| Contig-U16008-1 |
| Contig ID |
Contig-U16008-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1557 |
| Chromosome number (1..6, M) |
5 |
| Chromosome length |
5062330 |
| Start point |
1711154 |
| End point |
1712676 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
5 |
| Number of EST |
8 |
| Link to clone list |
U16008 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 3. 8 |
| Homology vs DNA |
Query= Contig-U16008-1 (Contig-U16008-1Q) /CSM_Contig/Contig-U16008-1Q.Seq.d
(1567 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU284636) Dictyostelium discoideum gamete cDNA clone:FC-BF1... 1154 0.0 1
(C93870) Dictyostelium discoideum slug cDNA, clone SSL811. 852 0.0 2
(BJ389811) Dictyostelium discoideum cDNA clone:dds20l06, 5' ... 999 0.0 2
(BJ330230) Dictyostelium discoideum cDNA clone:dda27f20, 5' ... 934 0.0 2
(BJ347671) Dictyostelium discoideum cDNA clone:dda27f20, 3' ... 412 0.0 4
(AU284637) Dictyostelium discoideum gamete cDNA clone:FC-BF1... 426 0.0 3
(AU060350) Dictyostelium discoideum slug cDNA, clone SLJ368. 480 e-131 1
(BJ402013) Dictyostelium discoideum cDNA clone:dds20l06, 3' ... 234 e-104 4
(BJ326632) Dictyostelium discoideum cDNA clone:dda17h08, 5' ... 228 4e-73 2
(AU053670) Dictyostelium discoideum slug cDNA, clone SLJ368. 283 1e-71 1
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 34 0.003 13
(AE014829) Plasmodium falciparum 3D7 chromosome 10 section 1... 44 0.031 14
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 34 0.046 13
(AC200989) Strongylocentrotus purpuratus clone R3-12B6, WORK... 50 0.25 1
(AC180772) Strongylocentrotus purpuratus clone R3-3073N24, W... 50 0.25 1
(AC178115) Strongylocentrotus purpuratus clone R3-3073N20, W... 50 0.25 1
(CD314072) StrPu621.004436 Sea urchin unfertilised egg cDNA ... 50 0.25 1
(BZ478648) BONRO43TR BO_1.6_2_KB_tot Brassica oleracea genom... 38 0.37 2
(AC226500) Homo sapiens chromosome UNKNOWN clone ABC9-439066... 46 0.54 3
(AC166589) Bos taurus clone CH240-175I15, WORKING DRAFT SEQU... 38 0.54 2
(CU639412) Zebrafish DNA sequence from clone CH73-268G8 in l... 36 0.59 2
(AX346908) Sequence 1979 from Patent WO0200928. 40 0.59 5
(CR382398) Plasmodium falciparum chromosome 6, complete sequ... 36 0.64 14
(EJ423379) 1093012246468 Global-Ocean-Sampling_GS-28-01-01-1... 36 0.72 2
(CT826383) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.78 8
(CU104691) S.lycopersicum DNA sequence from clone LE_HBa-8H2... 48 1.0 1
(AP008211) Oryza sativa (japonica cultivar-group) genomic DN... 48 1.0 1
(AC121365) Oryza sativa Japonica Group chromosome 5 clone OS... 48 1.0 1
(AC097111) Oryza sativa Japonica Group chromosome 5 clone OJ... 48 1.0 1
(EA701741) Sequence 80620 from patent US 7365185. 48 1.0 1
(AC102962) Rattus norvegicus clone CH230-170B17, *** SEQUENC... 48 1.0 1
(AC094838) Rattus norvegicus clone CH230-5N12, *** SEQUENCIN... 48 1.0 1
(AC209987) Zea mays chromosome 5 clone CH201-458L12; ZMMBBc0... 48 1.0 1
(AC204513) Zea mays chromosome 6 clone CH201-451A18; ZMMBBc0... 48 1.0 1
(AC177320) Strongylocentrotus purpuratus clone R3-46F7, WORK... 48 1.0 1
(AC176837) Strongylocentrotus purpuratus clone R3-3120B11, W... 48 1.0 1
(EK289113) 1095462324018 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.0 1
(DU923507) 344878 Tomato EcoRI BAC Library Solanum lycopersi... 48 1.0 1
(DH833522) Rattus norvegicus DNA, BAC clone: RNB1-441P24, 5'... 48 1.0 1
(CZ934883) 253990 Tomato EcoRI BAC Library Solanum lycopersi... 48 1.0 1
(CW462511) fsbb001f210l04k0 Sorghum methylation filtered lib... 48 1.0 1
(CW462292) fsbb001f210g01f0 Sorghum methylation filtered lib... 48 1.0 1
(CW408250) fsbb001f102b02k0 Sorghum methylation filtered lib... 48 1.0 1
(CW264124) 104_732_11231105_148_35235_067 Sorghum methylatio... 48 1.0 1
(CW158226) 104_561_11147942_116_36394_049 Sorghum methylatio... 48 1.0 1
(CW145857) 104_538_11138685_148_34982_087 Sorghum methylatio... 48 1.0 1
(CW095110) 104_460_11001106_116_34327_047 Sorghum methylatio... 48 1.0 1
(CL150092) 104_331_10778275_116_31356_211 Sorghum methylatio... 48 1.0 1
(DW847138) MSAM300687_1392_3070 LCM-dissected maize shoot ap... 48 1.0 1
(CT822815) Paramecium tetraurelia 5-PRIME EST from clone LK0... 48 1.0 1
(CT803125) Paramecium tetraurelia 5-PRIME EST from clone LK0... 48 1.0 1
(CZ543691) SRAA-aad51d12.b1 Strongyloides ratti whole genome... 36 1.4 2
(DU893207) 404569 Tomato HindIII BAC Library Solanum lycoper... 46 1.4 2
(AE014819) Plasmodium falciparum 3D7 chromosome 14 section 4... 34 1.5 11
(AX344565) Sequence 16 from Patent WO0200932. 34 1.9 7
(AC125219) Mus musculus BAC clone RP23-67O7 from 1, complete... 36 2.0 2
(AC123922) Mus musculus BAC clone RP24-198D1 from chromosome... 36 2.0 2
(AC115683) Dictyostelium discoideum chromosome 2 map complem... 38 2.1 6
(AX344566) Sequence 17 from Patent WO0200932. 42 2.1 11
(AC124088) Mus musculus clone RP24-428J8, LOW-PASS SEQUENCE ... 36 2.1 2
(AL844506) Plasmodium falciparum chromosome 7. 34 2.3 14
(AC202346) Medicago truncatula clone mth2-2n5, WORKING DRAFT... 34 2.3 8
(X70810) Euglena gracilis chloroplast complete genome. 38 2.6 7
(FH142398) CHO_OF3718xa23r1.ab1 CHO_OF3 Nicotiana tabacum ge... 34 2.7 2
(AJ294725) Astasia longa complete chloroplast genome. 34 3.0 8
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 36 3.1 9
(FI238643) CccaBb014-E8JF CccABb Cajanus cajan genomic clone... 40 3.7 3
(BH132679) ENTNG32TF Entamoeba histolytica Sheared DNA Entam... 32 3.9 3
(AC185357) Populus trichocarpa clone Pop1-29F24, complete se... 38 4.0 5
(CR381594) Zebrafish DNA sequence from clone DKEY-12H3 in li... 46 4.0 1
(AL772304) Mouse DNA sequence from clone RP23-401E12 on chro... 46 4.0 1
(AC162301) Mus musculus chromosome 15, clone RP24-282H6, com... 46 4.0 1
(AC195631) Pan troglodytes BAC clone CH251-682P9 from chromo... 46 4.0 1
(AP008214) Oryza sativa (japonica cultivar-group) genomic DN... 46 4.0 1
(AP004183) Oryza sativa Japonica Group genomic DNA, chromoso... 46 4.0 1
(AF123748) Astrodaucus orientalis ribosomal protein S16 (rps... 46 4.0 1
(AC216455) Populus trichocarpa clone POP032-C02, complete se... 46 4.0 1
(AC024609) Arabidopsis thaliana chromosome I BAC F14P1 genom... 46 4.0 1
(AC007797) Arabidopsis thaliana chromosome I BAC F6F9 genomi... 46 4.0 1
(EA696635) Sequence 75514 from patent US 7365185. 46 4.0 1
(AC015528) Homo sapiens chromosome 8, clone RP11-179A23, com... 46 4.0 1
(AC010404) Homo sapiens chromosome 4 clone CTD-2149O24, comp... 46 4.0 1
(AC109373) Rattus norvegicus clone CH230-252B20, *** SEQUENC... 46 4.0 1
(AC102974) Rattus norvegicus clone CH230-75I13, WORKING DRAF... 46 4.0 1
(AC099371) Rattus norvegicus clone CH230-191A13, WORKING DRA... 46 4.0 1
(AC096820) Rattus norvegicus clone CH230-128H24, *** SEQUENC... 46 4.0 1
(CU929600) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 4.0 1
(AC079516) Mus musculus clone RP23-298O16, WORKING DRAFT SEQ... 46 4.0 1
(AC213827) Zea mays chromosome 4 clone CH201-166J7; ZMMBBc01... 46 4.0 1
(AC206325) Zea mays chromosome 4 clone CH201-452F11; ZMMBBc0... 46 4.0 1
(AC164850) Bos taurus clone CH240-151O21, *** SEQUENCING IN ... 46 4.0 1
(AQ880509) HS_5044_A2_H09_T7 RPCI-11 Human Male BAC Library ... 46 4.0 1
(EI462481) PV_GBa0066I22.f PV_GBa Phaseolus vulgaris genomic... 46 4.0 1
(EI462435) PV_GBa0066H22.f PV_GBa Phaseolus vulgaris genomic... 46 4.0 1
(CT197827) Sus scrofa genomic clone CH242-195J24, genomic su... 46 4.0 1
(CG173626) PUKAH05TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 46 4.0 1
(CG173623) PUKAH05TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 46 4.0 1
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 46 4.0 1
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 46 4.0 1
(AC173907) Microcebus murinus clone CH257-213E6, WORKING DRA... 40 4.0 7
(AC117073) Dictyostelium discoideum chromosome 2 map 6045872... 40 4.1 3
(AE014830) Plasmodium falciparum 3D7 chromosome 10 section 2... 34 4.5 12
(AE014836) Plasmodium falciparum 3D7 chromosome 11 section 1... 34 4.6 12
(FH896030) CHO_ONF043xn05f1.ab1 CHO_ONF Nicotiana tabacum ge... 40 4.7 2
(CR339333) mte1-70K24FM1 BAC end, cultivar Jemalong A17 of M... 44 4.7 2
(AE014845) Plasmodium falciparum 3D7 chromosome 12, section ... 36 4.7 13
(AE016826) Buchnera aphidicola str. Bp (Baizongia pistaciae)... 32 4.8 17
(DY789821) Sf1M06722-3-1 Spodoptera frugiperda Midgut cDNA L... 36 4.8 3
(EU004203) Saccharomyces cerevisiae YJM789 mitochondrion, co... 34 4.9 6
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7... 38 5.0 12
(DY787014) Sf1M00815-3-1 Spodoptera frugiperda Midgut cDNA L... 36 5.1 3
(CS374451) Sequence 554 from Patent WO2006034879. 36 5.1 4
(CS374179) Sequence 282 from Patent WO2006034879. 36 5.1 4
(AL844507) Plasmodium falciparum chromosome 8. 36 5.2 14
(EK091525) 1092962004898 Global-Ocean-Sampling_GS-31-01-01-1... 38 5.3 2
(AC189459) Brassica rapa subsp. pekinensis clone KBrB073K15,... 34 5.6 7
(EK104105) 1092963036753 Global-Ocean-Sampling_GS-31-01-01-1... 38 6.3 2
(BD429000) Method and nucleic acids for pharmacogenomic meth... 38 6.5 3
(AX348479) Sequence 174 from Patent WO0202806. 38 6.5 3
(AX346805) Sequence 1876 from Patent WO0200928. 38 6.5 3
(AC232577) Brassica rapa subsp. pekinensis clone KBrS012H21,... 40 7.0 6
(FB571360) Sequence 227 from Patent EP1865317. 40 7.3 8
(AC144431) Medicago truncatula clone mth2-21i14, complete se... 32 7.4 2
(AC202148) Zea mays chromosome 2 clone ZMMBBb-358N4; ZMMBBb0... 34 7.4 2
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 40 7.5 14
(AM482739) Vitis vinifera contig VV78X028325.12, whole genom... 34 7.8 4
(AX344555) Sequence 6 from Patent WO0200932. 36 8.0 12
(BY550884) Mus musculus B6-derived CD11 +ve dendritic cells ... 34 9.1 2
(CL921709) OA_ABa0026I12.r OA_ABa Oryza australiensis genomi... 32 9.4 3
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 32 9.4 9
(CC983345) ZUAC843TV ZM_3.0_4.0_KB Zea mays genomic clone ZM... 34 9.9 2
(CZ767703) OC__Ba0123L14.f OC__Ba Oryza coarctata genomic cl... 32 9.9 2
>(AU284636) Dictyostelium discoideum gamete cDNA clone:FC-BF19, 5'
end single read.
Length = 658
Score = 1154 bits (582), Expect = 0.0
Identities = 594/598 (99%)
Strand = Plus / Plus
Query: 89 attggtgtgtaaatatgacaaataatagtggtaattccattaaaacaagacctaaaaata 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attggtgtgtaaatatgacaaataatagtggtaattccattaaaacaagacctaaaaata 120
Query: 149 tagatggtgatgcagaagattcaacacgttcagaaaagaaaccagttgtttatgttgaag 208
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 121 tagatggtgatgcagaagattcaacacgttcagaaaagaaaccagttgtttatgattgag 180
Query: 209 atccaccaaccccaccaagatggctttcttatgaattcatattttattatataataattg 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atccaccaaccccaccaagatggctttcttatgaattcatattttattatataataattg 240
Query: 269 ttattggttatattgttgtacttaaaatgttattaacaagatcaaatgaatataatgatg 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttattggttatattgttgtacttaaaatgttattaacaagatcaaatgaatataatgatg 300
Query: 329 gattaaaagaaaataaaggtattgttgaaggttggcttttaggtagaaaacaagatttat 388
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 301 gattaaaagaaaataaaggtattgttgaaggttggtttttaggtagaaaacaagatttat 360
Query: 389 cagatacacaatataagatatatagacaaaatttcccattactttcaattggtttatcaa 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagatacacaatataagatatatagacaaaatttcccattactttcaattggtttatcaa 420
Query: 449 ttttcttattcgttagtgcttctattcgtaaaaactttccagataaaccatttgttagaa 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttttcttattcgttagtgcttctattcgtaaaaactttccagataaaccatttgttagaa 480
Query: 509 ttttattttataatattatatcattaggatttttaatatttgtacatggatcatcaacaa 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttttattttataatattatatcattaggatttttaatatttgtacatggatcatcaacaa 540
Query: 569 ttattgtattaggtattgcaattattaattttagtattagtagaatttttgaaagatcaa 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttattgtattaggtattgcaattattaattttagtattagtagaatttttgaaagatcaa 600
Query: 629 agatgttaccagcagttacatggattttcaatttaattatattatggacatgttacat 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agatgttaccagcagttacatggattttcaatttaattatattatggacatgttacat 658
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,703,365,164
Number of extensions: 106979665
Number of successful extensions: 9010067
Number of sequences better than 10.0: 133
Length of query: 1567
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1543
Effective length of database: 96,409,374,237
Effective search space: 148759664447691
Effective search space used: 148759664447691
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.20 |
| Homology vs Protein |
Query= Contig-U16008-1 (Contig-U16008-1Q) /CSM_Contig/Contig-U16008-1Q.Seq.d
(1567 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC079733_8(AC079733|pid:none) Arabidopsis thaliana chromosome 1 ... 135 2e-32
CR380954_130(CR380954|pid:none) Candida glabrata strain CBS138 c... 88 1e-29
(Q08929) RecName: Full=Glycerol uptake protein 2; &S65208(S6520... 88 6e-23
AY074538_1(AY074538|pid:none) Arabidopsis thaliana unknown prote... 91 4e-19
EU961137_1(EU961137|pid:none) Zea mays clone 232885 GUP1 mRNA, c... 92 1e-18
(Q09758) RecName: Full=Putative membrane-bound O-acyltransferase... 84 9e-18
AL590562_1(AL590562|pid:none) S.pombe chromosome I BAC pB21F2. 84 9e-18
(P53154) RecName: Full=Glycerol uptake protein 1; &S64091(S6409... 91 9e-17
AY144836_1(AY144836|pid:none) Saccharomyces bayanus clone Contig... 91 9e-17
AE017346_123(AE017346|pid:none) Cryptococcus neoformans var. neo... 90 3e-16
AY145006_1(AY145006|pid:none) Saccharomyces kluyveri clone Conti... 89 6e-16
AE016819_167(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 87 1e-15
FN392319_367(FN392319|pid:none) Pichia pastoris GS115 chromosome... 86 3e-15
CT005258_144(CT005258|pid:none) Leishmania major strain Friedlin... 79 6e-15
CT005258_143(CT005258|pid:none) Leishmania major strain Friedlin... 83 2e-14
AM502237_123(AM502237|pid:none) Leishmania infantum chromosome 19. 82 7e-14
AM502253_226(AM502253|pid:none) Leishmania infantum chromosome 35. 82 7e-14
AM502237_124(AM502237|pid:none) Leishmania infantum chromosome 19. 82 7e-14
CR382131_1238(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 81 1e-13
CT005258_139(CT005258|pid:none) Leishmania major strain Friedlin... 81 1e-13
CT005258_140(CT005258|pid:none) Leishmania major strain Friedlin... 81 1e-13
CR382136_223(CR382136|pid:none) Debaryomyces hansenii strain CBS... 80 2e-13
FM992688_1237(FM992688|pid:none) Candida dubliniensis CD36 chrom... 80 2e-13
AY338363_1(AY338363|pid:none) Pichia farinosa Gup1p (GUP1) gene,... 80 2e-13
CT005258_141(CT005258|pid:none) Leishmania major strain Friedlin... 79 5e-13
AM270235_10(AM270235|pid:none) Aspergillus niger contig An11c018... 78 8e-13
AM494956_152(AM494956|pid:none) Leishmania braziliensis chromoso... 75 5e-12
AM494956_159(AM494956|pid:none) Leishmania braziliensis chromoso... 75 5e-12
AM494956_151(AM494956|pid:none) Leishmania braziliensis chromoso... 75 5e-12
AM494956_155(AM494956|pid:none) Leishmania braziliensis chromoso... 74 1e-11
AC104283_6(AC104283|pid:none) Oryza sativa (japonica cultivar-gr... 74 1e-11
S62402(S62402;T38357)major facilitator family protein - fission ... 69 6e-10
AY144835_1(AY144835|pid:none) Saccharomyces bayanus clone Contig... 56 3e-06
CP000777_2798(CP000777|pid:none) Leptospira biflexa serovar Pato... 47 7e-06
CP000140_933(CP000140|pid:none) Parabacteroides distasonis ATCC ... 40 3e-05
AE000520_560(AE000520|pid:none) Treponema pallidum subsp. pallid... 45 3e-05
CP001110_2303(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 43 3e-04
AP007255_1065(AP007255|pid:none) Magnetospirillum magneticum AMB... 46 4e-04
CP000777_1725(CP000777|pid:none) Leptospira biflexa serovar Pato... 37 6e-04
CP000926_4539(CP000926|pid:none) Pseudomonas putida GB-1, comple... 37 7e-04
CT573326_4226(CT573326|pid:none) Pseudomonas entomophila str. L4... 37 7e-04
CP000348_1373(CP000348|pid:none) Leptospira borgpetersenii serov... 40 7e-04
CP000382_662(CP000382|pid:none) Clostridium novyi NT, complete g... 42 0.001
AY279078_1(AY279078|pid:none) Pseudomonas sp. QDA alginate biosy... 37 0.001
AP009384_952(AP009384|pid:none) Azorhizobium caulinodans ORS 571... 46 0.001
CP000283_464(CP000283|pid:none) Rhodopseudomonas palustris BisB5... 44 0.001
AM181176_959(AM181176|pid:none) Pseudomonas fluorescens SBW25 co... 38 0.001
(P59789) RecName: Full=Probable poly(beta-D-mannuronate) O-acety... 38 0.001
(Q88ND2) RecName: Full=Probable poly(beta-D-mannuronate) O-acety... 37 0.001
CP000712_4388(CP000712|pid:none) Pseudomonas putida F1, complete... 37 0.001
CP001056_2931(CP001056|pid:none) Clostridium botulinum B str. Ek... 40 0.001
AE017226_1324(AE017226|pid:none) Treponema denticola ATCC 35405,... 45 0.002
CP001096_265(CP001096|pid:none) Rhodopseudomonas palustris TIE-1... 43 0.002
BX572603_37(BX572603|pid:none) Rhodopseudomonas palustris CGA009... 43 0.002
AM260522_1103(AM260522|pid:none) Helicobacter acinonychis str. S... 38 0.003
CP000943_4380(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 39 0.003
CP001087_2948(CP001087|pid:none) Desulfobacterium autotrophicum ... 43 0.003
CP000382_446(CP000382|pid:none) Clostridium novyi NT, complete g... 45 0.003
AP009384_3219(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 44 0.003
CP000089_2398(CP000089|pid:none) Dechloromonas aromatica RCB, co... 39 0.003
AL365317_1(AL365317|pid:none) Mouse DNA sequence from clone RP23... 46 0.004
AK172126_1(AK172126|pid:none) Mus musculus activated spleen cDNA... 46 0.004
AP007255_94(AP007255|pid:none) Magnetospirillum magneticum AMB-1... 37 0.004
AM236080_3919(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 41 0.004
AP009384_2811(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 42 0.004
CP000951_2349(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 38 0.006
CP001001_5472(CP001001|pid:none) Methylobacterium radiotolerans ... 35 0.006
CP000728_2955(CP000728|pid:none) Clostridium botulinum F str. La... 40 0.007
CP000673_361(CP000673|pid:none) Clostridium kluyveri DSM 555, co... 42 0.007
AK316190_1(AK316190|pid:none) Homo sapiens cDNA, FLJ79089 comple... 45 0.010
(Q5VTY9) RecName: Full=Protein-cysteine N-palmitoyltransferase H... 45 0.010
AK299200_1(AK299200|pid:none) Homo sapiens cDNA FLJ60828 complet... 45 0.010
AK298991_1(AK298991|pid:none) Homo sapiens cDNA FLJ54986 complet... 45 0.010
CP001581_3253(CP001581|pid:none) Clostridium botulinum A2 str. K... 39 0.010
CP000939_3055(CP000939|pid:none) Clostridium botulinum B1 str. O... 39 0.010
CP001083_3182(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 39 0.010
CP000828_2107(CP000828|pid:none) Acaryochloris marina MBIC11017,... 42 0.010
CP000361_1763(CP000361|pid:none) Arcobacter butzleri RM4018, com... 39 0.010
CP000348_1249(CP000348|pid:none) Leptospira borgpetersenii serov... 43 0.010
CP000350_1647(CP000350|pid:none) Leptospira borgpetersenii serov... 43 0.010
CP000094_951(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, c... 37 0.012
CP000139_225(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, ... 40 0.012
CP001357_2469(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 37 0.012
CU466930_1500(CU466930|pid:none) Candidatus Cloacamonas acidamin... 40 0.012
CP001283_889(CP001283|pid:none) Bacillus cereus AH820, complete ... 42 0.013
CP000485_755(CP000485|pid:none) Bacillus thuringiensis str. Al H... 42 0.013
CP000001_777(CP000001|pid:none) Bacillus cereus E33L, complete g... 42 0.013
CP000853_816(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, ... 44 0.013
CP000249_3866(CP000249|pid:none) Frankia sp. CcI3, complete geno... 40 0.016
CT573213_6072(CT573213|pid:none) Frankia alni str. ACN14A chromo... 40 0.016
CP000438_1462(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 37 0.016
CP000744_1585(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 37 0.016
FM209186_1486(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 37 0.016
CP001615_1052(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 38 0.016
CP000781_1630(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 43 0.016
CP000227_877(CP000227|pid:none) Bacillus cereus Q1, complete gen... 42 0.016
CP001177_914(CP001177|pid:none) Bacillus cereus AH187, complete ... 42 0.016
AK092186_1(AK092186|pid:none) Homo sapiens cDNA FLJ34867 fis, cl... 44 0.016
CP000058_1065(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 37 0.021
AP010904_3824(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 41 0.021
BX572601_121(BX572601|pid:none) Rhodopseudomonas palustris CGA00... 40 0.021
CP000487_1659(CP000487|pid:none) Campylobacter fetus subsp. fetu... 37 0.021
AM398681_1370(AM398681|pid:none) Flavobacterium psychrophilum JI... 42 0.021
CP000943_578(CP000943|pid:none) Methylobacterium sp. 4-46, compl... 35 0.021
AE017285_1142(AE017285|pid:none) Desulfovibrio vulgaris subsp. v... 39 0.021
CP000781_4203(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 38 0.027
AP010904_3920(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 39 0.027
CR626927_3853(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 39 0.027
CP000903_5101(CP000903|pid:none) Bacillus weihenstephanensis KBA... 39 0.035
AM746676_8422(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 40 0.035
CP001032_3027(CP001032|pid:none) Opitutus terrae PB90-1, complet... 39 0.035
AE017194_970(AE017194|pid:none) Bacillus cereus ATCC 10987, comp... 40 0.035
AF343914_3(AF343914|pid:none) Campylobacter jejuni NCTC 11828 LO... 41 0.045
CP000675_2288(CP000675|pid:none) Legionella pneumophila str. Cor... 39 0.045
AE017354_2161(AE017354|pid:none) Legionella pneumophila subsp. p... 39 0.045
AM180355_2616(AM180355|pid:none) Clostridium difficile 630 compl... 39 0.045
CR628337_2139(CR628337|pid:none) Legionella pneumophila str. Len... 39 0.045
CP000494_5281(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 36 0.058
AE017194_5529(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 38 0.058
CP000393_472(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 39 0.058
CP000777_2258(CP000777|pid:none) Leptospira biflexa serovar Pato... 40 0.058
CP000764_686(CP000764|pid:none) Bacillus cereus subsp. cytotoxis... 38 0.058
CP001022_803(CP001022|pid:none) Exiguobacterium sibiricum 255-15... 39 0.058
CP001349_4415(CP001349|pid:none) Methylobacterium nodulans ORS 2... 36 0.058
CP001029_3190(CP001029|pid:none) Methylobacterium populi BJ001, ... 32 0.058
CP000908_2998(CP000908|pid:none) Methylobacterium extorquens PA1... 32 0.058
AM398681_1368(AM398681|pid:none) Flavobacterium psychrophilum JI... 42 0.062
CP001358_178(CP001358|pid:none) Desulfovibrio desulfuricans subs... 39 0.074
AE010300_2123(AE010300|pid:none) Leptospira interrogans serovar ... 40 0.075
CP001176_5355(CP001176|pid:none) Bacillus cereus B4264, complete... 42 0.081
CP000473_1078(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 42 0.081
CP001037_4960(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 37 0.096
AP009389_1089(AP009389|pid:none) Pelotomaculum thermopropionicum... 36 0.097
CP000685_244(CP000685|pid:none) Flavobacterium johnsoniae UW101,... 41 0.11
CU234118_4882(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 36 0.12
CP000510_1560(CP000510|pid:none) Psychromonas ingrahamii 37, com... 31 0.12
CP000448_113(CP000448|pid:none) Syntrophomonas wolfei subsp. wol... 37 0.12
AE002098_1219(AE002098|pid:none) Neisseria meningitidis MC58, co... 37 0.12
DQ015867_2(DQ015867|pid:none) Neisseria lactamica NG00535-like p... 37 0.12
AL157959_1303(AL157959|pid:none) Neisseria meningitidis serogrou... 37 0.12
CP000885_227(CP000885|pid:none) Clostridium phytofermentans ISDg... 39 0.12
CP001510_3019(CP001510|pid:none) Methylobacterium extorquens AM1... 32 0.13
AE016823_1436(AE016823|pid:none) Leptospira interrogans serovar ... 41 0.14
AM167904_2621(AM167904|pid:none) Bordetella avium 197N complete ... 41 0.14
AE010300_2488(AE010300|pid:none) Leptospira interrogans serovar ... 41 0.14
CP001635_4174(CP001635|pid:none) Variovorax paradoxus S110 chrom... 35 0.16
AE004969_499(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, c... 37 0.16
CP000302_573(CP000302|pid:none) Shewanella denitrificans OS217, ... 36 0.16
AM180255_30(AM180255|pid:none) Lawsonia intracellularis PHE/MN1-... 39 0.16
CP000350_1538(CP000350|pid:none) Leptospira borgpetersenii serov... 40 0.18
CP000675_883(CP000675|pid:none) Legionella pneumophila str. Corb... 40 0.18
AE017354_770(AE017354|pid:none) Legionella pneumophila subsp. pn... 40 0.18
CR628337_831(CR628337|pid:none) Legionella pneumophila str. Lens... 40 0.18
CP000155_4476(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 37 0.21
AE017282_2921(AE017282|pid:none) Methylococcus capsulatus str. B... 36 0.21
AL954747_1055(AL954747|pid:none) Nitrosomonas europaea ATCC 1971... 37 0.21
BA000040_375(BA000040|pid:none) Bradyrhizobium japonicum USDA 11... 36 0.21
AM942759_2644(AM942759|pid:none) Proteus mirabilis strain HI4320... 34 0.21
AP006841_3273(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 35 0.21
CP000781_1737(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 40 0.24
CP000312_1463(CP000312|pid:none) Clostridium perfringens SM101, ... 40 0.24
CP000680_1016(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 40 0.24
CP000348_1524(CP000348|pid:none) Leptospira borgpetersenii serov... 40 0.24
AP008955_2963(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 40 0.24
CP000450_716(CP000450|pid:none) Nitrosomonas eutropha C91, compl... 37 0.27
BX842650_184(BX842650|pid:none) Bdellovibrio bacteriovorus compl... 36 0.27
AL111168_576(AL111168|pid:none) Campylobacter jejuni subsp. jeju... 33 0.27
CP000814_571(CP000814|pid:none) Campylobacter jejuni subsp. jeju... 33 0.27
CP000025_697(CP000025|pid:none) Campylobacter jejuni RM1221, com... 33 0.27
AM180252_478(AM180252|pid:none) Lawsonia intracellularis PHE/MN1... 40 0.31
CP000349_138(CP000349|pid:none) Leptospira borgpetersenii serova... 40 0.31
CP000478_1120(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 38 0.34
CT573326_549(CT573326|pid:none) Pseudomonas entomophila str. L48... 32 0.35
CP000783_294(CP000783|pid:none) Enterobacter sakazakii ATCC BAA-... 32 0.35
CP000768_879(CP000768|pid:none) Campylobacter jejuni subsp. doyl... 33 0.35
CP000777_2910(CP000777|pid:none) Leptospira biflexa serovar Pato... 39 0.40
CP000463_1107(CP000463|pid:none) Rhodopseudomonas palustris BisA... 36 0.44
CP000001_778(CP000001|pid:none) Bacillus cereus E33L, complete g... 33 0.45
CP001344_614(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 37 0.45
CU179680_108(CU179680|pid:none) Mycoplasma agalactiae PG2 chromo... 39 0.53
DQ832182_10(DQ832182|pid:none) Spirochaeta aurantia LGLA biosynt... 39 0.53
AE017282_590(AE017282|pid:none) Methylococcus capsulatus str. Ba... 35 0.57
CP000471_387(CP000471|pid:none) Magnetococcus sp. MC-1, complete... 35 0.57
CP000764_687(CP000764|pid:none) Bacillus cereus subsp. cytotoxis... 33 0.57
CP000227_878(CP000227|pid:none) Bacillus cereus Q1, complete gen... 33 0.57
CP001177_915(CP001177|pid:none) Bacillus cereus AH187, complete ... 33 0.57
AE017194_971(AE017194|pid:none) Bacillus cereus ATCC 10987, comp... 33 0.57
CP000383_2449(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 37 0.58
CP000349_136(CP000349|pid:none) Leptospira borgpetersenii serova... 36 0.58
CP000348_1933(CP000348|pid:none) Leptospira borgpetersenii serov... 39 0.69
CP000350_1897(CP000350|pid:none) Leptospira borgpetersenii serov... 39 0.69
AE010300_2255(AE010300|pid:none) Leptospira interrogans serovar ... 33 0.74
CP000117_1643(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 36 0.74
CP000155_3954(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 34 0.74
AP009389_1214(AP009389|pid:none) Pelotomaculum thermopropionicum... 38 0.90
AE016823_2298(AE016823|pid:none) Leptospira interrogans serovar ... 38 0.90
CP000076_5787(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 32 0.96
AE016824_162(AE016824|pid:none) Leptospira interrogans serovar C... 38 1.2
CP000777_961(CP000777|pid:none) Leptospira biflexa serovar Patoc... 38 1.2
CP000778_243(CP000778|pid:none) Leptospira biflexa serovar Patoc... 38 1.2
AE014134_2877(AE014134|pid:none) Drosophila melanogaster chromos... 38 1.2
AE014134_2878(AE014134|pid:none) Drosophila melanogaster chromos... 38 1.2
AF468649_1(AF468649|pid:none) Drosophila melanogaster clone 12 a... 38 1.2
CP000885_3393(CP000885|pid:none) Clostridium phytofermentans ISD... 37 1.5
CP000777_513(CP000777|pid:none) Leptospira biflexa serovar Patoc... 37 2.0
AY859489_1(AY859489|pid:none) Lotus japonicus diacylglycerol acy... 37 2.0
CP000449_111(CP000449|pid:none) Maricaulis maris MCS10, complete... 33 2.0
AE008692_446(AE008692|pid:none) Zymomonas mobilis subsp. mobilis... 31 2.0
AY366496_1(AY366496|pid:none) Ricinus communis diacylglycerol ac... 37 2.6
EF653277_1(EF653277|pid:none) Vernonia galamensis type 1 diaclyg... 37 2.6
DQ356679_1(DQ356679|pid:none) Vernicia fordii type 1 diacylglyce... 37 2.6
CP000774_3055(CP000774|pid:none) Parvibaculum lavamentivorans DS... 37 2.6
AE016853_1006(AE016853|pid:none) Pseudomonas syringae pv. tomato... 36 3.4
AE017125_1758(AE017125|pid:none) Helicobacter hepaticus ATCC 514... 36 3.4
EU016658_20(EU016658|pid:none) Uncultured marine microorganism H... 28 4.4
AE010300_1202(AE010300|pid:none) Leptospira interrogans serovar ... 33 4.4
AE016823_2420(AE016823|pid:none) Leptospira interrogans serovar ... 33 4.4
AY858584_1(AY858584|pid:none) Oryza sativa (japonica cultivar-gr... 36 4.5
CP000348_808(CP000348|pid:none) Leptospira borgpetersenii serova... 33 5.6
CP000806_4047(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 33 5.6
CR954201_401(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 35 5.8
AM433916_3(AM433916|pid:none) Vitis vinifera contig VV78X101351.... 35 5.8
BC118146_1(BC118146|pid:none) Bos taurus diacylglycerol O-acyltr... 35 5.8
CP000267_2455(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 35 5.8
CP001072_308(CP001072|pid:none) Helicobacter pylori Shi470, comp... 35 5.8
(Q8MK44) RecName: Full=Diacylglycerol O-acyltransferase 1; ... 35 5.8
AJ318490_1(AJ318490|pid:none) Bos taurus dgat gene for Acyl-CoA:... 35 5.8
BC006263_1(BC006263|pid:none) Homo sapiens diacylglycerol O-acyl... 35 7.6
FM179380_36(FM179380|pid:none) Vitis vinifera complete mitochond... 35 7.6
CS340699_1(CS340699|pid:none) Sequence 1 from Patent WO2006067071. 35 7.6
CP000473_7277(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 35 7.6
(P05718) RecName: Full=Cytochrome b; AltName: Full=Ubiquinol-cyt... 35 7.6
AE017342_80(AE017342|pid:none) Cryptococcus neoformans var. neof... 35 7.6
(O75907) RecName: Full=Diacylglycerol O-acyltransferase 1; ... 35 7.6
AB282595_1(AB282595|pid:none) Eukaryotic synthetic construct pla... 35 7.6
CP000675_1064(CP000675|pid:none) Legionella pneumophila str. Cor... 35 9.9
AB062759_1(AB062759|pid:none) Rattus norvegicus DGAT mRNA for di... 35 9.9
EF653276_1(EF653276|pid:none) Vernonia galamensis type 1 diaclyg... 35 9.9
>AC079733_8(AC079733|pid:none) Arabidopsis thaliana chromosome 1 BAC
T8L23 genomic sequence, complete sequence.
&B96610(B96610)
Length = 395
Score = 135 bits (341), Expect(2) = 2e-32
Identities = 73/245 (29%), Positives = 130/245 (53%), Gaps = 8/245 (3%)
Frame = +1
Query: 346 GIVEGWLL-GRKQDLSDTQYKIYRQNFPLLSIGLSIFLFVSASIRKNFPDKPFVRILFYN 522
G+ GWL+ R+ D+SD Q++ +R N P+LS ++F ++ +R F + + +
Sbjct: 47 GLASGWLIPNRRNDVSDAQWRNFRGNLPILSFVFAVFTVIANGVRSFFHLRAKGMAILWL 106
Query: 523 IISLGFLIFVHGSSTIIVLGIAIINFSISRIFERSKMLP-------AVTWIFNLIILWTC 681
+SL +LI++HG+ I +L IA NF + ++ L V W+F+ +++
Sbjct: 107 SMSLIYLIYLHGACVIYILSIATANFLLVKLDMPQNTLSFKDVAWYGVRWLFSFLLI--- 163
Query: 682 YXXXXXXXXXXXXXXXSTIGYSRHTIGGMYGGHSPGPRLHLTGYLGIEPMNGKFLNIGRT 861
Y+ I G++ SP + + GY + M KFL + R
Sbjct: 164 ------------ELMTHLFYYNAFVISGLWRELSP-VEIFIVGYGVLNFMWLKFLLLWRY 210
Query: 862 FRLFALFDGLDTPGNLTRGVNNNYTFTGFWRSWHGAFNKWTIRYLYIPLGGKKTQSVSIW 1041
FR ++L +G++T N+ +NN Y+ FW++WH +FN+W IRY+YIPLGG + + +++W
Sbjct: 211 FRFWSLVNGIETVENMPNCINNCYSLELFWKTWHASFNRWLIRYMYIPLGGSRRKFLNVW 270
Query: 1042 IIFFF 1056
++F F
Sbjct: 271 VVFTF 275
Score = 28.9 bits (63), Expect(2) = 2e-32
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +2
Query: 1049 FSSIGLWHALWLSWIAWAPLNGVSSPMEMWYQV*FLTPKRFPPRRKWYWRFMVAIAGTFN 1228
F+ + +WH L ++WA L + EM + K ++ R + A++G
Sbjct: 273 FTFVAMWHDLEWKLLSWAWLTCLFFMPEMLLKSASSAYKVESAFGEFLLRELKALSGAVT 332
Query: 1229 IFLLMVANLA 1258
I LM+ANLA
Sbjct: 333 ITCLMIANLA 342
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,594,761,434
Number of extensions: 59637710
Number of successful extensions: 156262
Number of sequences better than 10.0: 238
Number of HSP's gapped: 156137
Number of HSP's successfully gapped: 411
Length of query: 522
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 389
Effective length of database: 620,718,517
Effective search space: 241459503113
Effective search space used: 241459503113
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
1 |
| SL (DIR, L) |
1 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
1 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
1 |
| FC-IC (SUB) |
0 |