Contig-U15993-1
Contig ID Contig-U15993-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15993-1 (Contig-U15993-1Q) /CSM_Contig/Contig-U15993-1Q.Seq.d
TTTAACAACTATTTTAAAACAAGGTTTTAAGTTTAGCAATTCACAATCAA
ATCAAATTATTAGATCATATTCAAAAGGTTTACTATTGGGTCAAAATGGT
TTCGATTTTAATAATAGAAATAAACAAATTATTTCGTTTTCATCATTAAA
TAATTGTAAAAATATTAAAGGTTTATCATTTTTTAGAATAACAAGACAAT
TTTCATCATCAAATACACCAACCAAAAATAATAATAATAATAATAATAAT
AATGATAACGATAATAATAATGACAATAATAATAATGAAAATAAAAACGA
AAATGAGGGTGAGGGTGAAAAAGATGAAAATAAACTTGAGGAAGTTGAAA
TTTCATCAGAGGAAGCTTCATCATTAAGAAATAAAAGAAAAGATAAACTT
GCAGGTATGTTTAATAAACCTAAAGAACCTGTAAAAAAAGAAGAGGAGGC
AGCAGCAGCAACAGCAGCATCAGAACAAGA----------AGTTAAAGAG
GAGCAAGCTAAAAGTAATGATGTCATTATTGANCCACAAGTTTTTACAGA
TGGTAAAGGTGAAAAGGTTGTTATTGAAGGTGATCTTTCAACCTTTTACA
TCTACACTATTTTCTCTGCATTATTTGTTGGTACCATTGGTATTGCAATT
GCAAAATTAATTTCAGATTGGAGAAATAGTGCAACTGGTGTACTTGGTAT
TCAACAATTTGATTTCGTTTTATTGATTCAAGATATTTATTTTGGTGATT
TAAAACCTGCAATGGAAGTTGGTAATAAAGAATTCAATGAAAAAACTAAA
AAGAATTACTTTTTTGATGAAGCTAATATTAAACATGCAACACTTGGTGA
TACAATTACATTAATTATTCCAATTTTACAAAAGAAAACAAATGCAAGAT
TAGGACATGTAAATGTTGATTTTTGCAAAGAAGGTAATGAAATGACCATT
CAAAATTTCTATATCAATGCAATCAATGGTTATGTTTATGACCTTCCAGC
ACCAAAACATAAGATTGACACAACAAAAGAAAGATACAGTGGTAAATATT
CATTAGAAGAATTATTGGCTGATCCAACACTTTAAAATTATAATAATAAA
GAAATAAAAAAATAAAAAAATAAAAAAAAAATAAAAAAATAAAAAAATAA
AAAAATAA

Gap gap included
Contig length 1148
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 6954549
End point 6955696
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 4
Link to clone list U15993
List of clone(s)

est1=VFH128F,1,475
est2=FC-AW10F,6,480
est3=VFH128Z,481,1083
est4=FC-AW10Z,558,1148
Translated Amino Acid sequence
LTTILKQGFKFSNSQSNQIIRSYSKGLLLGQNGFDFNNRNKQIISFSSLNNCKNIKGLSF
FRITRQFSSSNTPTKNNNNNNNNNDNDNNNDNNNNENKNENEGEGEKDENKLEEVEISSE
EASSLRNKRKDKLAGMFNKPKEPVKKEEEAAAATAASEQ---

---VKEEQAKSNDVIIXPQVFTDGKGEKVVIEGDLSTFYIYTIFSALFVGTIGIAIAKLI
SDWRNSATGVLGIQQFDFVLLIQDIYFGDLKPAMEVGNKEFNEKTKKNYFFDEANIKHAT
LGDTITLIIPILQKKTNARLGHVNVDFCKEGNEMTIQNFYINAINGYVYDLPAPKHKIDT
TKERYSGKYSLEELLADPTL*nynnkeikk*knkkkikk*knkki


Translated Amino Acid sequence (All Frames)
Frame A:
fnnyfktrf*v*qftiksny*iifkrftigskwfrf***k*tnyfvfiik*l*ky*rfii
f*nnktifiikytnqk**********r****q****k*krk*g*g*kr*k*t*gs*nfir
gsfiikk*kkr*tcryv**t*rtckkrrggsssnssirtr---

---s*rgas*k**chy*xtsfyrw*r*kgcy*r*sfnllhlhyflciicwyhwycnckin
frlek*cnwctwysti*frfidsrylfw*fktcngsw**riq*kn*kellf**s*y*tcn
tw*ynyinysnftkenkckirtckc*flqrr**ndhskflyqcnqwlcl*psstkt*d*h
nkrkiqw*ifirriig*sntlkl***rnkkikk*kknkkikk*kn

Frame B:
LTTILKQGFKFSNSQSNQIIRSYSKGLLLGQNGFDFNNRNKQIISFSSLNNCKNIKGLSF
FRITRQFSSSNTPTKNNNNNNNNNDNDNNNDNNNNENKNENEGEGEKDENKLEEVEISSE
EASSLRNKRKDKLAGMFNKPKEPVKKEEEAAAATAASEQ---

---VKEEQAKSNDVIIXPQVFTDGKGEKVVIEGDLSTFYIYTIFSALFVGTIGIAIAKLI
SDWRNSATGVLGIQQFDFVLLIQDIYFGDLKPAMEVGNKEFNEKTKKNYFFDEANIKHAT
LGDTITLIIPILQKKTNARLGHVNVDFCKEGNEMTIQNFYINAINGYVYDLPAPKHKIDT
TKERYSGKYSLEELLADPTL*nynnkeikk*knkkkikk*knkki

Frame C:
*qlf*nkvlslaihnqiklldhiqkvyywvkmvsiliieinklfrfhh*iivkilkvyhf
le*qdnfhhqihqpkiiiiiiiimitiiimtiiimkiktkmrvrvkkmkinlrklkfhqr
klhh*eikekinlqvclinlknl*kkkrrqqqqqqhqnk---

---lkrsklkvmmsllxhkflqmvkvkrlllkvifqpftstlfslhyllvplvlqlqn*f
qigeivqlvylvfnnlisfy*fkifilvi*nlqwklviknsmkklkritflmklilnmqh
lviqlh*lfqfykrkqmqd*dm*mlifakkvmk*pfkisismqsmvmfmtfqhqnirltq
qkkdtvvnih*knywliqhfkiiiikk*knkkikkk*knkkikk*

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15993-1 (Contig-U15993-1Q)
/CSM_Contig/Contig-U15993-1Q.Seq.d
(1158 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15993-1 (Contig-U15993-1Q) /CSM_Contig/Conti... 854 0.0
Contig-U15984-1 (Contig-U15984-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U15766-1 (Contig-U15766-1Q) /CSM_Contig/Conti... 44 5e-04
Contig-U16291-1 (Contig-U16291-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U14995-1 (Contig-U14995-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U07417-1 (Contig-U07417-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U13957-1 (Contig-U13957-1Q) /CSM_Contig/Conti... 38 0.030
Contig-U11304-1 (Contig-U11304-1Q) /CSM_Contig/Conti... 38 0.030
Contig-U08000-1 (Contig-U08000-1Q) /CSM_Contig/Conti... 38 0.030
Contig-U16194-1 (Contig-U16194-1Q) /CSM_Contig/Conti... 36 0.12

>Contig-U15993-1 (Contig-U15993-1Q) /CSM_Contig/Contig-U15993-1Q.Seq.d
Length = 1158

Score = 854 bits (431), Expect = 0.0
Identities = 478/485 (98%)
Strand = Plus / Plus


Query: 305 gagggtgagggtgaaaaagatgaaaataaacttgaggaagttgaaatttcatcagaggaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gagggtgagggtgaaaaagatgaaaataaacttgaggaagttgaaatttcatcagaggaa 364


Query: 365 gcttcatcattaagaaataaaagaaaagataaacttgcaggtatgtttaataaacctaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gcttcatcattaagaaataaaagaaaagataaacttgcaggtatgtttaataaacctaaa 424


Query: 425 gaacctgtnnnnnnngaagaggaggcagcagcagcaacagcagcatcagaacaagannnn 484
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gaacctgtaaaaaaagaagaggaggcagcagcagcaacagcagcatcagaacaagannnn 484


Query: 485 nnnnnnagttaaagaggagcaagctaaaagtaatgatgtcattattganccacaagtttt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 nnnnnnagttaaagaggagcaagctaaaagtaatgatgtcattattganccacaagtttt 544


Query: 545 tacagatggtaaaggtgaaaaggttgttattgaaggtgatctttcaaccttttacatcta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tacagatggtaaaggtgaaaaggttgttattgaaggtgatctttcaaccttttacatcta 604


Query: 605 cactattttctctgcattatttgttggtaccattggtattgcaattgcaaaattaatttc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cactattttctctgcattatttgttggtaccattggtattgcaattgcaaaattaatttc 664


Query: 665 agattggagaaatagtgcaactggtgtacttggtattcaacaatttgatttcgttttatt 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 agattggagaaatagtgcaactggtgtacttggtattcaacaatttgatttcgttttatt 724


Query: 725 gattcaagatatttattttggtgatttaaaacctgcaatggaagttggtaataaagaatt 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gattcaagatatttattttggtgatttaaaacctgcaatggaagttggtaataaagaatt 784


Query: 785 caatg 789
|||||
Sbjct: 785 caatg 789


Score = 593 bits (299), Expect = e-169
Identities = 299/299 (100%)
Strand = Plus / Plus


Query: 803 gaattacttttttgatgaagctaatattaaacatgcaacacttggtgatacaattacatt 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gaattacttttttgatgaagctaatattaaacatgcaacacttggtgatacaattacatt 862


Query: 863 aattattccaattttacaaaagaaaacaaatgcaagattaggacatgtaaatgttgattt 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 aattattccaattttacaaaagaaaacaaatgcaagattaggacatgtaaatgttgattt 922


Query: 923 ttgcaaagaaggtaatgaaatgaccattcaaaatttctatatcaatgcaatcaatggtta 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 ttgcaaagaaggtaatgaaatgaccattcaaaatttctatatcaatgcaatcaatggtta 982


Query: 983 tgtttatgaccttccagcaccaaaacataagattgacacaacaaaagaaagatacagtgg 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 tgtttatgaccttccagcaccaaaacataagattgacacaacaaaagaaagatacagtgg 1042


Query: 1043 taaatattcattagaagaattattggctgatccaacactttaaaattataataataaag 1101
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 taaatattcattagaagaattattggctgatccaacactttaaaattataataataaag 1101


Score = 448 bits (226), Expect = e-126
Identities = 226/226 (100%)
Strand = Plus / Plus


Query: 1 tttaacaactattttaaaacaaggttttaagtttagcaattcacaatcaaatcaaattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttaacaactattttaaaacaaggttttaagtttagcaattcacaatcaaatcaaattat 60


Query: 61 tagatcatattcaaaaggtttactattgggtcaaaatggtttcgattttaataatagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagatcatattcaaaaggtttactattgggtcaaaatggtttcgattttaataatagaaa 120


Query: 121 taaacaaattatttcgttttcatcattaaataattgtaaaaatattaaaggtttatcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taaacaaattatttcgttttcatcattaaataattgtaaaaatattaaaggtttatcatt 180


Query: 181 ttttagaataacaagacaattttcatcatcaaatacaccaaccaaa 226
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttttagaataacaagacaattttcatcatcaaatacaccaaccaaa 226


>Contig-U15984-1 (Contig-U15984-1Q) /CSM_Contig/Contig-U15984-1Q.Seq.d
Length = 2010

Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus


Query: 129 ttatttcgttttcatcattaaat 151
|||||||||||||||||||||||
Sbjct: 1681 ttatttcgttttcatcattaaat 1659


>Contig-U15766-1 (Contig-U15766-1Q) /CSM_Contig/Contig-U15766-1Q.Seq.d
Length = 3592

Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 761 aatggaagttggtaataaagaa 782
||||||||||||||||||||||
Sbjct: 3174 aatggaagttggtaataaagaa 3195


Score = 30.2 bits (15), Expect = 7.2
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 32 tttagcaattcacaa 46
|||||||||||||||
Sbjct: 377 tttagcaattcacaa 391


Score = 30.2 bits (15), Expect = 7.2
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 32 tttagcaattcacaa 46
|||||||||||||||
Sbjct: 877 tttagcaattcacaa 891


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 28,620
Number of Sequences: 8402
Number of extensions: 28620
Number of successful extensions: 3613
Number of sequences better than 10.0: 432
length of query: 1158
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1142
effective length of database: 7,941,110
effective search space: 9068747620
effective search space used: 9068747620
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 3. 7
Homology vs DNA
Query= Contig-U15993-1 (Contig-U15993-1Q) /CSM_Contig/Contig-U15993-1Q.Seq.d
(1158 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 587 0.0 6
(BJ431731) Dictyostelium discoideum cDNA clone:ddv15g07, 3' ... 581 0.0 2
(C25724) Dictyostelium discoideum gamete cDNA, clone FC-AW10. 555 0.0 2
(C25723) Dictyostelium discoideum gamete cDNA, clone FC-AW10. 438 e-176 3
(BJ413378) Dictyostelium discoideum cDNA clone:ddv15g07, 5' ... 448 e-176 3
(EY351177) CAWZ17984.fwd CAWZ Helobdella robusta Primary Lat... 56 0.001 2
(AM481122) Vitis vinifera contig VV78X236115.6, whole genome... 54 0.012 1
(EX215941) AsAmIn091C12.b Plasmodium-infected mosquito midgu... 54 0.012 1
(AP005105) Oryza sativa Japonica Group genomic DNA, chromoso... 44 0.039 7
(CT027991) Mouse DNA sequence from clone RP23-418N2 on chrom... 52 0.047 1
(AY137504) Mus musculus histidine-rich glycoprotein HRG (Hrg... 52 0.047 1
(AC154540) Mus musculus BAC clone RP23-452G1 from chromosome... 52 0.047 1
(AB055898) Mus musculus MMHRG gene for histidine-rich glycop... 52 0.047 1
(AC128780) Rattus norvegicus clone CH230-301N2, WORKING DRAF... 52 0.047 1
(AC126536) Rattus norvegicus clone CH230-221C11, WORKING DRA... 52 0.047 1
(AC119503) Rattus norvegicus clone CH230-243I22, WORKING DRA... 52 0.047 1
(AC095158) Rattus norvegicus clone CH230-7M10, WORKING DRAFT... 52 0.047 1
(AZ850621) 2M0152J06R Mouse 10kb plasmid UUGC1M library Mus ... 52 0.047 1
(AL341646) Tetraodon nigroviridis genome survey sequence T3 ... 52 0.047 1
(AL299075) Tetraodon nigroviridis genome survey sequence T7 ... 52 0.047 1
(AL247036) Tetraodon nigroviridis genome survey sequence T7 ... 52 0.047 1
(BH912896) 3526_1_37_1_D06.2EL_x_1 3526 - RescueMu Grid K Ze... 52 0.047 1
(EB300864) CNSN01-F-058418-501 Normalized CNS library (juven... 52 0.047 1
(EB260595) CNSN01-C-004341-501 Normalized CNS library (juven... 52 0.047 1
(AC010119) Drosophila melanogaster strain y chromosome 2 clo... 46 0.059 2
(AC176991) Strongylocentrotus purpuratus clone R3-36P4, WORK... 44 0.084 7
(FI266188) CccaBb038-K16JR CccABb Cajanus cajan genomic clon... 48 0.11 2
(AP004573) Oryza sativa Japonica Group genomic DNA, chromoso... 44 0.14 7
(CW495855) fsbb001f287m23k0 Sorghum methylation filtered lib... 42 0.15 2
(AE014298) Drosophila melanogaster chromosome X, complete se... 48 0.15 3
(AL111168) Campylobacter jejuni subsp. jejuni NCTC 11168 com... 36 0.15 17
(CN128262) RHOH1_28_F06.b1_A002 Acid- and alkaline-treated r... 42 0.16 2
(AC207188) Zea mays chromosome 2 clone CH201-396C6; ZMMBBc03... 44 0.17 4
(CW178119) 104_591_11159391_116_36607_052 Sorghum methylatio... 42 0.18 2
(AE014134) Drosophila melanogaster chromosome 2L, complete s... 46 0.19 7
(CT033781) Mouse DNA sequence from clone RP24-85H21 on chrom... 50 0.19 1
(AL663060) Mouse DNA sequence from clone RP23-239H6 on chrom... 50 0.19 1
(AB221602) Mus musculus cDNA pooled tissues:(tissue_type=bra... 50 0.19 1
(CR382130) Yarrowia lipolytica strain CLIB122 chromosome D c... 50 0.19 1
(AB363969) Chlamydomonas reinhardtii ROC75 mRNA for RHYTHM O... 50 0.19 1
(AB363968) Chlamydomonas reinhardtii ROC75 mRNA for RHYTHM O... 50 0.19 1
(CQ614082) Sequence 41840 from Patent WO0171042. 50 0.19 1
(CQ614081) Sequence 41839 from Patent WO0171042. 50 0.19 1
(CQ606893) Sequence 34651 from Patent WO0171042. 50 0.19 1
(CQ606684) Sequence 34442 from Patent WO0171042. 50 0.19 1
(CQ587703) Sequence 15461 from Patent WO0171042. 50 0.19 1
(CQ587702) Sequence 15460 from Patent WO0171042. 50 0.19 1
(BT023818) Drosophila melanogaster SD18573 full insert cDNA. 50 0.19 1
(BT016088) Drosophila melanogaster LD41913 full insert cDNA. 50 0.19 1
(BT011178) Drosophila melanogaster RE44946 full insert cDNA. 50 0.19 1
(BT011080) Drosophila melanogaster SD01785 full insert cDNA. 50 0.19 1
(AY219709) Drosophila virilis clone V2 non-LTR retrotranspos... 50 0.19 1
(AY219708) Drosophila virilis clone V8 non-LTR retrotranspos... 50 0.19 1
(AY118654) Drosophila melanogaster SD06902 full insert cDNA. 50 0.19 1
(AM269894) Eimeria tenella chromosome 1, ordered contigs. 50 0.19 1
(AM262815) Drosophila melanogaster mRNA for PP1 interacting ... 50 0.19 1
(AE014297) Drosophila melanogaster chromosome 3R, complete s... 50 0.19 1
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 50 0.19 1
(AC099310) Drosophila melanogaster, chromosome 3R, region 94... 50 0.19 1
(AC069458) Drosophila melanogaster 3L BAC RP98-23N10 (Roswel... 50 0.19 1
(AC009846) Drosophila melanogaster, chromosome 3R, region 94... 50 0.19 1
(AC008360) Drosophila melanogaster, chromosome 3R, region 87... 50 0.19 1
(AC007723) Drosophila melanogaster, chromosome 3R, region 87... 50 0.19 1
(AC153058) Bos taurus clone CH240-18J14, *** SEQUENCING IN P... 50 0.19 1
(AC151108) Mus musculus chromosome 13 clone RP24-85H21 map 1... 50 0.19 1
(AC111552) Rattus norvegicus clone CH230-179D7, WORKING DRAF... 50 0.19 1
(AC110477) Rattus norvegicus clone CH230-27J21, *** SEQUENCI... 50 0.19 1
(AC095589) Rattus norvegicus clone CH230-8I17, *** SEQUENCIN... 50 0.19 1
(AC189092) Zea mays chromosome 3 clone CH201-31D19; ZMMBBc00... 50 0.19 1
(AC188983) Zea mays chromosome 9 clone CH201-462O20; ZMMBBc0... 50 0.19 1
(AC015173) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 50 0.19 1
(AC012997) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 50 0.19 1
(AC012899) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 50 0.19 1
(AC008193) Drosophila melanogaster strain y chromosome 3 clo... 50 0.19 1
(AC007973) Drosophila melanogaster strain y chromosome 3 clo... 50 0.19 1
(AL063160) Drosophila melanogaster genome survey sequence TE... 50 0.19 1
(CW925232) EDCB940TR A. castellanii, 6-8 kb library from tot... 50 0.19 1
(AG952561) Drosophila sechellia DNA, clone: DSE1-004N01.R.fa... 50 0.19 1
(CG034343) PUFSA90TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 50 0.19 1
(EH385838) 837 E. acervulina cDNA from second generation mer... 50 0.19 1
(EE109849) EST00556 unicellular microalgal cDNA Library Nann... 50 0.19 1
(EC739954) NUE00000831 Capsaspora owczarzaki Amplicon expres... 50 0.19 1
(EC736458) NUE00009354 Capsaspora owczarzaki Amplicon expres... 50 0.19 1
(EC735835) NUE00001074 Capsaspora owczarzaki Amplicon expres... 50 0.19 1
(EC267357) 523204 MN08 Drosophila melanogaster cDNA clone 28... 50 0.19 1
(EC263859) 524740 MN08 Drosophila melanogaster cDNA clone 29... 50 0.19 1
(EC263525) 572876 MN08 Drosophila melanogaster cDNA clone 30... 50 0.19 1
(EB590377) AGENCOURT_50973676 D. ananassae EST Drosophila an... 50 0.19 1
(EB582852) AGENCOURT_51879266 D. ananassae EST Drosophila an... 50 0.19 1
(EB547887) AGENCOURT_52964006 D. erecta EST Drosophila erect... 50 0.19 1
(EB543889) AGENCOURT_52938144 D. erecta EST Drosophila erect... 50 0.19 1
(EB542519) AGENCOURT_52942479 D. erecta EST Drosophila erect... 50 0.19 1
(EB539548) AGENCOURT_52949613 D. erecta EST Drosophila erect... 50 0.19 1
(EB536466) AGENCOURT_52963932 D. erecta EST Drosophila erect... 50 0.19 1
(DY880537) AresSEQ9162 Amorphotheca resinae pBluescript (Eco... 50 0.19 1
(DW248238) pOP-EON00533_EST_C_1_pSK_SK EON (Oil Palm Embryoi... 50 0.19 1
(DW038929) CFW281-A09.y1d-s SHGC-CFW2 Gasterosteus aculeatus... 50 0.19 1
(DT770390) 125670112 TH1 Tribolium castaneum cDNA clone 80M7... 50 0.19 1
(DR764173) duckAP26_14G3 Duck spleen ZAP Express cDNA Librar... 50 0.19 1
(DN686508) CGX47-D09.y1d-s SHGC-CGX Gasterosteus aculeatus c... 50 0.19 1
(DN686507) CGX47-D09.x1d-t SHGC-CGX Gasterosteus aculeatus c... 50 0.19 1
(CR534708) Anopheles gambiae EST, clone AGAEY22TR. 50 0.19 1
(AL932867) Anopheles gambiae EST, clone NAP1-P111-E-01-5. 50 0.19 1
(CO338641) EN17249.5prime Exelixis FlyTag MN08 BlueScript Dr... 50 0.19 1
(CF879159) tric019xf19.b13 T.reesei mycelial culture, Versio... 50 0.19 1
(CF869496) tric019xi11.b1 T.reesei mycelial culture, Version... 50 0.19 1
(CD507874) CDA87-F01.y1d-s SHGC-CDA Gasterosteus aculeatus c... 50 0.19 1
(CD497722) CDA29-E01.y1d-s SHGC-CDA Gasterosteus aculeatus c... 50 0.19 1
(CD497721) CDA29-E01.x1d-t SHGC-CDA Gasterosteus aculeatus c... 50 0.19 1
(CD497699) CDA29-D01.y1d-s SHGC-CDA Gasterosteus aculeatus c... 50 0.19 1
(CD493394) CDA04-H05.y1d-s SHGC-CDA Gasterosteus aculeatus c... 50 0.19 1
(CD493383) CDA04-G09.y1d-s SHGC-CDA Gasterosteus aculeatus c... 50 0.19 1
(CB899638) tric019xi11 T.reesei mycelial culture, Version 3 ... 50 0.19 1
(BX622888) Anopheles gambiae EST, clone ANGNP1302F10T7. 50 0.19 1
(BX621583) Anopheles gambiae EST, clone ANGNP1113C07T7. 50 0.19 1
(BM653884) 17000687379093 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.19 1
(BM652946) 17000687377245 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.19 1
(BM649084) 17000687368196 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.19 1
(BM648105) 17000687324787 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.19 1
(BM647378) 17000687323791 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.19 1
(BM645551) 17000687316720 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.19 1
(BM644978) 17000687315496 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.19 1
(BM643375) 17000687312285 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.19 1
(BM642770) 17000687310517 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.19 1
(BM639145) 17000687567935 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.19 1
(BM638551) 17000687566796 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.19 1
(BM631745) 17000668812746 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.19 1
(BM629096) 17000687499538 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.19 1
(BM624828) 17000659345377 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.19 1
(BM620605) 17000687445218 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.19 1
(BM615408) 17000687146750 A.Gam.ad.cDNA.blood1 Anopheles gam... 50 0.19 1
(BM615230) 17000687146149 A.Gam.ad.cDNA.blood1 Anopheles gam... 50 0.19 1
(BM598349) 17000687619689 A.Gam.ad.cDNA.blood1 Anopheles gam... 50 0.19 1
(AA951674) LD32333.5prime LD Drosophila melanogaster embryo ... 50 0.19 1
(GH082314) G992P155FO24.T0 Neurospora crassa cDNA - 1 hour H... 50 0.19 1
(GE952863) G1176P152RL21.T0 Neurospora crassa cDNA - 1 hour ... 50 0.19 1
(GE210436) CUPO5266.fwd CUPO Emiliania huxleyi CCMP1516 F/2 ... 50 0.19 1
(GE210435) CUPO5266.rev CUPO Emiliania huxleyi CCMP1516 F/2 ... 50 0.19 1
(GE207147) CUPO2969.fwd CUPO Emiliania huxleyi CCMP1516 F/2 ... 50 0.19 1
(GE207146) CUPO2969.rev CUPO Emiliania huxleyi CCMP1516 F/2 ... 50 0.19 1
(GE207048) CUPO2899.fwd CUPO Emiliania huxleyi CCMP1516 F/2 ... 50 0.19 1
(GE207047) CUPO2899.rev CUPO Emiliania huxleyi CCMP1516 F/2 ... 50 0.19 1
(GE152764) CAHO4137.fwd CAHO Emiliania huxleyi CCMP1516 day ... 50 0.19 1
(FL391191) 25535216 CERES-503 Zea mays cDNA clone 1675568 5'... 50 0.19 1
(FL372539) 25550771 CERES-502 Zea mays cDNA clone 1690739 5'... 50 0.19 1
(FF360325) BG02039B2C04.r1 BG02 - primary and normalized lib... 50 0.19 1
(FF360324) BG02039B2C04.f1 BG02 - primary and normalized lib... 50 0.19 1
(FD719247) CAAA3877.rev CAAA Petromyzon marinus Petromyzon m... 50 0.19 1
(FD460210) LARVD88TR Haematobia irritans 1st Instar Larvae H... 50 0.19 1
(CN146684) WOUND1_43_C06.b1_A002 Wounded leaves Sorghum bico... 42 0.20 2
(DR147243) 49312905 Drosophila pseudoobscura embryonic cDNA ... 44 0.24 2
(AY058253) Drosophila melanogaster GH01409 full length cDNA. 46 0.26 2
(AC168249) Strongylocentrotus purpuratus clone R3-1001J7, WO... 42 0.26 5
(AC084747) Mus musculus clone RP23-364A14, WORKING DRAFT SEQ... 40 0.27 6
(AC171859) Bos taurus clone CH240-299O6, WORKING DRAFT SEQUE... 46 0.30 2
(AC171129) Helobdella robusta clone CH306-1A11, complete seq... 44 0.35 4
(CQ582947) Sequence 10705 from Patent WO0171042. 46 0.35 2
(AC184312) Strongylocentrotus purpuratus clone R3-3093C24, W... 42 0.36 6
(AC208761) Saimiri boliviensis boliviensis clone CH254-218O1... 40 0.39 8
(AC153720) Bos taurus clone CH240-23F3, WORKING DRAFT SEQUEN... 40 0.45 4
(AC008325) Drosophila melanogaster clone BACR05M06, complete... 42 0.47 4
(CQ594320) Sequence 22078 from Patent WO0171042. 44 0.50 3
(EI908704) VUH2-40G2TR VUUBBa (VUH2) Vigna unguiculata genom... 38 0.53 2
(DY470435) et024G03 Normalized Eimeria tenella cDNA library ... 36 0.54 2
(DY469738) et018D05 Normalized Eimeria tenella cDNA library ... 36 0.54 2
(BJ385345) Dictyostelium discoideum cDNA clone:ddc54l13, 3' ... 44 0.56 2
(EA685663) Sequence 64542 from patent US 7365185. 46 0.57 3
(AU060710) Dictyostelium discoideum slug cDNA, clone SLB193. 44 0.59 2
(AC159923) Carollia perspicillata clone 560B14, WORKING DRAF... 42 0.59 3
(CQ582500) Sequence 10258 from Patent WO0171042. 42 0.60 2
(AC230358) Bos taurus clone CH240-511J9, WORKING DRAFT SEQUE... 42 0.61 4
(BJ406421) Dictyostelium discoideum cDNA clone:dds35o04, 3' ... 44 0.62 2
(CP000745) Methanococcus maripaludis C7, complete genome. 34 0.63 18
(AL391748) Human chromosome 14 DNA sequence BAC R-630G18 of ... 40 0.64 5
(BJ357879) Dictyostelium discoideum cDNA clone:dda65b06, 3' ... 44 0.66 2
(BJ434140) Dictyostelium discoideum cDNA clone:ddv16b06, 3' ... 44 0.66 2
(EY445445) CBAY7776.fwd CBAY Tubifex tubifex Embryos and juv... 42 0.66 2
(EY438224) CBAY2365.rev CBAY Tubifex tubifex Embryos and juv... 42 0.68 2
(EY452588) CBAZ5999.fwd CBAZ Tubifex tubifex Embryos and juv... 42 0.69 2
(BJ372243) Dictyostelium discoideum cDNA clone:ddc11g22, 3' ... 44 0.69 2
(EY452587) CBAZ5999.rev CBAZ Tubifex tubifex Embryos and juv... 42 0.70 2
(EY438225) CBAY2365.fwd CBAY Tubifex tubifex Embryos and juv... 42 0.70 2
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 34 0.70 16
(EY440903) CBAY4437.rev CBAY Tubifex tubifex Embryos and juv... 42 0.71 2
(EY440904) CBAY4437.fwd CBAY Tubifex tubifex Embryos and juv... 42 0.73 2
(CU464080) Zebrafish DNA sequence from clone CH211-26B3 in l... 48 0.74 1
(BC163256) Danio rerio neuronal PAS domain protein 2, mRNA (... 48 0.74 1
(AY437396) Hippocampus comes hemoglobin alpha chain mRNA, co... 48 0.74 1
(AB087255) Danio rerio zfClock2 mRNA for bHLH-PAS transcript... 48 0.74 1
(BK005744) TPA_exp: Drosophila melanogaster dosage compensat... 48 0.74 1
(BC085318) Mus musculus mastermind like 3 (Drosophila), mRNA... 48 0.74 1
(AK173269) Mus musculus mRNA for mKIAA1816 protein. 48 0.74 1
(AC154104) Mus musculus BAC clone RP24-555C7 from 7, complet... 48 0.74 1
(AC133203) Mus musculus BAC clone RP23-85M7 from chromosome ... 48 0.74 1
(AC122383) Mus musculus BAC clone RP23-479O8 from chromosome... 48 0.74 1
(AC122261) Mus musculus BAC clone RP23-187F24 from 15, compl... 48 0.74 1
(AC116729) Mus musculus chromosome 3, clone RP23-346I1, comp... 48 0.74 1
(CU633900) Podospora anserina genomic DNA chromosome 7, supe... 48 0.74 1
(BX908808) Neurospora crassa DNA linkage group IV Cosmid con... 48 0.74 1
(DD393833) Cell Cycle Progression Proteins. 48 0.74 1
(DD380308) A polynucleotide for detecting heavy metal respon... 48 0.74 1
(CS469832) Sequence 23 from Patent EP1748065. 48 0.74 1
(CQ847718) Sequence 23 from Patent WO2004063362. 48 0.74 1
(CQ594858) Sequence 22616 from Patent WO0171042. 48 0.74 1
(CQ594857) Sequence 22615 from Patent WO0171042. 48 0.74 1
(CQ592710) Sequence 20468 from Patent WO0171042. 48 0.74 1
(CQ592709) Sequence 20467 from Patent WO0171042. 48 0.74 1
(CQ583158) Sequence 10916 from Patent WO0171042. 48 0.74 1
(CQ583157) Sequence 10915 from Patent WO0171042. 48 0.74 1
(CQ574179) Sequence 1937 from Patent WO0171042. 48 0.74 1
(AR509833) Sequence 14793 from patent US 6703491. 48 0.74 1
(Z68132) Caenorhabditis elegans Cosmid F09C8. 48 0.74 1
(X64412) D.melanogaster orb mRNA. 48 0.74 1
(EU209271) Armigeres subalbatus ASAP ID ACN-0185640 putative... 48 0.74 1
(BT032862) Drosophila melanogaster RE59351 full insert cDNA. 48 0.74 1
(AY900632) Drosophila buzzatii clone BAC 40C11, complete seq... 48 0.74 1
(AY075390) Drosophila melanogaster LD25781 full length cDNA. 48 0.74 1
(AY071225) Drosophila melanogaster RE26660 full length cDNA. 48 0.74 1
(AY052069) Drosophila melanogaster SD02279 full length cDNA. 48 0.74 1
(AF125986) Drosophila melanogaster putative transcription fa... 48 0.74 1
(AE013599) Drosophila melanogaster chromosome 2R, complete s... 48 0.74 1
(AC104627) Drosophila melanogaster X BAC RP98-4A11 (Roswell ... 48 0.74 1
(AC104610) Drosophila melanogaster 3L BAC RP98-35J16 (Roswel... 48 0.74 1
(AC023741) Drosophila melanogaster X BAC RP98-23O9 (Roswell ... 48 0.74 1
(AC023674) Drosophila melanogaster 3L BAC RP98-11E6 (Roswell... 48 0.74 1
(AC010670) Drosophila melanogaster, chromosome 3R, region 94... 48 0.74 1
(AC010661) Drosophila melanogaster 3L BAC RP98-13A12 (Roswel... 48 0.74 1
(AC008365) Drosophila melanogaster clone BACR03N12, complete... 48 0.74 1
(AC007472) Drosophila melanogaster, chromosome 2R, region 49... 48 0.74 1
(AB023583) Drosophila melanogaster brinker mRNA for Brk, com... 48 0.74 1
(AL160398) Human DNA sequence from clone RP11-15N12 on chrom... 48 0.74 1
(AC141788) Apis mellifera clone CH224-59E4, WORKING DRAFT SE... 48 0.74 1
(AC141677) Apis mellifera clone CH224-54J2, WORKING DRAFT SE... 48 0.74 1
(AC131473) Rattus norvegicus clone CH230-90M18, WORKING DRAF... 48 0.74 1
(AC125989) Rattus norvegicus clone CH230-76E3, WORKING DRAFT... 48 0.74 1
(CU457446) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.74 1
(AC230707) Bos taurus clone CH240-501J19, WORKING DRAFT SEQU... 48 0.74 1
(AC179333) Strongylocentrotus purpuratus clone R3-1102K17, W... 48 0.74 1
(AC020026) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 48 0.74 1
(AC020019) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 48 0.74 1
(AC014852) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 48 0.74 1
(AC014811) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 48 0.74 1
(AC014231) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 48 0.74 1
(AK157983) Mus musculus adult inner ear cDNA, RIKEN full-len... 48 0.74 1
(AZ856319) 2M0160N09R Mouse 10kb plasmid UUGC1M library Mus ... 48 0.74 1
(EI818358) POTJ578TF Solanum tuberosum RHPOTKEY BAC ends Sol... 48 0.74 1
(EI382553) POTBW79TF Solanum tuberosum RHPOTKEY BAC ends Sol... 48 0.74 1
(DX801622) 2989477 VV10 Chlamydomonas reinhardtii genomic cl... 48 0.74 1
(DX764155) 2627668 VV07 Ustilago maydis genomic clone 116114... 48 0.74 1
(DX705052) 2505160 VV03 Ustilago maydis genomic clone 107400... 48 0.74 1
(DX602957) 3599922 UMB Ustilago maydis genomic clone 1576070... 48 0.74 1
(DU384548) 1098313104767 CHORI-243 Ovis aries genomic clone ... 48 0.74 1
(AG515294) Mus musculus molossinus DNA, clone:MSMg01-420G19.... 48 0.74 1
(AG500793) Mus musculus molossinus DNA, clone:MSMg01-401G08.... 48 0.74 1
(AG311760) Mus musculus molossinus DNA, clone:MSMg01-094K10.... 48 0.74 1
(EC240150) 7683 CK01 Drosophila melanogaster cDNA clone CK01... 48 0.74 1
(EC207344) 61260 CK01 Drosophila melanogaster cDNA clone CK0... 48 0.74 1
(EC058776) 81932 CK01 Drosophila melanogaster cDNA clone CK0... 48 0.74 1
(EB889141) 9919304 ZF26XL Danio rerio cDNA clone 3513663, mR... 48 0.74 1
(EB888897) 9910925 ZF26XL Danio rerio cDNA clone 3517119, mR... 48 0.74 1
(EB628717) AGENCOURT_56979552 D. grimshawi EST Drosophila gr... 48 0.74 1
(EB623255) AGENCOURT_55024306 D. mojavensis EST Drosophila m... 48 0.74 1
(EB616321) AGENCOURT_56970437 D. grimshawi EST Drosophila gr... 48 0.74 1
(EB598267) AGENCOURT_54967628 D. mojavensis EST Drosophila m... 48 0.74 1
(EB558239) AGENCOURT_51186410 D. virilis EST Drosophila viri... 48 0.74 1
(EB320313) CNSN01-F-086034-501 Normalized CNS library (juven... 48 0.74 1
(EB025259) LscoSEQ520 Leucosporidium scottii pBluescript (Ec... 48 0.74 1
(AV197197) Caenorhabditis elegans cDNA clone:yk663c7 : 5' en... 48 0.74 1
(AV188550) Caenorhabditis elegans cDNA clone:yk525h1 : 5' en... 48 0.74 1
(DB946908) Manihot esculenta mRNA, clone: CAS01_026_F04, 3'end. 48 0.74 1
(AU197187) Porphyra yezoensis cDNA, clone:PFL100h12_r, 5'end. 48 0.74 1
(CX283916) SPLEEN-03-A01-T3 Paralichthys olivaceus cDNA libr... 48 0.74 1
(CV783858) UI-M-HY0p-csx-o-12-0-UI.r1 NIH_BMAP_HY0p Mus musc... 48 0.74 1
(CO679875) DG11-108b16 DG11-kidney Canis lupus familiaris cD... 48 0.74 1
(CO547922) LyEST4590 Sea lamprey LyEST Petromyzon marinus cD... 48 0.74 1
(CO289397) EK070933.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 48 0.74 1
(CO285964) EK061318.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 48 0.74 1
(CO196311) EK003006.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 48 0.74 1
(CO196306) EK002922.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 48 0.74 1
(CO179394) EK059301.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 48 0.74 1
(CO155327) EN05835.5prime Exelixis FlyTag MN08 BlueScript Dr... 48 0.74 1
(CK413808) AUF_IpGil_06_c16 Ictalurus punctatus gill cDNA li... 48 0.74 1
(CK133462) RE26660.3prime RE Drosophila melanogaster normali... 48 0.74 1
(CF727183) UI-M-HB0-ckj-j-21-0-UI.r1 NIH_BMAP_HB0 Mus muscul... 48 0.74 1
(CD579016) UI-M-FY0-cgo-b-22-0-UI.r1 NIH_BMAP_FY0 Mus muscul... 48 0.74 1
(CD569724) EtESTeg04a03.y1 Eimeria tenella S5-2 Excised cDNA... 48 0.74 1
(CD344301) EtESTef79e07.y1 Eimeria tenella S5-2 Excised cDNA... 48 0.74 1
(CB523259) UI-M-GH0-ceq-f-18-0-UI.r1 NIH_BMAP_GH0 Mus muscul... 48 0.74 1
(CB522386) UI-M-GH0-cep-j-13-0-UI.r1 NIH_BMAP_GH0 Mus muscul... 48 0.74 1
(BY752724) Mus musculus adult inner ear cDNA, RIKEN full-len... 48 0.74 1
(BQ966303) QHB25H03.yg.ab1 QH_ABCDI sunflower RHA801 Heliant... 48 0.74 1
(BQ829038) LL6in20026 AFT024-subtracted library Mus musculus... 48 0.74 1
(BQ550344) H4002G10-5 NIA Mouse 7.4K cDNA Clone Set Mus musc... 48 0.74 1
(BM871902) mgns015xN22f.b Magnaporthe grisea NS Uni-Zap XR L... 48 0.74 1
(BM637050) 17000687563465 A.Gam.ad.cDNA1 Anopheles gambiae c... 48 0.74 1
(BM590724) 17000687384184 A.Gam.ad.cDNA.blood1 Anopheles gam... 48 0.74 1
(BJ766437) Caenorhabditis elegans cDNA clone:yk1646g02 : 5' ... 48 0.74 1
(BJ764640) Caenorhabditis elegans cDNA clone:yk1613h04 : 5' ... 48 0.74 1
(BJ124373) Caenorhabditis elegans cDNA clone:yk1310f01 : 5' ... 48 0.74 1
(BJ120176) Caenorhabditis elegans cDNA clone:yk1252h02 : 5' ... 48 0.74 1
(BJ102975) Caenorhabditis elegans cDNA clone:yk1044g10 : 5' ... 48 0.74 1
(BJ102800) Caenorhabditis elegans cDNA clone:yk1042g11 : 5' ... 48 0.74 1
(BI895370) EtESTea34b03.y1 Eimeria S5-2 Sporozoite stage Eim... 48 0.74 1
(BI621315) RH52638.5prime RH Drosophila melanogaster normali... 48 0.74 1
(BI585557) RH25163.5prime RH Drosophila melanogaster normali... 48 0.74 1
(BI585280) RH24868.5prime RH Drosophila melanogaster normali... 48 0.74 1
(BI585099) RH24568.5prime RH Drosophila melanogaster normali... 48 0.74 1
(AA898479) NCM5F1T7 Mycelial Neurospora crassa cDNA clone NM... 48 0.74 1
(AA696063) GM04989.5prime GM Drosophila melanogaster ovary B... 48 0.74 1
(BF101421) 601753227F1 NCI_CGAP_Mam1 Mus musculus cDNA clone... 48 0.74 1
(BE669808) 7e25b06.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone ... 48 0.74 1
(BB661920) Mus musculus 16 days neonate heart cDNA, RIKEN fu... 48 0.74 1
(W28637) 49g3 Human retina cDNA randomly primed sublibrary H... 48 0.74 1
(FK711462) pl_021-F1 Ilyanassa (snail) 0-48h Ilyanassa obsol... 48 0.74 1
(FE736084) SB06020B2G11.f1 Normalized subtracted Keck-Tagu L... 48 0.74 1
(FD065397) CBPO9161.b1 CBPO: Normalized channel catfish cDNA... 48 0.74 1
(FD055015) CBPO3434.b1 CBPO: Normalized channel catfish cDNA... 48 0.74 1
(FD035286) CBCZ6790.b1 CBCZ: cDNA library made from Channel ... 48 0.74 1
(EY338655) CAWY9157.rev CAWY Helobdella robusta Subtracted E... 48 0.74 1
(EY269087) BF01048B2A05.f1 Normalized subtracted keck librar... 48 0.74 1
(EY235228) CATW8454.rev CATW Aspergillus niger Pelleted fung... 48 0.74 1
(EV409442) ALB_04H14_F AFAa_Sm Anopheles albimanus cDNA clon... 48 0.74 1
(EY444727) CBAY7263.fwd CBAY Tubifex tubifex Embryos and juv... 42 0.75 2
(EK525427) 1095515640007 Global-Ocean-Sampling_GS-32-01-01-1... 38 0.82 2
(AC203230) Zea mays chromosome 6 clone CH201-64L8; ZMMBBc006... 42 0.83 5
(EK496402) 1095505159602 Global-Ocean-Sampling_GS-32-01-01-1... 38 0.86 2
(EL502910) E07_PFLAB1-LARGE-PLATE13B.AB1 Blood stage Plasmod... 28 0.87 4
(AE014829) Plasmodium falciparum 3D7 chromosome 10 section 1... 34 0.87 10
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 34 0.89 9
(EL500824) 045_PFLAB1-M-P15B.AB1 Blood stage Plasmodium falc... 28 0.93 4
(AL445563) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 30 0.94 12
(AC221639) Bos taurus clone CH240-389K19, WORKING DRAFT SEQU... 36 0.95 5
(DR144146) 49339491 Drosophila pseudoobscura embryonic cDNA ... 44 0.96 2
(DR148807) 49074480 Drosophila pseudoobscura embryonic cDNA ... 44 0.99 2
(DR144190) 49300851 Drosophila pseudoobscura embryonic cDNA ... 44 1.00 2
(DR153844) 49222938 Drosophila pseudoobscura embryonic cDNA ... 44 1.0 2
(EL500286) 020_PFLAB1-M-P15B.AB1 Blood stage Plasmodium falc... 28 1.0 4
(AC019869) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 42 1.1 4
(AC017385) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 42 1.1 3
(AC014816) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 44 1.3 3
(EL502580) C12_PFLAB1-M-PLATE8B.AB1 Blood stage Plasmodium f... 28 1.4 4
(EL501745) 089_PFLAB1-M-P23B.AB1 Blood stage Plasmodium falc... 28 1.5 4
(CW764601) OG_BBa0075N13.r OG_BBa Oryza glaberrima genomic c... 44 1.6 2
(AP004059) Oryza sativa Japonica Group genomic DNA, chromoso... 44 1.6 3
(AC168877) Bos taurus clone CH240-204G14, WORKING DRAFT SEQU... 34 1.9 8
(AC007769) Drosophila melanogaster, chromosome 3R, region 88... 46 1.9 5
(AC173035) Bos taurus clone CH240-247K19, WORKING DRAFT SEQU... 38 2.0 4
(AC012892) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 40 2.0 5
(FF563644) TT1B632TH Tetrahymena thermophila SB210 cDNA libr... 42 2.0 2
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 32 2.0 15
(FM012181) Dicentrarchus labrax EST, clone cDN27P0005D17, 5'... 44 2.2 2
(EK184861) 1095458140158 Global-Ocean-Sampling_GS-31-01-01-1... 36 2.2 2
(AC014385) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 42 2.3 2
(AC164728) Bos taurus clone CH240-156I7, *** SEQUENCING IN P... 34 2.3 7
(AC216469) Populus trichocarpa clone POP036-C22, complete se... 34 2.3 7
(AC160733) Bos taurus clone CH240-85J18, WORKING DRAFT SEQUE... 44 2.4 4
(AC171790) Bos taurus clone CH240-279F9, WORKING DRAFT SEQUE... 42 2.4 4
(AL845523) Mouse DNA sequence from clone RP23-290B1 on chrom... 46 2.4 2
(AC219445) Bos taurus clone CH240-340M16, WORKING DRAFT SEQU... 46 2.5 4
(AC013432) Drosophila melanogaster, chromosome X, region 15F... 36 2.5 7
(AC110399) Rattus norvegicus clone CH230-38C1, WORKING DRAFT... 42 2.5 2
(BX649503) Zebrafish DNA sequence from clone DKEYP-90A8 in l... 38 2.5 8
(EB533601) AGENCOURT_52937875 D. erecta EST Drosophila erect... 42 2.6 2
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 32 2.6 20
(FE385743) CBNT4053.rev CBNT_Daphnia_pulex_Chosen_One_Librar... 44 2.6 2
(U26846) Drosophila virilis alcohol dehydrogenase (Adh-1) ge... 46 2.6 2
(AC170384) Bos taurus clone CH240-212G13, WORKING DRAFT SEQU... 36 2.7 7
(CW873632) she2h94-9.b_020.ab1 Whole-genome shotgun library ... 42 2.7 2
(CW848031) CMHD-GT_181B3-3 GTL_R1_Gen-SD5 Mus musculus cDNA ... 42 2.8 2
(BZ535119) OGAJS27TC ZM2_0.7_1.5_KB Zea mays genomic clone Z... 44 2.8 2
(FH729674) CHO_OF5099xl16f1.ab1 CHO_OF5 Nicotiana tabacum ge... 44 2.8 2
(AC134561) Mus musculus BAC clone RP24-111C16 from chromosom... 42 2.8 3
(EJ256825) 1095349014717 Global-Ocean-Sampling_GS-27-01-01-1... 36 2.9 2
(AC134818) Homo sapiens chromosome 5 clone RP11-184G11, comp... 46 2.9 4
(AC179943) Strongylocentrotus purpuratus clone R3-22B7, WORK... 38 2.9 3
(CR589876) Zebrafish DNA sequence from clone DKEY-53I3 in li... 46 2.9 1
(CR390848) Gallus gallus finished cDNA, clone ChEST970i13. 46 2.9 1
(BC171392) Danio rerio transmembrane protein 57b, mRNA (cDNA... 46 2.9 1
(EF059473) Synthetic construct Saccharomyces cerevisiae clon... 46 2.9 1
(DQ895831) Synthetic construct Homo sapiens clone IMAGE:1000... 46 2.9 1
(DQ892600) Synthetic construct clone IMAGE:100005230; FLH188... 46 2.9 1
(CU680258) Synthetic construct Homo sapiens gateway clone IM... 46 2.9 1
(BV264888) S235P6332RH10.T0 ItalianGreyhound Canis familiari... 46 2.9 1
(BC085511) Mus musculus E1A binding protein p400, mRNA (cDNA... 46 2.9 1
(BC052044) Mus musculus TOX high mobility group box family m... 46 2.9 1
(BC040256) Mus musculus E1A binding protein p400, mRNA (cDNA... 46 2.9 1
(BC022153) Mus musculus E1A binding protein p400, mRNA (cDNA... 46 2.9 1
(AL731789) Mouse DNA sequence from clone RP23-52F6 on chromo... 46 2.9 1
(AL670462) Mouse DNA sequence from clone RP23-225F2 on chrom... 46 2.9 1
(AK122517) Mus musculus premature mRNA for mKIAA1498 protein. 46 2.9 1
(AC161348) Mus musculus chromosome 5, clone RP23-393E10, com... 46 2.9 1
(AC140198) Mus musculus BAC clone RP23-255C4 from 16, comple... 46 2.9 1
(AC136987) Mus musculus chromosome 16, clone RP24-129J16, co... 46 2.9 1
(AC134985) Mus musculus chromosome 5, clone RP24-432L3, comp... 46 2.9 1
(AC127294) Mus musculus BAC clone RP23-386L1 from chromosome... 46 2.9 1
(AC125125) Mus musculus BAC clone RP24-274E6 from chromosome... 46 2.9 1
(AC124467) Mus musculus BAC clone RP24-163L18 from chromosom... 46 2.9 1
(AC123060) Mus musculus chromosome 6 clone RP23-214M22, comp... 46 2.9 1
(AC116782) Mus musculus chromosome 5, clone RP24-145A24, com... 46 2.9 1
(AC102874) Mus musculus chromosome 1, clone RP24-500O1, comp... 46 2.9 1
(AC102637) Mus musculus chromosome 6, clone RP23-216B9, comp... 46 2.9 1
(AB092695) Mus musculus mRNA for mDomino-S, complete cds. 46 2.9 1
(AB092694) Mus musculus mRNA for mDomino, complete cds. 46 2.9 1
(Z38062) S.cerevisiae chromosome IX cosmid 9687. 46 2.9 1
(X81875) N.crassa cpc-2 gene. 46 2.9 1
(X79743) S.cerevisiae BET1, PAN1 PRI1 and STS1 genes. 46 2.9 1
(CU406679) Oryza rufipogon (W1943) cDNA clone: ORW1943C111K0... 46 2.9 1
(CU406578) Oryza rufipogon (W1943) cDNA clone: ORW1943C112G1... 46 2.9 1
(BX908811) Neurospora crassa DNA linkage group VI Cosmid con... 46 2.9 1
(AP008213) Oryza sativa (japonica cultivar-group) genomic DN... 46 2.9 1
(AP006497) Cyanidioschyzon merolae DNA, chromosome 15, compl... 46 2.9 1
(AP003826) Oryza sativa Japonica Group genomic DNA, chromoso... 46 2.9 1
(AK288122) Oryza sativa Japonica Group cDNA, clone: J080071L... 46 2.9 1
(DL210566) Full length cDNA. 46 2.9 1
(DL074502) CHEMOKINE-BINDING PROTEIN AND METHODS OF USE. 46 2.9 1
(DL074420) CHEMOKINE-BINDING PROTEIN AND METHODS OF USE. 46 2.9 1
(DJ362887) THAP PROTEINS AS NUCLEAR RECEPTORS FOR CHEMOKINES... 46 2.9 1
(DJ362805) THAP PROTEINS AS NUCLEAR RECEPTORS FOR CHEMOKINES... 46 2.9 1
(DJ302886) Method for identification of useful proteins deri... 46 2.9 1
(DJ206562) Method for identification of useful proteins deri... 46 2.9 1
(DJ128695) Method for detection of diseases or disease markers. 46 2.9 1
(DJ032224) BIOMARKERS OF CYCLIN-DEPENDENT KINASE MODULATION. 46 2.9 1
(DJ025877) Genome-wide DNA marker of Saccharomyces cerevisiae. 46 2.9 1
(DD248240) NOVEL DEATH ASSOCIATED PROTEINS OF THE THAP1 FAMI... 46 2.9 1
(DD248158) NOVEL DEATH ASSOCIATED PROTEINS OF THE THAP1 FAMI... 46 2.9 1
(CS789148) Sequence 404 from Patent WO2005031001. 46 2.9 1
(CS119582) Sequence 1629 from Patent WO2005054508. 46 2.9 1
(CQ974005) Sequence 257 from Patent WO2004111087. 46 2.9 1
(CQ973918) Sequence 170 from Patent WO2004111087. 46 2.9 1
(CQ959567) Sequence 257 from Patent WO2004055050. 46 2.9 1
(CQ959480) Sequence 170 from Patent WO2004055050. 46 2.9 1
(CQ849943) Sequence 412 from Patent EP1447413. 46 2.9 1
(CQ612249) Sequence 40007 from Patent WO0171042. 46 2.9 1
(CQ612248) Sequence 40006 from Patent WO0171042. 46 2.9 1
(CQ606402) Sequence 34160 from Patent WO0171042. 46 2.9 1
(CQ606401) Sequence 34159 from Patent WO0171042. 46 2.9 1
(CQ601557) Sequence 29315 from Patent WO0171042. 46 2.9 1
(CQ601556) Sequence 29314 from Patent WO0171042. 46 2.9 1
(CQ596366) Sequence 24124 from Patent WO0171042. 46 2.9 1
(CQ596330) Sequence 24088 from Patent WO0171042. 46 2.9 1
(CQ590870) Sequence 18628 from Patent WO0171042. 46 2.9 1
(CQ582948) Sequence 10706 from Patent WO0171042. 46 2.9 1
(BD349360) Moss genes from Physcomitrella patens encoding pr... 46 2.9 1
(AX794681) Sequence 257 from Patent WO03051917. 46 2.9 1
(AX794594) Sequence 170 from Patent WO03051917. 46 2.9 1
(AX154971) Sequence 17 from Patent WO0138484. 46 2.9 1
(AX150708) Sequence 49 from Patent WO0138541. 46 2.9 1
(AR508511) Sequence 13471 from patent US 6703491. 46 2.9 1
(Z75313) B.taurus gene for androgen receptor (exon 1). 46 2.9 1
(L47975) Equus caballus TATA-box binding protein (TBP) gene,... 46 2.9 1
(AY834772) Bos taurus calpastatin (CAST) gene, exons 15 thro... 46 2.9 1
(AC151747) Ornithorhynchus anatinus chromosome UNK clone OAB... 46 2.9 1
(DQ145255) Drosophila miranda neo-Y psq gene, partial sequence. 46 2.9 1
(BT001340) Drosophila melanogaster AT22221 full insert cDNA. 46 2.9 1
(AY121663) Drosophila melanogaster RE10833 full insert cDNA. 46 2.9 1
(AY095516) Drosophila melanogaster GH13857 full insert cDNA. 46 2.9 1
(AY060815) Drosophila melanogaster GH28601 full length cDNA. 46 2.9 1
(AM502244) Leishmania infantum chromosome 26. 46 2.9 1
(AL009146) Drosophila melanogaster cosmid 17A9. 46 2.9 1
(AC107326) Drosophila melanogaster X BAC RP98-33A8 (Roswell ... 46 2.9 1
(AC104605) Drosophila melanogaster X BAC RP98-11C13 (Roswell... 46 2.9 1
(AC091202) Drosophila melanogaster 3L BAC RP98-30A3 (Roswell... 46 2.9 1
(AC010671) Drosophila melanogaster, chromosome X, region 18E... 46 2.9 1
(AC010055) Drosophila melanogaster 3L BAC RP98-24H3 (Roswell... 46 2.9 1
(AC010017) Drosophila melanogaster 3L BAC RP98-2C22 (Roswell... 46 2.9 1
(AC009389) Drosophila melanogaster, chromosome 3R, region 98... 46 2.9 1
(AC009388) Drosophila melanogaster clone BACR11P22, complete... 46 2.9 1
(AC008347) Drosophila melanogaster, chromosome 2R, region 57... 46 2.9 1
(AC008331) Drosophila melanogaster, chromosome 2L, region 29... 46 2.9 1
(AC008229) Drosophila melanogaster, chromosome 2R, region 51... 46 2.9 1
(AC004767) Drosophila melanogaster DNA sequence (P1s DS01986... 46 2.9 1
(AB170026) Moina macrocopa Ubx, Antp mRNA for Ultrabithorax,... 46 2.9 1
(L10379) Human (clone CTG-B45d) mRNA sequence. 46 2.9 1
(L10378) Human (clone CTG-B43a) mRNA sequence. 46 2.9 1
(EF036502) Homo sapiens THAP domain-containing protein 11 mR... 46 2.9 1
(BC012182) Homo sapiens THAP domain containing 11, mRNA (cDN... 46 2.9 1
(AL139234) Human DNA sequence from clone RP3-438D16 on chrom... 46 2.9 1
(AL139216) Human DNA sequence from clone RP5-1017J17 on chro... 46 2.9 1
(AL021153) Human DNA sequence from clone CTA-503F6 on chromo... 46 2.9 1
(AK289367) Homo sapiens cDNA FLJ76985 complete cds, highly s... 46 2.9 1
(AK127011) Homo sapiens cDNA FLJ45067 fis, clone BRAWH3024989. 46 2.9 1
(AC046134) Homo sapiens 3 BAC RP11-553K23 (Roswell Park Canc... 46 2.9 1
(AC040162) Homo sapiens chromosome 16 clone CTC-479C5, compl... 46 2.9 1
(AC008462) Homo sapiens chromosome 5 clone CTC-352J10, compl... 46 2.9 1
(AC158429) Ornithorhynchus anatinus clone OA_Bb-39B24, WORKI... 46 2.9 1
(AC157195) Bos taurus clone CH240-63I3, WORKING DRAFT SEQUEN... 46 2.9 1
(AC156483) Bos taurus clone CH240-49H15, WORKING DRAFT SEQUE... 46 2.9 1
(AC154065) Ornithorhynchus anatinus clone OA_Bb-426A17, WORK... 46 2.9 1
(AC148502) Callithrix jacchus clone CH259-370K21, WORKING DR... 46 2.9 1
(AC140161) Rattus norvegicus clone CH230-335K22, WORKING DRA... 46 2.9 1
(AC130857) Rattus norvegicus clone CH230-16J8, *** SEQUENCIN... 46 2.9 1
(AC126092) Rattus norvegicus clone CH230-188K15, WORKING DRA... 46 2.9 1
(AC125678) Rattus norvegicus clone CH230-427G3, WORKING DRAF... 46 2.9 1
(AC123335) Rattus norvegicus clone CH230-325L12, *** SEQUENC... 46 2.9 1
(AC118574) Lemur catta clone LB2-277C3, WORKING DRAFT SEQUEN... 46 2.9 1
(AC113649) Rattus norvegicus clone CH230-359P22, WORKING DRA... 46 2.9 1
(AC111981) Rattus norvegicus clone CH230-121G8, WORKING DRAF... 46 2.9 1
(AC110141) Rattus norvegicus clone CH230-242K20, *** SEQUENC... 46 2.9 1
(AC109972) Rattus norvegicus clone CH230-315N6, *** SEQUENCI... 46 2.9 1
(AC106387) Rattus norvegicus clone CH230-136N2, *** SEQUENCI... 46 2.9 1

>(AC114263) Dictyostelium discoideum chromosome 2 map 215673-367476 strain
AX4, complete sequence.
Length = 151802

Score = 587 bits (296), Expect(6) = 0.0
Identities = 298/299 (99%)
Strand = Plus / Plus


Query: 491 agttaaagaggagcaagctaaaagtaatgatgtcattattganccacaagtttttacaga 550
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 111145 agttaaagaggagcaagctaaaagtaatgatgtcattattgaaccacaagtttttacaga 111204


Query: 551 tggtaaaggtgaaaaggttgttattgaaggtgatctttcaaccttttacatctacactat 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111205 tggtaaaggtgaaaaggttgttattgaaggtgatctttcaaccttttacatctacactat 111264


Query: 611 tttctctgcattatttgttggtaccattggtattgcaattgcaaaattaatttcagattg 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111265 tttctctgcattatttgttggtaccattggtattgcaattgcaaaattaatttcagattg 111324


Query: 671 gagaaatagtgcaactggtgtacttggtattcaacaatttgatttcgttttattgattca 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111325 gagaaatagtgcaactggtgtacttggtattcaacaatttgatttcgttttattgattca 111384


Query: 731 agatatttattttggtgatttaaaacctgcaatggaagttggtaataaagaattcaatg 789
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111385 agatatttattttggtgatttaaaacctgcaatggaagttggtaataaagaattcaatg 111443

Score = 450 bits (227), Expect(6) = 0.0
Identities = 248/255 (97%)
Strand = Plus / Plus


Query: 828 attaaacatgcaacacttggtgatacaattacattaattattccaattttacaaaagaaa 887
||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 111599 attaaccatgcaacacttggtgatccaattccattaattattccaattttacaaaagaaa 111658


Query: 888 acaaatgcaagattaggacatgtaaatgttgatttttgcaaagaaggtaatgaaatgacc 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111659 acaaatgcaagattaggacatgtaaatgttgatttttgcaaagaaggtaatgaaatgacc 111718


Query: 948 attcaaaatttctatatcaatgcaatcaatggttatgtttatgaccttccagcaccaaaa 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111719 attcaaaatttctatatcaatgcaatcaatggttatgtttatgaccttccagcaccaaaa 111778


Query: 1008 cataagattgacacaacaaaagaaagatacagtggtaaatattcattagaagaattattg 1067
|||||||||| | || |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 111779 cataagattgccccaccaaaagaaagatccagtggtaaatattcattagaagaattattg 111838


Query: 1068 gctgatccaacactt 1082
|||||||||||||||
Sbjct: 111839 gctgatccaacactt 111853

Score = 448 bits (226), Expect(6) = 0.0
Identities = 226/226 (100%)
Strand = Plus / Plus


Query: 1 tttaacaactattttaaaacaaggttttaagtttagcaattcacaatcaaatcaaattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110617 tttaacaactattttaaaacaaggttttaagtttagcaattcacaatcaaatcaaattat 110676


Query: 61 tagatcatattcaaaaggtttactattgggtcaaaatggtttcgattttaataatagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110677 tagatcatattcaaaaggtttactattgggtcaaaatggtttcgattttaataatagaaa 110736


Query: 121 taaacaaattatttcgttttcatcattaaataattgtaaaaatattaaaggtttatcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110737 taaacaaattatttcgttttcatcattaaataattgtaaaaatattaaaggtttatcatt 110796


Query: 181 ttttagaataacaagacaattttcatcatcaaatacaccaaccaaa 226
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110797 ttttagaataacaagacaattttcatcatcaaatacaccaaccaaa 110842

Score = 161 bits (81), Expect(6) = 0.0
Identities = 81/81 (100%)
Strand = Plus / Plus


Query: 352 ttcatcagaggaagcttcatcattaagaaataaaagaaaagataaacttgcaggtatgtt 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110968 ttcatcagaggaagcttcatcattaagaaataaaagaaaagataaacttgcaggtatgtt 111027


Query: 412 taataaacctaaagaacctgt 432
|||||||||||||||||||||
Sbjct: 111028 taataaacctaaagaacctgt 111048

Score = 81.8 bits (41), Expect(6) = 0.0
Identities = 41/41 (100%)
Strand = Plus / Plus


Query: 440 gaagaggaggcagcagcagcaacagcagcatcagaacaaga 480
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 111056 gaagaggaggcagcagcagcaacagcagcatcagaacaaga 111096

Score = 50.1 bits (25), Expect(6) = 0.0
Identities = 25/25 (100%)
Strand = Plus / Plus


Query: 803 gaattacttttttgatgaagctaat 827
|||||||||||||||||||||||||
Sbjct: 111457 gaattacttttttgatgaagctaat 111481

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,390,130,139
Number of extensions: 95500312
Number of successful extensions: 9716137
Number of sequences better than 10.0: 1048
Length of query: 1158
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1134
Effective length of database: 96,409,374,237
Effective search space: 109328230384758
Effective search space used: 109328230384758
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.20
Homology vs Protein
Query= Contig-U15993-1 (Contig-U15993-1Q) /CSM_Contig/Contig-U15993-1Q.Seq.d
(1158 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC114263_39(AC114263|pid:none) Dictyostelium discoideum chromoso... 376 e-144
CP000393_1814(CP000393|pid:none) Trichodesmium erythraeum IMS101... 35 5.1
AM285328_3(AM285328|pid:none) Spiroplasma citri GII3-3X chromoso... 35 6.6

>AC114263_39(AC114263|pid:none) Dictyostelium discoideum chromosome 2
map 215673-367476 strain AX4, complete sequence.
Length = 381

Score = 376 bits (965), Expect(2) = e-144
Identities = 189/197 (95%), Positives = 189/197 (95%)
Frame = +3

Query: 492 VKEEQAKSNDVIIXPQVFTDGKGEKVVIEGDLSTFYIYTIFSALFVGTIGIAIAKLISDW 671
VKEEQAKSNDVII PQVFTDGKGEKVVIEGDLSTFYIYTIFSALFVGTIGIAIAKLISDW
Sbjct: 185 VKEEQAKSNDVIIEPQVFTDGKGEKVVIEGDLSTFYIYTIFSALFVGTIGIAIAKLISDW 244

Query: 672 RNSATGVLGIQQFDFVLLIQDIYFGDLKPAMEVGNKEFNEKTKKNYFFDEANIKHATLGD 851
RNSATGVLGIQQFDFVLLIQDIYFGDLKPAMEVGNKEFNEKTKKNYFFDEANI HATLGD
Sbjct: 245 RNSATGVLGIQQFDFVLLIQDIYFGDLKPAMEVGNKEFNEKTKKNYFFDEANINHATLGD 304

Query: 852 TITLIIPILQKKTNARLGHVNVDFCKEGNEMTIQNFYINAINGYVYDLPAPKHKIDTTKE 1031
I LIIPILQKKTNARLGHVNVDFCKEGNEMTIQNFYINAINGYVYDLPAPKHKI KE
Sbjct: 305 PIPLIIPILQKKTNARLGHVNVDFCKEGNEMTIQNFYINAINGYVYDLPAPKHKIAPPKE 364

Query: 1032 RYSGKYSLEELLADPTL 1082
R SGKYSLEELLADPTL
Sbjct: 365 RSSGKYSLEELLADPTL 381

Score = 159 bits (403), Expect(2) = e-144
Identities = 89/138 (64%), Positives = 89/138 (64%)
Frame = +2

Query: 2 LTTILKQGFKFSNSQSNQIIRSYSKGLLLGQNGFDFNNRNKQIISFSSLNNCKNIKGLSF 181
LTTILKQGFKFSNSQSNQIIRSYSKGLLLGQNGFDFNNRNKQIISFSSLNNCKNIKGLSF
Sbjct: 9 LTTILKQGFKFSNSQSNQIIRSYSKGLLLGQNGFDFNNRNKQIISFSSLNNCKNIKGLSF 68

Query: 182 FRITRQFSSSNTPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXX 361
FRITRQFSSSNTPT L
Sbjct: 69 FRITRQFSSSNTPTKNNNNNNNNNDNDNNNDNNNNENKNENEGEGEKDENKLEEVEISSE 128

Query: 362 XXXXLRNKRKDKLAGMFN 415
LRNKRKDKLAGMFN
Sbjct: 129 EASSLRNKRKDKLAGMFN 146

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,355,337,131
Number of extensions: 22565152
Number of successful extensions: 62326
Number of sequences better than 10.0: 3
Number of HSP's gapped: 62301
Number of HSP's successfully gapped: 5
Length of query: 386
Length of database: 1,051,180,864
Length adjustment: 130
Effective length of query: 256
Effective length of database: 630,428,194
Effective search space: 161389617664
Effective search space used: 161389617664
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.65 gvh: 0.36 alm: 0.28 top: 0.73 tms: 0.07 mit: 0.34 mip: 0.04
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.06 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 1.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

48.0 %: nuclear
28.0 %: cytoplasmic
12.0 %: mitochondrial
8.0 %: Golgi
4.0 %: vesicles of secretory system

>> prediction for Contig-U15993-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 0