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Dicty_cDB
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U16017-1
Contig ID Contig-U16017-1
Contig update 2004. 6.11
Contig sequence 
>Contig-U16017-1 (Contig-U16017-1Q) /CSM_Contig/Contig-U16017-1Q.Seq.d
AATGGATATAAAAATAAATAATTGTTCACCAGTTAAATATTTTGATGGTA
ATTCAATGAGGTGTATTTGGTGGCCAATTGGATACTCGTTAGGTGATGAA
AAATCAAATTCATGTGTAAAATGTAATAGGGAAATTGTAACTTGGCAATA
TGGGCAATGGTGGTCATGAAAATGATTATTATATGGTTGATAATAGTCCT
TTAAAAGTTTATTCATGTGCTAATGATATGTGTAATGGGAATAACACATG
TATTGGTGATAATAATATTGGTGATTTATGTTACTATTGTACAAATTATC
ATGAAAGTACTTCAATACAAGCTTCAAAGAATGGTATTCAATGTTGTTCA
AATTTCAATTTTTAACTTGAATGAAAATTTTTCTTTTCATATAGAATTAG
TATTTTACCATTATTTAGAATTTCCATTGATTTCTTTGATGGTTATTGTT
ATTTTAGGGGTTTAAATTATTTACATAAAGTTTTAATATCAAATTTAATT
ATACTCTTTTTATTTATTATTAGTTATTCAGATTTAACAATATGGTTGTT
AAATAAATTTTTAAA----------CATTATCAATGATATTCAATCCAAT
TGATGTCATGCCAATTATAATTGCAATTCAATTGATTTATACAATGATTT
TCATTTTTATTAGTCCTATAAAAAATGAATTATCAACTTCATCTTTTAAA
AAATTAAATATAATAACCTCAACAATCACAATATCAGATCCACATAATAT
TTTAAATATAATTCAATCATTTATATTCATTAGTGTTGGTTCATCATTAT
TTTTAAAACTTTTACCAAATATTAGAGGTTTAACCATAATTGTACATCAC
TTTTTTTATTTATTTTTTTTATTTTTATATTTAAAAATCATAATAATAAT
TATAATAAAAAATAATAAGACGGTTGTAATAATTTATATATACAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gap gap included
Contig length 973
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 3455713
End point 3456678
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 2
Link to clone list U16017
List of clone(s) 

est1=FC-BN08F,1,565
est2=FC-BN08Z,566,973
Translated Amino Acid sequence 
wi*k*iivhqlnilmviq*gvfggqldtr*vmknqihv*nvigkl*lgnmgngghendyy
mvdnsplkvyscandmcngnntcigdnnigdlcyyctnyhestsiqaskngiqccsnfnf
*le*KFFFSYRISILPLFRISIDFFDGYCYFRGLNYLHKVLISNLIILFLFIISYSDLTI
WLLNKFL---

---LSMIFNPIDVMPIIIAIQLIYTMIFIFISPIKNELSTSSFKKLNIITSTITISDPHN
ILNIIQSFIFISVGSSLFLKLLPNIRGLTIIVHHFFYLFFLFLYLKIIIIIIIKNNKTVV
IIYIYKKKKKKKKKKKKK
Translated Amino Acid sequence (All Frames) 
Frame A:
ngyknk*lfts*if*w*fnevylvanwilvr**kikfmckm**gncnlaiwamvvmkmii
iwliivl*kfihvlmicvmgithvlviiilviyvtivqiimkvlqyklqrmvfnvvqisi
fnlnenfsfhielvfyhylefplislmvivilgv*iiyikf*yqi*lysfylllviqi*q
ygc*inf*---

---hyq*ysiqlmscql*lqfn*fiq*fsfllvl*kmnyqlhllkn*i**pqqsqyqihi
if*i*fnhlyslvlvhhyf*nfyqilev*p*lyitffiyffyfyi*ks***l**kiirrl
**fiytkkkkkkkkkkkkk

Frame B:
mdikinncspvkyfdgnsmrciwwpigyslgdeksnscvkcnreivtwqygqwws*k*ll
yg***sfkslfmc**yv*we*hmyw***yw*fmlllykls*kyfntsfkewysmlfkfqf
lt*mkiflfi*n*yftii*nfh*fl*wlllf*gfklft*sfnikfnytlfiyy*lfrfnn
mvvk*ifk---

---iindiqsn*chanyncnsidlyndfhfy*sykk*iinfif*kikynnlnnhnirst*
yfkynsiiyih*cwfiiifktftky*rfnhnctslflfiffififknhnnnynkk**dgc
nnlyiqkkkkkkkkkkkk

Frame C:
wi*k*iivhqlnilmviq*gvfggqldtr*vmknqihv*nvigkl*lgnmgngghendyy
mvdnsplkvyscandmcngnntcigdnnigdlcyyctnyhestsiqaskngiqccsnfnf
*le*KFFFSYRISILPLFRISIDFFDGYCYFRGLNYLHKVLISNLIILFLFIISYSDLTI
WLLNKFL---

---LSMIFNPIDVMPIIIAIQLIYTMIFIFISPIKNELSTSSFKKLNIITSTITISDPHN
ILNIIQSFIFISVGSSLFLKLLPNIRGLTIIVHHFFYLFFLFLYLKIIIIIIIKNNKTVV
IIYIYKKKKKKKKKKKKK
own update 2004. 6.23
Homology vs CSM-cDNA 
Query= Contig-U16017-1 (Contig-U16017-1Q)
/CSM_Contig/Contig-U16017-1Q.Seq.d
         (983 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U16017-1 (Contig-U16017-1Q) /CSM_Contig/Conti...  1626  0.0
Contig-U12057-1 (Contig-U12057-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U12073-1 (Contig-U12073-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U04671-1 (Contig-U04671-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U16127-1 (Contig-U16127-1Q) /CSM_Contig/Conti...    38  0.025
Contig-U14921-1 (Contig-U14921-1Q) /CSM_Contig/Conti...    38  0.025
Contig-U11812-1 (Contig-U11812-1Q) /CSM_Contig/Conti...    38  0.025
Contig-U10358-1 (Contig-U10358-1Q) /CSM_Contig/Conti...    38  0.025
Contig-U16588-1 (Contig-U16588-1Q) /CSM_Contig/Conti...    36  0.099
Contig-U15889-1 (Contig-U15889-1Q) /CSM_Contig/Conti...    36  0.099

>Contig-U16017-1 (Contig-U16017-1Q) /CSM_Contig/Contig-U16017-1Q.Seq.d
          Length = 983

 Score = 1626 bits (820), Expect = 0.0
 Identities = 850/850 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatggatataaaaataaataattgttcaccagttaaatattttgatggtaattcaatgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aatggatataaaaataaataattgttcaccagttaaatattttgatggtaattcaatgag 60

                                                                       
Query: 61  gtgtatttggtggccaattggatactcgttaggtgatgaaaaatcaaattcatgtgtaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtgtatttggtggccaattggatactcgttaggtgatgaaaaatcaaattcatgtgtaaa 120

                                                                       
Query: 121 atgtaatagggaaattgtaacttggcaatatgggcaatggtggtcatgaaaatgattatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgtaatagggaaattgtaacttggcaatatgggcaatggtggtcatgaaaatgattatt 180

                                                                       
Query: 181 atatggttgataatagtcctttaaaagtttattcatgtgctaatgatatgtgtaatggga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atatggttgataatagtcctttaaaagtttattcatgtgctaatgatatgtgtaatggga 240

                                                                       
Query: 241 ataacacatgtattggtgataataatattggtgatttatgttactattgtacaaattatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ataacacatgtattggtgataataatattggtgatttatgttactattgtacaaattatc 300

                                                                       
Query: 301 atgaaagtacttcaatacaagcttcaaagaatggtattcaatgttgttcaaatttcaatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgaaagtacttcaatacaagcttcaaagaatggtattcaatgttgttcaaatttcaatt 360

                                                                       
Query: 361 tttaacttgaatgaaaatttttcttttcatatagaattagtattttaccattatttagaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttaacttgaatgaaaatttttcttttcatatagaattagtattttaccattatttagaa 420

                                                                       
Query: 421 tttccattgatttctttgatggttattgttattttaggggtttaaattatttacataaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttccattgatttctttgatggttattgttattttaggggtttaaattatttacataaag 480

                                                                       
Query: 481 ttttaatatcaaatttaattatactctttttatttattattagttattcagatttaacaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttttaatatcaaatttaattatactctttttatttattattagttattcagatttaacaa 540

                                                                       
Query: 541 tatggttgttaaataaatttttaaannnnnnnnnncattatcaatgatattcaatccaat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tatggttgttaaataaatttttaaannnnnnnnnncattatcaatgatattcaatccaat 600

                                                                       
Query: 601 tgatgtcatgccaattataattgcaattcaattgatttatacaatgattttcatttttat 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgatgtcatgccaattataattgcaattcaattgatttatacaatgattttcatttttat 660

                                                                       
Query: 661 tagtcctataaaaaatgaattatcaacttcatcttttaaaaaattaaatataataacctc 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tagtcctataaaaaatgaattatcaacttcatcttttaaaaaattaaatataataacctc 720

                                                                       
Query: 721 aacaatcacaatatcagatccacataatattttaaatataattcaatcatttatattcat 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aacaatcacaatatcagatccacataatattttaaatataattcaatcatttatattcat 780

                                                                       
Query: 781 tagtgttggttcatcattatttttaaaacttttaccaaatattagaggtttaaccataat 840
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tagtgttggttcatcattatttttaaaacttttaccaaatattagaggtttaaccataat 840

                     
Query: 841 tgtacatcac 850
           ||||||||||
Sbjct: 841 tgtacatcac 850


 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 919 gacggttgtaataatttatatatac 943
           |||||||||||||||||||||||||
Sbjct: 919 gacggttgtaataatttatatatac 943


>Contig-U12057-1 (Contig-U12057-1Q) /CSM_Contig/Contig-U12057-1Q.Seq.d
          Length = 1371

 Score = 42.1 bits (21), Expect = 0.002
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 259 ataataatattggtgatttat 279
           |||||||||||||||||||||
Sbjct: 873 ataataatattggtgatttat 893


>Contig-U12073-1 (Contig-U12073-1Q) /CSM_Contig/Contig-U12073-1Q.Seq.d
          Length = 922

 Score = 40.1 bits (20), Expect = 0.006
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 7  tataaaaataaataattgtt 26
          ||||||||||||||||||||
Sbjct: 97 tataaaaataaataattgtt 78


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 42,534
Number of Sequences: 8402
Number of extensions: 42534
Number of successful extensions: 5509
Number of sequences better than 10.0: 684
length of query: 983
length of database: 8,075,542
effective HSP length: 16
effective length of query: 967
effective length of database: 7,941,110
effective search space: 7679053370
effective search space used: 7679053370
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 3. 8
Homology vs DNA 
Query= Contig-U16017-1 (Contig-U16017-1Q) /CSM_Contig/Contig-U16017-1Q.Seq.d
         (983 letters)

Database: ddbj_B
           98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU284851) Dictyostelium discoideum gamete cDNA clone:FC-BN0...   912   0.0    2
(AU284852) Dictyostelium discoideum gamete cDNA clone:FC-BN0...   545   e-150  1
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen...    32   1e-04  13
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8...    38   6e-04  14
(AX345792) Sequence 863 from Patent WO0200928.                     38   0.002  5
(CP000361) Arcobacter butzleri RM4018, complete genome.            38   0.003  17
(CR382401) Plasmodium falciparum chromosome 6, complete sequ...    34   0.004  11
(CR855387) Zebrafish DNA sequence from clone DKEY-282H22 in ...    42   0.005  7
(AL844509) Plasmodium falciparum chromosome 13.                    36   0.006  12
(AL049185) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    34   0.011  14
(CP000882) Hemiselmis andersenii chromosome 2, complete sequ...    38   0.012  9
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423...    34   0.013  13
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    34   0.013  12
(AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7...    30   0.015  14
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s...    32   0.019  15
(AC004157) Plasmodium falciparum chromosome 12 clone PFYAC29...    36   0.024  6
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet...    36   0.025  18
(AE014833) Plasmodium falciparum 3D7 chromosome 10 section 5...    36   0.029  12
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098...    36   0.030  9
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    30   0.043  14
(AM459122) Vitis vinifera contig VV78X238055.10, whole genom...    36   0.048  4
(AE014830) Plasmodium falciparum 3D7 chromosome 10 section 2...    38   0.053  8
(AM469829) Vitis vinifera contig VV78X104896.13, whole genom...    40   0.053  6
(CV717575) UCRCS08_0009D08_r Parent Washington Navel Orange ...    40   0.061  3
(CR394545) Zebrafish DNA sequence from clone CH211-103E6 in ...    38   0.074  8
(AX458634) Sequence 180 from Patent WO0246454.                     34   0.074  6
(AE014845) Plasmodium falciparum 3D7 chromosome 12, section ...    34   0.075  12
(AE014836) Plasmodium falciparum 3D7 chromosome 11 section 1...    32   0.076  12
(AC116551) Dictyostelium discoideum chromosome 2 map complem...    34   0.084  7
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ...    36   0.086  11
(AE014838) Plasmodium falciparum 3D7 chromosome 11 section 3...    34   0.087  10
(AL929354) Plasmodium falciparum strain 3D7, chromosome 5, s...    38   0.10   11
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome.         36   0.12   17
(AC016120) Homo sapiens clone RP11-27N22, WORKING DRAFT SEQU...    38   0.12   6
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135...    38   0.13   9
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975...    34   0.13   6
(CP000963) Clostridium botulinum A3 str. Loch Maree plasmid ...    34   0.13   10
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8...    38   0.15   13
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s...    42   0.15   12
(AM466568) Vitis vinifera contig VV78X116574.7, whole genome...    50   0.16   1
(AL049711) Arabidopsis thaliana DNA chromosome 3, BAC clone ...    50   0.16   1
(AF049236) Arabidopsis thaliana putative transmembrane prote...    50   0.16   1
(AB012048) Arabidopsis thaliana gene for sulfate transporter...    50   0.16   1
(CW841811) ET11622.Ds5.04.02.2003.jw88.715 Arabidopsis thali...    50   0.16   1
(CN545856) EST 17800 Ripe Grape Skin Triplex2 Library Vitis ...    50   0.16   1
(AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8...    34   0.16   10
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)...    32   0.17   18
(AL445564) Mycoplasma pulmonis (strain UAB CTIP) complete ge...    32   0.17   13
(DN808437) 76956738 Sea Urchin primary mesenchyme cell cDNA ...    34   0.17   4
(CP000883) Hemiselmis andersenii chromosome 3, complete sequ...    34   0.17   7
(DD061484) Methods and nucleic acids for the analysis of  he...    36   0.17   5
(AX599046) Sequence 386 from Patent WO02077272.                    36   0.17   5
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    40   0.18   14
(AL049183) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    36   0.19   9
(AC114929) Homo sapiens chromosome 5 clone CTD-2013M11, comp...    42   0.19   5
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    36   0.19   12
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255...    34   0.20   16
(AF250284) Amsacta moorei entomopoxvirus, complete genome.         32   0.20   15
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69...    34   0.20   12
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    34   0.21   13
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ...    34   0.22   12
(AF165818) Guillardia theta nucleomorph chromosome 1, comple...    32   0.23   12
(AL929355) Plasmodium falciparum strain 3D7, chromosome 9; s...    34   0.23   11
(AP006628) Onion yellows phytoplasma OY-M DNA, complete genome.    36   0.24   17
(AC021887) Homo sapiens BAC clone RP11-777M17 from 12, compl...    38   0.25   7
(AC005504) Plasmodium falciparum chromosome 12, *** SEQUENCI...    36   0.25   9
(AE014826) Plasmodium falciparum 3D7 chromosome 14 section 1...    34   0.25   10
(FM248889) Caenorhabditis elegans EST, clone  B12_ce4.trans....    44   0.25   2
(CR382400) Plasmodium falciparum chromosome 6, complete sequ...    40   0.27   14
(AE014846) Plasmodium falciparum 3D7 chromosome 12, section ...    32   0.29   14
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s...    32   0.30   12
(CP000726) Clostridium botulinum A str. ATCC 19397, complete...    34   0.31   19
(CS468864) Sequence 55 from Patent EP1748080.                      38   0.32   7
(CS468863) Sequence 54 from Patent EP1748080.                      38   0.32   7
(CS419341) Sequence 55 from Patent WO2006094836.                   38   0.32   7
(CS419340) Sequence 54 from Patent WO2006094836.                   38   0.32   7
(AF538053) Monosiga brevicollis mitochondrion, complete genome.    30   0.32   9
(AC004709) Plasmodium falciparum chromosome 12, *** SEQUENCI...    34   0.32   11
(CR382398) Plasmodium falciparum chromosome 6, complete sequ...    34   0.34   11
(AC210361) Solanum lycopersicum chromosome 7 clone C07HBa021...    38   0.34   5
(AL110118) Human chromosome 14 DNA sequence BAC R-371E8 of l...    38   0.35   2
(AC022538) Homo sapiens chromosome 10 clone RP11-420L7, comp...    40   0.36   7
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-...    32   0.39   11
(AC229735) Medicago truncatula clone mth2-36n12, WORKING DRA...    40   0.40   3
(BW542386) Ciona savignyi cDNA, clone:cscl001d17, 3'end, sin...    42   0.41   2
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117...    34   0.42   8
(AC214284) Populus trichocarpa clone POP076-F15, complete se...    34   0.42   8
(EI865871) CAH1-29C23TR CAA1Ba Cicer arietinum genomic clone...    34   0.45   2
(FG207572) Aabr04296 Antheraea assama fifth instar larval br...    38   0.46   2
(DU307618) 1098473564207 CHORI-243 Ovis aries genomic clone ...    40   0.49   2
(AC230482) Bos taurus clone CH240-507O8, WORKING DRAFT SEQUE...    42   0.50   5
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    32   0.53   15
(DU420107) 1098421062687 CHORI-243 Ovis aries genomic clone ...    40   0.54   2
(CU693449) Zebrafish DNA sequence from clone CH1073-342H5 in...    40   0.56   3
(DD061338) Methods and nucleic acids for the analysis of  he...    36   0.56   5
(AX598900) Sequence 240 from Patent WO02077272.                    36   0.56   5
(AY894835) Phytophthora infestans haplotype Ia mitochondrion...    38   0.57   6
(AC148283) Dasypus novemcinctus clone VMRC5-441G19, WORKING ...    34   0.58   5
(DU514926) 1098609789230 CHORI-243 Ovis aries genomic clone ...    40   0.61   2
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s...    30   0.61   12
(AF099001) Caenorhabditis elegans cosmid R160, complete sequ...    36   0.62   6
(DQ889679) Bacillus cereus strain G9241 plasmid pBC210, comp...    34   0.62   9
(BX890573) Zebrafish DNA sequence from clone DKEYP-90F5 in l...    48   0.63   1
(AC181087) Strongylocentrotus purpuratus clone R3-3029F24, W...    48   0.63   1
(ER563960) 1093015760833 Global-Ocean-Sampling_GS-36-01-01-2...    48   0.63   1
(EJ885675) 1093018415470 Global-Ocean-Sampling_GS-30-02-01-1...    48   0.63   1
(EJ828199) 1093017569810 Global-Ocean-Sampling_GS-30-02-01-1...    48   0.63   1
(EJ315979) 1095403288394 Global-Ocean-Sampling_GS-27-01-01-1...    48   0.63   1
(EJ132797) 1092343573667 Global-Ocean-Sampling_GS-27-01-01-1...    48   0.63   1
(EJ107723) 1092343142875 Global-Ocean-Sampling_GS-27-01-01-1...    48   0.63   1
(EI873148) CAH1-39J1TV CAA1Ba Cicer arietinum genomic clone ...    48   0.63   1
(AC215445) Solanum lycopersicum chromosome 2 clone C02SLe001...    36   0.63   7
(AC117080) Dictyostelium discoideum chromosome 2 map complem...    30   0.63   9
(AC178512) Strongylocentrotus purpuratus clone R3-113H14, WO...    40   0.64   5
(AC179275) Strongylocentrotus purpuratus clone R3-45B19, WOR...    34   0.66   7
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g...    36   0.68   13
(AY898628) Phytophthora infestans haplotype IIb mitochondrio...    38   0.69   6
(AF325528) Lumpy skin disease virus NI-2490 isolate Neethlin...    38   0.69   7
(AF409137) Lumpy skin disease virus NW-LW isolate Neethling ...    38   0.69   7
(AE014841) Plasmodium falciparum 3D7 chromosome 11 section 6...    32   0.70   11
(AC216765) Populus trichocarpa clone POP021-F16, complete se...    46   0.73   7
(AY863213) Smittium culisetae mitochondrion, complete genome.      34   0.73   7
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI...    32   0.78   11
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi...    34   0.78   13
(BB981755) Plasmodium berghei str. ANKA cDNA clone: OK012057...    30   0.78   4
(AC156827) Medicago truncatula chromosome 6 clone mth2-15c17...    40   0.79   5
(BD428911) Method and nucleic acids for pharmacogenomic meth...    34   0.81   4
(AX348390) Sequence 85 from Patent WO0202806.                      34   0.81   4
(U17009) Phytophthora infestans mitochondrion, complete genome.    38   0.82   5
(CT180916) Sus scrofa genomic clone PigE-188J24, genomic sur...    32   0.83   3
(AF081829) Rhipicephalus sanguineus mitochondrial DNA, compl...    44   0.84   4
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-...    34   0.84   9
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2...    32   0.84   10
(DE896698) Macropus eugenii DNA, BAC clone: MEB1-075F11_R, 3...    32   0.86   3
(AC122171) Medicago truncatula clone mth2-23b18, complete se...    38   0.92   7
(AY898627) Phytophthora infestans haplotype IIa mitochondrio...    38   0.96   5
(AL929124) Zebrafish DNA sequence from clone CH211-128D23.         40   1.1    7
(X95276) Plasmodium falciparum complete gene map of plastid-...    34   1.1    5
(CU469169) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   1.1    7
(AC006280) Plasmodium falciparum chromosome 12 clone PFYAC72...    34   1.2    9
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...    30   1.2    14
(AL844507) Plasmodium falciparum chromosome 8.                     34   1.3    12
(AX392737) Sequence 27 from Patent WO0212526.                      32   1.3    7
(AR707084) Sequence 27 from patent US 6933145.                     32   1.3    7
(CU019665) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    36   1.3    2
(CR339049) Zebrafish DNA sequence from clone CH211-165D12 in...    36   1.3    2
(AC188316) Trichinella spiralis chromosome UNK clone TS195-3...    32   1.3    2
(AF160864) Tetrahymena pyriformis mitochondrial DNA, complet...    32   1.4    6
(CP000727) Clostridium botulinum A str. Hall, complete genome.     34   1.4    18
(AX323833) Sequence 321 from Patent WO0192565.                     38   1.4    2
(AC170420) Macaca mulatta clone CH250-258E2, WORKING DRAFT S...    36   1.4    11
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771...    34   1.4    8
(CU468307) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   1.4    5
(BD452655) Diagnosis of Diseases Associated with tumor suppr...    32   1.5    5
(AX345729) Sequence 800 from Patent WO0200928.                     32   1.5    5
(AX251134) Sequence 102 from Patent WO0168912.                     32   1.5    5
(AC170235) Bos taurus clone CH240-207L11, WORKING DRAFT SEQU...    34   1.5    6
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1...    32   1.5    14
(EF494739) Blastocystis sp. DMP/02-328 mitochondrion, comple...    32   1.6    6
(AC187298) Canis familiaris chromosome X, clone XX-93B19, co...    34   1.6    7
(ER937207) AF__Bb0010A10f AF__Bb Aquilegia formosa genomic, ...    36   1.7    2
(EA266237) Sequence 427 from patent US 7241867.                    38   1.7    3
(DD419389) GENES OF AN OTITIS MEDIA ISOLATE OF NONTYPEABLE H...    38   1.7    3
(CQ872814) Sequence 427 from Patent WO2004078949.                  38   1.7    3
(AF327976) Bellota cf. wheeleri MCH-2001 16S ribosomal RNA, ...    32   1.7    2
(DB775494) Apis mellifera head cDNA, RIKEN full-length enric...    36   1.7    2
(AQ720899) HS_5536_B2_C01_SP6E RPCI-11 Human Male BAC Librar...    34   1.8    2
(CT025778) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    40   1.8    5
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6...    38   1.8    11
(AM468140) Vitis vinifera contig VV78X154850.11, whole genom...    36   1.8    6
(EI305175) GM_WBc0033A08.f GM_WBc Glycine max genomic clone ...    42   1.9    2
(EJ762306) 1092963145877 Global-Ocean-Sampling_GS-30-02-01-1...    36   1.9    2
(AG303510) Mus musculus molossinus DNA, clone:MSMg01-083F20....    40   1.9    2
(AC122835) Mus musculus BAC clone RP23-187I18 from 3, comple...    34   1.9    6
(AC024243) Homo sapiens BAC clone RP11-528I4 from 4, complet...    36   1.9    6
(CU463045) Medicago truncatula chromosome 5 clone mth4-4e12,...    42   1.9    4
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    30   1.9    13
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g...    34   1.9    18
(AP010264) Solanum lycopersicum DNA, chromosome 8, clone: C0...    38   2.0    6
(FI233694) CccaBb011-I6JR CccABb Cajanus cajan genomic clone...    38   2.0    2
(AC129885) Didelphis virginiana clone LB3-35M17, complete se...    36   2.0    6
(AM483868) Vitis vinifera, whole genome shotgun sequence, co...    34   2.0    6
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    32   2.0    15
(AY521260) Dialeurodes sp. PB-2004 cytochrome b (CYTB) gene,...    34   2.0    4
(CZ988624) 204103 Tomato MboI BAC Library Solanum lycopersic...    38   2.0    2
(EG552653) MM02P05_XP Sugar Beet germination cDNA library Be...    28   2.0    5
(EI902784) VUH2-41D8TV VUUBBa (VUH2) Vigna unguiculata genom...    36   2.0    2
(AC186252) Oryctolagus cuniculus clone LB1-196E2, WORKING DR...    32   2.0    7
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2...    32   2.0    11
(DQ642846) Plasmodium falciparum HB3 apicoplast, complete ge...    34   2.0    6
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7...    34   2.1    14
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572...    32   2.1    11
(EJ324700) 1095460000097 Global-Ocean-Sampling_GS-27-01-01-1...    44   2.1    2
(AM430425) Vitis vinifera contig VV78X049119.5, whole genome...    38   2.1    2
(CT332297) Sus scrofa genomic clone CH242-384E8, genomic sur...    42   2.1    2
(DV584313) AGENCOURT_61886452 NIH_ZGC_14 Danio rerio cDNA cl...    44   2.2    2
(AM468839) Vitis vinifera contig VV78X049608.3, whole genome...    38   2.2    3
(AL354854) Human DNA sequence from clone RP11-572H4 on chrom...    34   2.2    6
(EJ770227) 1092966001301 Global-Ocean-Sampling_GS-30-02-01-1...    36   2.2    2
(AY077834) Sheeppox virus NISKHI, complete genome.                 32   2.2    8
(AP010178) Lotus japonicus genomic DNA, chromosome 2, clone:...    32   2.3    8
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet...    44   2.3    17
(CP000728) Clostridium botulinum F str. Langeland, complete ...    34   2.3    17
(AC115584) Dictyostelium discoideum chromosome 2 map complem...    38   2.3    6
(CR382399) Plasmodium falciparum chromosome 6, complete sequ...    32   2.3    13
(AC005506) Plasmodium falciparum chromosome 12 clone PFYAC35...    32   2.4    12
(AM485561) Vitis vinifera contig VV78X191004.9, whole genome...    30   2.4    6
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4...    32   2.4    10
(FB571304) Sequence 171 from Patent EP1865317.                     34   2.4    7
(AL929351) Plasmodium falciparum strain 3D7, chromosome 5, s...    32   2.4    11
(ES388323) MUS13-K10.x1d-t SHGC-MUS Mytilus californianus cD...    36   2.4    2
(AC021972) Homo sapiens chromosome 12 clone RP11-734E19 map ...    42   2.4    5
(CU570662) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   2.4    5
(AP006142) Lotus japonicus genomic DNA, chromosome 2, clone:...    46   2.5    1
(AM471744) Vitis vinifera contig VV78X236578.4, whole genome...    46   2.5    1
(AM432297) Vitis vinifera contig VV78X068842.3, whole genome...    46   2.5    1
(AL353592) Human DNA sequence from clone RP11-569O12 on chro...    46   2.5    1
(AC010321) Homo sapiens chromosome 16 clone CTD-2540M10, com...    46   2.5    1
(AC002565) Human Chromosome 16 BAC clone CIT987SK-A-598D4, c...    46   2.5    1
(AC152238) Bos taurus clone CH240-8N15, WORKING DRAFT SEQUEN...    46   2.5    1
(AC131524) Rattus norvegicus clone CH230-94G14, WORKING DRAF...    46   2.5    1
(AC126664) Rattus norvegicus clone CH230-76J12, WORKING DRAF...    46   2.5    1
(AC119438) Rattus norvegicus clone CH230-371O1, *** SEQUENCI...    46   2.5    1
(AC098024) Rattus norvegicus clone CH230-54C2, WORKING DRAFT...    46   2.5    1
(CU928702) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   2.5    1
(CU861942) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   2.5    1
(AP007763) Lotus japonicus genomic DNA, chromosome 2, clone:...    46   2.5    1
(AC221094) Bos taurus clone CH240-392P15, WORKING DRAFT SEQU...    46   2.5    1
(AC175278) Bos taurus clone CH240-524G2, WORKING DRAFT SEQUE...    46   2.5    1
(AC170043) Muntiacus reevesi clone CH245-158D17, WORKING DRA...    46   2.5    1
(AC018771) Homo sapiens clone RP11-114H18, LOW-PASS SEQUENCE...    46   2.5    1
(AC013755) Homo sapiens clone RP11-1I22, WORKING DRAFT SEQUE...    46   2.5    1
(EJ492585) 1095403548835 Global-Ocean-Sampling_GS-28-01-01-1...    46   2.5    1
(AL440223) T7 end of clone BD0AA010H03 of library BD0AA from...    46   2.5    1
(DE943367) Macropus eugenii DNA, BAC clone: MEB1-138K18_R, 3...    46   2.5    1
(CC111959) NDL.24A11.T7 Notre Dame Liverpool Aedes aegypti g...    46   2.5    1
(BZ238649) CH230-506P18.TV CHORI-230 Segment 2 Rattus norveg...    46   2.5    1
(DB880140) Populus nigra mRNA, clone: PnFL2-032_D22, 5'end.        46   2.5    1
(DB877150) Populus nigra mRNA, clone: PnFL2-014_H21, 5'end.        46   2.5    1
(CB721574) jnn612A05.f op Ornithodoros porcinus porcinus cDN...    46   2.5    1
(EK121572) 1092963535521 Global-Ocean-Sampling_GS-31-01-01-1...    34   2.5    3
(AL031744) Plasmodium falciparum DNA from MAL1P1.                  36   2.5    7
(CU487213) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   2.6    6
(AX344569) Sequence 20 from Patent WO0200932.                      32   2.6    12
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    32   2.7    14
(AC215437) Solanum lycopersicum chromosome 2 clone C02HBa032...    32   2.7    8
(AM463333) Vitis vinifera contig VV78X189705.4, whole genome...    36   2.8    3
(AC010490) Homo sapiens chromosome 5 clone CTD-2333M24, comp...    36   2.8    7
(EK028545) 1092955389669 Global-Ocean-Sampling_GS-31-01-01-1...    34   2.8    3
(AF200832) Drosophila sechellia type line mitochondrion, com...    34   2.9    4
(AF200838) Drosophila simulans isolate NC48 mitochondrion, c...    34   2.9    4
(AC149038) Medicago truncatula chromosome 7 clone mth2-29a5,...    38   2.9    6
(AF200837) Drosophila simulans isolate NC37 mitochondrion, c...    34   2.9    4
(AF200833) Drosophila simulans isolate TT00 mitochondrion, c...    34   2.9    4
(AF200836) Drosophila simulans isolate HW09 mitochondrion, c...    34   2.9    4
(AF200835) Drosophila simulans isolate HW00 mitochondrion, c...    34   2.9    4
(AF200834) Drosophila simulans isolate TT01 mitochondrion, c...    34   2.9    4
(AM457345) Vitis vinifera contig VV78X251258.1, whole genome...    40   3.0    2
(AC092874) Sus scrofa clone RP44-326F1, complete sequence.         36   3.0    7
(AL049180) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    32   3.1    9
(AM459909) Vitis vinifera contig VV78X148099.2, whole genome...    28   3.1    5
(AC202513) Medicago truncatula clone mth2-60a13, complete se...    44   3.2    5
(EL909978) INIT2_36_D05.g1_A006 G5 trophont cDNA (INIT2) Ich...    34   3.2    3
(AF467886) Crioceris duodecimpunctata mitochondrion, complet...    38   3.3    4
(AP010136) Lotus japonicus genomic DNA, clone: LjT19A14, TM0...    36   3.3    6
(AJ242872) Ceratitis capitata complete mitochondrial genome.       34   3.4    4
(AM473335) Vitis vinifera contig VV78X047472.6, whole genome...    36   3.4    4
(DE984084) Macropus eugenii DNA, BAC clone: MEB1-193P03_F, 5...    30   3.4    3
(CP000061) Aster yellows witches'-broom phytoplasma AYWB, co...    36   3.5    15
(CR361545) Zebrafish DNA sequence from clone DKEY-45K13 in l...    36   3.5    4
(CU856027) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   3.5    6
(AC215450) Solanum lycopersicum chromosome 2 clone C02SLe002...    38   3.5    6
(EJ962520) 1093022013433 Global-Ocean-Sampling_GS-30-02-01-1...    30   3.6    4
(AP008027) Lotus japonicus genomic DNA, chromosome 4, clone:...    40   3.6    7
(AC224694) Bos taurus clone CH240-478N3, WORKING DRAFT SEQUE...    38   3.7    6
(AP010063) Lotus japonicus genomic DNA, chromosome 6, clone:...    34   3.7    7
(AM462463) Vitis vinifera contig VV78X083207.16, whole genom...    32   3.7    4
(BX510923) Zebrafish DNA sequence from clone CH211-214J8 in ...    34   3.8    8
(CP000414) Leuconostoc mesenteroides subsp. mesenteroides AT...    36   3.8    21
(AE017308) Mycoplasma mobile 163K complete genome.                 32   3.8    17
(EJ281420) 1095366055081 Global-Ocean-Sampling_GS-27-01-01-1...    32   3.8    3
(AL844506) Plasmodium falciparum chromosome  7.                    32   3.9    12
(AL031745) Plasmodium falciparum DNA from MAL1P2.                  34   3.9    10
(AM436603) Vitis vinifera contig VV78X183189.23, whole genom...    42   4.1    3
(AL929359) Plasmodium falciparum strain 3D7, chromosome 9; s...    32   4.1    10
(EJ053879) 1095456015674 Global-Ocean-Sampling_GS-26-01-01-1...    34   4.2    3
(EK346365) 1095467538620 Global-Ocean-Sampling_GS-31-01-01-1...    36   4.3    3
(DB780831) Apis mellifera head cDNA, RIKEN full-length enric...    32   4.3    3
(AX344573) Sequence 24 from Patent WO0200932.                      38   4.3    9
(BX119904) Human DNA sequence from clone RP11-232D9 on chrom...    36   4.4    7
(AC152407) Medicago truncatula clone mth2-77l23, complete se...    32   4.4    8
(CR848841) Zebrafish DNA sequence from clone DKEY-202I12 in ...    38   4.5    9
(AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont...    34   4.5    12
(AC139748) Medicago truncatula clone mth2-15o24, complete se...    32   4.6    9
(AC118885) Rattus norvegicus clone CH230-479J14, *** SEQUENC...    34   4.6    2
(DB763470) Apis mellifera head cDNA, RIKEN full-length enric...    38   4.6    2
(AC099202) Rattus norvegicus clone CH230-125E19, *** SEQUENC...    34   4.6    2
(AC048381) Homo sapiens chromosome 3 clone RP11-547K2 map 3,...    36   4.6    7
(AC147329) Pan troglodytes BAC clone RP43-21F14 from chromos...    32   4.7    2
(AC080074) Homo sapiens chromosome 7 clone RP11-338F10, WORK...    32   4.7    2
(CP000881) Hemiselmis andersenii chromosome 1, complete sequ...    34   4.7    9
(AC073048) Homo sapiens BAC clone RP11-54E21 from 7, complet...    32   4.7    2
(CO729516) Hm_pupb_01E05_pBACe3.6_t7 Heliconius melpomene pu...    30   4.7    4
(AM285321) Spiroplasma citri GII3-3X chromosome, contig Cont...    30   4.7    8
(DB773037) Apis mellifera head cDNA, RIKEN full-length enric...    32   4.8    3
(DB771844) Apis mellifera head cDNA, RIKEN full-length enric...    32   4.8    3
(DB762935) Apis mellifera head cDNA, RIKEN full-length enric...    38   4.8    2
(AC189290) Brassica rapa subsp. pekinensis clone KBrB025O08,...    32   4.8    2
(DB771494) Apis mellifera head cDNA, RIKEN full-length enric...    32   4.8    3
(CT573339) M.truncatula DNA sequence from clone MTH2-82H11 o...    34   4.8    2
(CR450811) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    36   4.9    8
(AC173204) Bos taurus clone CH240-153J9, *** SEQUENCING IN P...    42   4.9    4
(AM448960) Vitis vinifera contig VV78X217741.6, whole genome...    34   4.9    3
(AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3...    34   4.9    11
(AC166011) Oryctolagus cuniculus clone LB1-252O18, WORKING D...    36   4.9    4
(EL909620) INIT2_33_F04.b1_A006 G5 trophont cDNA (INIT2) Ich...    34   5.0    3
(AE016826) Buchnera aphidicola str. Bp (Baizongia pistaciae)...    32   5.0    13
(CR931760) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    36   5.0    5
(AL953887) Zebrafish DNA sequence from clone CH211-199L3 in ...    36   5.0    5
(AC144691) Didelphis virginiana clone LB3-241H11, complete s...    42   5.1    6
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699...    30   5.1    19
(DB758272) Apis mellifera head cDNA, RIKEN full-length enric...    32   5.1    3
(AP005672) Physcomitrella patens subsp. patens chloroplast D...    32   5.1    9
(AC192179) Pan troglodytes BAC clone CH251-347B7 from chromo...    34   5.1    8
(AQ792973) HS_5304_A2_F03_T7A RPCI-11 Human Male BAC Library...    32   5.2    3
(AX349036) Sequence 494 from Patent WO0202807.                     32   5.2    7
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6...    32   5.2    9
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214...    32   5.2    10
(AL731569) Human DNA sequence from clone RP11-77P6 on chromo...    38   5.2    4
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5...    34   5.3    10
(AM480104) Vitis vinifera contig VV78X019176.3, whole genome...    34   5.3    2
(EL926329) NY4ThAmp1_1_H09.g1_A039 NY4 theronts: amplified l...    36   5.4    2
(EL912398) INIT2_51_G03.g1_A006 G5 trophont cDNA (INIT2) Ich...    34   5.4    3
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    34   5.4    10
(AC109531) Rattus norvegicus clone CH230-248I24, *** SEQUENC...    42   5.5    4
(AM487000) Vitis vinifera contig VV78X250837.10, whole genom...    34   5.5    4
(DV184153) CT032_C01_CT032_3700_91.ab1 C. tentans tissue cul...    34   5.6    2
(CR956619) M.truncatula DNA sequence from clone MTH2-65F22 o...    40   5.6    7
(AM429002) Vitis vinifera contig VV78X060391.9, whole genome...    38   5.8    3
(AY077832) Sheeppox virus 10700-99 strain TU-V02127, complet...    32   5.9    7
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595...    32   5.9    9
(AY077833) Sheeppox virus A, complete genome.                      32   5.9    7
(AC157930) Mus musculus chromosome 5, clone RP24-151E22, com...    34   6.0    5
(EC823141) SME00001597 esmbsro2 Sawyeria marylandensis cDNA,...    40   6.0    2
(CU311190) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   6.0    7
(DX521093) GH_MBb0051N13f GH_MBb Gossypium hirsutum genomic ...    32   6.1    2
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    32   6.2    18
(CG816036) SOYCC12TH LargeInsertSoybeanGenLib Glycine max ge...    32   6.2    2
(AF147524) Palicourea perquadrangularis ribosomal protein S1...    34   6.3    2
(CZ544648) SRAA-aad57b04.g1 Strongyloides ratti whole genome...    32   6.3    2
(ER874587) MUGQ_CH252P263H20Sp6_CN540_074 CHORI-252 Vervet M...    34   6.3    2
(EI288217) GM_WBc0008L15.f GM_WBc Glycine max genomic clone ...    32   6.3    2
(EI297646) GM_WBc0022F22.r GM_WBc Glycine max genomic clone ...    32   6.3    2
(BX890579) Zebrafish DNA sequence from clone CH211-151N4 in ...    44   6.4    8
(ET955357) CHO_OF568xf04r1.ab1 CHO_OF Nicotiana tabacum geno...    34   6.4    2
(AP010569) Lotus japonicus genomic DNA, chromosome 6, clone:...    32   6.4    5
(CU252951) Equus caballus GSS, BAC clone CH241-401D15, SP6 e...    34   6.4    2
(CR855397) Zebrafish DNA sequence from clone CH73-77E20 in l...    36   6.4    5
(DX426179) BE1048_E13_F IASMA L1 HindIII BAC library Vitis v...    34   6.4    2
(BX005436) Zebrafish DNA sequence from clone DKEY-9A8 in lin...    34   6.4    6
(AC091989) Homo sapiens chromosome 5 clone RP11-76H13, compl...    32   6.5    6
(AZ842923) 2M0141O04R Mouse 10kb plasmid UUGC1M library Mus ...    32   6.5    2
(EL602182) He_pwd_0197A11_M13R Heliconius erato pooled wing ...    36   6.6    2
(AL139235) Human DNA sequence *** SEQUENCING CANCELLED *** f...    34   6.7    6
(EL912313) INIT2_51_G03.b1_A006 G5 trophont cDNA (INIT2) Ich...    34   6.7    3
(GE354450) 289180289 Nasonia vitripennis Male Pupae Nasonia ...    40   6.8    2
(BX005474) Zebrafish DNA sequence from clone CH211-141E22 in...    36   6.8    5
(EL905654) INIT2_5_A06.b1_A006 G5 trophont cDNA (INIT2) Icht...    34   6.8    3
(AX344565) Sequence 16 from Patent WO0200932.                      32   6.8    11
(FL446782) 25279831 CERES-505 Zea mays cDNA clone 1612771 3'...    36   6.9    2
(AC220060) Solanum lycopersicum chromosome 11 clone C11HBa03...    36   7.0    8
(CR955007) Medicago truncatula chromosome 5 clone mte1-58b20...    32   7.0    9
(AC137080) Medicago truncatula chromosome 6 clone mth2-9a7, ...    36   7.0    6
(AC216652) Solanum lycopersicum chromosome 6 clone C06HBa022...    34   7.1    6
(AL935181) Zebrafish DNA sequence from clone CH211-162K9.          32   7.1    7
(AC187478) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB...    40   7.1    5
(AP001863) Homo sapiens genomic DNA, chromosome 4q22-q24, cl...    36   7.2    4
(CU640481) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   7.3    9
(AE014824) Plasmodium falciparum 3D7 chromosome 14 section 9...    32   7.3    13
(AJ294725) Astasia longa complete chloroplast genome.              34   7.4    6
(ER802973) PPTHH88TF Solanum tuberosum RHPOTKEY BAC ends Sol...    36   7.4    2
(AF030694) Plasmodium falciparum strain Dd2 heat shock prote...    34   7.4    7
(AC208992) Populus trichocarpa clone JGIACSB1089-D05, comple...    36   7.5    5
(AC178259) Strongylocentrotus purpuratus clone R3-3087A12, W...    34   7.5    7
(AM462853) Vitis vinifera, whole genome shotgun sequence, co...    34   7.6    4
(EL904961) G5ThAmp1_3_F05.g1_A006 G5 theronts: amplified lib...    34   7.6    3
(AC146595) Mus musculus BAC clone RP24-164G18 from chromosom...    36   7.7    6
(AM430065) Vitis vinifera contig VV78X096065.4, whole genome...    42   7.8    2
(BZ603015) WHACX19TR Human MCF7 breast cancer cell line libr...    34   7.8    2
(EL926701) NY4ThAmp1_4_H09.g1_A039 NY4 theronts: amplified l...    34   7.8    3
(AC217590) Populus trichocarpa clone POP067-L23, complete se...    32   7.9    7
(FH239581) CHO_OF3103xf02r1.ab1 CHO_OF3 Nicotiana tabacum ge...    36   7.9    2
(AL445220) Human DNA sequence from clone RP11-317B3 on chrom...    36   7.9    5
(CU062486) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    40   8.0    5
(EK107169) 1092963062504 Global-Ocean-Sampling_GS-31-01-01-1...    38   8.1    2
(AF303741) Chilo iridescent virus complete genome.                 30   8.1    12
(AC005505) Plasmodium falciparum chromosome 12 clone PFYAC18...    34   8.1    8
(AC010595) Homo sapiens chromosome 5 clone CTC-480C2, comple...    36   8.2    6
(CU915693) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   8.2    5
(AL357139) Human DNA sequence from clone RP11-793L10 on chro...    32   8.3    8
(AC161527) Mus musculus chromosome 3, clone RP23-174B21, com...    34   8.4    7
(AM485182) Vitis vinifera contig VV79X006335.3, whole genome...    38   8.4    4
(AM486222) Vitis vinifera, whole genome shotgun sequence, co...    40   8.5    5
(ET029840) PST25602-NR MICB2 Mus musculus genomic clone PST2...    40   8.5    2
(AC094218) Rattus norvegicus clone CH230-2P8, *** SEQUENCING...    36   8.7    6
(CP000939) Clostridium botulinum B1 str. Okra, complete genome.    34   8.8    13
(BH162644) ENTSQ92TR Entamoeba histolytica Sheared DNA Entam...    42   8.8    2
(DU949301) 213944 Tomato MboI BAC Library Solanum lycopersic...    36   8.9    2
(EK102946) 1092963027706 Global-Ocean-Sampling_GS-31-01-01-1...    38   8.9    2
(BD061520) Genome DNA of symbiotic bacteria of aphid.              32   9.1    15
(AR409405) Sequence 1 from patent US 6632935.                      32   9.1    15
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum...    32   9.1    15
(CP001056) Clostridium botulinum B str. Eklund 17B, complete...    36   9.1    18
(AC174909) Bos taurus clone CH240-163G12, WORKING DRAFT SEQU...    36   9.1    5
(AC172298) Glycine max clone gmp1-125b19, complete sequence.       36   9.2    6
(ED805095) MG__Bb0082K03r MG__Bb Mimulus guttatus genomic, g...    38   9.3    2
(AL035475) Plasmodium falciparum MAL4P2.                           34   9.3    9
(EJ794062) 1093017391057 Global-Ocean-Sampling_GS-30-02-01-1...    38   9.3    2
(AL590065) Human DNA sequence from clone RP11-307A17 on chro...    38   9.6    6
(Z98551) Plasmodium falciparum MAL3P6.                             34   9.6    9
(AC212597) Pan troglodytes BAC clone CH251-582D9 from chromo...    34   9.6    8
(AC084701) Homo sapiens chromosome 18, clone RP11-1005F9, co...    36   9.7    6
(CU468227) Zebrafish DNA sequence from clone CH73-379C22 in ...    44   9.8    1
(CR381614) Zebrafish DNA sequence from clone DKEY-72G4 in li...    44   9.8    1
(BX571947) Zebrafish DNA sequence from clone DKEY-162F21 in ...    44   9.8    1
(AL928618) Zebrafish DNA sequence from clone CH211-10O8.           44   9.8    1
(AC154902) Mus musculus BAC clone RP24-85I19 from chromosome...    44   9.8    1
(AC126050) Mus musculus BAC clone RP23-236L17 from 1, comple...    44   9.8    1
(AC113597) Mus musculus chromosome 1, clone RP23-375F6, comp...    44   9.8    1
(AC084287) Mus Musculus S train C57BL6/J chromosome 1 BAC,  ...    44   9.8    1
(AM467915) Vitis vinifera contig VV78X053580.1, whole genome...    44   9.8    1
(AM458600) Vitis vinifera contig VV78X055594.19, whole genom...    44   9.8    1
(AC217571) Populus trichocarpa clone POP067-P04, complete se...    44   9.8    1
(AC209037) Populus trichocarpa clone POP004-L17, complete se...    44   9.8    1
(AC182657) Populus trichocarpa clone Pop1-122I6, complete se...    44   9.8    1
(AC157893) Medicago truncatula chromosome 7 clone mth2-7m13,...    44   9.8    1
(AC152184) Medicago truncatula chromosome 7 clone mte1-61c3,...    44   9.8    1
(AC146752) Medicago truncatula clone mth2-62d4, complete seq...    44   9.8    1
(AC137832) Medicago truncatula chromosome 6 clone mth2-22i17...    44   9.8    1
(DI012167) EXPRESSION VECTOR CONTAINING LECTIN GENE REGULATI...    44   9.8    1
(DD156880) Means and methods for improved treatment of cance...    44   9.8    1
(DD156328) Means and methods for improved treatment of cance...    44   9.8    1
(DD144740) Means and methods for improved treatment of cance...    44   9.8    1
(DD142671) Means and methods for improved treatment of cance...    44   9.8    1
(DD134569) Means and methods for improved treatment of cance...    44   9.8    1
(CS623040) Sequence 658 from Patent WO2003013537.                  44   9.8    1
(CQ869730) Sequence 151 from Patent WO2004074320.                  44   9.8    1
(AX707890) Sequence 658 from Patent WO03013536.                    44   9.8    1
(AX706960) Sequence 658 from Patent WO03013534.                    44   9.8    1
(AX344819) Sequence 244 from Patent WO0200927.                     44   9.8    1
(AX281223) Sequence 88 from Patent WO0177377.                      44   9.8    1
(AR569383) Sequence 2 from patent US 6762297.                      44   9.8    1
(AR453111) Sequence 88 from patent US 6677731.                     44   9.8    1
(AC187026) Canis Familiaris chromosome 17, clone XX-266E21, ...    44   9.8    1
(Z97885) Rhipicephalus turanicus mitochondrial 16S ribosomal...    44   9.8    1
(Z97884) Rhipicephalus sanguineus mitochondrial 16S ribosoma...    44   9.8    1
(EF444995) Homo sapiens ubiquitin ligase protein MIB1 (MIB1)...    44   9.8    1
(AL160060) Human DNA sequence from clone RP11-207K8 on chrom...    44   9.8    1
(AK056810) Homo sapiens cDNA FLJ32248 fis, clone PROST1000123.     44   9.8    1
(AC207098) Homo sapiens FOSMID clone ABC9-43913400B7 from ch...    44   9.8    1
(AC108130) Homo sapiens chromosome 5 clone RP11-84B12, compl...    44   9.8    1
(AC093860) Homo sapiens BAC clone RP11-538D9 from 4, complet...    44   9.8    1
(AC091060) Homo sapiens chromosome 18, clone RP11-723J4, com...    44   9.8    1
(AC091038) Homo sapiens chromosome 18, clone RP11-1015N5, co...    44   9.8    1
(AC023051) Homo sapiens 12 BAC RP11-666F17 (Roswell Park Can...    44   9.8    1
(AC010588) Homo sapiens chromosome 5 clone CTC-409M18, compl...    44   9.8    1
(AC008505) Homo sapiens chromosome 5 clone CTC-445B21, compl...    44   9.8    1
(AC005058) Homo sapiens BAC clone CTB-54D4 from 7q31, comple...    44   9.8    1
(AC157269) Rhinolophus ferrumequinum clone VMRC7-382A21, WOR...    44   9.8    1
(AC152430) Bos taurus clone CH240-5D14, WORKING DRAFT SEQUEN...    44   9.8    1
(AC151048) Dasypus novemcinctus clone VMRC5-426N14, WORKING ...    44   9.8    1
(AC137382) Rattus norvegicus clone CH230-unknown, *** SEQUEN...    44   9.8    1
(AC135942) Rattus norvegicus clone CH230-462D13, *** SEQUENC...    44   9.8    1
(AC133369) Rattus norvegicus clone CH230-414B21, WORKING DRA...    44   9.8    1
(AC118411) Rattus norvegicus clone CH230-219D24, *** SEQUENC...    44   9.8    1
(AC115376) Rattus norvegicus clone CH230-38C15, *** SEQUENCI...    44   9.8    1
(AC112549) Rattus norvegicus clone CH230-233N22, *** SEQUENC...    44   9.8    1
(AC098193) Rattus norvegicus clone CH230-56K11, *** SEQUENCI...    44   9.8    1
(AC098192) Rattus norvegicus clone CH230-203P3, *** SEQUENCI...    44   9.8    1
(AC098158) Rattus norvegicus clone CH230-41C9, WORKING DRAFT...    44   9.8    1
(AC097866) Rattus norvegicus clone CH230-81N18, WORKING DRAF...    44   9.8    1
(AC096388) Rattus norvegicus clone CH230-66C10, WORKING DRAF...    44   9.8    1
(CU694521) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.8    1
(AC079428) Mus musculus chromosome 16 clone RP23-122E20, WOR...    44   9.8    1
(CT009547) Human DNA sequence *** SEQUENCING CANCELLED *** f...    44   9.8    1
(CR954962) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   9.8    1
(CR382368) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   9.8    1
(BX936444) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   9.8    1
(AP008195) Lotus japonicus genomic DNA, chromosome 3, clone:...    44   9.8    1
(AP007847) Lotus japonicus genomic DNA, chromosome 6, clone:...    44   9.8    1
(AP001905) Homo sapiens genomic DNA, chromosome 18q12 clone:...    44   9.8    1
(AP001352) Homo sapiens genomic DNA, chromosome 18p11.2 clon...    44   9.8    1
(AP001195) Homo sapiens genomic DNA, chromosome 18q12 clone:...    44   9.8    1
(AL591134) Human DNA sequence *** SEQUENCING IN PROGRESS ***...    44   9.8    1
(AL157390) Human DNA sequence *** SEQUENCING CANCELLED *** f...    44   9.8    1
(AC225504) Medicago truncatula clone mth2-58p16, WORKING DRA...    44   9.8    1
(AC219337) Bos taurus clone CH240-337J6, WORKING DRAFT SEQUE...    44   9.8    1
(AC173502) Bos taurus clone CH240-315G21, WORKING DRAFT SEQU...    44   9.8    1
(AC167372) Bos taurus clone CH240-120K19, WORKING DRAFT SEQU...    44   9.8    1
(AC163267) Rhinolophus ferrumequinum clone VMRC7-94P15, WORK...    44   9.8    1

>(AU284851) Dictyostelium discoideum gamete cDNA clone:FC-BN08, 5'
           end single read.
          Length = 565

 Score =  912 bits (460), Expect(2) = 0.0
 Identities = 460/460 (100%)
 Strand = Plus / Plus


Query: 1   aatggatataaaaataaataattgttcaccagttaaatattttgatggtaattcaatgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aatggatataaaaataaataattgttcaccagttaaatattttgatggtaattcaatgag 60


Query: 61  gtgtatttggtggccaattggatactcgttaggtgatgaaaaatcaaattcatgtgtaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtgtatttggtggccaattggatactcgttaggtgatgaaaaatcaaattcatgtgtaaa 120


Query: 121 atgtaatagggaaattgtaacttggcaatatgggcaatggtggtcatgaaaatgattatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgtaatagggaaattgtaacttggcaatatgggcaatggtggtcatgaaaatgattatt 180


Query: 181 atatggttgataatagtcctttaaaagtttattcatgtgctaatgatatgtgtaatggga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atatggttgataatagtcctttaaaagtttattcatgtgctaatgatatgtgtaatggga 240


Query: 241 ataacacatgtattggtgataataatattggtgatttatgttactattgtacaaattatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ataacacatgtattggtgataataatattggtgatttatgttactattgtacaaattatc 300


Query: 301 atgaaagtacttcaatacaagcttcaaagaatggtattcaatgttgttcaaatttcaatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgaaagtacttcaatacaagcttcaaagaatggtattcaatgttgttcaaatttcaatt 360


Query: 361 tttaacttgaatgaaaatttttcttttcatatagaattagtattttaccattatttagaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttaacttgaatgaaaatttttcttttcatatagaattagtattttaccattatttagaa 420


Query: 421 tttccattgatttctttgatggttattgttattttagggg 460
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttccattgatttctttgatggttattgttattttagggg 460

 Score = 73.8 bits (37), Expect(2) = 0.0
 Identities = 37/37 (100%)
 Strand = Plus / Plus


Query: 529 cagatttaacaatatggttgttaaataaatttttaaa 565
           |||||||||||||||||||||||||||||||||||||
Sbjct: 529 cagatttaacaatatggttgttaaataaatttttaaa 565

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,266,055,345
Number of extensions: 91561074
Number of successful extensions: 8806840
Number of sequences better than 10.0: 595
Length of query: 983
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 959
Effective length of database: 96,409,374,237
Effective search space: 92456589893283
Effective search space used: 92456589893283
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.20
Homology vs Protein 
Query= Contig-U16017-1 (Contig-U16017-1Q) /CSM_Contig/Contig-U16017-1Q.Seq.d
         (983 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC117072_62(AC117072|pid:none) Dictyostelium discoideum chromoso...    47   8e-04
AC116920_3(AC116920|pid:none) Dictyostelium discoideum chromosom...    47   0.001
AY150271_22(AY150271|pid:none) Enterobacteria phage epsilon15, c...    37   0.80
(P15402) RecName: Full=RNA replication protein; AltName: Full=14...    34   6.7

>AC117072_62(AC117072|pid:none) Dictyostelium discoideum chromosome 2
            map 3879572-4071762 strain AX4, complete sequence.
          Length = 1048

 Score = 47.4 bits (111), Expect = 8e-04
 Identities = 37/144 (25%), Positives = 50/144 (34%), Gaps = 40/144 (27%)
 Frame = +3

Query: 168  ENDYYMVDN-SPLKVYSCANDMCNGNNTCIGDNNIGDLCYYCTNYHESTSIQASKNGIQC 344
            +N Y ++DN + +  Y C   MC    +CI   N G LC  C + +       SKNG  C
Sbjct: 804  DNYYLLIDNKTAIGTYQCPVGMCGNYGSCIATQNTGLLCLECVDGN-------SKNGFYC 856

Query: 345  CSNXXXXXXXXXXXSY--------------RISI-------------------------L 407
            CS+                           R+SI                         +
Sbjct: 857  CSSSSPWLIIVYIIFIILFGLSFSLIKYCDRLSISIFKSTIVFFQINSMIFYAYPGLYFI 916

Query: 408  PLFRISIDFFDGYCYFRGLNYLHK 479
             LFR SIDF    C F   NY++K
Sbjct: 917  QLFRFSIDFISNICIFNKFNYIYK 940

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,200,186,809
Number of extensions: 20586343
Number of successful extensions: 48452
Number of sequences better than 10.0: 4
Number of HSP's gapped: 48372
Number of HSP's successfully gapped: 4
Length of query: 327
Length of database: 1,051,180,864
Length adjustment: 129
Effective length of query: 198
Effective length of database: 633,664,753
Effective search space: 125465621094
Effective search space used: 125465621094
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.79  gvh: 0.52  alm: 0.16  top: 0.43  tms: 0.27  mit: 0.40  mip: 0.04
 nuc: 0.40  erl: 0.00  erm: 0.80  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 1.00  m3b: 0.00  m_ : 0.00 

	 44.0 %: plasma membrane
	 32.0 %: endoplasmic reticulum
	 12.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: cytoplasmic
	  4.0 %: peroxisomal

>> prediction for Contig-U16017-1 is pla
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 0