                                                                       
Query: 61  ccaaatcttactggtattgagcaaaccaaggcaggtcaatccttcactgaaaaattatca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ccaaatcttactggtattgagcaaaccaaggcaggtcaatccttcactgaaaaattatca 120

                                                                       
Query: 121 gctgaagctatggaatttttctgtaatgttgccaaattaccattctcacaacaagctgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctgaagctatggaatttttctgtaatgttgccaaattaccattctcacaacaagctgtt 180

                                                                       
Query: 181 cactttttgaatgcttattgggctgaagttagcaaagaagctgaattcatctattccgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cactttttgaatgcttattgggctgaagttagcaaagaagctgaattcatctattccgtt 240

                                                                       
Query: 241 ggttgggaaacaatcaaatatgctgatatgcattgcaaaggtatccaactcgttttcaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggttgggaaacaatcaaatatgctgatatgcattgcaaaggtatccaactcgttttcaaa 300

                                                                       
Query: 301 tacgatgaaggtaacgatttggatttcgatattgctctctatttctatgaacaattatgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tacgatgaaggtaacgatttggatttcgatattgctctctatttctatgaacaattatgc 360

                                                                       
Query: 361 aaattctgtgaagatccaaagaacaaaaactatgcaaccacctacccaatctctcaacca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaattctgtgaagatccaaagaacaaaaactatgcaaccacctacccaatctctcaacca 420

                                                                       
Query: 421 caaatgttgactgctctcaaacgtaaacaagaattaagagaaaaagtcgatgtcaatttc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caaatgttgactgctctcaaacgtaaacaagaattaagagaaaaagtcgatgtcaatttc 480

                                                                       
Query: 481 gatggtcgtgtctctttcctcgaatatctcttatatcaatacaaagatttcgccaatcca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatggtcgtgtctctttcctcgaatatctcttatatcaatacaaagatttcgccaatcca 540

                                                                       
Query: 541 gctgatttctgtactcgttcaatgaaccacgatgaacatccagaaatcaaaaaagctcgt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gctgatttctgtactcgttcaatgaaccacgatgaacatccagaaatcaaaaaagctcgt 600

                                                                       
Query: 601 ttagctctcgaagaagtcaacaaacgtattcgtgcttacgaagaagaaaaagcccgttta 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttagctctcgaagaagtcaacaaacgtattcgtgcttacgaagaagaaaaagcccgttta 660

                                                                       
Query: 661 accgaagaatcaaagattccaggtgtcaaaggtctcggtgccacaaacatgctcgctcaa 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 accgaagaatcaaagattccaggtgtcaaaggtctcggtgccacaaacatgctcgctcaa 720

                                                                       
Query: 721 attgatagtggtccattaaaggaacaactcaactttgcccttatctctgctgaagctgct 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 attgatagtggtccattaaaggaacaactcaactttgcccttatctctgctgaagctgct 780

                                
Query: 781 gttcgtactgcttcaaagaaa 801
           |||||||||||||||||||||
Sbjct: 781 gttcgtactgcttcaaagaaa 801


 Score =  212 bits (107), Expect = 1e-54
 Identities = 107/107 (100%)
 Strand = Plus / Plus

                                                                       
Query: 864 catttggtggatgaatcgtgatttagaagaaaagaaaaagagatacggtccacaaaagaa 923
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 catttggtggatgaatcgtgatttagaagaaaagaaaaagagatacggtccacaaaagaa 923

                                                          
Query: 924 ataaatattctatttgcccgaacaatttaatttgtaaaacagaatat 970
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 ataaatattctatttgcccgaacaatttaatttgtaaaacagaatat 970


 Score =  101 bits (51), Expect = 3e-21
 Identities = 51/51 (100%)
 Strand = Plus / Plus

                                                               
Query: 1018 taataataaatatatatttattaaaacacttggtgttttcatctgccatat 1068
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 taataataaatatatatttattaaaacacttggtgttttcatctgccatat 1068


 Score = 40.1 bits (20), Expect = 0.008
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1021 taataaatatatatttatta 1040
            ||||||||||||||||||||
Sbjct: 1040 taataaatatatatttatta 1021


>Contig-U15732-1 (Contig-U15732-1Q) /CSM_Contig/Contig-U15732-1Q.Seq.d
          Length = 2133

 Score = 42.1 bits (21), Expect = 0.002
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 26 atatataataaataatggcagaaacaaaa 54
          ||||||||||||||||| ||||| |||||
Sbjct: 43 atatataataaataatgtcagaaccaaaa 71


>Contig-U09480-1 (Contig-U09480-1Q) /CSM_Contig/Contig-U09480-1Q.Seq.d
          Length = 715

 Score = 40.1 bits (20), Expect = 0.008
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 30 ataataaataatggcagaaa 49
          ||||||||||||||||||||
Sbjct: 40 ataataaataatggcagaaa 59


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,533
Number of Sequences: 8402
Number of extensions: 17533
Number of successful extensions: 1981
Number of sequences better than 10.0: 237
length of query: 1264
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1248
effective length of database: 7,941,110
effective search space: 9910505280
effective search space used: 9910505280
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 3. 8
Homology vs DNA 
Query= Contig-U16030-1 (Contig-U16030-1Q) /CSM_Contig/Contig-U16030-1Q.Seq.d
         (1264 letters)

Database: ddbj_B
           98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(M58022) Dictyostelium 30,000 dalton actin bundling protein ...  1515   0.0    1
(Z50156) D.discoideum gene for 34 kD actin binding protein.      1429   0.0    1
(U32112) Dictyostelium discoideum 34 kDa actin binding prote...  1429   0.0    1
(BJ397271) Dictyostelium discoideum cDNA clone:dds45o17, 5' ...  1265   0.0    1
(BJ393150) Dictyostelium discoideum cDNA clone:dds30e11, 5' ...  1229   0.0    1
(BJ396213) Dictyostelium discoideum cDNA clone:dds41e23, 5' ...  1201   0.0    1
(BJ416500) Dictyostelium discoideum cDNA clone:ddv26j15, 5' ...  1199   0.0    1
(BJ425830) Dictyostelium discoideum cDNA clone:ddv57a09, 5' ...  1183   0.0    1
(BJ420756) Dictyostelium discoideum cDNA clone:ddv40h09, 5' ...  1181   0.0    1
(BJ414950) Dictyostelium discoideum cDNA clone:ddv20o22, 5' ...  1166   0.0    1
(BJ387195) Dictyostelium discoideum cDNA clone:dds12c24, 5' ...  1136   0.0    1
(AU268547) Dictyostelium discoideum vegetative cDNA clone:VS...  1110   0.0    1
(BJ436900) Dictyostelium discoideum cDNA clone:ddv32g16, 3' ...  1092   0.0    1
(BJ434446) Dictyostelium discoideum cDNA clone:ddv16k20, 3' ...  1088   0.0    1
(BJ413765) Dictyostelium discoideum cDNA clone:ddv16k20, 5' ...  1080   0.0    2
(BJ405000) Dictyostelium discoideum cDNA clone:dds30e11, 3' ...  1074   0.0    2
(BJ408401) Dictyostelium discoideum cDNA clone:dds45o17, 3' ...  1063   0.0    3
(BJ416501) Dictyostelium discoideum cDNA clone:ddv26j16, 5' ...  1068   0.0    1
(AU271375) Dictyostelium discoideum gamete cDNA clone:FC-IC0...  1053   0.0    1
(AU269215) Dictyostelium discoideum vegetative cDNA clone:VS...  1051   0.0    1
(AU275079) Dictyostelium discoideum gamete cDNA clone:FC-IC1...  1043   0.0    1
(BJ415474) Dictyostelium discoideum cDNA clone:ddv22n17, 5' ...  1041   0.0    1
(BJ388286) Dictyostelium discoideum cDNA clone:dds8f20, 5' e...  1037   0.0    1
(BJ409815) Dictyostelium discoideum cDNA clone:ddv10j02, 5' ...  1025   0.0    1
(BJ360929) Dictyostelium discoideum cDNA clone:ddc8i13, 5' e...  1013   0.0    1
(AU264000) Dictyostelium discoideum vegetative cDNA clone:VS...  1009   0.0    1
(BJ415936) Dictyostelium discoideum cDNA clone:ddv24a11, 5' ...   930   0.0    1
(AU262812) Dictyostelium discoideum vegetative cDNA clone:VS...   702   0.0    3
(AU264001) Dictyostelium discoideum vegetative cDNA clone:VS...   728   0.0    2
(AU275078) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   418   0.0    5
(AU268807) Dictyostelium discoideum vegetative cDNA clone:VS...   878   0.0    1
(AU061824) Dictyostelium discoideum slug cDNA, clone SLG242.      591   0.0    3
(AU284452) Dictyostelium discoideum gamete cDNA clone:FC-AW1...   529   0.0    6
(AU284486) Dictyostelium discoideum gamete cDNA clone:FC-AZ0...   848   0.0    1
(BJ439403) Dictyostelium discoideum cDNA clone:ddv40h09, 3' ...   844   0.0    1
(AU269216) Dictyostelium discoideum vegetative cDNA clone:VS...   327   0.0    3
(AU284487) Dictyostelium discoideum gamete cDNA clone:FC-AZ0...   464   0.0    4
(BJ398522) Dictyostelium discoideum cDNA clone:dds12c24, 3' ...   502   0.0    3
(AU061896) Dictyostelium discoideum slug cDNA, clone SLG528.      486   0.0    2
(AU061258) Dictyostelium discoideum slug cDNA, clone SLD631.      585   e-162  1
(BJ435274) Dictyostelium discoideum cDNA clone:ddv26j15, 3' ...   404   e-152  3
(AU060334) Dictyostelium discoideum slug cDNA, clone SLJ277.      502   e-137  1
(BJ427935) Dictyostelium discoideum cDNA clone:ddv10j02, 3' ...   276   e-126  3
(AU268548) Dictyostelium discoideum vegetative cDNA clone:VS...   278   e-117  2
(AU061205) Dictyostelium discoideum slug cDNA, clone SLD534.      424   e-114  1
(BJ434560) Dictyostelium discoideum cDNA clone:ddv24a11, 3' ...   210   4e-92  3
(BJ433159) Dictyostelium discoideum cDNA clone:ddv20o22, 3' ...   270   7e-82  2
(BJ444712) Dictyostelium discoideum cDNA clone:ddv57a09, 3' ...   184   6e-78  3
(AU052569) Dictyostelium discoideum slug cDNA, clone SLD534.      212   8e-68  3
(AU052627) Dictyostelium discoideum slug cDNA, clone SLD631.      212   2e-65  2
(AU272541) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   212   5e-53  2
(AU053861) Dictyostelium discoideum slug cDNA, clone SLJ821.      212   1e-50  2
(AU263538) Dictyostelium discoideum vegetative cDNA clone:VS...   212   2e-50  1
(AU263528) Dictyostelium discoideum vegetative cDNA clone:VS...   206   1e-48  1
(AU263539) Dictyostelium discoideum vegetative cDNA clone:VS...   105   3e-40  2
(BJ433701) Dictyostelium discoideum cDNA clone:ddv22n17, 3' ...   117   6e-40  2
(AM782379) Nicotiana tabacum EST, clone nt002126064.               58   9e-33  5
(BQ762314) EBro01_SQ005_O08 _R root, 3 week, hydroponic grow...   131   4e-31  3
(AU263529) Dictyostelium discoideum vegetative cDNA clone:VS...    92   3e-24  2
(CI764146) Oryza sativa Japonica Group cDNA, clone: J10B0038...    62   6e-21  4
(AJ879845) Uncultured organism EST, clone ASt-7.                   68   1e-16  3
(BJ409449) Dictyostelium discoideum cDNA clone:dds41e23, 3' ...   100   2e-16  1
(AU053136) Dictyostelium discoideum slug cDNA, clone SLF787.       62   6e-16  3
(AU268808) Dictyostelium discoideum vegetative cDNA clone:VS...    88   9e-13  1
(AM806108) Nicotiana tabacum EST, clone nt002018079.               54   1e-10  3
(BJ400101) Dictyostelium discoideum cDNA clone:dds8f20, 3' e...    62   7e-08  2
(CF431929) NIT1_11_A09.g1_A002 Nitrogen-deficient seedlings ...    56   0.003  1
(L08067) Physarum polycephalum actin bundling protein, 3' end.     36   0.006  4
(AC149423) Phakopsora pachyrhizi clone JGIAFNA-77J19, comple...    36   0.066  4
(EC854505) HDE00001077 Hyperamoeba dachnaya Non-normalized (...    38   0.096  3
(AC188842) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB...    40   0.13   7
(DQ100186) Purshia tridentata voucher S1 acetyl-coA carboxyl...    50   0.20   1
(DQ100185) Purshia tridentata voucher 20A acetyl-coA carboxy...    50   0.20   1
(DQ100184) Purshia tridentata voucher 23-2 acetyl-coA carbox...    50   0.20   1
(DQ100183) Purshia tridentata voucher 1-1 acetyl-coA carboxy...    50   0.20   1
(DQ100182) Purshia tridentata voucher B24 acetyl-coA carboxy...    50   0.20   1
(DQ100181) Purshia tridentata voucher B23 acetyl-coA carboxy...    50   0.20   1
(DQ100180) Purshia tridentata voucher B18 acetyl-coA carboxy...    50   0.20   1
(DQ100179) Purshia tridentata voucher B21 acetyl-coA carboxy...    50   0.20   1
(DQ100178) Purshia tridentata voucher B20 acetyl-coA carboxy...    50   0.20   1
(DQ100177) Purshia tridentata voucher 10-3 acetyl-coA carbox...    50   0.20   1
(DQ100176) Purshia tridentata voucher 8A acetyl-coA carboxyl...    50   0.20   1
(DQ100175) Purshia tridentata voucher B3-1 acetyl-coA carbox...    50   0.20   1
(DQ100174) Purshia tridentata voucher B13-1 acetyl-coA carbo...    50   0.20   1
(DQ100173) Purshia tridentata voucher B11-3 acetyl-coA carbo...    50   0.20   1
(DQ100172) Purshia tridentata voucher B1-1 acetyl-coA carbox...    50   0.20   1
(DQ100171) Purshia tridentata voucher 30-3 acetyl-coA carbox...    50   0.20   1
(AC164485) Bos taurus clone CH240-151B11, WORKING DRAFT SEQU...    50   0.20   1
(CU062450) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   0.43   2
(BX682233) Zebrafish DNA sequence from clone CH211-177P5 in ...    48   0.81   1
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s...    48   0.81   1
(AC159059) Bos taurus clone CH240-60A5, WORKING DRAFT SEQUEN...    48   0.81   1
(AC181386) Strongylocentrotus purpuratus clone R3-1114A18, W...    48   0.81   1
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet...    48   0.81   1
(CP000939) Clostridium botulinum B1 str. Okra, complete genome.    48   0.81   1
(CP000743) Methanococcus aeolicus Nankai-3, complete genome.       48   0.81   1
(CP000728) Clostridium botulinum F str. Langeland, complete ...    48   0.81   1
(CP000727) Clostridium botulinum A str. Hall, complete genome.     48   0.81   1
(CP000726) Clostridium botulinum A str. ATCC 19397, complete...    48   0.81   1
(EK052938) 1092959723942 Global-Ocean-Sampling_GS-31-01-01-1...    44   0.95   2
(AE014852) Plasmodium falciparum 3D7 chromosome 12, section ...    34   1.6    2
(AC006279) Plasmodium falciparum chromosome 12 clone PFYAC61...    34   1.6    2
(EU004203) Saccharomyces cerevisiae YJM789 mitochondrion, co...    32   1.7    2
(AJ011856) Saccharomyces cerevisiae complete mitochondrial g...    32   1.7    2
(AC178553) Strongylocentrotus purpuratus clone R3-3027H8, WO...    38   1.9    5
(AC129067) Rattus norvegicus strain Brown Norway clone RP31-...    40   1.9    5
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ...    32   2.2    8
(AY048187) Bombyx mori strain Xiafang mitochondrion, complet...    38   2.3    3
(BJ423681) Dictyostelium discoideum cDNA clone:ddv50e03, 5' ...    42   2.4    2
(BJ424790) Dictyostelium discoideum cDNA clone:ddv53h16, 5' ...    42   2.4    2
(BJ423390) Dictyostelium discoideum cDNA clone:ddv49e03, 5' ...    42   2.4    2
(BJ394602) Dictyostelium discoideum cDNA clone:dds35f23, 5' ...    42   2.4    2
(T64171) yc47e12.s1 Stratagene liver (#937224) Homo sapiens ...    44   2.4    2
(BJ394880) Dictyostelium discoideum cDNA clone:dds36g20, 5' ...    42   2.5    2
(BJ392495) Dictyostelium discoideum cDNA clone:dds27i23, 5' ...    42   2.6    2
(BJ422834) Dictyostelium discoideum cDNA clone:ddv47n06, 5' ...    42   2.6    2
(BJ425206) Dictyostelium discoideum cDNA clone:ddv54p21, 5' ...    42   2.6    2
(BJ396074) Dictyostelium discoideum cDNA clone:dds41d09, 5' ...    42   2.6    2
(BJ417906) Dictyostelium discoideum cDNA clone:ddv31b06, 5' ...    42   2.6    2
(BJ370138) Dictyostelium discoideum cDNA clone:ddc53e03, 5' ...    42   2.7    2
(BJ391796) Dictyostelium discoideum cDNA clone:dds25a11, 5' ...    42   2.7    2
(BJ393296) Dictyostelium discoideum cDNA clone:dds30h20, 5' ...    42   2.7    2
(BJ418208) Dictyostelium discoideum cDNA clone:ddv32b05, 5' ...    42   2.7    2
(BJ427490) Dictyostelium discoideum cDNA clone:ddv62h17, 5' ...    42   2.8    2
(BJ395739) Dictyostelium discoideum cDNA clone:dds40a03, 5' ...    42   2.8    2
(AG420132) Mus musculus molossinus DNA, clone:MSMg01-291A04....    40   3.0    2
(AM486030) Vitis vinifera contig VV78X098611.2, whole genome...    34   3.1    4
(CR854829) Zebrafish DNA sequence from clone DKEY-285B23 in ...    46   3.2    1
(AM465480) Vitis vinifera, whole genome shotgun sequence, co...    46   3.2    1
(AM446335) Vitis vinifera contig VV78X216922.15, whole genom...    46   3.2    1
(DJ051118) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M...    46   3.2    1
(DI106547) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M...    46   3.2    1
(CS083976) Sequence 159 from Patent WO2005040377.                  46   3.2    1
(AE014848) Plasmodium falciparum 3D7 chromosome 12, section ...    46   3.2    1
(AC068138) Homo sapiens BAC clone RP11-813K12 from 2, comple...    46   3.2    1
(AC152225) Bos taurus clone CH240-6G9, WORKING DRAFT SEQUENC...    46   3.2    1
(CT027838) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    46   3.2    1
(AC004153) Plasmodium falciparum chromosome 12 clone PFYAC81...    46   3.2    1
(CU971683) Brassica napus GSS, clone JBnB091K14, end read, p...    46   3.2    1
(AG693909) Macaca fuscata fuscata DNA, clone: MSB2-129B14_F,...    46   3.2    1
(EL916013) INIT2_98_C08.g1_A006 G5 trophont cDNA (INIT2) Ich...    46   3.2    1
(EL915514) INIT2_91_G02.g2_A006 G5 trophont cDNA (INIT2) Ich...    46   3.2    1
(EL914391) INIT2_72_G04.g2_A006 G5 trophont cDNA (INIT2) Ich...    46   3.2    1
(EL912225) INIT2_50_F07.g1_A006 G5 trophont cDNA (INIT2) Ich...    46   3.2    1
(EL911134) INIT2_44_C08.b1_A006 G5 trophont cDNA (INIT2) Ich...    46   3.2    1
(EL910776) INIT2_41_F08.g1_A006 G5 trophont cDNA (INIT2) Ich...    46   3.2    1
(EL910738) INIT2_41_C01.g1_A006 G5 trophont cDNA (INIT2) Ich...    46   3.2    1
(EL910695) INIT2_41_F08.b1_A006 G5 trophont cDNA (INIT2) Ich...    46   3.2    1
(EL909763) INIT2_34_B09.g1_A006 G5 trophont cDNA (INIT2) Ich...    46   3.2    1
(EL908713) INIT2_26_F08.g1_A006 G5 trophont cDNA (INIT2) Ich...    46   3.2    1
(EL906971) INIT2_15_D06.g1_A006 G5 trophont cDNA (INIT2) Ich...    46   3.2    1
(DY735070) EST_ssal_rgb2_90809 ssalrgb2 mixed_tissue Salmo s...    46   3.2    1
(AU087369) Plasmodium falciparum 3D7 cDNA clone from Sugano ...    46   3.2    1
(CP000817) Lysinibacillus sphaericus C3-41, complete genome.       46   3.2    1
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)...    46   3.2    1
(EU557673) Solanum lycopersicum FAS protein (fasciated) gene...    38   4.5    4
(AC171736) Solanum lycopersicum chromosome 11 clone C11HBa03...    38   4.5    4
(DX551782) GH_MBb0078M13r GH_MBb Gossypium hirsutum genomic ...    38   4.6    2
(EX481226) EST_lsal_evj_791598 lsalevj mixed_tissue_mixed_st...    34   4.8    2
(AC005504) Plasmodium falciparum chromosome 12, *** SEQUENCI...    32   4.9    7
(CD835864) BN45.046P06F011229 BN45 Brassica napus cDNA clone...    32   5.5    3
(GD180856) Ferret_002_A06 Ferret library from spleen, liver,...    38   5.7    2
(AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7...    32   5.8    2
(AC106203) Rattus norvegicus clone CH230-27C8, *** SEQUENCIN...    34   5.8    2
(AC012065) Homo sapiens BAC clone RP11-130L8 from 2, complet...    32   5.9    2
(AC125810) Rattus norvegicus clone CH230-345P21, WORKING DRA...    34   5.9    2
(BX294660) Zebrafish DNA sequence from clone CH211-234D4 in ...    32   5.9    2
(AC019034) Homo sapiens clone RP11-24C12, WORKING DRAFT SEQU...    32   5.9    2
(AC182770) Cavia porcellus clone CH234-460H21, WORKING DRAFT...    32   5.9    2
(AC188477) Cavia porcellus clone CH234-506B2, WORKING DRAFT ...    32   6.0    2
(AM480752) Vitis vinifera contig VV78X090516.7, whole genome...    38   6.6    4
(DV112880) CV03004A2H06.f1 CV03-normalized library Euphorbia...    34   6.7    2
(DV114462) CV03008B2H01.f1 CV03-normalized library Euphorbia...    34   6.7    2
(BX231675) Danio rerio genomic clone DKEY-52F22, genomic sur...    32   7.6    4
(CE241209) tigr-gss-dog-17000333433209 Dog Library Canis lup...    40   7.7    2
(AG361182) Mus musculus molossinus DNA, clone:MSMg01-161O08....    34   7.9    2
(AL748651) Danio rerio genomic clone DKEY-11J16, genomic sur...    42   7.9    2
(DX164438) OR_ABa0020D14.f OR_ABa Oryza ridleyi genomic clon...    32   8.1    2
(BI505561) BB170027B10A07.5 Bee Brain Normalized/Subtracted ...    32   8.1    2
(DB749208) Apis mellifera head cDNA, RIKEN full-length enric...    32   8.2    2
(DB746606) Apis mellifera head cDNA, RIKEN full-length enric...    32   8.2    2
(ET480408) fcg2x.pk372.e11 C. graminicola genomic sequence G...    34   8.2    2
(BX936418) Zebrafish DNA sequence from clone CH211-157C24 in...    38   9.0    5
(CU633944) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   9.2    5
(CU329698) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   9.3    4
(CX199185) yde75b01.y1 Sea urchin EST Lib1 Strongylocentrotu...    38   9.5    2
(DB770422) Apis mellifera head cDNA, RIKEN full-length enric...    34   9.7    3

>(M58022) Dictyostelium 30,000 dalton actin bundling protein mRNA,
           complete cds.
          Length = 1032

 Score = 1515 bits (764), Expect = 0.0
 Identities = 764/764 (100%)
 Strand = Plus / Plus


Query: 40  atggcagaaacaaaagttgcaccaaatcttactggtattgagcaaaccaaggcaggtcaa 99
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4   atggcagaaacaaaagttgcaccaaatcttactggtattgagcaaaccaaggcaggtcaa 63


Query: 100 tccttcactgaaaaattatcagctgaagctatggaatttttctgtaatgttgccaaatta 159
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  tccttcactgaaaaattatcagctgaagctatggaatttttctgtaatgttgccaaatta 123


Query: 160 ccattctcacaacaagctgttcactttttgaatgcttattgggctgaagttagcaaagaa 219
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ccattctcacaacaagctgttcactttttgaatgcttattgggctgaagttagcaaagaa 183


Query: 220 gctgaattcatctattccgttggttgggaaacaatcaaatatgctgatatgcattgcaaa 279
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gctgaattcatctattccgttggttgggaaacaatcaaatatgctgatatgcattgcaaa 243


Query: 280 ggtatccaactcgttttcaaatacgatgaaggtaacgatttggatttcgatattgctctc 339
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ggtatccaactcgttttcaaatacgatgaaggtaacgatttggatttcgatattgctctc 303


Query: 340 tatttctatgaacaattatgcaaattctgtgaagatccaaagaacaaaaactatgcaacc 399
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tatttctatgaacaattatgcaaattctgtgaagatccaaagaacaaaaactatgcaacc 363


Query: 400 acctacccaatctctcaaccacaaatgttgactgctctcaaacgtaaacaagaattaaga 459
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 acctacccaatctctcaaccacaaatgttgactgctctcaaacgtaaacaagaattaaga 423


Query: 460 gaaaaagtcgatgtcaatttcgatggtcgtgtctctttcctcgaatatctcttatatcaa 519
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gaaaaagtcgatgtcaatttcgatggtcgtgtctctttcctcgaatatctcttatatcaa 483


Query: 520 tacaaagatttcgccaatccagctgatttctgtactcgttcaatgaaccacgatgaacat 579
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tacaaagatttcgccaatccagctgatttctgtactcgttcaatgaaccacgatgaacat 543


Query: 580 ccagaaatcaaaaaagctcgtttagctctcgaagaagtcaacaaacgtattcgtgcttac 639
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ccagaaatcaaaaaagctcgtttagctctcgaagaagtcaacaaacgtattcgtgcttac 603


Query: 640 gaagaagaaaaagcccgtttaaccgaagaatcaaagattccaggtgtcaaaggtctcggt 699
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gaagaagaaaaagcccgtttaaccgaagaatcaaagattccaggtgtcaaaggtctcggt 663


Query: 700 gccacaaacatgctcgctcaaattgatagtggtccattaaaggaacaactcaactttgcc 759
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gccacaaacatgctcgctcaaattgatagtggtccattaaaggaacaactcaactttgcc 723


Query: 760 cttatctctgctgaagctgctgttcgtactgcttcaaagaaata 803
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 cttatctctgctgaagctgctgttcgtactgcttcaaagaaata 767

 Score =  212 bits (107), Expect(3) = 2e-66
 Identities = 107/107 (100%)
 Strand = Plus / Plus


Query: 864 catttggtggatgaatcgtgatttagaagaaaagaaaaagagatacggtccacaaaagaa 923
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 catttggtggatgaatcgtgatttagaagaaaagaaaaagagatacggtccacaaaagaa 887


Query: 924 ataaatattctatttgcccgaacaatttaatttgtaaaacagaatat 970
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 ataaatattctatttgcccgaacaatttaatttgtaaaacagaatat 934

 Score = 61.9 bits (31), Expect(3) = 2e-66
 Identities = 31/31 (100%)
 Strand = Plus / Plus


Query: 1018 taataataaatatatatttattaaaacactt 1048
            |||||||||||||||||||||||||||||||
Sbjct: 981  taataataaatatatatttattaaaacactt 1011

 Score = 44.1 bits (22), Expect(3) = 2e-66
 Identities = 22/22 (100%)
 Strand = Plus / Plus


Query: 1047 ttggtgttttcatctgccatat 1068
            ||||||||||||||||||||||
Sbjct: 1011 ttggtgttttcatctgccatat 1032

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,258,598,231
Number of extensions: 81329188
Number of successful extensions: 7436829
Number of sequences better than 10.0: 188
Length of query: 1264
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1240
Effective length of database: 96,409,374,237
Effective search space: 119547624053880
Effective search space used: 119547624053880
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.20
Homology vs Protein 
Query= Contig-U16030-1 (Contig-U16030-1Q) /CSM_Contig/Contig-U16030-1Q.Seq.d
         (1264 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P24005) RecName: Full=Calcium-regulated actin-bundling protein;...   541   e-152
CP000568_548(CP000568|pid:none) Clostridium thermocellum ATCC 27...    37   2.0
AC025716_1(AC025716|pid:none) Caenorhabditis elegans cosmid Y39G...    36   2.6
AF397903_1(AF397903|pid:none) Pisum sativum AAA-metalloprotease ...    36   3.4
AC135467_32(AC135467|pid:none) Medicago truncatula clone mth2-34...    35   7.5
CP000361_1110(CP000361|pid:none) Arcobacter butzleri RM4018, com...    35   7.5
BX571662_94(BX571662|pid:none) Wolinella succinogenes, complete ...    35   7.5
AM910992_278(AM910992|pid:none) Plasmodium knowlesi strain H chr...    34   9.8

>(P24005) RecName: Full=Calcium-regulated actin-bundling protein;
           AltName: Full=34 kDa actin-binding protein;
           &A23750(A23750) &M58022_1(M58022|pid:none)
           &U32112_1(U32112|pid:none) &Z50156_1(Z50156|pid:none)
          Length = 295

 Score =  541 bits (1395), Expect = e-152
 Identities = 270/295 (91%), Positives = 270/295 (91%)
 Frame = +1

Query: 40  MAETKVAPNLTGIEQTKAGQSFTEKLSAEAMEFFCNVAKLPFSQQAVHFLNAYWAEVSKE 219
           MAETKVAPNLTGIEQTKAGQSFTEKLSAEAMEFFCNVAKLPFSQQAVHFLNAYWAEVSKE
Sbjct: 1   MAETKVAPNLTGIEQTKAGQSFTEKLSAEAMEFFCNVAKLPFSQQAVHFLNAYWAEVSKE 60

Query: 220 AEFIYSVGWETIKYADMHCKGIQLVFKYDEGNDLDFDIALYFYEQLCKFCEDPKNKNYAT 399
           AEFIYSVGWETIKYADMHCKGIQLVFKYDEGNDLDFDIALYFYEQLCKFCEDPKNKNYAT
Sbjct: 61  AEFIYSVGWETIKYADMHCKGIQLVFKYDEGNDLDFDIALYFYEQLCKFCEDPKNKNYAT 120

Query: 400 TYPISQPQMLTALKRKQELREKVDVNFDGRVSFLEYLLYQYKDFANPADFCTRSMNHDEH 579
           TYPISQPQMLTALKRKQELREKVDVNFDGRVSFLEYLLYQYKDFANPADFCTRSMNHDEH
Sbjct: 121 TYPISQPQMLTALKRKQELREKVDVNFDGRVSFLEYLLYQYKDFANPADFCTRSMNHDEH 180

Query: 580 PEIKKARLALEEVNKRIRAYEEEKARLTEESKIPGVKGLGATNMLAQIDSGPLKEQLNFA 759
           PEIKKARLALEEVNKRIRAYEEEKARLTEESKIPGVKGLGATNMLAQIDSGPLKEQLNFA
Sbjct: 181 PEIKKARLALEEVNKRIRAYEEEKARLTEESKIPGVKGLGATNMLAQIDSGPLKEQLNFA 240

Query: 760 LISAEAAVRTXXXXXXXXXXXXXXXXXXXXXXXXXIWWMNRDLEEKKKRYGPQKK 924
           LISAEAAVRT                         IWWMNRDLEEKKKRYGPQKK
Sbjct: 241 LISAEAAVRTASKKYGGAAYSGGAGDAGAGSSAGAIWWMNRDLEEKKKRYGPQKK 295

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,560,834,596
Number of extensions: 28718296
Number of successful extensions: 69922
Number of sequences better than 10.0: 8
Number of HSP's gapped: 69881
Number of HSP's successfully gapped: 8
Length of query: 421
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 290
Effective length of database: 627,191,635
Effective search space: 181885574150
Effective search space used: 181885574150
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.61  gvh: 0.21  alm: 0.48  top: 0.53  tms: 0.00  mit: 0.35  mip: 0.00
 nuc: 1.82  erl: 0.00  erm: 1.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 68.0 %: nuclear
	 20.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: plasma membrane

>> prediction for Contig-U16030-1 is nuc
VS (DIR, S) 5
VH (FL, L) 3
VF (FL, S) 7
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 7
SS (DIR, S) 0
SH (FL, L) 3
SF (FL, S) 2
CH (FL, L) 0
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 5
FC-IC (SUB) 3