Contig-U15988-1
Contig ID Contig-U15988-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15988-1 (Contig-U15988-1Q) /CSM_Contig/Contig-U15988-1Q.Seq.d
ATTTCTCTGACCAATTTCACATTCTCATTATTATCAGATACAACAAATAT
TACTATAGTAATACCTCAACAACAGCAACAACAACAAGTTTATCAAGTTT
AAATTCCATTGGAATTATTTTAAAAAAAAAAAACAAATAAAATTTCTTTT
TTATTTTTTATTTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------
-TTATTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAACAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAA

Gap gap included
Contig length 418
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 111181
End point 110836
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 2
Link to clone list U15988
List of clone(s)

est1=FC-AT02F,1,241
est2=FC-AT02Z,242,418
Translated Amino Acid sequence
fl*pishshyyqiqqill**YLNNSNNNKFIKFKFHWNYFKKKKQIKFLFYFLFIKKKKK
KKKKKKKKKKKKKKKKKKKK---

---LFFFFFFFFFKNKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
KK


Translated Amino Acid sequence (All Frames)
Frame A:
isltnftfsllsdttnitivipqqqqqqqvyqv*iplelf*kkktnkisflffiy*kkkk
kkkkkkkkkkkkkkkkkkkk---

---LFFFFFFFFFKNKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
KK

Frame B:
fl*pishshyyqiqqill**YLNNSNNNKFIKFKFHWNYFKKKKQIKFLFYFLFIKKKKK
KKKKKKKKKKKKKKKKKKKK---

---yfffffffflktkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkk
k

Frame C:
fsdqfhiliiirynkyyysntsttatttslsslnsigiilkkknk*nfffifyllkkkkk
kkkkkkkkkkkkkkkkkkk---

---iffffffff*kqkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkkk
k

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15988-1 (Contig-U15988-1Q)
/CSM_Contig/Contig-U15988-1Q.Seq.d
(428 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15988-1 (Contig-U15988-1Q) /CSM_Contig/Conti... 258 6e-69
Contig-U15592-1 (Contig-U15592-1Q) /CSM_Contig/Conti... 58 1e-08
Contig-U06780-1 (Contig-U06780-1Q) /CSM_Contig/Conti... 50 3e-06
Contig-U16221-1 (Contig-U16221-1Q) /CSM_Contig/Conti... 46 4e-05
Contig-U12275-1 (Contig-U12275-1Q) /CSM_Contig/Conti... 46 4e-05
Contig-U01273-1 (Contig-U01273-1Q) /CSM_Contig/Conti... 46 4e-05
Contig-U15883-1 (Contig-U15883-1Q) /CSM_Contig/Conti... 44 2e-04
Contig-U15351-1 (Contig-U15351-1Q) /CSM_Contig/Conti... 44 2e-04
Contig-U15056-1 (Contig-U15056-1Q) /CSM_Contig/Conti... 44 2e-04
Contig-U15036-1 (Contig-U15036-1Q) /CSM_Contig/Conti... 44 2e-04

>Contig-U15988-1 (Contig-U15988-1Q) /CSM_Contig/Contig-U15988-1Q.Seq.d
Length = 428

Score = 258 bits (130), Expect = 6e-69
Identities = 154/166 (92%)
Strand = Plus / Plus


Query: 1 atttctctgaccaatttcacattctcattattatcagatacaacaaatattactatagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttctctgaccaatttcacattctcattattatcagatacaacaaatattactatagta 60


Query: 61 atacctcaacaacagcaacaacaacaagtttatcaagtttaaattccattggaattattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atacctcaacaacagcaacaacaacaagtttatcaagtttaaattccattggaattattt 120


Query: 121 tnnnnnnnnnnnncaaataaaatttcttttttattttttatttatt 166
| |||||||||||||||||||||||||||||||||
Sbjct: 121 taaaaaaaaaaaacaaataaaatttcttttttattttttatttatt 166


Score = 32.2 bits (16), Expect = 0.66
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 48 tattactatagtaata 63
||||||||||||||||
Sbjct: 63 tattactatagtaata 48


>Contig-U15592-1 (Contig-U15592-1Q) /CSM_Contig/Contig-U15592-1Q.Seq.d
Length = 2376

Score = 58.0 bits (29), Expect = 1e-08
Identities = 32/33 (96%)
Strand = Plus / Plus


Query: 74 agcaacaacaacaagtttatcaagtttaaattc 106
|||| ||||||||||||||||||||||||||||
Sbjct: 2049 agcatcaacaacaagtttatcaagtttaaattc 2081


>Contig-U06780-1 (Contig-U06780-1Q) /CSM_Contig/Contig-U06780-1Q.Seq.d
Length = 508

Score = 50.1 bits (25), Expect = 3e-06
Identities = 25/25 (100%)
Strand = Plus / Plus


Query: 63 acctcaacaacagcaacaacaacaa 87
|||||||||||||||||||||||||
Sbjct: 148 acctcaacaacagcaacaacaacaa 172


Score = 30.2 bits (15), Expect = 2.6
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 69 acaacagcaacaacaacaa 87
|||||| ||||||||||||
Sbjct: 37 acaacaacaacaacaacaa 55


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 25,678
Number of Sequences: 8402
Number of extensions: 25678
Number of successful extensions: 11012
Number of sequences better than 10.0: 1705
length of query: 428
length of database: 8,075,542
effective HSP length: 16
effective length of query: 412
effective length of database: 7,941,110
effective search space: 3271737320
effective search space used: 3271737320
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 3. 7
Homology vs DNA
Query= Contig-U15988-1 (Contig-U15988-1Q) /CSM_Contig/Contig-U15988-1Q.Seq.d
(428 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(C24389) Dictyostelium discoideum gamete cDNA, clone FC-AT02. 232 8e-57 1
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 50 2e-05 2
(BJ401634) Dictyostelium discoideum cDNA clone:dds23l24, 3' ... 58 3e-04 1
(BJ342288) Dictyostelium discoideum cDNA clone:dda13e07, 3' ... 58 3e-04 1
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 40 0.003 2
(EB256355) CNSN01-C-002225-501 Normalized CNS library (juven... 36 0.014 2
(EB320025) CNSN01-F-085550-501 Normalized CNS library (juven... 36 0.014 2
(AC178830) Strongylocentrotus purpuratus clone R3-29F11, WOR... 52 0.017 1
(DY894493) CeleSEQ14075 Cunninghamella elegans pBluescript (... 52 0.017 1
(DY893256) CeleSEQ12543 Cunninghamella elegans pBluescript (... 52 0.017 1
(AM832905) Nicotiana tabacum EST, clone nt005151058. 52 0.017 1
(AB144629) Homo sapiens DNA, STS on chromosome 6, D6S0730i, ... 50 0.067 1
(DJ458183) Method for analysing genome using microsatellite ... 50 0.067 1
(DJ134115) Method for identification of useful proteins deri... 50 0.067 1
(AL391417) Human DNA sequence from clone RP11-15J23 on chrom... 50 0.067 1
(AC034126) Homo sapiens clone RP11-667H16, WORKING DRAFT SEQ... 50 0.067 1
(AZ926803) 476.dis11g08.s1 Saccharomyces castellii NRRL Y-12... 50 0.067 1
(EC724086) MJE00008150 Malawimonas jakobiformis Home made (1... 50 0.067 1
(AU266148) Dictyostelium discoideum vegetative cDNA clone:VS... 50 0.067 1
(DN315987) PL06022B1B01 cDNA from juvenile hermaphodites Sch... 50 0.067 1
(DN309705) PL06005A2H03 cDNA from juvenile hermaphodites Sch... 50 0.067 1
(CX711536) gmrtDrNS01_35-D_M13R_C02_012.s0 Water stressed gm... 50 0.067 1
(FF138430) CJAH-aae98d10.b1 Caenorhabditis_japonica_CJAH1_ES... 50 0.067 1
(FF130446) CJAH-aad84h09.b1 Caenorhabditis_japonica_CJAH1_ES... 50 0.067 1
(FF128052) CJAH-aad04e01.b1 Caenorhabditis_japonica_CJAH1_ES... 50 0.067 1
(FF128039) CJAH-aad04d01.b1 Caenorhabditis_japonica_CJAH1_ES... 50 0.067 1
(FF122163) CJAH-aac00e06.b1 Caenorhabditis_japonica_CJAH1_ES... 50 0.067 1
(FF113881) CJAH-aaa54g03.b2 Caenorhabditis_japonica_CJAH1_ES... 50 0.067 1
(FF111805) CJAH-aaa52b02.b2 Caenorhabditis_japonica_CJAH1_ES... 50 0.067 1
(AC095008) Rattus norvegicus clone CH230-6L2, WORKING DRAFT ... 42 0.090 3
(AC121139) Mus musculus chromosome 5, clone RP23-429G1, comp... 48 0.26 1
(AC118231) Mus musculus chromosome 5, clone RP23-462J24, com... 48 0.26 1
(AM270115) Aspergillus niger contig An06c0090, complete genome. 48 0.26 1
(AP003082) Homo sapiens genomic DNA, chromosome 11 clone:RP1... 48 0.26 1
(AP001274) Homo sapiens genomic DNA, chromosome 11 clone:RP1... 48 0.26 1
(AL451044) Human DNA sequence from clone RP11-293K19 on chro... 48 0.26 1
(AL358073) Human DNA sequence from clone RP11-458I7 on chrom... 48 0.26 1
(AC120574) Rattus norvegicus clone CH230-378I18, WORKING DRA... 48 0.26 1
(AC095187) Rattus norvegicus clone CH230-9C3, WORKING DRAFT ... 48 0.26 1
(FP085374) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.26 1
(CU915453) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.26 1
(CU595465) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.26 1
(AP010143) Lotus japonicus genomic DNA, clone: LjT38E08, TM0... 48 0.26 1
(AL391257) Human DNA sequence *** SEQUENCING CANCELLED *** f... 48 0.26 1
(AC180891) Strongylocentrotus purpuratus clone R3-3066P1, WO... 48 0.26 1
(AC177363) Strongylocentrotus purpuratus clone R3-1032D8, WO... 48 0.26 1
(AC022913) Homo sapiens chromosome 11 clone RP11-746C14 map ... 48 0.26 1
(AC022243) Homo sapiens clone RP11-15H9, WORKING DRAFT SEQUE... 48 0.26 1
(FH093595) CHO_OF3668xp10f1.ab1 CHO_OF3 Nicotiana tabacum ge... 48 0.26 1
(EB486965) 1099341202186 12-DrosW-norm-1P5Kb Drosophila will... 48 0.26 1
(AM831229) Nicotiana tabacum EST, clone nt002036038. 48 0.26 1
(EY761665) CR05-C1-100-043-A01-CT.F Mandarin leaf, greenhous... 48 0.26 1
(EY742191) CS00-C3-705-024-B02-CT.F Sweet orange fruit, deve... 48 0.26 1
(EY737046) CS00-C3-705-023-H06-CT.F Sweet orange fruit, deve... 48 0.26 1
(CP001173) Helicobacter pylori G27, complete genome. 48 0.26 1
(CP001072) Helicobacter pylori Shi470, complete genome. 48 0.26 1
(AC068523) Homo sapiens chromosome 18 clone RP11-620B7 map 1... 42 0.27 2
(AC127421) Mus musculus BAC clone RP24-314F1 from chromosome... 42 0.27 2
(AC092181) Homo sapiens 3 BAC RP11-735O9 (Roswell Park Cance... 42 0.29 2
(AC068734) Homo sapiens chromosome 12 clone RP11-485M4 map 1... 42 0.31 2
(AL807804) Mouse DNA sequence from clone RP23-134H12 on chro... 42 0.33 2
(AC116998) Mus musculus BAC clone RP23-16F6 from 18, complet... 42 0.34 2
(BX005196) Zebrafish DNA sequence from clone CH211-142M16 in... 34 0.57 2
(AC117246) Mus musculus BAC clone RP24-317G19 from 17, compl... 36 0.57 2
(AC091621) Papio anubis clone RP41-57J19, complete sequence. 44 0.63 2
(EY387461) CAXA6772.fwd CAXA Helobdella robusta Subtracted L... 36 0.74 2
(EY385129) CAXA5527.fwd CAXA Helobdella robusta Subtracted L... 36 0.74 2
(EY370236) CAXA12805.fwd CAXA Helobdella robusta Subtracted ... 36 0.74 2
(EY387895) CAXA7007.fwd CAXA Helobdella robusta Subtracted L... 36 0.74 2
(EY375738) CAXA15788.fwd CAXA Helobdella robusta Subtracted ... 36 0.74 2
(EY383146) CAXA4443.fwd CAXA Helobdella robusta Subtracted L... 36 0.75 2
(AY585349) Aegilops tauschii low molecular weight glutenin s... 42 0.87 2
(AC219827) Bos taurus clone CH240-320P16, WORKING DRAFT SEQU... 46 0.94 2
(AC005184) Homo sapiens Xp22 bins 45-47 BAC GSHB-665N22 (Gen... 40 0.94 2
(AC200714) Rhesus Macaque BAC CH250-310I22 () complete sequ... 40 0.94 2
(CU914255) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 0.96 2
(FP067389) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 1.0 2
(EU258200) Spodoptera frugiperda MNPV isolate 19, complete g... 46 1.0 1
(EF035042) Spodoptera frugiperda MNPV isolate 3AP2, complete... 46 1.0 1
(Z53007) H.sapiens (D2S2242) DNA segment containing (CA) rep... 46 1.0 1
(AB137144) Homo sapiens DNA, STS on chromosome 10, D10S0176i... 46 1.0 1
(AL772313) Mouse DNA sequence from clone RP23-128J10 on chro... 46 1.0 1
(AC130214) Mus musculus BAC clone RP23-245B21 from chromosom... 46 1.0 1
(AC124685) Mus musculus BAC clone RP24-385O22 from chromosom... 46 1.0 1
(CR759947) Gorilla DNA sequence from clone CH255-315F17. 46 1.0 1
(AC192136) Pan troglodytes BAC clone CH251-590L2 from chromo... 46 1.0 1
(AC159033) Pan troglodytes BAC clone CH251-339G2 from chromo... 46 1.0 1
(AC146276) Pan troglodytes BAC clone CH251-149B14 from X, co... 46 1.0 1
(AC144386) Pan troglodytes BAC clone CH251-313C12 from X, co... 46 1.0 1
(AC091530) Papio anubis clone RP41-444A14, complete sequence. 46 1.0 1
(CU914124) Medicago truncatula chromosome 5 clone mte1-78p15... 46 1.0 1
(CU469558) Medicago truncatula chromosome 5 clone mte1-71d2,... 46 1.0 1
(CT836836) Oryza sativa (indica cultivar-group) cDNA clone:O... 46 1.0 1
(CR382133) Debaryomyces hansenii strain CBS767 chromosome A ... 46 1.0 1
(CP000499) Pichia stipitis CBS 6054 chromosome 5, complete s... 46 1.0 1
(AY669789) Arabidopsis thaliana clone C105344 ARF7 (At5g2073... 46 1.0 1
(AY080595) Arabidopsis thaliana unknown protein (At5g20730) ... 46 1.0 1
(AY008392) Arabidopsis thaliana ARF7 (ARF7) gene, complete cds. 46 1.0 1
(AM270242) Aspergillus niger contig An11c0250, complete genome. 46 1.0 1
(AF296832) Arabidopsis thaliana BAC T1M15. 46 1.0 1
(AF186466) Arabidopsis thaliana non-phototropic hypocotyl 4 ... 46 1.0 1
(AF042195) Arabidopsis thaliana auxin response factor 7 (ARF... 46 1.0 1
(AF022368) Arabidopsis thaliana BIPOSTO (BIP) mRNA, complete... 46 1.0 1
(DJ463696) Method for analysing genome using microsatellite ... 46 1.0 1
(AX505548) Sequence 243 from Patent WO0216655. 46 1.0 1
(AX347784) Sequence 134 from Patent WO0196584. 46 1.0 1
(AR556565) Sequence 11696 from patent US 6747137. 46 1.0 1
(AR547349) Sequence 2480 from patent US 6747137. 46 1.0 1
(EF490817) Flaccisagitta enflata Hox8 mRNA, complete cds. 46 1.0 1
(AJ586737) Drosophila virilis partial mod(mdg4) gene. 46 1.0 1
(AC108521) Caenorhabditis briggsae cosmid CB004G08, complete... 46 1.0 1
(Z81367) Human DNA sequence from clone GHc-618H1 on chromoso... 46 1.0 1
(CU467002) Human DNA sequence from clone XXbac-535A19 on chr... 46 1.0 1
(CU024913) Human DNA sequence from clone XXbac-541D20 on chr... 46 1.0 1
(AP003475) Homo sapiens genomic DNA, chromosome 8q23, clone:... 46 1.0 1
(AL606463) Human DNA sequence from clone RP11-485D21 on chro... 46 1.0 1
(AL590069) Human DNA sequence from clone RP11-353J17 on chro... 46 1.0 1
(AL365501) Human DNA sequence from clone RP13-27G4 on chromo... 46 1.0 1
(AL355338) Human DNA sequence from clone RP11-12G12 on chrom... 46 1.0 1
(AL162388) Human DNA sequence from clone RP11-373A6 on chrom... 46 1.0 1
(AL121835) Human DNA sequence from clone RP4-570O12 on chrom... 46 1.0 1
(AL050343) Human DNA sequence from clone RP4-657D16 on chrom... 46 1.0 1
(AC097519) Homo sapiens BAC clone RP11-549K7 from 4, complet... 46 1.0 1
(AC096772) Homo sapiens BAC clone RP11-801F7 from 2, complet... 46 1.0 1
(AC093656) Homo sapiens BAC clone RP11-440N4 from 4, complet... 46 1.0 1
(AC022325) Homo sapiens BAC clone RP11-391J13 from 4, comple... 46 1.0 1
(AC021937) Homo sapiens chromosome 8, clone RP11-812B1, comp... 46 1.0 1
(AC019198) Homo sapiens BAC clone RP11-369J6 from 2, complet... 46 1.0 1
(AC018735) Homo sapiens BAC clone RP11-372A6 from 2, complet... 46 1.0 1
(AC008746) Homo sapiens chromosome 19 clone CTD-2587H19, com... 46 1.0 1
(AC156821) Bos taurus clone CH240-60M1, WORKING DRAFT SEQUEN... 46 1.0 1
(AC153324) Lemur catta clone LB2-199D12, WORKING DRAFT SEQUE... 46 1.0 1
(AC149831) Zea mays clone ZMMBBc0408K22, *** SEQUENCING IN P... 46 1.0 1
(AC149829) Zea mays clone ZMMBBc0256O12, *** SEQUENCING IN P... 46 1.0 1
(AC147485) Otolemur garnettii clone CH256-149H24, WORKING DR... 46 1.0 1
(AC133723) Rattus norvegicus clone CH230-107H7, *** SEQUENCI... 46 1.0 1
(AC132792) Rattus norvegicus clone CH230-234G1, *** SEQUENCI... 46 1.0 1
(AC121374) Rattus norvegicus clone CH230-109F20, WORKING DRA... 46 1.0 1
(AC105597) Rattus norvegicus clone CH230-125P15, *** SEQUENC... 46 1.0 1
(AC097817) Rattus norvegicus clone CH230-58E21, WORKING DRAF... 46 1.0 1
(CU407214) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.0 1
(CT967322) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.0 1
(AP000895) Homo sapiens genomic DNA, chromosome 18p11.3 clon... 46 1.0 1
(AL359372) Human DNA sequence *** SEQUENCING CANCELLED *** f... 46 1.0 1
(AL138896) Human DNA sequence *** SEQUENCING CANCELLED *** f... 46 1.0 1
(AC218984) Zea mays chromosome 1 clone CH201-98P12; ZMMBBc00... 46 1.0 1
(AC212771) Zea mays chromosome 9 clone CH201-451O18; ZMMBBc0... 46 1.0 1
(AC212401) Zea mays chromosome 2 clone ZMMBBb-33E7; ZMMBBb00... 46 1.0 1
(AC211679) Zea mays chromosome 9 clone CH201-466F18; ZMMBBc0... 46 1.0 1
(AC211518) Zea mays chromosome 2 clone ZMMBBb-309H11; ZMMBBb... 46 1.0 1
(AC211327) Zea mays chromosome 5 clone CH201-71I3; ZMMBBc007... 46 1.0 1
(AC211137) Zea mays chromosome 6 clone CH201-140D23; ZMMBBc0... 46 1.0 1
(AC210998) Zea mays chromosome 10 clone ZMMBBb-583M5; ZMMBBb... 46 1.0 1
(AC210611) Zea mays chromosome 2 clone CH201-538E21; ZMMBBc0... 46 1.0 1
(AC209409) Zea mays chromosome 2 clone ZMMBBb-638P8; ZMMBBb0... 46 1.0 1
(AC209382) Zea mays chromosome 3 clone CH201-285O1; ZMMBBc02... 46 1.0 1
(AC207683) Zea mays chromosome 10 clone CH201-523K3; ZMMBBc0... 46 1.0 1
(AC205947) Canis lupus familiaris clone XX-257P5, *** SEQUEN... 46 1.0 1
(AC204721) Zea mays chromosome 5 clone CH201-105A21; ZMMBBc0... 46 1.0 1
(AC204077) Macaca mulatta clone CH250-435A24, WORKING DRAFT ... 46 1.0 1
(AC203463) Myotis lucifugus clone CH235-471A13, WORKING DRAF... 46 1.0 1
(AC200112) Zea mays chromosome 10 clone CH201-430E20; ZMMBBc... 46 1.0 1
(AC199382) Zea mays chromosome 10 clone CH201-42L21; ZMMBBc0... 46 1.0 1
(AC198775) Zea mays chromosome 10 clone CH201-324O7; ZMMBBc0... 46 1.0 1
(AC198540) Myotis lucifugus clone CH235-247B10, WORKING DRAF... 46 1.0 1
(AC198291) Zea mays chromosome unknown clone CH201-213E15; Z... 46 1.0 1
(AC196310) Myotis lucifugus clone CH235-191B11, WORKING DRAF... 46 1.0 1
(AC195639) Pan troglodytes chromosome 9 clone CH251-433G7, W... 46 1.0 1
(AC194533) Pan troglodytes chromosome 9 clone CH251-674H9, W... 46 1.0 1
(AC193472) Zea mays chromosome 3 clone CH201-373N18; ZMMBBc0... 46 1.0 1
(AC190535) Zea mays chromosome 9 clone ZMMBBb-614K9; ZMMBBb0... 46 1.0 1
(AC187482) Zea mays chromosome unknown clone ZMMBBb-136P19; ... 46 1.0 1
(AC184945) Bos taurus clone CH240-301I14, WORKING DRAFT SEQU... 46 1.0 1
(AC184859) Zea mays chromosome 5 clone CH201-194C17; ZMMBBc0... 46 1.0 1
(AC179415) Strongylocentrotus purpuratus clone R3-62C24, WOR... 46 1.0 1
(AC178410) Strongylocentrotus purpuratus clone R3-3112L13, W... 46 1.0 1
(AC169973) Bos taurus clone CH240-231H21, WORKING DRAFT SEQU... 46 1.0 1
(AC169617) Bos taurus clone CH240-211J23, WORKING DRAFT SEQU... 46 1.0 1
(AC164896) Bos taurus clone CH240-160M5, WORKING DRAFT SEQUE... 46 1.0 1
(AC016242) Homo sapiens clone RP11-28C12, WORKING DRAFT SEQU... 46 1.0 1
(ET922474) CHO_OF216xi16r1.ab1 CHO_OF Nicotiana tabacum geno... 46 1.0 1
(ET922397) CHO_OF216xi16f1.ab1 CHO_OF Nicotiana tabacum geno... 46 1.0 1
(ER538481) 1093015887792 Global-Ocean-Sampling_GS-35-01-01-1... 46 1.0 1
(AM677006) Entamoeba terrapinae GSS, clone terra125c10.q1k. 46 1.0 1
(ED242371) AUAC-aan55h06.b1 Ascaris suum whole genome shotgu... 46 1.0 1
(ED203307) AUAC-aba38f07.g1 Ascaris suum whole genome shotgu... 46 1.0 1
(ED104450) AUAC-aau58c07.g1 Ascaris suum whole genome shotgu... 46 1.0 1
(AL440016) T3 end of clone BD0AA009D08 of library BD0AA from... 46 1.0 1
(DH468764) Monosiga ovata DNA, fosmid clone: MOF-012L07, gen... 46 1.0 1
(CZ293013) cp84f07.f Candida parapsilosis Random Genomic Lib... 46 1.0 1
(CZ290857) cp72d01.r Candida parapsilosis Random Genomic Lib... 46 1.0 1
(AG751746) Macaca fuscata fuscata DNA, clone: MSB2-217D16_F,... 46 1.0 1
(AG644520) Macaca fuscata fuscata DNA, clone: MSB2-055D11_F,... 46 1.0 1
(CC816050) ZMMBBc0481J02f ZMMBBc Zea mays subsp. mays genomi... 46 1.0 1
(CC488734) CH240_320P16.T7 CHORI-240 Bos taurus genomic clon... 46 1.0 1
(B80324) CIT-HSP-2045F17.TR CIT-HSP Homo sapiens genomic clo... 46 1.0 1
(AG164710) Pan troglodytes DNA, clone: RP43-031P07.TJ. 46 1.0 1
(AG112906) Pan troglodytes DNA, clone: PTB-119G01.R. 46 1.0 1
(EH010330) USDA-FP_183439 Lysiphlebus testaceipes adult whol... 46 1.0 1
(EE464097) BNSCS2CT_UP_023_B10_06JAN2005_078 Brassica napus ... 46 1.0 1
(EC855134) HDE00001192 Hyperamoeba dachnaya Non-normalized (... 46 1.0 1
(EB604759) AGENCOURT_56960021 D. grimshawi EST Drosophila gr... 46 1.0 1
(EB575457) AGENCOURT_51101609 D. virilis EST Drosophila viri... 46 1.0 1
(EB575226) AGENCOURT_51109963 D. virilis EST Drosophila viri... 46 1.0 1
(EB572675) AGENCOURT_51868099 D. virilis EST Drosophila viri... 46 1.0 1
(EB572654) AGENCOURT_51787046 D. virilis EST Drosophila viri... 46 1.0 1
(EB571384) AGENCOURT_51102805 D. virilis EST Drosophila viri... 46 1.0 1
(EB569969) AGENCOURT_51959546 D. virilis EST Drosophila viri... 46 1.0 1
(EB568999) AGENCOURT_51183324 D. virilis EST Drosophila viri... 46 1.0 1
(EB568997) AGENCOURT_51101716 D. virilis EST Drosophila viri... 46 1.0 1
(EB568793) AGENCOURT_51105087 D. virilis EST Drosophila viri... 46 1.0 1
(EB567313) AGENCOURT_51360354 D. virilis EST Drosophila viri... 46 1.0 1
(EB566998) AGENCOURT_51868205 D. virilis EST Drosophila viri... 46 1.0 1
(EB566678) AGENCOURT_51183420 D. virilis EST Drosophila viri... 46 1.0 1
(EB560466) AGENCOURT_51900123 D. virilis EST Drosophila viri... 46 1.0 1
(EB558501) AGENCOURT_51875934 D. virilis EST Drosophila viri... 46 1.0 1
(EB557593) AGENCOURT_51104542 D. virilis EST Drosophila viri... 46 1.0 1
(EB556279) AGENCOURT_51782685 D. virilis EST Drosophila viri... 46 1.0 1
(EB555938) AGENCOURT_51368795 D. virilis EST Drosophila viri... 46 1.0 1
(EB555698) AGENCOURT_51362774 D. virilis EST Drosophila viri... 46 1.0 1
(EB553847) AGENCOURT_51193288 D. virilis EST Drosophila viri... 46 1.0 1
(EB500243) 1099435290856 12-DrosW-norm-1P5Kb Drosophila will... 46 1.0 1
(EB497588) 1099435214834 12-DrosW-norm-1P5Kb Drosophila will... 46 1.0 1
(EB453475) 1099341207577 12-DrosW-std-1P6Kb Drosophila willi... 46 1.0 1
(EB211275) PEG002-C-005791-501 Normalized Pedal-Pleural Gang... 46 1.0 1
(EB090741) EST53173 Larval Stage 1 Aedes aegypti cDNA clone ... 46 1.0 1
(DY893513) CeleSEQ12867 Cunninghamella elegans pBluescript (... 46 1.0 1
(DW431795) HHAGE030525 Human liver regeneration after partia... 46 1.0 1
(DW431552) HHAGE030282 Human liver regeneration after partia... 46 1.0 1
(DW225882) GH_HYPT_01-01-14R_D01_InvR_22Apr04_009_F Stem - 3... 46 1.0 1
(DW221725) EST37983 Larval Stage 1 Aedes aegypti cDNA clone ... 46 1.0 1
(DB061520) Homo sapiens cDNA clone TESTI4001401, 5' end, mRN... 46 1.0 1
(AU072465) Dictyostelium discoideum slug cDNA, clone SSE617. 46 1.0 1
(AU039534) Dictyostelium discoideum slug cDNA, clone SLE710. 46 1.0 1
(CT852602) Oryza sativa Indica Group EST sequence:OSIGCRA105... 46 1.0 1
(CO498446) G.h.fbr-sw07836 G.h.fbr-sw Gossypium hirsutum cDN... 46 1.0 1
(CK632894) AM2-AP0010-131201-022-C02_1 AP0010 Apis mellifera... 46 1.0 1
(CK630345) AM0-AE0008-050602-021-H09 AE0008 Apis mellifera c... 46 1.0 1
(CD244482) AGENCOURT_14098688 NIH_MGC_180 Homo sapiens cDNA ... 46 1.0 1
(CD063927) MA1-0036P-V023-B08-U.B MA1-0036 Schistosoma manso... 46 1.0 1
(C89868) Dictyostelium discoideum slug cDNA, clone SSG556. 46 1.0 1
(C89794) Dictyostelium discoideum slug cDNA, clone SSG854. 46 1.0 1
(C84764) Dictyostelium discoideum slug cDNA, clone SSF551. 46 1.0 1
(BU644492) mgmk020xN04f.b pmk1 in pBluescriptII sk(-) plasmi... 46 1.0 1
(BJ444872) Dictyostelium discoideum cDNA clone:ddv57o16, 3' ... 46 1.0 1
(BJ437961) Dictyostelium discoideum cDNA clone:ddv35m21, 3' ... 46 1.0 1
(BJ437042) Dictyostelium discoideum cDNA clone:ddv33c05, 3' ... 46 1.0 1
(BJ341975) Dictyostelium discoideum cDNA clone:dda9a03, 3' e... 46 1.0 1
(W43744) 23121 CD4-16 Arabidopsis thaliana cDNA clone H4F1T7... 46 1.0 1
(AW829872) ra46e01.y1 Bird-Rao Meloidogyne incognita J2 Melo... 46 1.0 1
(EY332831) CAWY5212.fwd CAWY Helobdella robusta Subtracted E... 46 1.0 1
(EY293504) CAWX11163.fwd CAWX Helobdella robusta Primary Ear... 46 1.0 1
(AC120892) Rattus norvegicus clone CH230-180P23, *** SEQUENC... 42 1.2 2
(CU928337) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 1.2 2
(CU466458) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 1.3 2
(GE358911) 292278603 Nasonia vitripennis Male Pupae Nasonia ... 40 1.3 2
(GE371384) 292304868 Nasonia vitripennis Male Pupae Nasonia ... 40 1.3 2
(AC111891) Rattus norvegicus clone CH230-50N10, *** SEQUENCI... 42 1.6 2
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 34 2.0 2
(CU151884) Zebrafish DNA sequence from clone CH211-196H1. 34 2.1 2
(CT027983) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 2.1 2
(BX511129) Zebrafish DNA sequence from clone RP71-68N21 in l... 34 2.1 2
(AC193359) Zea mays chromosome 5 clone ZMMBBb-603A24; ZMMBBb... 34 2.1 2
(AC183811) Zea mays chromosome 5 clone ZMMBBb-536N9; ZMMBBb0... 34 2.1 2
(AC177567) Strongylocentrotus purpuratus clone R3-1026E7, WO... 44 2.3 3
(AC111890) Rattus norvegicus clone CH230-50J3, *** SEQUENCIN... 42 2.5 2
(AC160708) Bos taurus clone CH240-92B18, WORKING DRAFT SEQUE... 40 2.5 3
(BZ812454) PUFDX30TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 34 2.8 2
(BZ680087) PUBJC05TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 34 2.8 2
(CG129292) PUJAH21TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 34 2.8 2
(AY618560) Thinopyrum elongatum low molecular weight gluteni... 34 2.8 2
(FE671294) mh1_0004_A12 Drought-stressed chickpea leave libr... 32 2.8 2
(FE670431) mh2_0028_B10 Chickpea leave library Cicer arietin... 32 2.8 2
(BJ391587) Dictyostelium discoideum cDNA clone:dds24a14, 5' ... 34 2.9 2
(AC114485) Homo sapiens chromosome 1 clone RP11-202K23, comp... 40 3.1 2
(FP016163) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 3.4 2
(AC131014) Rattus norvegicus clone CH230-237D20, *** SEQUENC... 42 3.4 3
(AM053677) Epidinium ecaudatum EST, clone Eec07_H05. 40 3.5 2
(AC113565) Canis lupus familiaris clone RP81-165F16, WORKING... 40 3.8 2
(AC019312) Homo sapiens clone RP11-119J17, WORKING DRAFT SEQ... 40 3.8 2
(AC023743) Drosophila melanogaster X BAC RP98-40O10 (Roswell... 42 3.9 2
(BX324161) Mouse DNA sequence from clone RP23-385D8 on chrom... 42 4.1 2
(CU570897) Zebrafish DNA sequence from clone DKEY-228B20 in ... 44 4.1 1
(CR354401) Zebrafish DNA sequence from clone CH211-101C7 in ... 44 4.1 1
(CR293518) Zebrafish DNA sequence from clone CH211-129L10 in... 44 4.1 1
(BX005397) Zebrafish DNA sequence from clone CH211-270B18 in... 44 4.1 1
(AL928941) Zebrafish DNA sequence from clone CH211-236L14 in... 44 4.1 1
(AL773593) Zebrafish DNA sequence from clone CH211-202N20 in... 44 4.1 1
(AC188192) Taeniopygia guttata BAC clone TGMCBa-5H12 from ch... 44 4.1 1
(AC096845) Takifugu rubripes clone 214J14, complete sequence. 44 4.1 1
(U09092) Simian immunodeficiency virus clone M87004wk170 PBw... 44 4.1 1
(L04415) Simian immunodeficiency virus (V1-20) proviral DNA ... 44 4.1 1
(BK003821) TPA_inf: Drosophila melanogaster HDC06510 (HDC065... 44 4.1 1
(DQ332019) Synthetic construct Saccharomyces cerevisiae clon... 44 4.1 1
(BV366330) S231P6576RF10.T0 BedlingtonTerrier Canis familiar... 44 4.1 1
(CU467017) Mouse DNA sequence from clone CH29-97M19 on chrom... 44 4.1 1
(CU041228) Mouse DNA sequence from clone RP23-276N16 on chro... 44 4.1 1
(BX072552) Mouse DNA sequence from clone RP23-147I24 on chro... 44 4.1 1
(BC075659) Mus musculus cDNA clone IMAGE:30607091, partial cds. 44 4.1 1
(AL840628) Mouse DNA sequence from clone RP23-311O2 on chrom... 44 4.1 1
(AL807734) Mouse DNA sequence from clone RP23-303N21 on chro... 44 4.1 1
(AL683816) Mouse DNA sequence from clone RP23-120E8 on chrom... 44 4.1 1
(AL669823) Mouse DNA sequence from clone RP23-456O1 on chrom... 44 4.1 1
(AL645911) Mouse DNA sequence from clone RP23-25M3 on chromo... 44 4.1 1
(AC170805) Mus musculus BAC clone RP24-363B14 from chromosom... 44 4.1 1
(AC167164) Mus musculus chromosome 7, clone RP24-276M8, comp... 44 4.1 1
(AC165280) Mus musculus chromosome 3, clone RP23-389C4, comp... 44 4.1 1
(AC163644) Mus musculus BAC clone RP24-394I24 from chromosom... 44 4.1 1
(AC159994) Mus musculus chromosome 7, clone RP23-368F23, com... 44 4.1 1
(AC158983) Mus musculus BAC clone RP23-264L8 from chromosome... 44 4.1 1
(AC158939) Mus musculus chromosome 5, clone RP23-204A8, comp... 44 4.1 1
(AC157786) Mus musculus chromosome 1, clone RP23-280O23, com... 44 4.1 1
(AC154689) Mus musculus BAC clone RP24-329P8 from chromosome... 44 4.1 1
(AC153600) Mus musculus 6 BAC RP23-380C10 (Roswell Park Canc... 44 4.1 1
(AC153597) Mus musculus 6 BAC RP23-18K9 (Roswell Park Cancer... 44 4.1 1
(AC140260) Mus musculus BAC clone RP23-311O16 from 6, comple... 44 4.1 1
(AC135409) Rattus norvegicus 8 BAC CH230-416D7 (Children's H... 44 4.1 1
(AC132378) Mus musculus BAC clone RP23-407N22 from chromosom... 44 4.1 1
(AC130693) Mus musculus chromosome 19, clone RP23-385G14, co... 44 4.1 1
(AC129777) Mus musculus BAC clone RP23-281H23 from 8, comple... 44 4.1 1
(AC122381) Mus musculus BAC clone RP23-477C4 from chromosome... 44 4.1 1
(AC121099) Mus musculus chromosome 3, clone RP24-501F21, com... 44 4.1 1
(AC120863) Mus musculus chromosome 7, clone RP23-84H3, compl... 44 4.1 1
(AC119865) Mus musculus chromosome 6, clone RP23-390N11, com... 44 4.1 1
(AC116503) Mus musculus chromosome 9, clone RP24-302M3, comp... 44 4.1 1
(AC114553) Mus musculus chromosome 5, clone RP23-408M16, com... 44 4.1 1
(AC110911) Mus musculus chromosome 7, clone RP24-357A15, com... 44 4.1 1
(AC102303) Mus musculus chromosome 1, clone RP24-403I11, com... 44 4.1 1
(AC099174) Rattus norvegicus 4 BAC CH230-98I1 (Children's Ho... 44 4.1 1
(AC023285) Mus musculus strain C57BL6/J chromosome 6 clone R... 44 4.1 1
(BS000630) Pan troglodytes chromosome Y clone: PTB-245N19. 44 4.1 1
(AC200306) Pongo abelii BAC clone CH276-525G16 from chromoso... 44 4.1 1
(AC192155) Pan troglodytes BAC clone CH251-501D3 from chromo... 44 4.1 1
(AC189687) Pan troglodytes BAC clone CH251-584M24 from chrom... 44 4.1 1
(AC183533) Pan troglodytes BAC clone CH251-551K15 from chrom... 44 4.1 1
(AC161614) Pan troglodytes BAC clone CH251-575E11 from chrom... 44 4.1 1
(AC146183) Pan troglodytes BAC clone CH251-548L16 from Y, co... 44 4.1 1
(AC144099) Rhesus Macaque BAC CH250-272J18 () complete sequ... 44 4.1 1
(Z28032) S.cerevisiae chromosome XI reading frame ORF YKL032c. 44 4.1 1
(X71622) Saccharomyces cerevisiae DNA sequence for Kazal ser... 44 4.1 1
(L16900) Yeast intrastrand crosslink recognition protein (Ix... 44 4.1 1
(CT837075) Oryza sativa (indica cultivar-group) cDNA clone:O... 44 4.1 1
(CR382129) Yarrowia lipolytica strain CLIB122 chromosome C c... 44 4.1 1
(CR382123) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 44 4.1 1
(CP000497) Pichia stipitis CBS 6054 chromosome 3, complete s... 44 4.1 1
(AY924730) Arabidopsis thaliana hypothetical protein (At1g75... 44 4.1 1
(AY850394) Lycopersicon esculentum cultivar Heinz1706 chromo... 44 4.1 1
(AY800620) Arabidopsis thaliana clone H0000001204 hypothetic... 44 4.1 1
(AY162209) Antirrhinum majus ROSULATA (ROA) mRNA, complete cds. 44 4.1 1
(AY096655) Arabidopsis thaliana unknown protein (At4g32600) ... 44 4.1 1
(AY081300) Arabidopsis thaliana putative protein (At4g32600)... 44 4.1 1
(AY074271) Arabidopsis thaliana unknown protein (At4g32600) ... 44 4.1 1
(AP006852) Candida albicans genomic DNA, chromosome 7, compl... 44 4.1 1
(AL161581) Arabidopsis thaliana DNA chromosome 4, contig fra... 44 4.1 1
(AL022537) Arabidopsis thaliana DNA chromosome 4, BAC clone ... 44 4.1 1
(AJ519511) Bencomia exstipulata microsatellite DNA, clone EX... 44 4.1 1
(AE017350) Cryptococcus neoformans var. neoformans JEC21 chr... 44 4.1 1
(AC189224) Brassica rapa subsp. pekinensis clone KBrB011L09,... 44 4.1 1
(AC023754) Arabidopsis thaliana chromosome I BAC F1B16 genom... 44 4.1 1
(AC006434) Genomic sequence for Arabidopsis thaliana BAC F10... 44 4.1 1
(I66612) Sequence 12 from patent US 5670621. 44 4.1 1
(FB629633) Sequence 45356 from Patent WO2004081186. 44 4.1 1
(FB596770) Sequence 12493 from Patent WO2004081186. 44 4.1 1
(FB596664) Sequence 12387 from Patent WO2004081186. 44 4.1 1
(EA347436) Sequence 19928 from patent US 7306913. 44 4.1 1
(EA333202) Sequence 5694 from patent US 7306913. 44 4.1 1
(EA263881) Sequence 6 from patent US 7238475. 44 4.1 1
(EA239262) Sequence 103577 from patent US 7214786. 44 4.1 1
(EA106898) Sequence 177 from patent US 7196245. 44 4.1 1
(EA024056) Sequence 863 from patent US 7135558. 44 4.1 1
(EA024055) Sequence 862 from patent US 7135558. 44 4.1 1
(DL173691) Methods for Identifying the Target of a Compound ... 44 4.1 1
(DL173298) Methods for Identifying the Target of a Compound ... 44 4.1 1
(DL131093) Bax-responsive genes for drug target identificati... 44 4.1 1
(DL054890) COMPOSITIONS AND METHODS FOR THE THERAPY AND DIAG... 44 4.1 1
(DJ025879) Genome-wide DNA marker of Saccharomyces cerevisiae. 44 4.1 1
(DD217589) PROTEINS ASSOCIATED WITH CELL GROWTH, DIFFERENTIA... 44 4.1 1
(CS493957) Sequence 835 from Patent WO2006130156. 44 4.1 1
(CQ589074) Sequence 16832 from Patent WO0171042. 44 4.1 1
(CQ589073) Sequence 16831 from Patent WO0171042. 44 4.1 1
(CQ462386) Sequence 5164 from Patent WO0192581. 44 4.1 1
(CQ410432) Sequence 17503 from Patent WO0170979. 44 4.1 1
(CQ404048) Sequence 11119 from Patent WO0170979. 44 4.1 1
(CQ397751) Sequence 4822 from Patent WO0170979. 44 4.1 1
(AX536896) Sequence 497 from Patent WO02064766. 44 4.1 1
(AX506356) Sequence 1051 from Patent WO0216655. 44 4.1 1
(AX489573) Sequence 6873 from Patent WO02053728. 44 4.1 1
(AX489251) Sequence 6551 from Patent WO02053728. 44 4.1 1
(AX488858) Sequence 6158 from Patent WO02053728. 44 4.1 1
(AX461314) Sequence 243 from Patent WO0198480. 44 4.1 1
(AX345796) Sequence 867 from Patent WO0200928. 44 4.1 1
(AR941653) Sequence 497 from patent US 7101990. 44 4.1 1
(AR556368) Sequence 11499 from patent US 6747137. 44 4.1 1
(AR550754) Sequence 5885 from patent US 6747137. 44 4.1 1
(AR546276) Sequence 1407 from patent US 6747137. 44 4.1 1
(AR243534) Sequence 7 from patent US 6475791. 44 4.1 1
(AC183551) Canis familiaris chromosome 34, clone XX-496O22, ... 44 4.1 1
(Y13119) Dictyostelium discoideum mRNA for CudA protein. 44 4.1 1
(U97407) Caenorhabditis elegans cosmid C34G6, complete seque... 44 4.1 1
(M38794) Dictyostelium discoideum protein kinase (PK1) mRNA,... 44 4.1 1
(EU113053) Lytechinus variegatus twist mRNA, complete cds. 44 4.1 1
(DQ342053) Dictyostelium discoideum STIP mRNA, complete cds. 44 4.1 1
(BT021296) Drosophila melanogaster RE26350 full insert cDNA. 44 4.1 1
(AY484461) Dictyostelium discoideum kinesin family member 6 ... 44 4.1 1
(AY190955) Drosophila virilis clone DVIF01_37_D05 (D1427) ge... 44 4.1 1
(AL929603) Trypanosoma brucei chromosome 1, complete sequence. 44 4.1 1
(AK222395) Ciona intestinalis mRNA for zinc finger protein, ... 44 4.1 1
(AF482395) Dictyostelium discoideum ABC transporter AbcG17 (... 44 4.1 1
(AF013962) Trichinella spiralis TsJ5 (tsJ5) gene, complete cds. 44 4.1 1
(AE014297) Drosophila melanogaster chromosome 3R, complete s... 44 4.1 1
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 44 4.1 1
(AE013599) Drosophila melanogaster chromosome 2R, complete s... 44 4.1 1
(AC189735) Trichinella spiralis chromosome UNK clone TS195-2... 44 4.1 1
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 44 4.1 1
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 44 4.1 1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 44 4.1 1
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 44 4.1 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 44 4.1 1
(AC116955) Dictyostelium discoideum chromosome 2 map 5455881... 44 4.1 1
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 44 4.1 1
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 44 4.1 1
(AC091225) Drosophila melanogaster 3L BAC RP98-34B24 (Roswel... 44 4.1 1
(AC090900) Drosophila melanogaster clone BACR30C07, complete... 44 4.1 1
(AC007808) Drosophila melanogaster clone BACR18C01, complete... 44 4.1 1
(AC004306) Drosophila melanogaster DNA sequence (P1 DS01386 ... 44 4.1 1
(AB009080) Dictyostelium discoideum gene for TRFA, complete ... 44 4.1 1
(X77343) Homo sapiens AP-2 gene for transcription factor AP-2. 44 4.1 1
(BC039405) Homo sapiens cDNA clone IMAGE:5300947. 44 4.1 1
(BC018087) Homo sapiens cDNA clone IMAGE:4795989. 44 4.1 1
(BC017754) Homo sapiens transcription factor AP-2 alpha (act... 44 4.1 1
(AP006213) Homo sapiens genomic DNA, chromosome 11, clone:CM... 44 4.1 1
(AP005364) Homo sapiens genomic DNA, chromosome 8q23, clone:... 44 4.1 1
(AP002012) Homo sapiens genomic DNA, chromosome 4q22-q24, cl... 44 4.1 1
(AL589764) Human DNA sequence from clone RP11-806J18 on chro... 44 4.1 1
(AL450423) Human DNA sequence from clone RP11-190J12 on chro... 44 4.1 1
(AL360268) Human DNA sequence from clone RP11-379C10 on chro... 44 4.1 1
(AL355543) Human DNA sequence from clone RP11-86E10 on chrom... 44 4.1 1
(AL354833) Human DNA sequence from clone RP11-157L14 on chro... 44 4.1 1
(AL158067) Human DNA sequence from clone RP11-86C3 on chromo... 44 4.1 1
(AL138885) Human DNA sequence from clone RP1-290I10 on chrom... 44 4.1 1
(AL118503) Human DNA sequence from clone RP4-689C5 on chromo... 44 4.1 1
(AF265340) Homo sapiens chromosome 16 clone BAC 504N19, comp... 44 4.1 1
(AC107877) Homo sapiens chromosome 8, clone RP11-74P9, compl... 44 4.1 1
(AC104692) Homo sapiens BAC clone RP11-208G20 from 7, comple... 44 4.1 1
(AC084877) Homo sapiens 12 BAC RP11-158O11 (Roswell Park Can... 44 4.1 1
(AC083902) Homo sapiens BAC clone RP11-766F14 from 4, comple... 44 4.1 1
(AC018422) Homo sapiens, clone RP11-19G4, complete sequence. 44 4.1 1
(AC010583) Homo sapiens chromosome 11 clone RP11-61J24, comp... 44 4.1 1
(AC008786) Homo sapiens chromosome 5 clone CTD-2037L6, compl... 44 4.1 1
(AC005886) b240g16, complete sequence. 44 4.1 1
(AC162864) Mus musculus chromosome 3 clone RP24-383O7 map 3,... 44 4.1 1
(AC150529) Bos taurus clone CH240-103F7, WORKING DRAFT SEQUE... 44 4.1 1
(AC149942) Strongylocentrotus purpuratus clone R3-16I1, WORK... 44 4.1 1
(AC148580) Gasterosteus aculeatus clone ch213-205p22, WORKIN... 44 4.1 1
(AC143781) Macaca mulatta clone CH250-270O20, WORKING DRAFT ... 44 4.1 1
(AC143681) Macaca mulatta clone CH250-269M10, *** SEQUENCING... 44 4.1 1
(AC143184) Macaca mulatta clone CH250-269L7, *** SEQUENCING ... 44 4.1 1
(AC137543) Gallus gallus clone TAM31-30K22, WORKING DRAFT SE... 44 4.1 1
(AC137335) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 44 4.1 1
(AC136591) Homo sapiens chromosome 16 clone CTD-2547F9, WORK... 44 4.1 1
(AC136458) Rattus norvegicus clone CH230-1C18, *** SEQUENCIN... 44 4.1 1
(AC135035) Rattus norvegicus clone CH230-518N2, *** SEQUENCI... 44 4.1 1
(AC133299) Rattus norvegicus clone CH230-272I24, WORKING DRA... 44 4.1 1
(AC133052) Rattus norvegicus clone CH230-225L10, WORKING DRA... 44 4.1 1
(AC132739) Rattus norvegicus clone CH230-153F12, *** SEQUENC... 44 4.1 1
(AC132523) Rattus norvegicus clone CH230-440A17, WORKING DRA... 44 4.1 1
(AC132496) Rattus norvegicus clone CH230-374P21, *** SEQUENC... 44 4.1 1
(AC131368) Rattus norvegicus clone CH230-123J22, WORKING DRA... 44 4.1 1
(AC129790) Rattus norvegicus clone CH230-328F24, *** SEQUENC... 44 4.1 1
(AC128575) Rattus norvegicus clone CH230-149J17, WORKING DRA... 44 4.1 1
(AC128444) Rattus norvegicus clone CH230-205P2, *** SEQUENCI... 44 4.1 1
(AC128354) Rattus norvegicus clone CH230-53J16, WORKING DRAF... 44 4.1 1
(AC128290) Rattus norvegicus clone CH230-303N2, WORKING DRAF... 44 4.1 1
(AC128118) Rattus norvegicus clone CH230-417M21, WORKING DRA... 44 4.1 1
(AC128048) Rattus norvegicus clone CH230-107I22, *** SEQUENC... 44 4.1 1
(AC128013) Rattus norvegicus clone CH230-481G12, WORKING DRA... 44 4.1 1
(AC127130) Rattus norvegicus clone CH230-118H23, *** SEQUENC... 44 4.1 1
(AC127050) Rattus norvegicus clone CH230-37E10, WORKING DRAF... 44 4.1 1
(AC126194) Rattus norvegicus clone CH230-154G18, *** SEQUENC... 44 4.1 1
(AC124236) Mus musculus clone RP24-299C2, WORKING DRAFT SEQU... 44 4.1 1
(AC123386) Rattus norvegicus clone CH230-511C6, *** SEQUENCI... 44 4.1 1
(AC123118) Rattus norvegicus clone CH230-168O8, *** SEQUENCI... 44 4.1 1
(AC122098) Rattus norvegicus clone CH230-247F3, WORKING DRAF... 44 4.1 1
(AC119697) Rattus norvegicus clone CH230-135B13, WORKING DRA... 44 4.1 1
(AC119528) Rattus norvegicus clone CH230-424B13, WORKING DRA... 44 4.1 1
(AC119300) Rattus norvegicus clone CH230-274M7, *** SEQUENCI... 44 4.1 1
(AC118828) Rattus norvegicus clone CH230-384F1, WORKING DRAF... 44 4.1 1
(AC118366) Rattus norvegicus clone CH230-289L4, *** SEQUENCI... 44 4.1 1
(AC116088) Rattus norvegicus clone CH230-343I4, WORKING DRAF... 44 4.1 1
(AC115444) Rattus norvegicus clone CH230-81E1, *** SEQUENCIN... 44 4.1 1
(AC114251) Rattus norvegicus clone CH230-343K20, WORKING DRA... 44 4.1 1
(AC114088) Rattus norvegicus clone CH230-35J16, *** SEQUENCI... 44 4.1 1
(AC113908) Rattus norvegicus clone CH230-396P4, WORKING DRAF... 44 4.1 1
(AC111600) Rattus norvegicus clone CH230-173F22, *** SEQUENC... 44 4.1 1
(AC110134) Rattus norvegicus clone CH230-45H18, *** SEQUENCI... 44 4.1 1
(AC109745) Rattus norvegicus clone CH230-34C5, *** SEQUENCIN... 44 4.1 1
(AC106272) Rattus norvegicus clone CH230-229F7, *** SEQUENCI... 44 4.1 1
(AC106160) Rattus norvegicus clone CH230-195N12, WORKING DRA... 44 4.1 1
(AC106104) Rattus norvegicus clone CH230-142M14, *** SEQUENC... 44 4.1 1
(AC106081) Rattus norvegicus clone CH230-119I17, *** SEQUENC... 44 4.1 1

>(C24389) Dictyostelium discoideum gamete cDNA, clone FC-AT02.
Length = 241

Score = 232 bits (117), Expect = 8e-57
Identities = 117/117 (100%)
Strand = Plus / Plus


Query: 1 atttctctgaccaatttcacattctcattattatcagatacaacaaatattactatagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttctctgaccaatttcacattctcattattatcagatacaacaaatattactatagta 60


Query: 61 atacctcaacaacagcaacaacaacaagtttatcaagtttaaattccattggaatta 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atacctcaacaacagcaacaacaacaagtttatcaagtttaaattccattggaatta 117

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 158,283,565
Number of extensions: 12748635
Number of successful extensions: 2310912
Number of sequences better than 10.0: 1072
Length of query: 428
Length of database: 98,766,808,389
Length adjustment: 23
Effective length of query: 405
Effective length of database: 96,507,600,660
Effective search space: 39085578267300
Effective search space used: 39085578267300
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 7.20
Homology vs Protein
Query= Contig-U15988-1 (Contig-U15988-1Q) /CSM_Contig/Contig-U15988-1Q.Seq.d
(428 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

***** No hits found ******

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 130,087,823
Number of extensions: 949513
Number of successful extensions: 564
Number of sequences better than 10.0: 0
Number of HSP's gapped: 564
Number of HSP's successfully gapped: 0
Length of query: 142
Length of database: 1,051,180,864
Length adjustment: 105
Effective length of query: 37
Effective length of database: 711,342,169
Effective search space: 26319660253
Effective search space used: 26319660253
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)

PSORT

psg: 0.71 gvh: 0.17 alm: 0.56 top: 0.53 tms: 0.00 mit: 0.37 mip: 0.00
nuc: 7.98 erl: 0.00 erm: 0.80 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

72.0 %: nuclear
16.0 %: cytoplasmic
8.0 %: mitochondrial
4.0 %: cytoskeletal

>> prediction for Contig-U15988-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 0