Contig-U16018-1
Contig ID Contig-U16018-1
Contig update 2004. 6.11
Contig sequence
>Contig-U16018-1 (Contig-U16018-1Q) /CSM_Contig/Contig-U16018-1Q.Seq.d
AAACTTTTAAAATTTTTAATGAAGCATTTAATAATAATAATAATAATGAA
ATTAATAATGAATATTTTGAAAATGAATTTTCAAATGATGAATTAAATAG
TGCAGGTTCAATTTTAAGTTATATAATTAAAACAAATATTGGTATTGGCA
ATAATAATGATAATAGTAGTAATCCATTATTTTCATTAAATTTACCAAAA
AGAATTGATTCACATAATTCAATGTTTATTGATTATTCAACAATGCAATC
ATTAGAAATTACAAAAACATATCAAGGTGATAAGAAAGGTAGTTTATTAG
AAAGTATTGATAAAACTATAACACCACAAGGTGGTAGATTATTATTCTCA
AGAATTCAATCACCAAGTTTAGAATTGAAAGAAATCAATTCAAGATTGAA
TCAATTGGAATTCTTTTATAATAATATGGAGTTGACAAATGAAGTTAGAA
GTTTTTTAAATGCTGGTTCAGATATTGAAAGATGTATTCAACGTTTAAAA
ATTAATAAATCAGGACCAAGAGATTTACATACCATTGGCAGTACATTACA
ATCGATTTTCCA----------CAACAACTGAATTTATTGGTAATGATTT
ACAATTGAATAAAGGTATTGATGATGCAAATCTTTGGTTAATTACAGGTC
CTAATATGGGTGGAAAGAGTACATTTTTACGTCAAAATGCTTTAATCATT
TTAATGGCTCAAATGGGTTCATTCGTACCTGCTTCTTATGCTAAAATCGG
TATTGTTGATGCTATATTTAGTAGAGTGGGTTCTTCAGATGATCTTTCAA
ATGATAAATCAACATTTATGGTTGAGATGGTTGAAACAGCTTCAATTCTA
AAGAAGGCTACTAATAGATCTTTCGTAATTATGGATGAAGTAGGTCGTGG
TACAAGTACTTTGGATGGTATTTCAATTGCTCAATCTGTAGTGGAATATC
TTAATCAAGTTAACAGATGTAGAACTCTCTTTGCAACTCATTATCATGAA
CTAACTAAAAATTTAGATGAAACACCTCATATAAAATGTTATTGTTTAGC
AATTCAAGAGGATGAAGATGAAATCTTGTTCACTCATAAAATCGTACCTG
GAATGTCAAATAAATCTTATGGTATTTTTTGTGCAAAAATGGCGGGTATA
CCAAATACGGTCTTAGAAAGATCAAAATCAATTTTATTTGAATTCGAATC
TAATAATAAATTAAATTTTAATAAAAATAAAATTAAAAAAAATTAAAAAA
AAA

Gap gap included
Contig length 1243
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 6135800
End point 6134558
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 2
Link to clone list U16018
List of clone(s)

est1=FC-BO03F,1,562
est2=FC-BO03Z,563,1243
Translated Amino Acid sequence
TFKIFNEAFNNNNNNEINNEYFENEFSNDELNSAGSILSYIIKTNIGIGNNNDNSSNPLF
SLNLPKRIDSHNSMFIDYSTMQSLEITKTYQGDKKGSLLESIDKTITPQGGRLLFSRIQS
PSLELKEINSRLNQLEFFYNNMELTNEVRSFLNAGSDIERCIQRLKINKSGPRDLHTIGS
TLQSIF---

---TTEFIGNDLQLNKGIDDANLWLITGPNMGGKSTFLRQNALIILMAQMGSFVPASYAK
IGIVDAIFSRVGSSDDLSNDKSTFMVEMVETASILKKATNRSFVIMDEVGRGTSTLDGIS
IAQSVVEYLNQVNRCRTLFATHYHELTKNLDETPHIKCYCLAIQEDEDEILFTHKIVPGM
SNKSYGIFCAKMAGIPNTVLERSKSILFEFESNNKLNFNKNKIKKN*kk


Translated Amino Acid sequence (All Frames)
Frame A:
kllkflmkhliiiiimklimnilkmnfqmmn*ivqvqf*vi*lkqilvlaiimiivvihy
fh*iyqkelihiiqclliiqqcnh*klqkhikvirkvvy*kvlikl*hhkvvdyysqefn
hqv*n*kksiqd*inwnsfiiiws*qmklevf*mlvqilkdvfnv*klinqdqeiyipla
vhynrfs---

---qqlnllvmiyn*ikvlmmqifg*lqvliwvervhfyvkml*sf*wlkwvhsylllml
ksvllmlylvewvlqmifqminqhlwlrwlkqlqf*rrllidls*lwmk*vvvqvlwmvf
qllnl*wnilikltdvelslqliimn*lki*mkhli*nviv*qfkrmkmkscsliksyle
cqinlmvffvqkwrvyqirs*kdqnqfylnsnliin*ilikiklkkikkk

Frame B:
nf*nf**si*******n***if*k*ifk**ik*crfnfklyn*nkywywq*******sii
fikftkkn*ft*fnvy*lfnnaiirnyknisr**er*firky**nynttrw*iiilknsi
tkfriernqfkiesigill**ygvdk*s*kffkcwfry*kmystfkn**irtkrftyhwq
yitidfp---

---nn*iyw**ftie*ry**ckslvnyrs*ygwkeyiftskcfnhfngsngfirtcflc*
nryc*cyi**sgffr*sfk**iniyg*dg*nsfnskegy**ifrnyg*srswykyfgwyf
ncsicsgis*ss*qm*nslcnsls*tn*kfr*ntsykmllfsnsrg*r*nlvhs*nrtwn
vk*ilwyflcknggytkyglrkikinfi*iri***ikf**k*n*kklkk

Frame C:
TFKIFNEAFNNNNNNEINNEYFENEFSNDELNSAGSILSYIIKTNIGIGNNNDNSSNPLF
SLNLPKRIDSHNSMFIDYSTMQSLEITKTYQGDKKGSLLESIDKTITPQGGRLLFSRIQS
PSLELKEINSRLNQLEFFYNNMELTNEVRSFLNAGSDIERCIQRLKINKSGPRDLHTIGS
TLQSIF---

---TTEFIGNDLQLNKGIDDANLWLITGPNMGGKSTFLRQNALIILMAQMGSFVPASYAK
IGIVDAIFSRVGSSDDLSNDKSTFMVEMVETASILKKATNRSFVIMDEVGRGTSTLDGIS
IAQSVVEYLNQVNRCRTLFATHYHELTKNLDETPHIKCYCLAIQEDEDEILFTHKIVPGM
SNKSYGIFCAKMAGIPNTVLERSKSILFEFESNNKLNFNKNKIKKN*kk

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U16018-1 (Contig-U16018-1Q)
/CSM_Contig/Contig-U16018-1Q.Seq.d
(1253 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U16018-1 (Contig-U16018-1Q) /CSM_Contig/Conti... 2135 0.0
Contig-U10184-1 (Contig-U10184-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U09813-1 (Contig-U09813-1Q) /CSM_Contig/Conti... 44 5e-04
Contig-U05856-1 (Contig-U05856-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U15930-1 (Contig-U15930-1Q) /CSM_Contig/Conti... 40 0.008
Contig-U15896-1 (Contig-U15896-1Q) /CSM_Contig/Conti... 40 0.008
Contig-U15029-1 (Contig-U15029-1Q) /CSM_Contig/Conti... 40 0.008
Contig-U13933-1 (Contig-U13933-1Q) /CSM_Contig/Conti... 40 0.008
Contig-U13459-1 (Contig-U13459-1Q) /CSM_Contig/Conti... 40 0.008
Contig-U13379-1 (Contig-U13379-1Q) /CSM_Contig/Conti... 40 0.008

>Contig-U16018-1 (Contig-U16018-1Q) /CSM_Contig/Contig-U16018-1Q.Seq.d
Length = 1253

Score = 2135 bits (1077), Expect = 0.0
Identities = 1107/1107 (100%)
Strand = Plus / Plus


Query: 94 taaatagtgcaggttcaattttaagttatataattaaaacaaatattggtattggcaata 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 taaatagtgcaggttcaattttaagttatataattaaaacaaatattggtattggcaata 153


Query: 154 ataatgataatagtagtaatccattattttcattaaatttaccaaaaagaattgattcac 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 ataatgataatagtagtaatccattattttcattaaatttaccaaaaagaattgattcac 213


Query: 214 ataattcaatgtttattgattattcaacaatgcaatcattagaaattacaaaaacatatc 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ataattcaatgtttattgattattcaacaatgcaatcattagaaattacaaaaacatatc 273


Query: 274 aaggtgataagaaaggtagtttattagaaagtattgataaaactataacaccacaaggtg 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaggtgataagaaaggtagtttattagaaagtattgataaaactataacaccacaaggtg 333


Query: 334 gtagattattattctcaagaattcaatcaccaagtttagaattgaaagaaatcaattcaa 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gtagattattattctcaagaattcaatcaccaagtttagaattgaaagaaatcaattcaa 393


Query: 394 gattgaatcaattggaattcttttataataatatggagttgacaaatgaagttagaagtt 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gattgaatcaattggaattcttttataataatatggagttgacaaatgaagttagaagtt 453


Query: 454 ttttaaatgctggttcagatattgaaagatgtattcaacgtttaaaaattaataaatcag 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ttttaaatgctggttcagatattgaaagatgtattcaacgtttaaaaattaataaatcag 513


Query: 514 gaccaagagatttacataccattggcagtacattacaatcgattttccannnnnnnnnnc 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gaccaagagatttacataccattggcagtacattacaatcgattttccannnnnnnnnnc 573


Query: 574 aacaactgaatttattggtaatgatttacaattgaataaaggtattgatgatgcaaatct 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aacaactgaatttattggtaatgatttacaattgaataaaggtattgatgatgcaaatct 633


Query: 634 ttggttaattacaggtcctaatatgggtggaaagagtacatttttacgtcaaaatgcttt 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ttggttaattacaggtcctaatatgggtggaaagagtacatttttacgtcaaaatgcttt 693


Query: 694 aatcattttaatggctcaaatgggttcattcgtacctgcttcttatgctaaaatcggtat 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 aatcattttaatggctcaaatgggttcattcgtacctgcttcttatgctaaaatcggtat 753


Query: 754 tgttgatgctatatttagtagagtgggttcttcagatgatctttcaaatgataaatcaac 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 tgttgatgctatatttagtagagtgggttcttcagatgatctttcaaatgataaatcaac 813


Query: 814 atttatggttgagatggttgaaacagcttcaattctaaagaaggctactaatagatcttt 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 atttatggttgagatggttgaaacagcttcaattctaaagaaggctactaatagatcttt 873


Query: 874 cgtaattatggatgaagtaggtcgtggtacaagtactttggatggtatttcaattgctca 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 cgtaattatggatgaagtaggtcgtggtacaagtactttggatggtatttcaattgctca 933


Query: 934 atctgtagtggaatatcttaatcaagttaacagatgtagaactctctttgcaactcatta 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 atctgtagtggaatatcttaatcaagttaacagatgtagaactctctttgcaactcatta 993


Query: 994 tcatgaactaactaaaaatttagatgaaacacctcatataaaatgttattgtttagcaat 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 tcatgaactaactaaaaatttagatgaaacacctcatataaaatgttattgtttagcaat 1053


Query: 1054 tcaagaggatgaagatgaaatcttgttcactcataaaatcgtacctggaatgtcaaataa 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 tcaagaggatgaagatgaaatcttgttcactcataaaatcgtacctggaatgtcaaataa 1113


Query: 1114 atcttatggtattttttgtgcaaaaatggcgggtataccaaatacggtcttagaaagatc 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 atcttatggtattttttgtgcaaaaatggcgggtataccaaatacggtcttagaaagatc 1173


Query: 1174 aaaatcaattttatttgaattcgaatc 1200
|||||||||||||||||||||||||||
Sbjct: 1174 aaaatcaattttatttgaattcgaatc 1200


>Contig-U10184-1 (Contig-U10184-1Q) /CSM_Contig/Contig-U10184-1Q.Seq.d
Length = 772

Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus


Query: 148 gcaataataatgataatagtagtaatccattattt 182
||||||||||| |||||| || |||||||||||||
Sbjct: 22 gcaataataataataataataataatccattattt 56


>Contig-U09813-1 (Contig-U09813-1Q) /CSM_Contig/Contig-U09813-1Q.Seq.d
Length = 730

Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 150 aataataatgataatagtagtaatcc 175
||||||||| ||||||||||||||||
Sbjct: 132 aataataataataatagtagtaatcc 157


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 26,393
Number of Sequences: 8402
Number of extensions: 26393
Number of successful extensions: 3533
Number of sequences better than 10.0: 482
length of query: 1253
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1237
effective length of database: 7,941,110
effective search space: 9823153070
effective search space used: 9823153070
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 3. 8
Homology vs DNA
Query= Contig-U16018-1 (Contig-U16018-1Q) /CSM_Contig/Contig-U16018-1Q.Seq.d
(1253 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU284875) Dictyostelium discoideum gamete cDNA clone:FC-BO0... 1191 0.0 1
(AU284874) Dictyostelium discoideum gamete cDNA clone:FC-BO0... 918 0.0 1
(DU763914) HF200_20_09TR HF200_10-06-02 uncultured marine mi... 48 6e-10 3
(EJ551882) 1092959455914 Global-Ocean-Sampling_GS-29-01-01-1... 46 2e-09 3
(EJ522134) 1092955148851 Global-Ocean-Sampling_GS-29-01-01-1... 46 3e-09 3
(CP000439) Francisella tularensis subsp. novicida U112, comp... 58 1e-08 2
(CP000608) Francisella tularensis subsp. tularensis WY96-341... 58 1e-08 2
(AM233362) Francisella tularensis subsp. holarctica LVS comp... 58 1e-08 2
(BK006741) TPA_reasm: Francisella tularensis subsp. holarcti... 58 1e-08 2
(CP000437) Francisella tularensis subsp. holarctica OSU18, c... 58 1e-08 2
(CP000915) Francisella tularensis subsp. mediasiatica FSC147... 58 1e-08 2
(CP000803) Francisella tularensis subsp. holarctica FTNF002-... 58 1e-08 2
(EJ889525) 1093018434905 Global-Ocean-Sampling_GS-30-02-01-1... 42 5e-08 4
(AJ749949) Francisella tularensis subsp. tularensis SCHU S4 ... 56 5e-08 2
(AM286280) Francisella tularensis subsp. tularensis strain F... 56 5e-08 2
(DQ681628) Synthetic construct Francisella tularensis clone ... 56 7e-08 2
(EJ905170) 1093018509797 Global-Ocean-Sampling_GS-30-02-01-1... 48 3e-07 2
(EJ919252) 1093018591985 Global-Ocean-Sampling_GS-30-02-01-1... 48 3e-07 2
(EJ316781) 1095403301952 Global-Ocean-Sampling_GS-27-01-01-1... 48 3e-07 2
(EJ169737) 1092344079057 Global-Ocean-Sampling_GS-27-01-01-1... 60 5e-07 2
(ER456152) 1092963869526 Global-Ocean-Sampling_GS-35-01-01-1... 44 1e-05 3
(EJ808585) 1093017476503 Global-Ocean-Sampling_GS-30-02-01-1... 44 1e-05 3
(ER395989) 1095344023094 Global-Ocean-Sampling_GS-34-01-01-1... 48 2e-05 2
(CU062463) Onchocerca Wolbachia Sequence Fragment OW3. 60 2e-05 3
(EJ425568) 1093012270537 Global-Ocean-Sampling_GS-28-01-01-1... 46 2e-05 2
(CP000848) Rickettsia rickettsii str. 'Sheila Smith', comple... 62 5e-05 1
(CP000847) Rickettsia akari str. Hartford, complete genome. 62 5e-05 1
(CP000766) Rickettsia rickettsii str. Iowa, complete genome. 62 5e-05 1
(CP000683) Rickettsia massiliae MTU5, complete genome. 62 5e-05 1
(AE008604) Rickettsia conorii str. Malish 7, section 36 of 1... 62 5e-05 1
(EK071685) 1092960198632 Global-Ocean-Sampling_GS-31-01-01-1... 38 8e-05 3
(EJ637368) 1093006100544 Global-Ocean-Sampling_GS-29-01-01-1... 46 2e-04 3
(EK397070) 1095469525294 Global-Ocean-Sampling_GS-31-01-01-1... 46 3e-04 3
(EJ560708) 1092959549625 Global-Ocean-Sampling_GS-29-01-01-1... 46 3e-04 3
(EJ356420) 1092963644082 Global-Ocean-Sampling_GS-28-01-01-1... 32 6e-04 5
(AE017197) Rickettsia typhi str. Wilmington complete genome. 40 6e-04 15
(EJ769136) 1092963365053 Global-Ocean-Sampling_GS-30-02-01-1... 44 8e-04 3
(AJ235271) Rickettsia prowazekii strain Madrid E, complete g... 46 0.001 12
(EJ591379) 1092961051416 Global-Ocean-Sampling_GS-29-01-01-1... 48 0.001 2
(EK161311) 1095458032677 Global-Ocean-Sampling_GS-31-01-01-1... 36 0.002 3
(EK158198) 1095458013828 Global-Ocean-Sampling_GS-31-01-01-1... 34 0.003 4
(EJ680849) 1092955127257 Global-Ocean-Sampling_GS-30-02-01-1... 56 0.003 1
(EJ844730) 1093017850287 Global-Ocean-Sampling_GS-30-02-01-1... 34 0.003 4
(EJ949244) 1093018932931 Global-Ocean-Sampling_GS-30-02-01-1... 34 0.004 4
(CP000409) Rickettsia canadensis str. McKiel, complete genome. 52 0.007 15
(AY159038) Dictyostelium discoideum LvsB (lvsB) gene, comple... 40 0.007 5
(AE015927) Clostridium tetani E88, complete genome. 36 0.008 2
(EJ773560) 1092978700718 Global-Ocean-Sampling_GS-30-02-01-1... 36 0.012 3
(BD061520) Genome DNA of symbiotic bacteria of aphid. 54 0.013 1
(AR409405) Sequence 1 from patent US 6632935. 54 0.013 1
(AL929351) Plasmodium falciparum strain 3D7, chromosome 5, s... 54 0.013 1
(CP000053) Rickettsia felis URRWXCal2, complete genome. 54 0.013 1
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum... 54 0.013 1
(EJ911226) 1093018539388 Global-Ocean-Sampling_GS-30-02-01-1... 46 0.016 2
(EJ441219) 1093015305099 Global-Ocean-Sampling_GS-28-01-01-1... 46 0.016 2
(EJ419435) 1093012220889 Global-Ocean-Sampling_GS-28-01-01-1... 42 0.016 2
(EJ752464) 1092963046397 Global-Ocean-Sampling_GS-30-02-01-1... 36 0.017 3
(EJ765836) 1092963219014 Global-Ocean-Sampling_GS-30-02-01-1... 44 0.017 2
(EJ910567) 1093018536508 Global-Ocean-Sampling_GS-30-02-01-1... 46 0.018 2
(EJ188758) 1092344173400 Global-Ocean-Sampling_GS-27-01-01-1... 46 0.019 2
(EJ620470) 1092963055529 Global-Ocean-Sampling_GS-29-01-01-1... 46 0.019 2
(EJ200521) 1092344296956 Global-Ocean-Sampling_GS-27-01-01-1... 46 0.020 2
(CP000724) Alkaliphilus metalliredigens QYMF, complete genome. 38 0.028 2
(CP000937) Francisella philomiragia subsp. philomiragia ATCC... 38 0.029 2
(ER498540) 1093015372416 Global-Ocean-Sampling_GS-35-01-01-1... 36 0.050 3
(EJ049663) 1095454140116 Global-Ocean-Sampling_GS-26-01-01-1... 52 0.051 1
(EJ037574) 1095454079341 Global-Ocean-Sampling_GS-26-01-01-1... 52 0.051 1
(EJ031254) 1095454047819 Global-Ocean-Sampling_GS-26-01-01-1... 52 0.051 1
(EU221239) Uncultured marine bacterium EB000_55B11, complete... 52 0.051 1
(CP000673) Clostridium kluyveri DSM 555, complete genome. 52 0.051 1
(AE017196) Wolbachia endosymbiont of Drosophila melanogaster... 52 0.051 1
(EK414626) 1095506145689 Global-Ocean-Sampling_GS-31-01-01-1... 36 0.059 3
(DU759009) ASNG2247.g2 HF200_10-06-02 uncultured marine micr... 36 0.059 3
(EJ513988) 1092343586518 Global-Ocean-Sampling_GS-29-01-01-1... 34 0.063 3
(CF447004) EST683349 normalized cDNA library of onion Allium... 38 0.063 2
(EK397108) 1095469525625 Global-Ocean-Sampling_GS-31-01-01-1... 42 0.064 2
(EJ092056) 1095460202088 Global-Ocean-Sampling_GS-26-01-01-1... 46 0.075 2
(EK191192) 1095460019614 Global-Ocean-Sampling_GS-31-01-01-1... 42 0.077 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 34 0.16 18
(AL929355) Plasmodium falciparum strain 3D7, chromosome 9; s... 34 0.18 16
(BH763724) BMBAC338H04T7_PSU Brugia malayi Genomic Bac Libra... 48 0.18 2
(EJ629365) 1092963294885 Global-Ocean-Sampling_GS-29-01-01-1... 38 0.19 3
(EJ582779) 1092960189332 Global-Ocean-Sampling_GS-29-01-01-1... 40 0.19 2
(EJ321423) 1095403375356 Global-Ocean-Sampling_GS-27-01-01-1... 50 0.20 1
(ED309104) AUAC-aae82h07.b1 Ascaris suum whole genome shotgu... 50 0.20 1
(ED205984) AUAC-aaq82h12.g1 Ascaris suum whole genome shotgu... 50 0.20 1
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 50 0.20 1
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 50 0.20 1
(CP000312) Clostridium perfringens SM101, complete genome. 50 0.20 1
(CP000246) Clostridium perfringens ATCC 13124, complete genome. 50 0.20 1
(BA000016) Clostridium perfringens str. 13 DNA, complete gen... 50 0.20 1
(EJ616028) 1092963017429 Global-Ocean-Sampling_GS-29-01-01-1... 40 0.23 2
(ER581418) 1093015841132 Global-Ocean-Sampling_GS-36-01-01-2... 46 0.23 2
(ER585665) 1093015871006 Global-Ocean-Sampling_GS-36-01-01-2... 42 0.24 2
(EJ427697) 1093015235701 Global-Ocean-Sampling_GS-28-01-01-1... 46 0.25 2
(EJ717292) 1092959428719 Global-Ocean-Sampling_GS-30-02-01-1... 42 0.25 2
(EK290126) 1095462327706 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.25 2
(EK401957) 1095469543304 Global-Ocean-Sampling_GS-31-01-01-1... 46 0.27 2
(EJ724746) 1092959489977 Global-Ocean-Sampling_GS-30-02-01-1... 42 0.28 2
(EK283048) 1095462302122 Global-Ocean-Sampling_GS-31-01-01-1... 46 0.28 2
(AC105032) Homo sapiens chromosome 18, clone CTD-2272L2, com... 38 0.35 7
(AF525506) Fusobacterium nucleatum DNA mismatch repair prote... 38 0.45 3
(AL844507) Plasmodium falciparum chromosome 8. 36 0.57 14
(EK106490) 1092963054447 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.65 3
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 40 0.79 12
(CU464123) Zebrafish DNA sequence from clone DKEY-110I1 in l... 48 0.80 1
(CR925828) Zebrafish DNA sequence from clone DKEY-156K7 in l... 48 0.80 1
(CR847928) Zebrafish DNA sequence from clone DKEYP-67E7 in l... 48 0.80 1
(BX649501) Zebrafish DNA sequence from clone DKEY-123F20 in ... 48 0.80 1
(AC124326) Mus musculus chromosome 16, clone RP24-463I7, com... 48 0.80 1
(AC116781) Mus musculus chromosome 16, clone RP24-134G20, co... 48 0.80 1
(AM778096) Carica papaya Y chromosome sequence, clone PH 89M06. 48 0.80 1
(AM451379) Vitis vinifera contig VV78X243223.16, whole genom... 48 0.80 1
(AC146558) Medicago truncatula clone mth2-12a23, complete se... 48 0.80 1
(CR382400) Plasmodium falciparum chromosome 6, complete sequ... 48 0.80 1
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 48 0.80 1
(AC162007) Bos taurus clone CH240-108B3, WORKING DRAFT SEQUE... 48 0.80 1
(AC147453) Carollia perspicillata clone 357G5, WORKING DRAFT... 48 0.80 1
(AC141339) Rattus norvegicus clone CH230-29F20, WORKING DRAF... 48 0.80 1
(AC097552) Rattus norvegicus clone CH230-184D9, WORKING DRAF... 48 0.80 1
(CT009666) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 48 0.80 1
(CR388142) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.80 1
(AC222669) Bos taurus clone CH240-442L6, WORKING DRAFT SEQUE... 48 0.80 1
(AC184464) Strongylocentrotus purpuratus clone R3-4003I7, WO... 48 0.80 1
(AC184290) Strongylocentrotus purpuratus clone R3-61K5, WORK... 48 0.80 1
(AC181744) Strongylocentrotus purpuratus clone R3-1037H02, W... 48 0.80 1
(AC175904) Strongylocentrotus purpuratus clone R3-3043G20, W... 48 0.80 1
(AC168593) Strongylocentrotus purpuratus clone R3-3065C23, W... 48 0.80 1
(AC168369) Strongylocentrotus purpuratus clone R3-4013L7, WO... 48 0.80 1
(AZ177814) SP_0148_B1_F05_SP6E Strongylocentrotus purpuratus... 48 0.80 1
(ER415182) 1095390160520 Global-Ocean-Sampling_GS-34-01-01-1... 48 0.80 1
(ER367984) 1093022128290 Global-Ocean-Sampling_GS-34-01-01-1... 48 0.80 1
(EJ549749) 1092959431771 Global-Ocean-Sampling_GS-29-01-01-1... 48 0.80 1
(EJ152035) 1092343771355 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.80 1
(DU761350) ASNG3649.g2 HF200_10-06-02 uncultured marine micr... 48 0.80 1
(EH014571) USDA-FP_187258 Lysiphlebus testaceipes adult whol... 48 0.80 1
(CV673779) RET7SJ_22C08.T7 Schistosoma japonicum reverse cDN... 48 0.80 1
(BJ864646) Marchantia polymorpha cDNA clone:lwb30n01, 5' end. 48 0.80 1
(EY501845) CBBP6039.fwd CBBP Hirudo medicinalis hermaphrodit... 48 0.80 1
(AE017321) Wolbachia endosymbiont strain TRS of Brugia malay... 48 0.80 1
(AE001437) Clostridium acetobutylicum ATCC 824, complete gen... 48 0.80 1
(EJ336234) 1092963480820 Global-Ocean-Sampling_GS-28-01-01-1... 38 0.85 2
(DR926566) EST1118105 Aquilegia cDNA library Aquilegia formo... 46 0.93 2
(DR949540) EST1141079 Aquilegia cDNA library Aquilegia formo... 46 0.98 2
(ER503656) 1093015412111 Global-Ocean-Sampling_GS-35-01-01-1... 40 1.1 2
(EK167209) 1095458058688 Global-Ocean-Sampling_GS-31-01-01-1... 40 1.3 2
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 40 1.4 8
(BY949900) Physcomitrella patens subsp. patens cDNA clone: P... 32 1.5 3
(BX842696) Zebrafish DNA sequence from clone DKEY-165P1 in l... 36 1.6 7
(AC179030) Strongylocentrotus purpuratus clone R3-32P12, WOR... 32 1.6 2
(AC176645) Strongylocentrotus purpuratus clone R3-113A12, WO... 32 1.6 2
(AC179491) Strongylocentrotus purpuratus clone R3-64C09, WOR... 32 1.6 2
(AC178570) Strongylocentrotus purpuratus clone R3-3027A17, W... 32 1.7 2
(DC934438) Physcomitrella patens subsp. patens cDNA, clone:p... 32 1.7 3
(D00872) Entamoeba histolytica gene for 30,000-Mr antigen, p... 36 1.7 2
(AM433632) Vitis vinifera, whole genome shotgun sequence, co... 38 1.7 2
(BY949890) Physcomitrella patens subsp. patens cDNA clone: P... 32 1.7 3
(CP000087) Rickettsia bellii RML369-C, complete genome. 46 1.9 14
(AL929263) Zebrafish DNA sequence from clone CH211-242M24 in... 42 1.9 5
(EK166169) 1095458052468 Global-Ocean-Sampling_GS-31-01-01-1... 36 2.2 3
(AM449705) Vitis vinifera, whole genome shotgun sequence, co... 42 2.2 4
(EK230291) 1095460176772 Global-Ocean-Sampling_GS-31-01-01-1... 34 2.4 2
(CT027617) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 2.4 5
(CP000576) Prochlorococcus marinus str. MIT 9301, complete g... 44 2.4 17
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g... 38 2.4 18
(AC176590) Strongylocentrotus purpuratus clone R3-3077L03, W... 40 2.4 4
(EY315835) CAWX26276.rev CAWX Helobdella robusta Primary Ear... 38 2.5 2
(EJ690747) 1092956002643 Global-Ocean-Sampling_GS-30-02-01-1... 34 2.5 3
(EJ692659) 1092956008408 Global-Ocean-Sampling_GS-30-02-01-1... 34 2.6 3
(BZ522945) BOKBC82TF BO_10_15_KB_nuc Brassica oleracea genom... 40 2.6 2
(EK057466) 1092960039846 Global-Ocean-Sampling_GS-31-01-01-1... 32 2.9 4
(CX503607) JGI_XZG40890.fwd NIH_XGC_tropGas7 Xenopus (Silura... 42 3.0 2
(EY359926) CAWZ6765.rev CAWZ Helobdella robusta Primary Late... 38 3.0 2
(EY349887) CAWZ17298.rev CAWZ Helobdella robusta Primary Lat... 38 3.0 2
(EY350803) CAWZ17786.rev CAWZ Helobdella robusta Primary Lat... 38 3.1 2
(AB026184) Entamoeba dispar mRNA for peroxiredoxin, complete... 36 3.1 2
(CT025749) Zebrafish DNA sequence from clone DKEY-249P9 in l... 46 3.2 1
(AY741371) Emiliania huxleyi strain CCMP 373 chloroplast, co... 46 3.2 1
(AM466793) Vitis vinifera contig VV78X034495.8, whole genome... 46 3.2 1
(AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5... 46 3.2 1
(AC188121) Trichinella spiralis chromosome UNK clone TS195-4... 46 3.2 1
(AL583856) Human DNA sequence from clone RP11-134K13 on chro... 46 3.2 1
(AC103425) Rattus norvegicus clone CH230-149K20, *** SEQUENC... 46 3.2 1
(AC073199) Homo sapiens chromosome 6 clone RP11-252E4, WORKI... 46 3.2 1
(AC216154) Equus caballus clone CH241-249J14, WORKING DRAFT ... 46 3.2 1
(AC184524) Strongylocentrotus purpuratus clone R3-4019K3, WO... 46 3.2 1
(AC181031) Strongylocentrotus purpuratus clone R3-3050P16, W... 46 3.2 1
(AC180029) Strongylocentrotus purpuratus clone R3-23N1, WORK... 46 3.2 1
(AC178901) Strongylocentrotus purpuratus clone R3-3114K6, WO... 46 3.2 1
(AC178800) Strongylocentrotus purpuratus clone R3-29L22, WOR... 46 3.2 1
(AC178460) Strongylocentrotus purpuratus clone R3-3039N16, W... 46 3.2 1
(AC178459) Strongylocentrotus purpuratus clone R3-3039M24, W... 46 3.2 1
(AC176477) Strongylocentrotus purpuratus clone R3-3070K2, WO... 46 3.2 1
(AC174740) Strongylocentrotus purpuratus clone R3-1024I4, WO... 46 3.2 1
(ER515555) 1093015500220 Global-Ocean-Sampling_GS-35-01-01-1... 46 3.2 1
(EK034770) 1092959422061 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.2 1
(DX396587) GE__Sa0055B07.b1 Gossypium exiguum WGS library Go... 46 3.2 1
(BX150764) Danio rerio genomic clone DKEY-112G2, genomic sur... 46 3.2 1
(BJ433207) Dictyostelium discoideum cDNA clone:ddv21h05, 3' ... 46 3.2 1
(FK869798) EST_crog_evp_915792 crog_evp Caligus rogercressey... 46 3.2 1
(FE186085) LV_NC_RA39K12f Litopenaeus vannamei nerve cord cD... 46 3.2 1
(FE186084) LV_NC_RA39I12r Litopenaeus vannamei nerve cord cD... 46 3.2 1
(FD749648) Afi04_50_G12_C014.b1 Aristolochia fimbriata flowe... 46 3.2 1
(AP009510) Uncultured Termite group 1 bacterium phylotype Rs... 46 3.2 1
(CP000896) Acholeplasma laidlawii PG-8A, complete genome. 46 3.2 1
(CP000849) Rickettsia bellii OSU 85-389, complete genome. 46 3.2 1
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 46 3.2 1
(CP000716) Thermosipho melanesiensis BI429, complete genome. 46 3.2 1
(BX548174) Prochlorococcus marinus MED4 complete genome. 46 3.2 1
(AM406671) Lactococcus lactis subsp. cremoris MG1363, comple... 46 3.2 1
(EK478777) 1095469500717 Global-Ocean-Sampling_GS-32-01-01-1... 38 3.2 2
(CX463659) JGI_XZG46011.rev NIH_XGC_tropGas7 Xenopus (Silura... 42 3.5 2
(EJ784939) 1093017305946 Global-Ocean-Sampling_GS-30-02-01-1... 38 3.5 2
(EK446751) 1095467046980 Global-Ocean-Sampling_GS-32-01-01-1... 38 3.5 2
(EJ766902) 1092963295404 Global-Ocean-Sampling_GS-30-02-01-1... 36 3.6 2
(EJ458578) 1093018378072 Global-Ocean-Sampling_GS-28-01-01-1... 44 3.6 2
(AM641691) Entamoeba dispar GSS, clone dispar8a02.p1k. 36 3.7 2
(AM629450) Entamoeba dispar GSS, clone dispar37c06.p1k. 36 3.7 2
(AM629285) Entamoeba dispar GSS, clone dispar35a02.p1k. 36 3.9 2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 32 4.3 15
(AY198133) Spiroplasma kunkelii strain CR2-3x partial genome... 34 4.6 6
(FK200938) XABT211500.b1 Gateway compatible cien cDNA librar... 38 4.7 3
(DQ342053) Dictyostelium discoideum STIP mRNA, complete cds. 40 5.0 3
(AF332582) Kluyveromyces lactis mismatch repair protein Msh2... 38 5.1 3
(EK068463) 1092960157329 Global-Ocean-Sampling_GS-31-01-01-1... 38 5.5 3
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 36 5.5 7
(CP000726) Clostridium botulinum A str. ATCC 19397, complete... 38 5.6 18
(AC181459) Strongylocentrotus purpuratus clone R3-51D13, WOR... 34 5.7 5
(CU468496) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 5.8 2
(DN954458) it73d10.g1 Gnetum female cone (NYBG) Gnetum gnemo... 36 5.9 2
(CU928012) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 32 6.1 2
(CU914775) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 32 6.1 2
(BX901938) Zebrafish DNA sequence from clone CH211-254D18 in... 38 6.7 4
(AM664613) Entamoeba moshkovskii FIC GSS, clone mosh101b07.q1k. 34 7.8 3
(DV260525) AEDCE31TF Aedes re-sequencing Aedes aegypti cDNA ... 34 7.9 2
(EI808261) MUGQ_CH252P513O15T7_GL519_050 CHORI-252 Vervet Mo... 34 7.9 2
(CT022816) KBrH133P24 genomic clone, KBrH (HindIII) BAC libr... 34 7.9 2
(DV260310) AEDCD21TF Aedes re-sequencing Aedes aegypti cDNA ... 34 8.0 2
(EG978131) GLL051_E08_028 Cyamopsis tetragonoloba (L.) Taub ... 34 8.1 2
(AC222989) Bos taurus clone CH240-433B13, WORKING DRAFT SEQU... 44 8.1 6
(AC098320) Rattus norvegicus clone CH230-1N24, *** SEQUENCIN... 40 8.8 7
(BJ413780) Dictyostelium discoideum cDNA clone:ddv16n24, 5' ... 40 8.9 2
(AE014843) Plasmodium falciparum 3D7 chromosome 11 section 8... 34 9.0 8
(AC154109) Ornithorhynchus anatinus chromosome UNK clone OAB... 32 9.2 6
(AE014846) Plasmodium falciparum 3D7 chromosome 12, section ... 38 9.3 7
(CD920434) G608.117B06F010912 G608 Triticum aestivum cDNA cl... 34 9.6 2
(AC176570) Strongylocentrotus purpuratus clone R3-3077A08, W... 38 9.9 6

>(AU284875) Dictyostelium discoideum gamete cDNA clone:FC-BO03, 3' end
single read.
Length = 681

Score = 1191 bits (601), Expect = 0.0
Identities = 601/601 (100%)
Strand = Plus / Plus


Query: 573 caacaactgaatttattggtaatgatttacaattgaataaaggtattgatgatgcaaatc 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caacaactgaatttattggtaatgatttacaattgaataaaggtattgatgatgcaaatc 60


Query: 633 tttggttaattacaggtcctaatatgggtggaaagagtacatttttacgtcaaaatgctt 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttggttaattacaggtcctaatatgggtggaaagagtacatttttacgtcaaaatgctt 120


Query: 693 taatcattttaatggctcaaatgggttcattcgtacctgcttcttatgctaaaatcggta 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taatcattttaatggctcaaatgggttcattcgtacctgcttcttatgctaaaatcggta 180


Query: 753 ttgttgatgctatatttagtagagtgggttcttcagatgatctttcaaatgataaatcaa 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgttgatgctatatttagtagagtgggttcttcagatgatctttcaaatgataaatcaa 240


Query: 813 catttatggttgagatggttgaaacagcttcaattctaaagaaggctactaatagatctt 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catttatggttgagatggttgaaacagcttcaattctaaagaaggctactaatagatctt 300


Query: 873 tcgtaattatggatgaagtaggtcgtggtacaagtactttggatggtatttcaattgctc 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcgtaattatggatgaagtaggtcgtggtacaagtactttggatggtatttcaattgctc 360


Query: 933 aatctgtagtggaatatcttaatcaagttaacagatgtagaactctctttgcaactcatt 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatctgtagtggaatatcttaatcaagttaacagatgtagaactctctttgcaactcatt 420


Query: 993 atcatgaactaactaaaaatttagatgaaacacctcatataaaatgttattgtttagcaa 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcatgaactaactaaaaatttagatgaaacacctcatataaaatgttattgtttagcaa 480


Query: 1053 ttcaagaggatgaagatgaaatcttgttcactcataaaatcgtacctggaatgtcaaata 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttcaagaggatgaagatgaaatcttgttcactcataaaatcgtacctggaatgtcaaata 540


Query: 1113 aatcttatggtattttttgtgcaaaaatggcgggtataccaaatacggtcttagaaagat 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatcttatggtattttttgtgcaaaaatggcgggtataccaaatacggtcttagaaagat 600


Query: 1173 c 1173
|
Sbjct: 601 c 601

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,400,770,054
Number of extensions: 83055136
Number of successful extensions: 7222689
Number of sequences better than 10.0: 247
Length of query: 1253
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1229
Effective length of database: 96,409,374,237
Effective search space: 118487120937273
Effective search space used: 118487120937273
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.20
Homology vs Protein
Query= Contig-U16018-1 (Contig-U16018-1Q) /CSM_Contig/Contig-U16018-1Q.Seq.d
(1253 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(A6WV86) RecName: Full=DNA mismatch repair protein mutS; &CP000... 239 2e-61
(Q2RNG0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 237 6e-61
(A6U5G0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 236 1e-60
CP000301_359(CP000301|pid:none) Rhodopseudomonas palustris BisB1... 236 1e-60
(Q21CE8) RecName: Full=DNA mismatch repair protein mutS; 236 1e-60
(Q5HBQ7) RecName: Full=DNA mismatch repair protein mutS; &CR767... 236 1e-60
(A8I275) RecName: Full=DNA mismatch repair protein mutS; &AP009... 236 2e-60
AM999887_388(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 236 2e-60
(Q5FHE8) RecName: Full=DNA mismatch repair protein mutS; &CR925... 235 2e-60
CP000924_1155(CP000924|pid:none) Thermoanaerobacter pseudethanol... 235 3e-60
(P61673) RecName: Full=DNA mismatch repair protein mutS; 234 4e-60
AE017196_167(AE017196|pid:none) Wolbachia endosymbiont of Drosop... 234 4e-60
(Q2KD76) RecName: Full=DNA mismatch repair protein mutS; &CP000... 234 5e-60
AE017321_254(AE017321|pid:none) Wolbachia endosymbiont strain TR... 234 5e-60
CP001096_510(CP001096|pid:none) Rhodopseudomonas palustris TIE-1... 234 6e-60
CP001074_420(CP001074|pid:none) Rhizobium etli CIAT 652, complet... 234 6e-60
(Q1QQJ4) RecName: Full=DNA mismatch repair protein mutS; &CP000... 233 8e-60
(Q13ED0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 233 1e-59
(P56883) RecName: Full=DNA mismatch repair protein mutS; &AL591... 233 1e-59
AF227730_1(AF227730|pid:none) Sinorhizobium meliloti mismatch re... 233 1e-59
(Q8YES6) RecName: Full=DNA mismatch repair protein mutS; 233 1e-59
CP000628_483(CP000628|pid:none) Agrobacterium radiobacter K84 ch... 233 1e-59
CP001488_135(CP001488|pid:none) Brucella melitensis ATCC 23457 c... 233 1e-59
AC3477(AC3477) DNA mismatch repair protein mutS [imported] - Bru... 233 1e-59
(Q8RA71) RecName: Full=DNA mismatch repair protein mutS; &AE008... 232 2e-59
(Q07V29) RecName: Full=DNA mismatch repair protein mutS; &CP000... 232 2e-59
(Q1MMA5) RecName: Full=DNA mismatch repair protein mutS; &AM236... 232 2e-59
AP008981_431(AP008981|pid:none) Orientia tsutsugamushi str. Iked... 232 2e-59
(Q89VX1) RecName: Full=DNA mismatch repair protein mutS; &BA000... 232 2e-59
CP001275_1061(CP001275|pid:none) Thermomicrobium roseum DSM 5159... 231 4e-59
CP000613_2835(CP000613|pid:none) Rhodospirillum centenum SW, com... 231 4e-59
CP001562_90(CP001562|pid:none) Bartonella grahamii as4aup, compl... 231 5e-59
(A8F164) RecName: Full=DNA mismatch repair protein mutS; &CP000... 231 5e-59
(A8EZG1) RecName: Full=DNA mismatch repair protein mutS; &CP000... 230 7e-59
CP000633_325(CP000633|pid:none) Agrobacterium vitis S4 chromosom... 230 7e-59
(Q4UM86) RecName: Full=DNA mismatch repair protein mutS; &CP000... 230 7e-59
CU062463_8(CU062463|pid:none) Onchocerca Wolbachia Sequence Frag... 230 9e-59
(A8GRI6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 230 9e-59
(A8GMX2) RecName: Full=DNA mismatch repair protein mutS; &CP000... 229 1e-58
CP001612_324(CP001612|pid:none) Rickettsia africae ESF-5, comple... 229 1e-58
(Q92IL9) RecName: Full=DNA mismatch repair protein mutS; &A9775... 229 2e-58
CP001227_536(CP001227|pid:none) Rickettsia peacockii str. Rustic... 229 2e-58
CU459003_3291(CU459003|pid:none) Magnetospirillum gryphiswaldens... 229 2e-58
CP001196_121(CP001196|pid:none) Oligotropha carboxidovorans OM5 ... 229 2e-58
(A9ILT1) RecName: Full=DNA mismatch repair protein mutS; &AM260... 229 2e-58
(A5CDU2) RecName: Full=DNA mismatch repair protein mutS; &AM494... 229 2e-58
(Q5NL79) RecName: Full=DNA mismatch repair protein mutS; &AE008... 229 2e-58
(A7HZ64) RecName: Full=DNA mismatch repair protein mutS; &CP000... 228 3e-58
(A5N8I5) RecName: Full=DNA mismatch repair protein mutS; &AP009... 228 3e-58
CP001001_605(CP001001|pid:none) Methylobacterium radiotolerans J... 228 3e-58
(A4WVX8) RecName: Full=DNA mismatch repair protein mutS; &CP000... 228 5e-58
(Q68X73) RecName: Full=DNA mismatch repair protein mutS; &AE017... 228 5e-58
(A8GX86) RecName: Full=DNA mismatch repair protein mutS; &CP000... 227 6e-58
CP001348_1660(CP001348|pid:none) Clostridium cellulolyticum H10,... 227 8e-58
(A5FQC0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 226 2e-57
CP000908_4222(CP000908|pid:none) Methylobacterium extorquens PA1... 226 2e-57
CP001098_1154(CP001098|pid:none) Halothermothrix orenii H 168, c... 226 2e-57
CP001029_4699(CP001029|pid:none) Methylobacterium populi BJ001, ... 226 2e-57
CP001078_1605(CP001078|pid:none) Clostridium botulinum E3 str. A... 225 2e-57
CP000030_279(CP000030|pid:none) Anaplasma marginale str. St. Mar... 225 3e-57
(A5VA00) RecName: Full=DNA mismatch repair protein mutS; &CP000... 225 3e-57
CP001150_2616(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 225 3e-57
(Q3IYI5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 225 3e-57
(A1UU95) RecName: Full=DNA mismatch repair protein mutS; &CP000... 225 3e-57
CP001079_272(CP001079|pid:none) Anaplasma marginale str. Florida... 225 3e-57
(Q3Z767) RecName: Full=DNA mismatch repair protein mutS; &CP000... 225 3e-57
CP001510_4333(CP001510|pid:none) Methylobacterium extorquens AM1... 224 4e-57
CP000237_321(CP000237|pid:none) Neorickettsia sennetsu strain Mi... 224 4e-57
(A9KL10) RecName: Full=DNA mismatch repair protein mutS; &CP000... 224 4e-57
(A3PNR5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 224 4e-57
(Q16D05) RecName: Full=DNA mismatch repair protein mutS; &CP000... 224 5e-57
CP000356_2770(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 224 5e-57
(Q12VC9) RecName: Full=DNA mismatch repair protein mutS; &CP000... 224 7e-57
(Q2GJL7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 224 7e-57
(Q0AYB5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 224 7e-57
CP001056_1751(CP001056|pid:none) Clostridium botulinum B str. Ek... 224 7e-57
(Q1GCK9) RecName: Full=DNA mismatch repair protein mutS; &CP000... 223 1e-56
CP000248_3279(CP000248|pid:none) Novosphingobium aromaticivorans... 223 1e-56
(A7GE45) RecName: Full=DNA mismatch repair protein mutS; &CP000... 222 2e-56
CP001581_1819(CP001581|pid:none) Clostridium botulinum A2 str. K... 222 2e-56
(B1IM68) RecName: Full=DNA mismatch repair protein mutS; &CP000... 222 2e-56
(B1KSA3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 222 2e-56
(Q6MBV4) RecName: Full=DNA mismatch repair protein mutS; &BX908... 222 2e-56
(Q2RJG2) RecName: Full=DNA mismatch repair protein mutS; &CP000... 221 4e-56
(A9WFZ9) RecName: Full=DNA mismatch repair protein mutS; &CP000... 221 4e-56
(A6TR79) RecName: Full=DNA mismatch repair protein mutS; &CP000... 221 4e-56
CP000853_1527(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 221 4e-56
CP000930_2497(CP000930|pid:none) Heliobacterium modesticaldum Ic... 221 6e-56
(A7NPT5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 221 6e-56
(A5UZK7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 221 6e-56
Z98559_18(Z98559|pid:none) S.pombe chromosome I cosmid c23C11. 220 9e-56
(A9GIM9) RecName: Full=DNA mismatch repair protein mutS; &AM746... 220 9e-56
(O13921) RecName: Full=MutS protein homolog 1; &CU329670_896(CU... 220 9e-56
(Q8TTB4) RecName: Full=DNA mismatch repair protein mutS; &AE010... 219 1e-55
(Q01X96) RecName: Full=DNA mismatch repair protein mutS; &CP000... 219 1e-55
CP000943_6202(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 219 2e-55
(Q2N5V9) RecName: Full=DNA mismatch repair protein mutS; &CP000... 219 2e-55
CP000975_109(CP000975|pid:none) Methylacidiphilum infernorum V4,... 219 2e-55
(Q46CE2) RecName: Full=DNA mismatch repair protein mutS; &CP000... 218 3e-55
(Q1IN52) RecName: Full=DNA mismatch repair protein mutS; &CP000... 218 4e-55
(Q8PWA7) RecName: Full=DNA mismatch repair protein mutS; &AE008... 218 5e-55
CP001390_2732(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 218 5e-55
CP001336_2691(CP001336|pid:none) Desulfitobacterium hafniense DC... 217 6e-55
CP001107_1683(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 217 6e-55
CP001357_1111(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 217 8e-55
CP001280_2272(CP001280|pid:none) Methylocella silvestris BL2, co... 217 8e-55
CP001131_2141(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 216 1e-54
(Q67NK1) RecName: Full=DNA mismatch repair protein mutS; &AP006... 216 1e-54
CP001071_338(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 216 1e-54
CP001016_1245(CP001016|pid:none) Beijerinckia indica subsp. indi... 216 2e-54
CP000875_4058(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 215 2e-54
(B8FJL5) RecName: Full=DNA mismatch repair protein mutS; &CP001... 215 2e-54
(A0Q0M6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 215 3e-54
(A1AMW9) RecName: Full=DNA mismatch repair protein mutS; &CP000... 215 3e-54
CP000770_68(CP000770|pid:none) Candidatus Sulcia muelleri GWSS, ... 214 4e-54
CP001230_748(CP001230|pid:none) Persephonella marina EX-H1, comp... 214 4e-54
CP001393_1432(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 214 4e-54
(A3PFD3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 214 4e-54
CP001614_2474(CP001614|pid:none) Teredinibacter turnerae T7901, ... 213 1e-53
(A7HC64) RecName: Full=DNA mismatch repair protein mutS; &CP000... 213 1e-53
(Q5LWH0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 213 2e-53
(A4XL47) RecName: Full=DNA mismatch repair protein mutS; &CP000... 213 2e-53
(Q2S254) RecName: Full=DNA mismatch repair protein mutS; &CP000... 212 2e-53
(A2BTM6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 212 3e-53
(Q2LUL3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 212 3e-53
(A5FJ63) RecName: Full=DNA mismatch repair protein mutS; 211 4e-53
(Q30ZX3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 211 4e-53
AP008971_743(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 211 6e-53
(A0B976) RecName: Full=DNA mismatch repair protein mutS; &CP000... 210 8e-53
AP009153_3911(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 210 8e-53
AJ783432_1(AJ783432|pid:none) Pseudomonas stutzeri mutS gene for... 210 8e-53
(A6GWN3) RecName: Full=DNA mismatch repair protein mutS; &AM398... 210 1e-52
AM181176_1138(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 209 1e-52
(Q6AQ04) RecName: Full=DNA mismatch repair protein mutS; &CR522... 209 2e-52
AM946015_1742(AM946015|pid:none) Streptococcus uberis 0140J comp... 209 2e-52
(Q1MRT4) RecName: Full=DNA mismatch repair protein mutS; &AM180... 209 2e-52
(P61666) RecName: Full=DNA mismatch repair protein mutS; &AE017... 209 2e-52
(A1VDD9) RecName: Full=DNA mismatch repair protein mutS; &CP000... 209 2e-52
CP000386_287(CP000386|pid:none) Rubrobacter xylanophilus DSM 994... 207 5e-52
AJ783431_1(AJ783431|pid:none) Pseudomonas stutzeri mutS gene for... 207 5e-52
(Q255T1) RecName: Full=DNA mismatch repair protein mutS; &AP006... 207 6e-52
(P61671) RecName: Full=DNA mismatch repair protein mutS; &AE017... 207 6e-52
(Q56239) RecName: Full=DNA mismatch repair protein mutS; &AP008... 207 6e-52
(B1JB25) RecName: Full=DNA mismatch repair protein mutS; &CP000... 207 6e-52
S62790(S62790)mismatch DNA recognition protein mutS [validated] ... 207 6e-52
(Q48F92) RecName: Full=DNA mismatch repair protein mutS; &CP000... 207 8e-52
CP000697_903(CP000697|pid:none) Acidiphilium cryptum JF-5, compl... 207 8e-52
(Q3KKQ0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 206 1e-51
(Q9Z6W5) RecName: Full=DNA mismatch repair protein mutS; &AE002... 206 1e-51
AM884176_161(AM884176|pid:none) Chlamydia trachomatis strain L2/... 206 1e-51
(A6W1Q6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 206 1e-51
AP009484_890(AP009484|pid:none) Macrococcus caseolyticus JCSC540... 206 1e-51
FM872307_807(FM872307|pid:none) Chlamydia trachomatis B/TZ1A828/... 206 1e-51
(Q3KH79) RecName: Full=DNA mismatch repair protein mutS; &CP000... 206 1e-51
(A7HMG4) RecName: Full=DNA mismatch repair protein mutS; &CP000... 206 1e-51
AM270376_36(AM270376|pid:none) Aspergillus niger contig An16c024... 206 1e-51
(Q4KHE3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 206 1e-51
(B0KSD2) RecName: Full=DNA mismatch repair protein mutS; 206 1e-51
(Q02VS3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 206 1e-51
(A5W816) RecName: Full=DNA mismatch repair protein mutS; &CP000... 206 1e-51
(Q88ME7) RecName: Full=DNA mismatch repair protein mutS; &AE015... 206 1e-51
(Q3A4F1) RecName: Full=DNA mismatch repair protein mutS; &CP000... 206 2e-51
CU466930_904(CU466930|pid:none) Candidatus Cloacamonas acidamino... 206 2e-51
(Q3M892) RecName: Full=DNA mismatch repair protein mutS; &CP000... 205 2e-51
(A2RP10) RecName: Full=DNA mismatch repair protein mutS; &AM406... 205 2e-51
(P27345) RecName: Full=DNA mismatch repair protein mutS; &A5329... 205 2e-51
AM982525_1(AM982525|pid:none) Pseudomonas avellanae partial mutS... 205 2e-51
(A0L7L5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 205 2e-51
CP001229_6(CP001229|pid:none) Sulfurihydrogenibium azorense Az-F... 205 2e-51
(A4VJN9) RecName: Full=DNA mismatch repair protein mutS; 205 2e-51
CP001102_713(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 205 3e-51
AB039965_2(AB039965|pid:none) Pseudomonas putida icd, mutS, fdxA... 205 3e-51
(Q8KCC0) RecName: Full=DNA mismatch repair protein mutS; &AE006... 204 4e-51
AF245440_4(AF245440|pid:none) Pseudomonas fluorescens lipoprotei... 204 4e-51
(A3CR17) RecName: Full=DNA mismatch repair protein mutS; &CP000... 204 4e-51
(Q7NLT8) RecName: Full=DNA mismatch repair protein mutS; &BA000... 204 4e-51
(Q9PLD0) RecName: Full=DNA mismatch repair protein mutS; &AE002... 204 5e-51
CP000934_2294(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 204 7e-51
AM889285_2079(AM889285|pid:none) Gluconacetobacter diazotrophicu... 204 7e-51
CP001100_93(CP001100|pid:none) Chloroherpeton thalassium ATCC 35... 203 9e-51
CP001101_799(CP001101|pid:none) Chlorobium phaeobacteroides BS1,... 203 9e-51
(Q1I659) RecName: Full=DNA mismatch repair protein mutS; &CT573... 203 9e-51
(A6LLR1) RecName: Full=DNA mismatch repair protein mutS; &CP000... 203 9e-51
(Q5QUB6) RecName: Full=DNA mismatch repair protein mutS; 203 1e-50
EU682972_1(EU682972|pid:none) Francisella philomiragia subsp. no... 202 2e-50
EU723250_1(EU723250|pid:none) Francisella philomiragia subsp. no... 202 2e-50
(Q8RFK2) RecName: Full=DNA mismatch repair protein mutS; &AE009... 202 2e-50
AP010656_384(AP010656|pid:none) Candidatus Azobacteroides pseudo... 202 2e-50
CP000254_3127(CP000254|pid:none) Methanospirillum hungatei JF-1,... 202 2e-50
(A6V1G8) RecName: Full=DNA mismatch repair protein mutS; &CP000... 202 2e-50
(A4W4J7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 202 3e-50
(A6LG92) RecName: Full=DNA mismatch repair protein mutS; &CP000... 202 3e-50
(Q21LB1) RecName: Full=DNA mismatch repair protein mutS; &CP000... 201 3e-50
EU682968_1(EU682968|pid:none) Francisella philomiragia subsp. ph... 201 3e-50
(Q7NRW7) RecName: Full=DNA mismatch repair protein mutS; &AE016... 201 5e-50
(Q4FV41) RecName: Full=DNA mismatch repair protein mutS; &CP000... 201 5e-50
EU682965_1(EU682965|pid:none) Francisella philomiragia subsp. ph... 201 5e-50
EU682967_1(EU682967|pid:none) Francisella philomiragia subsp. ph... 201 5e-50
(Q9HY08) RecName: Full=DNA mismatch repair protein mutS; &AE004... 201 5e-50
EU682969_1(EU682969|pid:none) Francisella philomiragia subsp. ph... 201 5e-50
(Q5WFY3) RecName: Full=DNA mismatch repair protein mutS; &AP006... 201 5e-50
(A4SFT1) RecName: Full=DNA mismatch repair protein mutS; &CP000... 201 5e-50
(Q3IDC8) RecName: Full=DNA mismatch repair protein mutS; &CR954... 201 6e-50
(A2C5T5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 201 6e-50
(Q0BV38) RecName: Full=DNA mismatch repair protein mutS; &CP000... 201 6e-50
AY150295_1(AY150295|pid:none) Enterococcus faecium strain E0013 ... 200 8e-50
(Q11YS6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 200 8e-50
(Q8A334) RecName: Full=DNA mismatch repair protein mutS; &AE015... 200 8e-50
(Q15QR9) RecName: Full=DNA mismatch repair protein mutS; &CP000... 200 1e-49
(A8AZU4) RecName: Full=DNA mismatch repair protein mutS; &CP000... 200 1e-49
AM778956_116(AM778956|pid:none) Microcystis aeruginosa PCC 7806 ... 200 1e-49
(Q56215) RecName: Full=DNA mismatch repair protein mutS; &U3311... 199 1e-49
AF091119_1(AF091119|pid:none) Lactococcus lactis DNA mismatch re... 199 1e-49
(B1YMD7) RecName: Full=DNA mismatch repair protein mutS; &CP001... 199 1e-49
(Q9CDK9) RecName: Full=DNA mismatch repair protein mutS; &AE005... 199 1e-49
CP001615_102(CP001615|pid:none) Exiguobacterium sp. AT1b, comple... 199 2e-49
(Q7UZL6) RecName: Full=DNA mismatch repair protein mutS; &BX548... 199 2e-49
(Q7V9M5) RecName: Full=DNA mismatch repair protein mutS; &AE017... 199 2e-49
AY150298_1(AY150298|pid:none) Enterococcus faecium strain C1 Mut... 199 2e-49
CP001097_1643(CP001097|pid:none) Chlorobium limicola DSM 245, co... 199 2e-49
AM920435_942(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 199 2e-49
CR382138_901(CR382138|pid:none) Debaryomyces hansenii strain CBS... 198 3e-49
(Q5UZG9) RecName: Full=DNA mismatch repair protein mutS 1; 198 3e-49
(Q3AQZ8) RecName: Full=DNA mismatch repair protein mutS; &CP000... 198 3e-49
AY596297_2248(AY596297|pid:none) Haloarcula marismortui ATCC 430... 198 3e-49
CP000806_2150(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 198 3e-49
(A9KG24) RecName: Full=DNA mismatch repair protein mutS; 198 3e-49
(A3QC86) RecName: Full=DNA mismatch repair protein mutS; &CP000... 198 4e-49
(O83348) RecName: Full=DNA mismatch repair protein mutS; &AE000... 198 4e-49
CU928179_258(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 198 4e-49
CP001108_1551(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 198 4e-49
BA000022_1243(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 197 5e-49
DQ489736_1297(DQ489736|pid:none) Leuconostoc citreum KM20, compl... 197 5e-49
(Q8CXG6) RecName: Full=DNA mismatch repair protein mutS; &BA000... 197 7e-49
(Q045Q5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 197 7e-49
(Q64MG7) RecName: Full=DNA mismatch repair protein mutS; &AP006... 197 7e-49
CP000921_1883(CP000921|pid:none) Streptococcus pneumoniae Taiwan... 197 7e-49
CP001344_3540(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 197 7e-49
(Q6LMU0) RecName: Full=DNA mismatch repair protein mutS; &CR378... 197 7e-49
(Q5L7B7) RecName: Full=DNA mismatch repair protein mutS; &CR626... 197 7e-49
AE007317_1885(AE007317|pid:none) Streptococcus pneumoniae R6, co... 197 9e-49
CP001408_2699(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 197 9e-49
(A0Q809) RecName: Full=DNA mismatch repair protein mutS; &CP000... 197 9e-49
(Q7MHR2) RecName: Full=DNA mismatch repair protein mutS; 197 9e-49
(B0TK13) RecName: Full=DNA mismatch repair protein mutS; &CP000... 197 9e-49
(P0A3R3) RecName: Full=DNA mismatch repair protein hexA; &(P0A3... 197 9e-49
(A1BHN5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 197 9e-49
CP001503_2300(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 197 9e-49
BA000037_2807(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 197 9e-49
(Q12PY3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 197 9e-49
(A1S4E6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 197 9e-49
(Q5E7G7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 196 1e-48
M84169_1(M84169|pid:none) S.cerevisiae homologue of bacterial Mu... 196 1e-48
AF220055_1(AF220055|pid:none) Pseudomonas aeruginosa mismatch re... 196 1e-48
(A1V5I2) RecName: Full=DNA mismatch repair protein mutS; &(A2SA... 196 1e-48
(A8H1T4) RecName: Full=DNA mismatch repair protein mutS; &CP000... 196 1e-48
CP000526_2129(CP000526|pid:none) Burkholderia mallei SAVP1 chrom... 196 1e-48
(Q63SR9) RecName: Full=DNA mismatch repair protein mutS; &BX571... 196 1e-48
(Q0BNM7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 196 1e-48
CP000572_2580(CP000572|pid:none) Burkholderia pseudomallei 1106a... 196 1e-48
CP000951_174(CP000951|pid:none) Synechococcus sp. PCC 7002, comp... 196 1e-48
(A3NWZ4) RecName: Full=DNA mismatch repair protein mutS; 196 1e-48
(Q5M1Z0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 196 1e-48
(Q03MY4) RecName: Full=DNA mismatch repair protein mutS; &CP000... 196 1e-48
CU633901_159(CU633901|pid:none) Podospora anserina genomic DNA c... 196 1e-48
FM954972_2463(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 196 2e-48
(Q47WN0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 196 2e-48
AM980469_1(AM980469|pid:none) Staphylococcus aureus subsp. aureu... 196 2e-48
(Q82ZA2) RecName: Full=DNA mismatch repair protein mutS; &AE016... 196 2e-48
CP000780_1210(CP000780|pid:none) Candidatus Methanoregula boonei... 196 2e-48
EU682970_1(EU682970|pid:none) Francisella noatunensis subsp. ori... 195 2e-48
(Q83CQ2) RecName: Full=DNA mismatch repair protein mutS; 195 2e-48
(A9NCN3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 195 2e-48
CP001339_1263(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ... 195 2e-48
(B0CF30) RecName: Full=DNA mismatch repair protein mutS; &CP000... 195 2e-48
CP001154_372(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 195 3e-48
(Q5FLX5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 195 3e-48
(Q0VNJ1) RecName: Full=DNA mismatch repair protein mutS; &AM286... 195 3e-48
(Q38YR4) RecName: Full=DNA mismatch repair protein mutS; &CR936... 194 4e-48
CP001277_1460(CP001277|pid:none) Candidatus Hamiltonella defensa... 194 4e-48
CP001485_53(CP001485|pid:none) Vibrio cholerae MJ-1236 chromosom... 194 4e-48
CP001015_1945(CP001015|pid:none) Streptococcus pneumoniae G54, c... 194 4e-48
(Q89AD3) RecName: Full=DNA mismatch repair protein mutS; &AE016... 194 6e-48
AM980462_1(AM980462|pid:none) Staphylococcus aureus subsp. aureu... 194 6e-48
(A1RHG2) RecName: Full=DNA mismatch repair protein mutS; &(A4Y9... 194 6e-48
(Q0A8K3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 194 7e-48
CP001252_1214(CP001252|pid:none) Shewanella baltica OS223, compl... 194 7e-48
(Q5N0X9) RecName: Full=DNA mismatch repair protein mutS; &AP008... 194 7e-48
(A6WR19) RecName: Full=DNA mismatch repair protein mutS; &CP000... 194 7e-48
(A3D786) RecName: Full=DNA mismatch repair protein mutS; &CP000... 194 7e-48
(Q2FYZ9) RecName: Full=DNA mismatch repair protein mutS; &AF378... 194 7e-48
(Q8EBR9) RecName: Full=DNA mismatch repair protein mutS; &AE014... 194 7e-48
CP000090_1107(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 194 7e-48
(Q1LTQ0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 194 7e-48
(Q3ANH5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 194 7e-48
(B0UWV7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 193 9e-48
(Q47DJ8) RecName: Full=DNA mismatch repair protein mutS; &CP000... 193 9e-48
(Q1WT15) RecName: Full=DNA mismatch repair protein mutS; &CP000... 193 9e-48
EU652253_1(EU652253|pid:none) Vibrio parahaemolyticus strain ATC... 193 9e-48
(Q60BA1) RecName: Full=DNA mismatch repair protein mutS; &AE017... 193 1e-47
EU652258_1(EU652258|pid:none) Vibrio parahaemolyticus strain J-C... 193 1e-47
CU633749_1161(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 193 1e-47
(Q8DWW1) RecName: Full=DNA mismatch repair protein mutS; &(Q8E2... 193 1e-47
(Q87LQ9) RecName: Full=DNA mismatch repair protein mutS; &BA000... 193 1e-47
CP000817_1607(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 193 1e-47
EU652259_1(EU652259|pid:none) Vibrio parahaemolyticus strain J-C... 193 1e-47
FN392320_942(FN392320|pid:none) Pichia pastoris GS115 chromosome... 193 1e-47
(Q0KCC0) RecName: Full=DNA mismatch repair protein mutS; &AM260... 193 1e-47
(Q3JYM3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 193 1e-47
(A0KU91) RecName: Full=DNA mismatch repair protein mutS; &CP000... 193 1e-47
(A4G717) RecName: Full=DNA mismatch repair protein mutS; &CU207... 192 2e-47
(Q88UZ7) RecName: Full=DNA mismatch repair protein mutS; &AL935... 192 2e-47
CP001392_1064(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 192 2e-47
CP001161_392(CP001161|pid:none) Buchnera aphidicola str. 5A (Acy... 192 2e-47
CP001158_390(CP001158|pid:none) Buchnera aphidicola str. Tuc7 (A... 192 2e-47
(P57504) RecName: Full=DNA mismatch repair protein mutS; &BA000... 192 2e-47
CP000270_2800(CP000270|pid:none) Burkholderia xenovorans LB400 c... 192 2e-47
(Q13X51) RecName: Full=DNA mismatch repair protein mutS; 192 2e-47
(Q03EQ7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 192 2e-47
(P74926) RecName: Full=DNA mismatch repair protein mutS; &AE000... 192 2e-47
DQ423216_1(DQ423216|pid:none) Haemophilus influenzae strain 11P6... 192 2e-47
(A1JJU1) RecName: Full=DNA mismatch repair protein mutS; &AM286... 192 2e-47
(Q7MXR7) RecName: Full=DNA mismatch repair protein mutS; &AE015... 192 2e-47
(Q2NVL9) RecName: Full=DNA mismatch repair protein mutS; &AP008... 192 2e-47
(Q0HL63) RecName: Full=DNA mismatch repair protein mutS; &CP000... 192 2e-47
(Q4QML2) RecName: Full=DNA mismatch repair protein mutS; &CP000... 192 2e-47
AP009380_2041(AP009380|pid:none) Porphyromonas gingivalis ATCC 3... 192 2e-47
(Q086A1) RecName: Full=DNA mismatch repair protein mutS; &CP000... 192 3e-47
(A5GHU5) RecName: Full=DNA mismatch repair protein mutS; &CT971... 192 3e-47
(A8FST7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 192 3e-47
(A5UE20) RecName: Full=DNA mismatch repair protein mutS; &CP000... 192 3e-47
(Q5NYP9) RecName: Full=DNA mismatch repair protein mutS; &CR555... 192 3e-47
(Q82U08) RecName: Full=DNA mismatch repair protein mutS; &AL954... 192 3e-47
(P44834) RecName: Full=DNA mismatch repair protein mutS; &G6408... 191 4e-47
(A7GR99) RecName: Full=DNA mismatch repair protein mutS; &CP000... 191 4e-47
(Q8K9D2) RecName: Full=DNA mismatch repair protein mutS; &AE013... 191 4e-47
(Q6D8C1) RecName: Full=DNA mismatch repair protein mutS; &BX950... 191 4e-47
(A7FLX1) RecName: Full=DNA mismatch repair protein mutS; &(Q66E... 191 5e-47
(B5XV49) RecName: Full=DNA mismatch repair protein mutS; &CP000... 191 5e-47
(A6TD24) RecName: Full=DNA mismatch repair protein mutS; &AP006... 191 5e-47
(A4TQ04) RecName: Full=DNA mismatch repair protein mutS; &(Q1CL... 191 6e-47
(Q0IE05) RecName: Full=DNA mismatch repair protein mutS; &CP000... 191 6e-47
(A1TNU7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 191 6e-47
(B0BRS8) RecName: Full=DNA mismatch repair protein mutS; &CP000... 191 6e-47
CP001091_1664(CP001091|pid:none) Actinobacillus pleuropneumoniae... 191 6e-47
AF440200_1(AF440200|pid:none) Escherichia coli strain B MutS (mu... 190 8e-47
CP000970_2767(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 190 8e-47
(Q0TEC9) RecName: Full=DNA mismatch repair protein mutS; &CP000... 190 8e-47
CP000967_3186(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P... 190 8e-47
(Q8FEL3) RecName: Full=DNA mismatch repair protein mutS; &AE014... 190 8e-47
(A7ZQH3) RecName: Full=DNA mismatch repair protein mutS; 190 8e-47
(Q9JX94) RecName: Full=DNA mismatch repair protein mutS; &A8100... 190 8e-47
(Q3BVY0) RecName: Full=DNA mismatch repair protein mutS; &AM039... 190 8e-47
U69873_1(U69873|pid:none) Escherichia coli DNA mismatch repair p... 190 8e-47
CU928162_3109(CU928162|pid:none) Escherichia coli ED1a chromosom... 190 8e-47
(A4SIL2) RecName: Full=DNA mismatch repair protein mutS; &CP000... 190 8e-47
(A4JFW7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 190 8e-47
(B7LWH8) RecName: Full=DNA mismatch repair protein mutS; &(B7N6... 190 8e-47
(A8A3L2) RecName: Full=DNA mismatch repair protein mutS; &(B1IU... 190 8e-47
(B5Z397) RecName: Full=DNA mismatch repair protein mutS; &(B7LX... 190 8e-47
(B6I6B9) RecName: Full=DNA mismatch repair protein mutS; &AP009... 190 8e-47
(Q5H2C5) RecName: Full=DNA mismatch repair protein mutS; &AE013... 190 8e-47
(A8FDH3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 190 8e-47
AM933172_2737(AM933172|pid:none) Salmonella enterica subsp. ente... 190 1e-46
(Q1JEH0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 190 1e-46
CU694395_37(CU694395|pid:none) Ralstonia solanacearum strain Mol... 190 1e-46
(Q1J489) RecName: Full=DNA mismatch repair protein mutS; &CP000... 190 1e-46
CP001127_2849(CP001127|pid:none) Salmonella enterica subsp. ente... 190 1e-46
CP000976_767(CP000976|pid:none) Borrelia duttonii Ly, complete g... 190 1e-46
AY268717_1(AY268717|pid:none) Salmonella enterica strain SARB71 ... 190 1e-46
AY268715_1(AY268715|pid:none) Salmonella enterica strain SARB57 ... 190 1e-46
CU914168_1704(CU914168|pid:none) Ralstonia solanacearum strain I... 190 1e-46
CP000993_755(CP000993|pid:none) Borrelia recurrentis A1, complet... 190 1e-46
(Q1J9C1) RecName: Full=DNA mismatch repair protein mutS; &(Q1JJ... 190 1e-46
FJ539011_1(FJ539011|pid:none) Salmonella enterica subsp. enteric... 190 1e-46
(A5ILG0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 190 1e-46
AP009385_2024(AP009385|pid:none) Burkholderia multivorans ATCC 1... 190 1e-46
CP000969_1099(CP000969|pid:none) Thermotoga sp. RQ2, complete ge... 190 1e-46
CP001068_974(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 190 1e-46
AY268716_1(AY268716|pid:none) Salmonella enterica strain SARB17 ... 190 1e-46
FM200053_2709(FM200053|pid:none) Salmonella enterica subsp. ente... 190 1e-46
CP000857_2849(CP000857|pid:none) Salmonella enterica subsp. ente... 190 1e-46
(Q8K5J5) RecName: Full=DNA mismatch repair protein mutS; &AE014... 190 1e-46
(Q5PEE6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 190 1e-46
(A9N1F8) RecName: Full=DNA mismatch repair protein mutS; &(P0A1... 190 1e-46
AY568593_1(AY568593|pid:none) Haemophilus influenzae isolate C24... 190 1e-46
CP001144_2921(CP001144|pid:none) Salmonella enterica subsp. ente... 190 1e-46
AY268734_1(AY268734|pid:none) Salmonella enterica strain SARB12 ... 190 1e-46
(Q48QT6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 190 1e-46
CU928166_215(CU928166|pid:none) Kluyveromyces thermotolerans str... 190 1e-46
CP001113_2922(CP001113|pid:none) Salmonella enterica subsp. ente... 190 1e-46
AF383974_1(AF383974|pid:none) Salmonella enterica strain S2980 m... 189 1e-46
(Q8PMX2) RecName: Full=DNA mismatch repair protein mutS; &AE008... 189 1e-46
(Q2SBR5) RecName: Full=DNA mismatch repair protein mutS; 189 1e-46
(A9MF43) RecName: Full=DNA mismatch repair protein mutS; &CP000... 189 1e-46
CP000155_4989(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 189 1e-46
AE005174_3608(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 189 1e-46
(A5GQ22) RecName: Full=DNA mismatch repair protein mutS; &CT978... 189 1e-46
(Q8Y093) RecName: Full=DNA mismatch repair protein mutS; &AL646... 189 1e-46
(Q99XL8) RecName: Full=DNA mismatch repair protein mutS; &AE004... 189 1e-46
(Q32CJ6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 189 1e-46
AY268735_1(AY268735|pid:none) Salmonella enterica strain SARB55 ... 189 1e-46
CP001600_3128(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 189 2e-46
(Q46IE5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 189 2e-46
(Q5L0E5) RecName: Full=DNA mismatch repair protein mutS; &BA000... 189 2e-46
CU468135_2694(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 189 2e-46
AY268750_1(AY268750|pid:none) Salmonella enterica strain SARB61 ... 189 2e-46
(A2SJQ7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 189 2e-46
AY568596_1(AY568596|pid:none) Haemophilus influenzae isolate R46... 189 2e-46
CP001321_1328(CP001321|pid:none) Haemophilus parasuis SH0165, co... 189 2e-46
DQ465631_1(DQ465631|pid:none) Neisseria meningitidis strain Z126... 188 3e-46
(A1KWM6) RecName: Full=DNA mismatch repair protein mutS; &AM421... 188 3e-46
(Q9JWT7) RecName: Full=DNA mismatch repair protein mutS; &AL157... 188 3e-46
AY268700_1(AY268700|pid:none) Salmonella enterica strain SARB32 ... 188 3e-46
CP001638_1119(CP001638|pid:none) Geobacillus sp. WCH70, complete... 188 3e-46
CP001111_1166(CP001111|pid:none) Stenotrophomonas maltophilia R5... 188 3e-46
(B7GW85) RecName: Full=DNA mismatch repair protein mutS; &(B7IB... 188 3e-46
CP000521_1342(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 188 3e-46
CR380958_559(CR380958|pid:none) Candida glabrata strain CBS138 c... 188 4e-46
CP000786_813(CP000786|pid:none) Leptospira biflexa serovar Patoc... 188 4e-46
(Q5WVP6) RecName: Full=DNA mismatch repair protein mutS; &CR628... 188 4e-46
CP000675_1894(CP000675|pid:none) Legionella pneumophila str. Cor... 188 4e-46
(A0K8L2) RecName: Full=DNA mismatch repair protein mutS; &CP000... 188 4e-46
CP000777_788(CP000777|pid:none) Leptospira biflexa serovar Patoc... 188 4e-46
AL009126_1761(AL009126|pid:none) Bacillus subtilis subsp. subtil... 188 4e-46
(Q0BDU3) RecName: Full=DNA mismatch repair protein mutS; &CP000... 188 4e-46
(Q39EX8) RecName: Full=DNA mismatch repair protein mutS; &CP000... 188 4e-46
CP000958_2087(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ... 188 4e-46
CP001025_1976(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 188 4e-46
(Q1BHQ1) RecName: Full=DNA mismatch repair protein mutS; &CP000... 188 4e-46
(Q49X88) RecName: Full=DNA mismatch repair protein mutS; &AP008... 187 5e-46
(Q5F5J4) RecName: Full=DNA mismatch repair protein mutS; &AE004... 187 5e-46
(Q3SJP0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 187 5e-46
(Q1QZX5) RecName: Full=DNA mismatch repair protein mutS; &CP000... 187 5e-46
(Q03VV4) RecName: Full=DNA mismatch repair protein mutS; &CP000... 187 5e-46
(Q7VKA1) RecName: Full=DNA mismatch repair protein mutS; &AE017... 187 5e-46
(A1K764) RecName: Full=DNA mismatch repair protein mutS; 187 7e-46
(Q9PCR2) RecName: Full=DNA mismatch repair protein mutS; 187 7e-46
FM204883_2064(FM204883|pid:none) Streptococcus equi subsp. equi ... 187 9e-46
(Q0SM54) RecName: Full=DNA mismatch repair protein mutS; &CP000... 187 9e-46
(Q5X4B2) RecName: Full=DNA mismatch repair protein mutS; &CR628... 187 9e-46
CP000713_1997(CP000713|pid:none) Psychrobacter sp. PRwf-1, compl... 187 9e-46
(B7HLA3) RecName: Full=DNA mismatch repair protein mutS; &CP001... 187 9e-46
FM204884_1891(FM204884|pid:none) Streptococcus equi subsp. zooep... 187 9e-46
(A0RHE1) RecName: Full=DNA mismatch repair protein mutS; &CP000... 187 9e-46
(Q81WR3) RecName: Full=DNA mismatch repair protein mutS; &AE016... 187 9e-46
(Q6HF46) RecName: Full=DNA mismatch repair protein mutS; &AE017... 187 9e-46
(P61669) RecName: Full=DNA mismatch repair protein mutS; &AE016... 187 9e-46
CP001129_1820(CP001129|pid:none) Streptococcus equi subsp. zooep... 186 1e-45
CP000941_1125(CP000941|pid:none) Xylella fastidiosa M12, complet... 186 1e-45
AF383975_1(AF383975|pid:none) Salmonella enterica strain S2983 m... 186 1e-45
(B7J0P3) RecName: Full=DNA mismatch repair protein mutS; &(O517... 186 2e-45
(Q636Q7) RecName: Full=DNA mismatch repair protein mutS; &CP000... 186 2e-45
CP000878_1772(CP000878|pid:none) Prochlorococcus marinus str. MI... 186 2e-45
(A1VLZ6) RecName: Full=DNA mismatch repair protein mutS; &CP000... 186 2e-45
(Q87CI8) RecName: Full=DNA mismatch repair protein mutS; &AE009... 186 2e-45
CP001011_1116(CP001011|pid:none) Xylella fastidiosa M23, complet... 186 2e-45
(Q04RT2) RecName: Full=DNA mismatch repair protein mutS; &(Q051... 185 3e-45
(B7HDP4) RecName: Full=DNA mismatch repair protein mutS; &CP001... 185 3e-45
(P43248) RecName: Full=DNA mismatch repair protein spellchecker ... 185 3e-45
CP001050_2322(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945... 185 3e-45
CP001281_2220(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 185 3e-45
CP001013_1174(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 185 3e-45
AY596297_2586(AY596297|pid:none) Haloarcula marismortui ATCC 430... 185 3e-45
(Q65QA9) RecName: Full=DNA mismatch repair protein mutS; &AE016... 185 3e-45
(B7ITM1) RecName: Full=DNA mismatch repair protein mutS; &CP001... 184 4e-45
CP000922_1502(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 184 4e-45
CR382128_386(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 184 4e-45
CU928174_258(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 184 4e-45
(A9VS13) RecName: Full=DNA mismatch repair protein mutS; &CP000... 184 6e-45
(A6VL76) RecName: Full=DNA mismatch repair protein mutS; &CP000... 184 8e-45
CP000359_1524(CP000359|pid:none) Deinococcus geothermalis DSM 11... 183 1e-44
AF400583_1(AF400583|pid:none) Acinetobacter sp. 93A2 mismatch re... 183 1e-44
(B2KB17) RecName: Full=DNA mismatch repair protein mutS; &CP001... 182 2e-44
(A4IMI0) RecName: Full=DNA mismatch repair protein mutS; &CP000... 182 2e-44
(Q6FC54) RecName: Full=DNA mismatch repair protein mutS; &CR543... 182 2e-44
CR380955_328(CR380955|pid:none) Candida glabrata strain CBS138 c... 182 2e-44
AF400582_3(AF400582|pid:none) Acinetobacter sp. ADP1 mismatch re... 182 2e-44
(Q92BV3) RecName: Full=DNA mismatch repair protein mutS; &AG161... 182 2e-44
CP001635_3543(CP001635|pid:none) Variovorax paradoxus S110 chrom... 182 3e-44
(A0AIK5) RecName: Full=DNA mismatch repair protein mutS; &AM263... 181 4e-44
(Q55GU9) RecName: Full=DNA mismatch repair protein Msh6; 181 4e-44
CP001175_1147(CP001175|pid:none) Listeria monocytogenes HCC23, c... 181 4e-44
AY187681_3(AY187681|pid:none) Vibrio vulnificus lipoprotein D (n... 181 5e-44
(Q8Y789) RecName: Full=DNA mismatch repair protein mutS; &AC125... 181 6e-44
FM242711_1386(FM242711|pid:none) Listeria monocytogenes Clip8145... 180 8e-44
(Q2KWZ4) RecName: Full=DNA mismatch repair protein mutS; &AM167... 179 2e-43
(Q7W880) RecName: Full=DNA mismatch repair protein mutS; 178 3e-43
BX640429_310(BX640429|pid:none) Bordetella parapertussis strain ... 178 3e-43
BX640442_21(BX640442|pid:none) Bordetella bronchiseptica strain ... 178 3e-43
(Q7VY01) RecName: Full=DNA mismatch repair protein mutS; &BX640... 178 3e-43
AP003047_2(AP003047|pid:none) Oryza sativa Japonica Group genomi... 177 9e-43
AF227632_1(AF227632|pid:none) Zea mays mismatch binding protein ... 177 9e-43
(Q2UT70) RecName: Full=DNA mismatch repair protein msh3; AltName... 176 1e-42
(O66652) RecName: Full=DNA mismatch repair protein mutS; &AE000... 176 1e-42
AM902716_3482(AM902716|pid:none) Bordetella petrii strain DSM 12... 176 1e-42
CR382126_116(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 176 2e-42
(A6R7S1) RecName: Full=DNA mismatch repair protein MSH3; AltName... 176 2e-42
CR382134_678(CR382134|pid:none) Debaryomyces hansenii strain CBS... 175 3e-42
CP001365_2197(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 174 5e-42

>(A6WV86) RecName: Full=DNA mismatch repair protein mutS;
&CP000758_158(CP000758|pid:none)
Length = 910

Score = 239 bits (609), Expect = 2e-61
Identities = 112/208 (53%), Positives = 159/208 (76%), Gaps = 2/208 (0%)
Frame = +2

Query: 584 FIGNDLQLNKGIDDAN--LWLITGPNMGGKSTFLRQNALIILMAQMGSFVPASYAKIGIV 757
F+ ND L+ D N +WL+TGPNMGGKSTFLRQNALI +MAQMGSFVPA AKIG+V
Sbjct: 635 FVANDCDLSPQADGGNGAIWLLTGPNMGGKSTFLRQNALIAIMAQMGSFVPAGSAKIGVV 694

Query: 758 DAIFSRVGSSDDLSNDKSTFMVEMVETASILKKATNRSFVIMDEVGRGTSTLDGISIAQS 937
D +FSRVG+SDDL+ +STFMVEMVETA+IL +A RS VI+DE+GRGT+T DG+SIA +
Sbjct: 695 DRLFSRVGASDDLARGRSTFMVEMVETAAILNQAGERSLVILDEIGRGTATFDGLSIAWA 754

Query: 938 VVEYLNQVNRCRTLFATHYHELTKNLDETPHIKCYCLAIQEDEDEILFTHKIVPGMSNKS 1117
VEYL++ NRCR LFATH+HE+T ++ + + ++E +++++F H++ G +++S
Sbjct: 755 AVEYLHEKNRCRALFATHFHEMTALSEKLERLSNVTMRVKEWDNDVVFLHEVAKGAADRS 814

Query: 1118 YGIFCAKMAGIPNTVLERSKSILFEFES 1201
YG+ A++AG+P V+ R++ +L + E+
Sbjct: 815 YGVQVARLAGLPEAVVNRARDVLHQLEA 842

Score = 82.8 bits (203), Expect = 2e-14
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Frame = +3

Query: 219 SMFIDYSTMQSLEITKTYQGDKKGSLLESIDKTITPQGGRLLFSRIQSPSLELKEINSRL 398
++FID +T SLE+ +T G++ GSLL+++D+T+T G RLL R+ +P KEI RL
Sbjct: 290 TLFIDPATRASLELARTMSGNRDGSLLKAVDRTVTGGGARLLAERLTAPLTNPKEIALRL 349

Query: 399 NQLEFFYNNMELTNEVRSFLNAGSDIERCIQRLKINKSGPRDL----------HTIGSTL 548
+ + +F + L +R+ L D+ R + RL + + GPRDL H I S L
Sbjct: 350 DSVSWFLSEQSLCEAMRAELKGVPDMPRGLSRLAVGRGGPRDLGSLARGFEAAHVIASLL 409

Query: 549 QS 554
+S
Sbjct: 410 ES 411

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,644,663,574
Number of extensions: 30337088
Number of successful extensions: 87659
Number of sequences better than 10.0: 1210
Number of HSP's gapped: 86824
Number of HSP's successfully gapped: 1778
Length of query: 417
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 286
Effective length of database: 627,191,635
Effective search space: 179376807610
Effective search space used: 179376807610
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.51 gvh: 0.23 alm: 0.38 top: 0.53 tms: 0.00 mit: 0.25 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.60 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

60.0 %: nuclear
24.0 %: cytoplasmic
12.0 %: mitochondrial
4.0 %: peroxisomal

>> prediction for Contig-U16018-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 0