Contig-U03207-1
Contig ID Contig-U03207-1
Contig update 2002. 9.13
Contig sequence
>Contig-U03207-1 (Contig-U03207-1Q) /CSM_Contig/Contig-U03207-1Q.Seq.d
ATATATAACACACCATATACACTTACATATAAAAACTATAAATAGTAAAT
AAATAAATAAAATTTTTTTTTTTTTTTTAANGTAAATAATTAAATAAATA
AAAAANCCTTTTTTTT

Gap no gap
Contig length 116
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 4355653
End point 4355770
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U03207
List of clone(s)

est1=CFF130F,1,117
Translated Amino Acid sequence
YITHHIHLHIKTINSK*inkifffflx*iik*ikxpff


Translated Amino Acid sequence (All Frames)
Frame A:
iyntpytltyknyk**ink*nfffffxvnn*inkkxff


Frame B:
YITHHIHLHIKTINSK*inkifffflx*iik*ikxpff


Frame C:
i*htiytyi*kl*ivnk*ikfffff*xk*lnk*kxlff


own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U03207-1 (Contig-U03207-1Q)
/CSM_Contig/Contig-U03207-1Q.Seq.d
(116 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U03207-1 (Contig-U03207-1Q) /CSM_Contig/Conti... 48 2e-06
Contig-U06287-1 (Contig-U06287-1Q) /CSM_Contig/Conti... 44 3e-05
Contig-U04801-1 (Contig-U04801-1Q) /CSM_Contig/Conti... 44 3e-05
Contig-U04877-1 (Contig-U04877-1Q) /CSM_Contig/Conti... 42 1e-04
Contig-U04603-1 (Contig-U04603-1Q) /CSM_Contig/Conti... 42 1e-04
Contig-U12474-1 (Contig-U12474-1Q) /CSM_Contig/Conti... 40 5e-04
Contig-U04448-1 (Contig-U04448-1Q) /CSM_Contig/Conti... 40 5e-04
Contig-U01028-1 (Contig-U01028-1Q) /CSM_Contig/Conti... 40 5e-04
Contig-U14594-1 (Contig-U14594-1Q) /CSM_Contig/Conti... 38 0.002
Contig-U14589-1 (Contig-U14589-1Q) /CSM_Contig/Conti... 38 0.002

>Contig-U03207-1 (Contig-U03207-1Q) /CSM_Contig/Contig-U03207-1Q.Seq.d
Length = 116

Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus


Query: 82 gtaaataattaaataaataaaaaa 105
||||||||||||||||||||||||
Sbjct: 82 gtaaataattaaataaataaaaaa 105


Score = 26.3 bits (13), Expect = 7.1
Identities = 13/13 (100%)
Strand = Plus / Plus


Query: 91 taaataaataaaa 103
|||||||||||||
Sbjct: 50 taaataaataaaa 62


>Contig-U06287-1 (Contig-U06287-1Q) /CSM_Contig/Contig-U06287-1Q.Seq.d
Length = 728

Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 84 aaataattaaataaataaaaaa 105
||||||||||||||||||||||
Sbjct: 683 aaataattaaataaataaaaaa 704


>Contig-U04801-1 (Contig-U04801-1Q) /CSM_Contig/Contig-U04801-1Q.Seq.d
Length = 516

Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 84 aaataattaaataaataaaaaa 105
||||||||||||||||||||||
Sbjct: 474 aaataattaaataaataaaaaa 495


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5689
Number of Sequences: 6905
Number of extensions: 5689
Number of successful extensions: 3610
Number of sequences better than 10.0: 1242
length of query: 116
length of database: 5,674,871
effective HSP length: 14
effective length of query: 102
effective length of database: 5,578,201
effective search space: 568976502
effective search space used: 568976502
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 13 (26.3 bits)
dna update 2009. 5.27
Homology vs DNA
Query= Contig-U03207-1 (Contig-U03207-1Q) /CSM_Contig/Contig-U03207-1Q.Seq.d
(116 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(CU467645) Zebrafish DNA sequence from clone DKEY-16P14 in l... 48 0.063 1
(CR759802) Zebrafish DNA sequence from clone DKEY-261L7 in l... 48 0.063 1
(CU695020) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.063 1
(CT997820) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.063 1
(CC099909) CSU-K34.108C1.T7 CSU-K34 Aedes aegypti genomic cl... 48 0.063 1
(DB956348) Glycine max cDNA, clone: GMFL02-03-I08, 5'end. 48 0.063 1
(BJ358787) Dictyostelium discoideum cDNA clone:ddc11k07, 5' ... 48 0.063 1
(CU570787) Zebrafish DNA sequence from clone CH73-272H16 in ... 46 0.25 1
(CU469415) Zebrafish DNA sequence from clone CH211-269C3 in ... 46 0.25 1
(CU468285) Zebrafish DNA sequence from clone CH73-115F13 in ... 46 0.25 1
(CT841955) Zebrafish DNA sequence from clone DKEY-240A16 in ... 46 0.25 1
(CT583690) Zebrafish DNA sequence from clone CH211-89L23 in ... 46 0.25 1
(CR925880) Zebrafish DNA sequence from clone DKEY-187E18. 46 0.25 1
(CR391947) Zebrafish DNA sequence from clone DKEYP-88A4 in l... 46 0.25 1
(CR382339) Zebrafish DNA sequence from clone CH211-129E5 in ... 46 0.25 1
(BX908726) Zebrafish DNA sequence from clone DKEY-74I2 in li... 46 0.25 1
(BX571947) Zebrafish DNA sequence from clone DKEY-162F21 in ... 46 0.25 1
(BX571820) Zebrafish DNA sequence from clone DKEY-14G9 in li... 46 0.25 1
(BX511136) Zebrafish DNA sequence from clone DKEY-71E3 in li... 46 0.25 1
(BX294129) Zebrafish DNA sequence from clone DKEYP-34H12 in ... 46 0.25 1
(BX072529) Zebrafish DNA sequence from clone DKEY-20D17 in l... 46 0.25 1
(BX005274) Zebrafish DNA sequence from clone DKEY-77B9 in li... 46 0.25 1
(BX005107) Zebrafish DNA sequence from clone CH211-204F4 in ... 46 0.25 1
(AL928676) Zebrafish DNA sequence from clone DKEY-121K17. 46 0.25 1
(AL954869) Mouse DNA sequence from clone RP23-477I13 on chro... 46 0.25 1
(AP009594) Solanum lycopersicum DNA, chromosome 8, clone: C0... 46 0.25 1
(AM461949) Vitis vinifera contig VV78X127711.9, whole genome... 46 0.25 1
(AM437519) Vitis vinifera, whole genome shotgun sequence, co... 46 0.25 1
(AC149396) Phakopsora pachyrhizi clone JGIAFNA-61H12, comple... 46 0.25 1
(DL088973) Diagnosis of existing illnesses or that praedispo... 46 0.25 1
(DL088972) Diagnosis of existing illnesses or that praedispo... 46 0.25 1
(DL088969) Diagnosis of existing illnesses or that praedispo... 46 0.25 1
(DL088968) Diagnosis of existing illnesses or that praedispo... 46 0.25 1
(DL012338) Diagnosis of existing illnesses or that praedispo... 46 0.25 1
(DL012337) Diagnosis of existing illnesses or that praedispo... 46 0.25 1
(DL012334) Diagnosis of existing illnesses or that praedispo... 46 0.25 1
(DL012333) Diagnosis of existing illnesses or that praedispo... 46 0.25 1
(DJ358584) METHODS AND NUCLEIC ACIDS FOR THE ANALYSIS OF GEN... 46 0.25 1
(DJ358560) METHODS AND NUCLEIC ACIDS FOR THE ANALYSIS OF GEN... 46 0.25 1
(CS114303) Sequence 1061 from Patent WO2005054517. 46 0.25 1
(CS114279) Sequence 1037 from Patent WO2005054517. 46 0.25 1
(GM624802) Sequence 3324 from Patent EP1942197. 46 0.25 1
(GM624801) Sequence 3323 from Patent EP1942197. 46 0.25 1
(GM624798) Sequence 3320 from Patent EP1942197. 46 0.25 1
(GM624797) Sequence 3319 from Patent EP1942197. 46 0.25 1
(AL929351) Plasmodium falciparum strain 3D7, chromosome 5, s... 46 0.25 1
(AF020281) Dictyostelium discoideum CbpB (cbpB) gene, partia... 46 0.25 1
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1... 46 0.25 1
(AC133758) Rattus norvegicus clone CH230-4O13, WORKING DRAFT... 46 0.25 1
(CU929273) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.25 1
(CU929262) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.25 1
(CU855529) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.25 1
(CU570655) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.25 1
(CU179695) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.25 1
(CR352214) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 0.25 1
(AC220569) Bos taurus clone CH240-352P7, WORKING DRAFT SEQUE... 46 0.25 1
(AL981915) Danio rerio genomic clone DKEY-48I13, genomic sur... 46 0.25 1
(AL743484) Danio rerio genomic clone DKEY-3H21, genomic surv... 46 0.25 1
(DX033329) KBrB030L21F KBrB, Brassica rapa BamHI BAC library... 46 0.25 1
(CZ913564) 4013003B06.x1 4013 - RescueMu Grid O Zea mays gen... 46 0.25 1
(CZ907755) 4011009G04.y1 4011 - RescueMu Grid J Zea mays gen... 46 0.25 1
(CZ907441) 4011007A11.x1 4011 - RescueMu Grid J Zea mays gen... 46 0.25 1
(CZ907328) 4011006E06.y2 4011 - RescueMu Grid J Zea mays gen... 46 0.25 1
(CZ502787) GMW2-8G13a.g1 GMW2 Glycine max genomic, genomic s... 46 0.25 1
(CG731156) 1119134G11.2EL_x1 1119 - RescueMu Grid AA Zea may... 46 0.25 1
(CG723479) 1119076F03.x1 1119 - RescueMu Grid AA Zea mays ge... 46 0.25 1
(CG708212) 1119007H05.y1 1119 - RescueMu Grid AA Zea mays ge... 46 0.25 1
(CG708166) 1119007D02.y1 1119 - RescueMu Grid AA Zea mays ge... 46 0.25 1
(BX148682) Danio rerio genomic clone DKEY-118F10, genomic su... 46 0.25 1
(DW091081) CLPY2350.b1_K11.ab1 CLP(XYZ) lettuce perennis Lac... 46 0.25 1
(CT627382) Danio rerio EST, clone ZF_mu_66e11 3'. 46 0.25 1
(CK196462) FGAS004920 Triticum aestivum FGAS: Library 3 Gate... 46 0.25 1
(CD283992) G39166.16 NCI_CGAP_ZKid1 Danio rerio cDNA clone I... 46 0.25 1
(CA246449) SCEZFL5092F08.g Saccharum officinarum FL5 Sacchar... 46 0.25 1
(BQ783720) faa65a12.x1 Gong zebrafish testis Danio rerio cDN... 46 0.25 1
(BQ194947) UI-R-CN1-cmd-g-15-0-UI.s1 UI-R-CN1 Rattus norvegi... 46 0.25 1
(AI145733) UI-R-BT0-qd-g-08-0-UI.s1 UI-R-BT0 Rattus norvegic... 46 0.25 1
(FM960877) Glossina morsitans morsitans EST, clone GMsg50h03... 46 0.25 1
(FG290626) 1108793324954 New World Screwworm Egg 9261 ESTs C... 46 0.25 1
(FG087827) CMRC-FF-IH0-aci-l-15-0-CMRC.r1 Ceratitis capitata... 46 0.25 1
(FD428048) Atr01b_50_C05_C010.g1 FGP Male Amborella trichopo... 46 0.25 1
(ES484501) BGBV-aac65g09.b1 Snail_EST_pSMART Biomphalaria gl... 46 0.25 1
(CU855799) Zebrafish DNA sequence from clone CH1073-183F13 i... 44 0.99 1
(CU595866) Zebrafish DNA sequence from clone CH1073-86F9 in ... 44 0.99 1
(CT583662) Zebrafish DNA sequence from clone RP71-45H24 in l... 44 0.99 1
(CT573141) Zebrafish DNA sequence from clone CH211-203L24 in... 44 0.99 1
(CT027703) Zebrafish DNA sequence from clone CH211-268L2 in ... 44 0.99 1
(CR925769) Zebrafish DNA sequence from clone DKEY-208K7. 44 0.99 1
(CR847969) Zebrafish DNA sequence from clone CH211-264G11 in... 44 0.99 1
(CR450703) Zebrafish DNA sequence from clone DKEY-75A21 in l... 44 0.99 1
(CR405690) Zebrafish DNA sequence from clone CH211-208M13 in... 44 0.99 1
(CR381704) Zebrafish DNA sequence from clone CH211-202F6 in ... 44 0.99 1
(CR381538) Zebrafish DNA sequence from clone CH211-87B12 in ... 44 0.99 1
(CR352260) Zebrafish DNA sequence from clone CH211-234B14 in... 44 0.99 1
(CR339054) Zebrafish DNA sequence from clone DKEY-151M22 in ... 44 0.99 1
(BX957355) Zebrafish DNA sequence from clone CH211-66I15 in ... 44 0.99 1
(BX936305) Zebrafish DNA sequence from clone CH211-51N3 in l... 44 0.99 1
(BX914217) Zebrafish DNA sequence from clone DKEY-175H14 in ... 44 0.99 1
(BX914204) Zebrafish DNA sequence from clone CH211-113E18 in... 44 0.99 1
(BX897731) Zebrafish DNA sequence from clone DKEY-146J3 in l... 44 0.99 1
(BX682556) Zebrafish DNA sequence from clone DKEY-105I19 in ... 44 0.99 1
(BX571683) Zebrafish DNA sequence from clone CH211-279E7 in ... 44 0.99 1
(BX539313) Zebrafish DNA sequence from clone DKEYP-84F3 in l... 44 0.99 1
(BX511165) Zebrafish DNA sequence from clone DKEY-22L14 in l... 44 0.99 1
(BX510323) Zebrafish DNA sequence from clone CH211-266F12 in... 44 0.99 1
(BX324195) Zebrafish DNA sequence from clone CH211-288O15 in... 44 0.99 1
(BX324113) Zebrafish DNA sequence from clone DKEYP-68B7 in l... 44 0.99 1
(BX323045) Zebrafish DNA sequence from clone CH211-248I1 in ... 44 0.99 1
(BX248086) Zebrafish DNA sequence from clone CH211-277E21 in... 44 0.99 1
(BX119925) Zebrafish DNA sequence from clone CH211-197K21 in... 44 0.99 1
(BX004838) Zebrafish DNA sequence from clone DKEY-29N1 in li... 44 0.99 1
(BX004830) Zebrafish DNA sequence from clone CH211-159I8 in ... 44 0.99 1
(BX004764) Zebrafish DNA sequence from clone DKEY-162L4 in l... 44 0.99 1
(BX001041) Zebrafish DNA sequence from clone CH211-62M7. 44 0.99 1
(AL954386) Zebrafish DNA sequence from clone CH211-242P18 in... 44 0.99 1
(AL953881) Zebrafish DNA sequence from clone CH211-208N2 in ... 44 0.99 1
(AL929541) Zebrafish DNA sequence from clone CH211-133D2 in ... 44 0.99 1
(AL928852) Zebrafish DNA sequence from clone CH211-287A12. 44 0.99 1
(AL672213) Zebrafish DNA sequence from clone BUSM1-73O4 Cont... 44 0.99 1
(AC192714) Gallus gallus BAC clone CH261-175C10 from chromos... 44 0.99 1
(AC187273) Gallus gallus BAC clone CH261-69F17 from chromoso... 44 0.99 1
(BR000041) TPA_inf: Danio rerio SN4TDR gene for 4SNc-Tudor d... 44 0.99 1
(BV843731) pRRL2:Newb:20080411:218720 USMARC Pig Breed SNP D... 44 0.99 1
(BV563487) quu41e07.b1 Clint Pan troglodytes verus STS genom... 44 0.99 1
(BV549224) S215P6388FC4.T0 Clara Pan troglodytes troglodytes... 44 0.99 1
(BV531357) G591P619879RD1.T0 Clint Pan troglodytes verus STS... 44 0.99 1
(BV518117) sou29h04.g1 Clint Pan troglodytes verus STS genom... 44 0.99 1
(BV515069) rlt09c04.b1 Clint Pan troglodytes verus STS genom... 44 0.99 1
(BV507963) qgg97f08.g1 Clint Pan troglodytes verus STS genom... 44 0.99 1
(BV507087) qey90h06.b1 Clint Pan troglodytes verus STS genom... 44 0.99 1
(AL714012) Mouse DNA sequence from clone RP23-238N3 on chrom... 44 0.99 1
(AL596258) Mouse DNA sequence from clone RP23-226P4 on chrom... 44 0.99 1
(AC154739) Mus musculus BAC clone RP23-117B4 from 9, complet... 44 0.99 1
(AC154630) Mus musculus BAC clone RP23-319C8 from 9, complet... 44 0.99 1
(AC133199) Mus musculus BAC clone RP23-263B18 from 6, comple... 44 0.99 1
(AC131303) Mus musculus chromosome 1, clone RP24-119O19, com... 44 0.99 1
(AC123556) Mus musculus BAC clone RP23-176M9 from 1, complet... 44 0.99 1
(AC122286) Mus musculus BAC clone RP23-252F4 from chromosome... 44 0.99 1
(AC119876) Mus musculus chromosome 3, clone RP24-309A12, com... 44 0.99 1
(AC118246) Mus musculus chromosome 3, clone RP23-302N4, comp... 44 0.99 1
(BS000190) Pan troglodytes chromosome 22 clone:RP43-031M16, ... 44 0.99 1
(AC207167) Pongo abelii BAC clone CH276-81I3 from chromosome... 44 0.99 1
(AC198460) MACACA MULATTA BAC clone CH250-130L7 from chromos... 44 0.99 1
(AC187617) Pan troglodytes BAC clone CH251-588I14 from chrom... 44 0.99 1
(AC150904) Pan troglodytes BAC clone CH251-1149I8 from chrom... 44 0.99 1
(AM485863) Vitis vinifera contig VV78X212429.8, whole genome... 44 0.99 1
(AM473298) Vitis vinifera contig VV78X117752.8, whole genome... 44 0.99 1
(AM443622) Vitis vinifera contig VV78X046302.7, whole genome... 44 0.99 1
(AC150843) Medicago truncatula clone mth2-103p8, complete se... 44 0.99 1
(AC147496) Medicago truncatula clone mth2-6i7, complete sequ... 44 0.99 1
(CS086346) Sequence 51 from Patent WO2005042786. 44 0.99 1
(CQ869999) Sequence 420 from Patent WO2004074320. 44 0.99 1
(BD453066) Diagnosis of Diseases Associated with tumor suppr... 44 0.99 1
(AX251545) Sequence 513 from Patent WO0168912. 44 0.99 1
(CU914733) H.numata DNA sequence from clone AEHN-38C19. 44 0.99 1
(CU655868) H.numata DNA sequence from clone AEHN-31F4. 44 0.99 1
(AY553180) Reticulitermes speratus 16S ribosomal RNA gene, p... 44 0.99 1
(AL034557) Plasmodium falciparum MAL4P1. 44 0.99 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 44 0.99 1
(EF444987) Homo sapiens immunoglobulin superfamily, member 4... 44 0.99 1
(BX640542) Human DNA sequence from clone RP13-109G9 on chrom... 44 0.99 1
(AP003174) Homo sapiens genomic DNA, chromosome 11q, clone:R... 44 0.99 1
(AL122016) Human DNA sequence from clone RP1-161C16 on chrom... 44 0.99 1
(AL122002) Human DNA sequence from clone RP4-651E10 on chrom... 44 0.99 1
(AL117338) Human DNA sequence from clone RP11-490O24 on chro... 44 0.99 1
(AC128685) Homo sapiens 3 BAC RP11-535I24 (Roswell Park Canc... 44 0.99 1
(AC119749) Homo sapiens chromosome 1 clone RP11-444C12, comp... 44 0.99 1
(AC105410) Homo sapiens chromosome 16 clone CTD-2348G11, com... 44 0.99 1
(AC092115) Homo sapiens chromosome 16 clone CTD-2033A16, com... 44 0.99 1
(AC011347) Homo sapiens chromosome 5 clone CTC-295J22, compl... 44 0.99 1
(AC010304) Homo sapiens chromosome 5 clone CTB-3C20, complet... 44 0.99 1
(AC008551) Homo sapiens chromosome 16 clone CTC-508F8, compl... 44 0.99 1
(AC152647) Bos taurus clone CH240-16J20, WORKING DRAFT SEQUE... 44 0.99 1
(AC100902) Mus musculus clone RP23-70E20, LOW-PASS SEQUENCE ... 44 0.99 1
(FP236685) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.99 1
(FP236328) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.99 1
(FP102409) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.99 1
(FP085532) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.99 1
(CU928611) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.99 1
(CU915790) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.99 1
(CU914291) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.99 1
(CU694578) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.99 1
(CU694495) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.99 1
(CU693382) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.99 1
(CU655915) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.99 1
(AC051650) Homo sapiens chromosome 11 clone RP11-243C19 map ... 44 0.99 1
(CU466974) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.99 1
(CU466445) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.99 1
(CU302429) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.99 1
(CU151857) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.99 1
(CT030120) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.99 1
(CR936397) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.99 1
(CR926138) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.99 1
(CR925897) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.99 1
(CR848042) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 44 0.99 1
(BX470268) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 44 0.99 1
(BX323011) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.99 1
(AP003167) Homo sapiens genomic DNA, chromosome 11q clone:RP... 44 0.99 1
(AL353758) Human DNA sequence *** SEQUENCING CANCELLED *** f... 44 0.99 1
(AC231002) Bos taurus clone CH240-493I4, WORKING DRAFT SEQUE... 44 0.99 1
(AC223684) Bos taurus clone CH240-461I24, WORKING DRAFT SEQU... 44 0.99 1
(AC216721) Solanum lycopersicum chromosome 9 clone C09SLe001... 44 0.99 1
(AC194879) Zea mays chromosome 8 clone CH201-275D14; ZMMBBc0... 44 0.99 1
(AC188017) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB... 44 0.99 1
(AC184383) Strongylocentrotus purpuratus clone R3-3100K13, W... 44 0.99 1
(AC180873) Strongylocentrotus purpuratus clone R3-3067L20, W... 44 0.99 1
(AC178044) Strongylocentrotus purpuratus clone R3-3056B09, W... 44 0.99 1
(AC177604) Strongylocentrotus purpuratus clone R3-1023L14, W... 44 0.99 1
(AC173561) Strongylocentrotus purpuratus clone R3-14C2, WORK... 44 0.99 1
(AC172911) Bos taurus clone CH240-302E2, WORKING DRAFT SEQUE... 44 0.99 1
(AC171605) Bos taurus clone CH240-268G17, WORKING DRAFT SEQU... 44 0.99 1
(AC170204) Macaca mulatta clone CH250-65E11, WORKING DRAFT S... 44 0.99 1
(AC025080) Homo sapiens chromosome 16 clone RP11-239C6 map 1... 44 0.99 1
(AC021588) Homo sapiens chromosome 11 clone RP11-136I14 map ... 44 0.99 1
(AC011048) Homo sapiens clone 9_L_11, LOW-PASS SEQUENCE SAMP... 44 0.99 1
(AK034950) Mus musculus 12 days embryo embryonic body betwee... 44 0.99 1
(BH438965) BOGJD31TR BOGJ Brassica oleracea genomic clone BO... 44 0.99 1
(AZ880724) RPCI-23-202N9.TJ RPCI-23 Mus musculus genomic clo... 44 0.99 1
(AZ239834) RPCI-23-87N11.TV RPCI-23 Mus musculus genomic clo... 44 0.99 1
(AZ119325) RPCI-23-476I16.TJ RPCI-23 Mus musculus genomic cl... 44 0.99 1
(FI502751) AHT1B5RGH005-D20TP AHT1BS-Rearray Arachis hypogae... 44 0.99 1
(FH490518) CHO_OF4854xg11r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 0.99 1
(FH333578) CHO_OF4586xc11r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 0.99 1
(FH251975) CHO_OF3209xo04r1.ab1 CHO_OF3 Nicotiana tabacum ge... 44 0.99 1
(ET915598) CHO_OF205xk19r2.ab1 CHO_OF Nicotiana tabacum geno... 44 0.99 1
(ET902805) CHO_OF406xn24f2.ab1 CHO_OF Nicotiana tabacum geno... 44 0.99 1
(ET838671) CHO_OF888xk11r1.ab1 CHO_OF Nicotiana tabacum geno... 44 0.99 1
(ET837199) CHO_OF874xi04r1.ab1 CHO_OF Nicotiana tabacum geno... 44 0.99 1
(AM614038) Entamoeba invadens IP1 GSS, clone inv045b11.q1k. 44 0.99 1
(EI456496) PV_GBa0058D10.f PV_GBa Phaseolus vulgaris genomic... 44 0.99 1
(ED564636) AUAC-aab36e07.b1 Ascaris suum whole genome shotgu... 44 0.99 1
(ED492594) it56c10.g1 Sub-library of four pooled sorghum BAC... 44 0.99 1
(ED492287) it54e04.b1 Sub-library of four pooled sorghum BAC... 44 0.99 1
(ED491864) it52a08.g1 Sub-library of four pooled sorghum BAC... 44 0.99 1
(ED245584) AUAC-aab19c03.b1 Ascaris suum whole genome shotgu... 44 0.99 1
(DX901280) KBrH033P12F KBrH, Brassica rapa HindIII BAC libra... 44 0.99 1
(DX527971) GH_MBb0046K12f GH_MBb Gossypium hirsutum genomic ... 44 0.99 1
(DX471340) Cpl13399 Papaya Genomic DNA BAC Library Carica pa... 44 0.99 1
(DE415744) Bombyx mori genomic DNA, BAC clone:16D4B. 44 0.99 1
(DE374214) Bombyx mori genomic DNA, BAC clone:BET_642_E04. 44 0.99 1
(CZ907357) 4011006F07.y2 4011 - RescueMu Grid J Zea mays gen... 44 0.99 1
(CW297768) 104_780_11462217_116_35646_045 Sorghum methylatio... 44 0.99 1
(CW288492) 104_767_11411981_148_35539_031 Sorghum methylatio... 44 0.99 1
(CW288491) 104_767_11411981_116_35543_031 Sorghum methylatio... 44 0.99 1
(CU828266) A BAC library has been constructed from PN40024 g... 44 0.99 1
(CT512490) A BAC library has been constructed from cultivar ... 44 0.99 1
(CT194062) Sus scrofa genomic clone CH242-158I20, genomic su... 44 0.99 1
(CT034405) Sus scrofa genomic clone CH242-14G11, genomic sur... 44 0.99 1
(CR229287) Reverse strand read from insert in 5'HPRT inserti... 44 0.99 1
(CR020801) Reverse strand read from insert in 5'HPRT inserti... 44 0.99 1
(CL544481) OB__Ba0072L21.f OB__Ba Oryza brachyantha genomic ... 44 0.99 1
(BZ227139) CH230-497B19.TV CHORI-230 Segment 2 Rattus norveg... 44 0.99 1
(BH663323) BOHYG44TR BO_2_3_KB Brassica oleracea genomic clo... 44 0.99 1
(AG382870) Mus musculus molossinus DNA, clone:MSMg01-193K13.... 44 0.99 1
(AG371930) Mus musculus molossinus DNA, clone:MSMg01-177J08.... 44 0.99 1
(EL919147) NY4Th2_27_E06.g2_A039 NY4 theronts Ichthyophthiri... 44 0.99 1
(EB715136) F-813 Melon phloem library F Cucumis melo cDNA cl... 44 0.99 1
(EB270167) MCC014-F-028768-501 Non-Normalized MCC Neurons 1 ... 44 0.99 1
(DT178477) JGI_ANNO46750.fwd ANNO Pimephales promelas Whole ... 44 0.99 1
(AU261606) Dictyostelium discoideum vegetative cDNA clone:VS... 44 0.99 1
(DT156259) JGI_ANNO33450.fwd ANNO Pimephales promelas Whole ... 44 0.99 1
(DN570539) 92239294 Sea Urchin primary mesenchyme cell cDNA ... 44 0.99 1
(CU513158) Theobroma cacao, mRNA sequence (KZ0ABF10YB12FM1). 44 0.99 1
(CT645330) Danio rerio EST, clone ZF_mu_139i07 3'. 44 0.99 1
(CT645329) Danio rerio EST, clone ZF_mu_139i07 5'. 44 0.99 1
(CT639072) Danio rerio EST, clone ZF_mu_139k12 3'. 44 0.99 1
(CT612126) Danio rerio EST, clone ZF_mu_3g23 3'. 44 0.99 1
(CN992205) 69380_125_166_C06 Fundulus Heteroclitus Liver Fun... 44 0.99 1
(CK631085) AM0-AE0015-300702-011-F08 AE0015 Apis mellifera c... 44 0.99 1
(CK631053) AM0-AE0015-300702-011-D10 AE0015 Apis mellifera c... 44 0.99 1
(CK415576) AUF_IpPit_33_a10 Pituitary cDNA library Ictalurus... 44 0.99 1
(CK004046) AGENCOURT_16389763 NIH_MGC_228 Homo sapiens cDNA ... 44 0.99 1
(CA489189) AGENCOURT_10810265 MAPcL Homo sapiens cDNA clone ... 44 0.99 1
(AI110326) TENU3296 T. cruzi epimastigote normalized cDNA Li... 44 0.99 1
(BJ978632) Reticulitermes speratus gut symbiotic protist cDN... 44 0.99 1
(BI524481) 603051608R1 NIH_MGC_122 Homo sapiens cDNA clone I... 44 0.99 1
(BI471466) sag20g10.y1 Gm-c1080 Glycine max cDNA clone GENOM... 44 0.99 1
(AA661227) MB3D6V4D04T3 Brugia malayi day 6 post-infection t... 44 0.99 1
(BF708065) A756_LE Aplysia metacerebral cell cDNA library Ap... 44 0.99 1
(GD200383) G1045P347FC9.T1 Aplysia californica Pooled Normal... 44 0.99 1
(FE689448) Pv012B_M13R_F06.ab1 Phaseolus vulgaris cv Early g... 44 0.99 1
(FE689447) Pv012B_M13F_F06.ab1 Phaseolus vulgaris cv Early g... 44 0.99 1
(FE689446) Pv055D_M13R_B01.ab1 Phaseolus vulgaris cv Early g... 44 0.99 1
(FE689445) Pv055D_M13F_B01.ab1 Phaseolus vulgaris cv Early g... 44 0.99 1
(FE082500) LV_GL_RA22B01r Litopenaeus vannamei gills cDNA li... 44 0.99 1
(FE082499) LV_GL_RA22M23r Litopenaeus vannamei gills cDNA li... 44 0.99 1
(FD354912) CBPN32938.b1 CBPN: Subtracted channel catfish cDN... 44 0.99 1
(EY351436) CAWZ18121.rev CAWZ Helobdella robusta Primary Lat... 44 0.99 1
(EY350682) CAWZ17723.rev CAWZ Helobdella robusta Primary Lat... 44 0.99 1
(EY320281) CAWX7309.rev CAWX Helobdella robusta Primary Earl... 44 0.99 1
(EY318266) CAWX6295.rev CAWX Helobdella robusta Primary Earl... 44 0.99 1
(EY311152) CAWX23312.rev CAWX Helobdella robusta Primary Ear... 44 0.99 1
(EY296916) CAWX13077.rev CAWX Helobdella robusta Primary Ear... 44 0.99 1
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 44 0.99 1
(CU928764) Zebrafish DNA sequence from clone CH73-359B13 in ... 42 3.9 1
(CU896660) Zebrafish DNA sequence from clone CH1073-411A17 i... 42 3.9 1
(CU571334) Zebrafish DNA sequence from clone CH73-91P12 in l... 42 3.9 1
(CU571159) Zebrafish DNA sequence from clone CH73-137H6 in l... 42 3.9 1
(CU468254) Zebrafish DNA sequence from clone CH73-374J3 in l... 42 3.9 1
(CU467939) Zebrafish DNA sequence from clone CH211-133L8 in ... 42 3.9 1
(CT737172) Zebrafish DNA sequence from clone DKEY-284O11 in ... 42 3.9 1
(CT027677) Zebrafish DNA sequence from clone DKEY-84O3 in li... 42 3.9 1
(CT025754) Zebrafish DNA sequence from clone DKEYP-24H9 in l... 42 3.9 1
(CR931819) Zebrafish DNA sequence from clone DKEY-69P21 in l... 42 3.9 1
(CR847808) Zebrafish DNA sequence from clone CH211-151I8 in ... 42 3.9 1
(CR847788) Zebrafish DNA sequence from clone CH211-249H16 in... 42 3.9 1
(CR536614) Zebrafish DNA sequence from clone CH211-154E6 in ... 42 3.9 1
(CR450808) Zebrafish DNA sequence from clone DKEYP-55H4 in l... 42 3.9 1
(CR450725) Zebrafish DNA sequence from clone CH211-5A14 in l... 42 3.9 1
(CR450685) Zebrafish DNA sequence from clone DKEY-83K24 in l... 42 3.9 1
(CR396587) Zebrafish DNA sequence from clone CH211-261P15 in... 42 3.9 1
(CR394522) Zebrafish DNA sequence from clone DKEY-159D6 in l... 42 3.9 1
(CR391944) Zebrafish DNA sequence from clone CH211-95K19 in ... 42 3.9 1
(CR388406) Zebrafish DNA sequence from clone CH211-288H2 in ... 42 3.9 1
(CR387930) Zebrafish DNA sequence from clone CH211-69P15 in ... 42 3.9 1
(CR376853) Zebrafish DNA sequence from clone CH211-198N7 in ... 42 3.9 1
(CR352251) Zebrafish DNA sequence from clone CH211-138M21 in... 42 3.9 1
(BX957239) Zebrafish DNA sequence from clone DKEY-173N20 in ... 42 3.9 1
(BX942824) Zebrafish DNA sequence from clone CH211-205D4 in ... 42 3.9 1
(BX936406) Zebrafish DNA sequence from clone DKEY-13K17 in l... 42 3.9 1
(BX936392) Zebrafish DNA sequence from clone CH211-197O16 in... 42 3.9 1
(BX928740) Zebrafish DNA sequence from clone CH211-245J22 in... 42 3.9 1
(BX927402) Zebrafish DNA sequence from clone CH211-262G12 in... 42 3.9 1
(BX927356) Zebrafish DNA sequence from clone DKEY-54K20 in l... 42 3.9 1
(BX908742) Zebrafish DNA sequence from clone DKEY-246G23 in ... 42 3.9 1
(BX897729) Zebrafish DNA sequence from clone DKEY-240A12 in ... 42 3.9 1
(BX890575) Zebrafish DNA sequence from clone CH211-235C4 in ... 42 3.9 1
(BX842614) Zebrafish DNA sequence from clone DKEY-76I15 in l... 42 3.9 1
(BX842571) Zebrafish DNA sequence from clone DKEY-16G11 in l... 42 3.9 1
(BX649544) Zebrafish DNA sequence from clone CH211-123F23 in... 42 3.9 1
(BX649386) Zebrafish DNA sequence from clone RP71-18A24 in l... 42 3.9 1
(BX649299) Zebrafish DNA sequence from clone CH211-209E14 in... 42 3.9 1
(BX640462) Zebrafish DNA sequence from clone CH211-153D8 in ... 42 3.9 1
(BX571825) Zebrafish DNA sequence from clone DKEY-158E13 in ... 42 3.9 1
(BX571802) Zebrafish DNA sequence from clone CH211-197A16 in... 42 3.9 1
(BX548246) Zebrafish DNA sequence from clone CH211-274P15 in... 42 3.9 1
(BX547996) Zebrafish DNA sequence from clone CH211-212H16 in... 42 3.9 1
(BX546493) Zebrafish DNA sequence from clone RP71-34B19. 42 3.9 1
(BX545856) Zebrafish DNA sequence from clone DKEY-216E24 in ... 42 3.9 1
(BX511310) Zebrafish DNA sequence from clone DKEY-274M14 in ... 42 3.9 1
(BX511138) Zebrafish DNA sequence from clone DKEYP-52D3 in l... 42 3.9 1
(BX324006) Zebrafish DNA sequence from clone DKEY-46M10 in l... 42 3.9 1
(BX323888) Zebrafish DNA sequence from clone CH211-134G21 in... 42 3.9 1
(BX322551) Zebrafish DNA sequence from clone DKEYP-34F6 in l... 42 3.9 1
(BX321898) Zebrafish DNA sequence from clone DKEYP-34C12 in ... 42 3.9 1
(BX294444) Zebrafish DNA sequence from clone CH211-281E15 in... 42 3.9 1
(BX276106) Zebrafish DNA sequence from clone DKEY-1N18 in li... 42 3.9 1
(BX248106) Zebrafish DNA sequence from clone CH211-123P13 in... 42 3.9 1
(BX085194) Zebrafish DNA sequence from clone DKEY-242M13 in ... 42 3.9 1
(BX005417) Zebrafish DNA sequence from clone DKEY-240N22 in ... 42 3.9 1
(BX005027) Zebrafish DNA sequence from clone DKEY-4C2 in lin... 42 3.9 1
(BX004970) Zebrafish DNA sequence from clone DKEY-9I4. 42 3.9 1
(BX004821) Zebrafish DNA sequence from clone CH211-171A11 in... 42 3.9 1
(BX000701) Zebrafish DNA sequence from clone CH211-18I3 in l... 42 3.9 1
(AL954652) Zebrafish DNA sequence from clone CH211-239O15 in... 42 3.9 1
(AL935316) Zebrafish DNA sequence from clone CH211-239C9 in ... 42 3.9 1
(AL935290) Zebrafish DNA sequence from clone CH211-270H11. 42 3.9 1
(AL935062) Zebrafish DNA sequence from clone CH211-231F23 in... 42 3.9 1
(AL929078) Zebrafish DNA sequence from clone CH211-155I15 in... 42 3.9 1
(AL928975) Zebrafish DNA sequence from clone CH211-133N4 in ... 42 3.9 1
(AL928954) Zebrafish DNA sequence from clone CH211-127D4 in ... 42 3.9 1
(AL772314) Zebrafish DNA sequence from clone DKEY-89B17 in l... 42 3.9 1
(AL731861) Zebrafish DNA sequence from clone BUSM1-46I22 in ... 42 3.9 1
(AL672166) Zebrafish DNA sequence from clone XX-134G18. 42 3.9 1
(AL672161) Zebrafish DNA sequence from clone BUSM1-1I3 in li... 42 3.9 1
(AC145979) Gallus gallus BAC clone CH261-10P22 from chromoso... 42 3.9 1
(GF093243) 15381 Glycine max young leaves DNA Glycine max ST... 42 3.9 1
(BV069481) S212P6363FH9.T0 CZECHII/Ei Mus musculus STS genom... 42 3.9 1
(BC049932) Mus musculus, clone IMAGE:5388015, mRNA. 42 3.9 1
(AL928868) Mouse DNA sequence from clone RP23-428O15 on chro... 42 3.9 1
(AL732572) Mouse DNA sequence from clone RP23-32C16 on chrom... 42 3.9 1
(AL669950) Mouse DNA sequence from clone RP23-14C19 on chrom... 42 3.9 1
(AL669948) Mouse DNA sequence from clone RP23-248K2 on chrom... 42 3.9 1
(AF490345) Mus musculus DPPA1 mRNA, complete cds. 42 3.9 1
(AC200894) Mus musculus BAC clone CH36-181O11 from chromosom... 42 3.9 1
(AC167811) Mus musculus BAC clone RP24-286L8 from chromosome... 42 3.9 1
(AC161765) Mus musculus BAC clone RP23-85I5 from chromosome ... 42 3.9 1
(AC157659) Mus musculus BAC clone RP23-275J9 from chromosome... 42 3.9 1
(AC155163) Mus musculus BAC clone RP24-341A18 from chromosom... 42 3.9 1
(AC142450) Mus musculus BAC clone RP24-425G6 from 8, complet... 42 3.9 1
(AC142191) Mus musculus BAC clone RP24-530N5 from 6, complet... 42 3.9 1
(AC124711) Mus musculus BAC clone RP24-100M12 from 12, compl... 42 3.9 1
(AC124580) Mus musculus BAC clone RP23-114G7 from chromosome... 42 3.9 1
(AC115118) Mus musculus BAC clone RP23-84N24 from 5, complet... 42 3.9 1
(AC114622) Mus musculus chromosome 5, clone RP24-103L18, com... 42 3.9 1
(AC099415) Mus musculus BAC clone RP23-122D8 from chromosome... 42 3.9 1
(AC091106) Mus musculus chromosome 6, clone RP23-103L13, com... 42 3.9 1
(AC192115) Pan troglodytes BAC clone CH251-703C4 from chromo... 42 3.9 1
(AC188424) Pan troglodytes BAC clone CH251-377L23 from chrom... 42 3.9 1
(AC183838) Pan troglodytes BAC clone CH251-11K10 from chromo... 42 3.9 1
(AC183598) Pan troglodytes BAC clone CH251-455P14 from chrom... 42 3.9 1
(AC147068) Pan troglodytes BAC clone RP43-165E11 from chromo... 42 3.9 1
(AC146089) Pan troglodytes BAC clone RP43-47D18 from chromos... 42 3.9 1
(AB439578) Lemur catta SFTPB gene for surfactant pulmonary-a... 42 3.9 1
(CU468858) M.truncatula DNA sequence from clone MTH2-1I20 on... 42 3.9 1
(CU234178) M.truncatula DNA sequence from clone MTH2-62F5 on... 42 3.9 1
(AY224189) Medicago truncatula adenosylhomocysteinase (AHC2)... 42 3.9 1
(AP002049) Arabidopsis thaliana genomic DNA, chromosome 3, P... 42 3.9 1
(AM481377) Vitis vinifera contig VV78X024551.8, whole genome... 42 3.9 1
(AM465908) Vitis vinifera contig VV78X255096.3, whole genome... 42 3.9 1
(AM465698) Vitis vinifera contig VV78X006645.3, whole genome... 42 3.9 1
(AM460118) Vitis vinifera contig VV78X180007.4, whole genome... 42 3.9 1
(AM455596) Vitis vinifera, whole genome shotgun sequence, co... 42 3.9 1
(AM449730) Vitis vinifera, whole genome shotgun sequence, co... 42 3.9 1
(AM445885) Vitis vinifera, whole genome shotgun sequence, co... 42 3.9 1
(AM440136) Vitis vinifera contig VV78X114369.5, whole genome... 42 3.9 1
(AM433330) Vitis vinifera contig VV78X081771.9, whole genome... 42 3.9 1
(AM430678) Vitis vinifera contig VV78X234028.23, whole genom... 42 3.9 1
(AM428166) Vitis vinifera contig VV78X060246.3, whole genome... 42 3.9 1
(AM426479) Vitis vinifera contig VV78X045907.10, whole genom... 42 3.9 1
(AM423518) Vitis vinifera contig VV78X241361.6, whole genome... 42 3.9 1
(AC157892) Medicago truncatula chromosome 7 BAC clone mte1-8... 42 3.9 1
(AB444399) Ipomoea batatas IbMYB1 pseudogene for IbMYB1, cul... 42 3.9 1
(AB444398) Ipomoea batatas IbMYB1 gene for transcription fac... 42 3.9 1
(AB444397) Ipomoea batatas IbMYB1 gene for transcription fac... 42 3.9 1
(EA048110) Sequence 1 from patent US 7154021. 42 3.9 1
(DJ386558) Diagnosis of Diseases Associated with Metastasis. 42 3.9 1
(DI147804) GENOME SEQUENCE OF ZYMONAS MOBILIS ZM4 AND NOVEL ... 42 3.9 1
(CQ593966) Sequence 21724 from Patent WO0171042. 42 3.9 1
(BD452807) Diagnosis of Diseases Associated with tumor suppr... 42 3.9 1
(AX345251) Sequence 322 from Patent WO0200928. 42 3.9 1
(AX281354) Sequence 18 from Patent WO0177376. 42 3.9 1
(AX251286) Sequence 254 from Patent WO0168912. 42 3.9 1
(AX196294) Sequence 1 from Patent WO0151627. 42 3.9 1
(GP062383) Sequence 1 from patent US 7485770. 42 3.9 1
(GC697664) Sequence 12909 from patent US 6812339. 42 3.9 1
(AC147681) Canis Familiaris, clone XX-10A1, complete sequence. 42 3.9 1
(AC122153) Oryctolagus cuniculus clone LB1-9L8, complete seq... 42 3.9 1
(U61951) Caenorhabditis elegans cosmid C48A7, complete seque... 42 3.9 1
(EU477641) Brachytron pratense 12S ribosomal RNA, tRNA-Val, ... 42 3.9 1
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s... 42 3.9 1
(AF266067) Brachytron pratense large subunit ribosomal RNA g... 42 3.9 1
(AF125446) Caenorhabditis elegans cosmid R05C11, complete se... 42 3.9 1
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2... 42 3.9 1
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 42 3.9 1
(AE014297) Drosophila melanogaster chromosome 3R, complete s... 42 3.9 1
(AE014135) Drosophila melanogaster chromosome 4, complete se... 42 3.9 1
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 42 3.9 1
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 42 3.9 1
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 42 3.9 1
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 42 3.9 1
(AC084046) Trypanosoma brucei chromosome 6 clone RPCI93-3D8,... 42 3.9 1
(AC073906) Trypanosoma brucei chromosome 6 clone RPCI93-3A7,... 42 3.9 1
(AC010841) Drosophila melanogaster clone BACN05O16, complete... 42 3.9 1
(AC008144) Drosophila melanogaster, chromosome 3R, region 93... 42 3.9 1
(AY388614) Homo sapiens polymerase (DNA directed), eta (POLH... 42 3.9 1
(AY337315) Homo sapiens surfactant, pulmonary-associated pro... 42 3.9 1
(AY090568) Homo sapiens pulmonary surfactant protein C gene,... 42 3.9 1
(AP003970) Homo sapiens genomic DNA, chromosome 11 clone:RP1... 42 3.9 1
(AL592075) Human DNA sequence from clone RP11-778O10 on chro... 42 3.9 1
(AL590434) Human DNA sequence from clone RP11-181E22 on chro... 42 3.9 1
(AL512429) Human DNA sequence from clone RP11-429C3 on chrom... 42 3.9 1
(AL451130) Human DNA sequence from clone RP11-10G21 on chrom... 42 3.9 1
(AL353602) Human DNA sequence from clone RP11-22I24 on chrom... 42 3.9 1
(AL132985) Human chromosome 14 DNA sequence BAC R-1103G16 of... 42 3.9 1
(AL079305) Human chromosome 14 DNA sequence BAC R-306B9 of l... 42 3.9 1
(AL049833) Human chromosome 14 DNA sequence BAC R-907D1 of l... 42 3.9 1
(AC123512) Homo sapiens 12 BAC RP11-24B21 (Roswell Park Canc... 42 3.9 1
(AC117411) Homo sapiens 3 BAC RP11-55O2 (Roswell Park Cancer... 42 3.9 1
(AC110989) Homo sapiens 3q BAC RP11-15M16 (Roswell Park Canc... 42 3.9 1
(AC108051) Homo sapiens BAC clone RP11-332D2 from 2, complet... 42 3.9 1
(AC105206) Homo sapiens chromosome 8, clone CTD-2530N21, com... 42 3.9 1
(AC105141) Homo sapiens chromosome 8, clone CTD-3110J21, com... 42 3.9 1
(AC090231) Homo sapiens chromosome 18, clone RP11-834I3, com... 42 3.9 1
(AC069133) Homo sapiens BAC clone RP11-579E24 from 8, comple... 42 3.9 1
(AC068863) Homo sapiens chromosome 2, clone CTD-2170C4, comp... 42 3.9 1
(AC062020) Homo sapiens BAC clone RP11-154O23 from 2, comple... 42 3.9 1
(AC046144) Homo sapiens 3 BAC RP11-628J14 (Roswell Park Canc... 42 3.9 1
(AC026749) Homo sapiens chromosome 5 clone RP11-415K6, compl... 42 3.9 1
(AC026348) Homo sapiens 3 BAC RP11-553D4 (Roswell Park Cance... 42 3.9 1
(AC026118) Homo sapiens 3 BAC RP11-67F24 (Roswell Park Cance... 42 3.9 1
(AC019041) Homo sapiens BAC clone RP11-4K20 from 2, complete... 42 3.9 1
(AC018361) Homo sapiens 3 BAC RP11-41O13 (Roswell Park Cance... 42 3.9 1
(AC016656) Homo sapiens chromosome 5 clone RPCI-1_4M11, comp... 42 3.9 1
(AC016652) Homo sapiens chromosome 5 clone RPCI-1_29O12, com... 42 3.9 1
(AC012148) Homo sapiens chromosome 18, clone RP11-128L12, co... 42 3.9 1
(AC010627) Homo sapiens chromosome 5 clone CTD-2165H16, comp... 42 3.9 1
(AC010370) Homo sapiens chromosome 3 clone CTD-2049J23, comp... 42 3.9 1
(AC009362) Homo sapiens chromosome 7 clone RP11-256C6, compl... 42 3.9 1
(AC007068) Homo sapiens 12p BAC RPCI11-75L1 (Roswell Park Ca... 42 3.9 1
(AC004872) Homo sapiens PAC clone RP4-742N3 from 7, complete... 42 3.9 1
(AC004031) Homo sapiens 12q24 PAC RPCI1-261P5 (Roswell Park ... 42 3.9 1
(AC160719) Callicebus moloch clone LB5-403J13, WORKING DRAFT... 42 3.9 1
(AC159865) Bos taurus clone CH240-72H6, WORKING DRAFT SEQUEN... 42 3.9 1
(AC155919) Medicago truncatula chromosome 6 clone mth2-119h1... 42 3.9 1
(AC152442) Bos taurus clone CH240-7A13, WORKING DRAFT SEQUEN... 42 3.9 1
(AC152209) Bos taurus clone CH240-1L22, WORKING DRAFT SEQUEN... 42 3.9 1
(AC151898) Mus musculus chromosome 8 clone RP24-130A21, WORK... 42 3.9 1
(AC151519) Danio rerio clone 156F13, WORKING DRAFT SEQUENCE,... 42 3.9 1
(AC150378) Callithrix jacchus clone CH259-238G15, WORKING DR... 42 3.9 1
(AC149837) Otolemur garnettii clone CH256-300F22, WORKING DR... 42 3.9 1
(AC149002) Otolemur garnettii clone CH256-249L24, WORKING DR... 42 3.9 1
(AC148615) Ictalurus punctatus clone CH212-99A22, WORKING DR... 42 3.9 1
(AC148520) Sorex araneus clone SA_Ba-320O2, WORKING DRAFT SE... 42 3.9 1
(AC148277) Sorex araneus clone SA_Ba-393H17, WORKING DRAFT S... 42 3.9 1
(AC145044) Bos taurus clone RP42-23K1, WORKING DRAFT SEQUENC... 42 3.9 1
(AC144744) Danio rerio strain Tue clone CH211-24E24, WORKING... 42 3.9 1
(AC143935) Macaca mulatta clone CH250-270F17, *** SEQUENCING... 42 3.9 1
(AC141996) Rattus norvegicus clone CH230-292G13, *** SEQUENC... 42 3.9 1
(AC140731) Rattus norvegicus clone CH230-414F12, *** SEQUENC... 42 3.9 1

>(CU467645) Zebrafish DNA sequence from clone DKEY-16P14 in linkage
group 14.
Length = 49927

Score = 48.1 bits (24), Expect = 0.063
Identities = 24/24 (100%)
Strand = Plus / Minus


Query: 82 gtaaataattaaataaataaaaaa 105
||||||||||||||||||||||||
Sbjct: 8541 gtaaataattaaataaataaaaaa 8518

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 78,655,344
Number of extensions: 12386567
Number of successful extensions: 6249887
Number of sequences better than 10.0: 869
Length of query: 116
Length of database: 101,790,757,118
Length adjustment: 22
Effective length of query: 94
Effective length of database: 99,544,435,898
Effective search space: 9357176974412
Effective search space used: 9357176974412
X1: 11 (21.8 bits)
S2: 20 (40.1 bits)

protein update 2009. 7.22
Homology vs Protein
Query= Contig-U03207-1 (Contig-U03207-1Q) /CSM_Contig/Contig-U03207-1Q.Seq.d
(116 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

***** No hits found ******

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 61,190,683
Number of extensions: 259453
Number of successful extensions: 138
Number of sequences better than 10.0: 0
Number of HSP's gapped: 138
Number of HSP's successfully gapped: 0
Length of query: 38
Length of database: 1,051,180,864
Length adjustment: 12
Effective length of query: 26
Effective length of database: 1,012,342,156
Effective search space: 26320896056
Effective search space used: 26320896056
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 24 (13.9 bits)

PSORT -
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0